BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00020446
         (395 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006841200.1| hypothetical protein AMTR_s00334p00015220 [A...   126   3e-27
ref|XP_003599571.1| Photosystem I assembly protein Ycf3 [Medicag...   124   1e-26
ref|XP_003620942.1| Photosystem I assembly protein Ycf3 [Medicag...   122   4e-26
ref|XP_003605620.1| Photosystem I assembly protein Ycf3 [Medicag...   121   1e-25
pir||A05190 hypothetical protein 77 - common tobacco chloroplast...   117   2e-24
ref|YP_006503792.1| photosystem I assembly protein Ycf3 (chlorop...   103   3e-20
ref|XP_002334707.1| predicted protein [Populus trichocarpa] gi|2...   103   3e-20
gb|EPS73911.1| hypothetical protein M569_00846 [Genlisea aurea]       101   9e-20
ref|YP_008999936.1| hypothetical chloroplast RF34 (chloroplast) ...   100   2e-19
ref|YP_008963481.1| hypothetical chloroplast RF34 (chloroplast) ...   100   2e-19
ref|YP_008963396.1| hypothetical chloroplast RF34 (chloroplast) ...   100   2e-19
gb|AFK81300.1| hypothetical chloroplast RF34 [Camellia sinensis ...   100   2e-19
gb|AGW04976.1| photosystem I assembly protein [Vincetoxicum ross...   100   2e-19
gb|AGW04519.1| photosystem I assembly protein [Eustegia minuta]       100   2e-19
ref|YP_008592489.1| photosystem I assembly protein Ycf3 (chlorop...   100   2e-19
gb|AGQ50350.1| hypothetical chloroplast RF34 (chloroplast) [Rume...   100   2e-19
ref|YP_007890374.1| hypothetical chloroplast RF34 (chloroplast) ...   100   2e-19
ref|YP_005089335.1| ycf3 gene product (chloroplast) [Silene vulg...   100   2e-19
gb|ADM92750.1| putative RF3 protein [Davidia involucrata]             100   2e-19
ref|YP_008578540.1| photosystem I assembly protein (chloroplast)...   100   2e-19

>ref|XP_006841200.1| hypothetical protein AMTR_s00334p00015220 [Amborella trichopoda]
           gi|548843107|gb|ERN02875.1| hypothetical protein
           AMTR_s00334p00015220 [Amborella trichopoda]
          Length = 70

 Score =  126 bits (316), Expect = 3e-27
 Identities = 60/67 (89%), Positives = 61/67 (91%)
 Frame = +2

Query: 191 MR*ETLKYGSKGRN*PTYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAH 370
           MR ETLKYGSKGRN   YSDRGEQAIRQGDSEIAEAWFDQAAEYWKQA+ LTPGNYIEA 
Sbjct: 1   MRSETLKYGSKGRNLSAYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQALALTPGNYIEAQ 60

Query: 371 NWLKITR 391
           NWLKITR
Sbjct: 61  NWLKITR 67


>ref|XP_003599571.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
           gi|355488619|gb|AES69822.1| Photosystem I assembly
           protein Ycf3 [Medicago truncatula]
          Length = 160

 Score =  124 bits (312), Expect = 1e-26
 Identities = 60/67 (89%), Positives = 61/67 (91%)
 Frame = +2

Query: 188 RMR*ETLKYGSKGRN*PTYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEA 367
           RM  ETLKYGSKGRN  TYSDRGEQAIRQGDSEIAE+WFDQAAEYWKQAI LTPGNYIEA
Sbjct: 90  RMSQETLKYGSKGRNLLTYSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEA 149

Query: 368 HNWLKIT 388
            NWLKIT
Sbjct: 150 QNWLKIT 156


>ref|XP_003620942.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
           gi|355495957|gb|AES77160.1| Photosystem I assembly
           protein Ycf3 [Medicago truncatula]
          Length = 70

 Score =  122 bits (307), Expect = 4e-26
 Identities = 58/63 (92%), Positives = 59/63 (93%)
 Frame = +2

Query: 200 ETLKYGSKGRN*PTYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWL 379
           ETLKYGSKGRN  TYSDRGEQAIRQGDSEIAE+WFDQAAEYWKQAI LTPGNYIEA NWL
Sbjct: 4   ETLKYGSKGRNLLTYSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWL 63

Query: 380 KIT 388
           KIT
Sbjct: 64  KIT 66


>ref|XP_003605620.1| Photosystem I assembly protein Ycf3 [Medicago truncatula]
           gi|355506675|gb|AES87817.1| Photosystem I assembly
           protein Ycf3 [Medicago truncatula]
          Length = 201

 Score =  121 bits (303), Expect = 1e-25
 Identities = 59/67 (88%), Positives = 60/67 (89%)
 Frame = +2

Query: 188 RMR*ETLKYGSKGRN*PTYSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEA 367
           RM  ETLKYGSKGRN  T SDRGEQAIRQGDSEIAE+WFDQAAEYWKQAI LTPGNYIEA
Sbjct: 131 RMSQETLKYGSKGRNLLTNSDRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEA 190

Query: 368 HNWLKIT 388
            NWLKIT
Sbjct: 191 QNWLKIT 197


>pir||A05190 hypothetical protein 77 - common tobacco chloroplast
           gi|225199|prf||1211235AD ORF 77
          Length = 77

 Score =  117 bits (292), Expect = 2e-24
 Identities = 61/77 (79%), Positives = 65/77 (84%)
 Frame = -2

Query: 370 MRFNIITRSKRYSLFPILSGLIEPSFRYFRISLSNGLFSPVGIGRSIPSLRTVLESFLPH 191
           MRFNIIT SKRYSLFPILSGLIEPS   FRISL NGLFSP GIG SIPSLRTVLE+FLPH
Sbjct: 1   MRFNIITGSKRYSLFPILSGLIEPSLCNFRISLLNGLFSPAGIGSSIPSLRTVLENFLPH 60

Query: 190 TAQQSIPLVLRFNQFDL 140
           TAQQSI LV  F+ + +
Sbjct: 61  TAQQSILLVSHFDLYHI 77


>ref|YP_006503792.1| photosystem I assembly protein Ycf3 (chloroplast) [Datura
           stramonium] gi|350996427|gb|AEQ36939.1| photosystem I
           assembly protein Ycf3 (chloroplast) [Datura stramonium]
           gi|350996579|gb|AEQ37090.1| photosystem I assembly
           protein Ycf3 [Datura stramonium]
          Length = 170

 Score =  103 bits (256), Expect = 3e-20
 Identities = 47/50 (94%), Positives = 48/50 (96%)
 Frame = +2

Query: 242 YSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKITR 391
           YS RGEQAI+QGDSEIAEAWFDQAAEYWKQAI LTPGNYIEAHNWLKITR
Sbjct: 118 YSGRGEQAIQQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITR 167


>ref|XP_002334707.1| predicted protein [Populus trichocarpa]
           gi|224119468|ref|XP_002331237.1| predicted protein
           [Populus trichocarpa]
          Length = 55

 Score =  103 bits (256), Expect = 3e-20
 Identities = 47/50 (94%), Positives = 49/50 (98%)
 Frame = +2

Query: 242 YSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKITR 391
           +SDRGEQAIRQGDS+IAEAWFDQAAEYWKQAITLTPGNYIEA NWLKITR
Sbjct: 3   FSDRGEQAIRQGDSKIAEAWFDQAAEYWKQAITLTPGNYIEAQNWLKITR 52


>gb|EPS73911.1| hypothetical protein M569_00846 [Genlisea aurea]
          Length = 163

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/50 (92%), Positives = 47/50 (94%)
 Frame = +2

Query: 242 YSDRGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKITR 391
           YSDRGEQAIRQGDSEIAE WFDQAA+YWKQAI LTPGNYIEA NWLKITR
Sbjct: 111 YSDRGEQAIRQGDSEIAEVWFDQAAQYWKQAIALTPGNYIEAQNWLKITR 160


>ref|YP_008999936.1| hypothetical chloroplast RF34 (chloroplast) [Agrostemma githago]
           gi|576312302|ref|YP_009000186.1| hypothetical
           chloroplast RF34 (chloroplast) [Silene paradoxa]
           gi|555944022|gb|AGZ17926.1| hypothetical chloroplast
           RF34 (chloroplast) [Agrostemma githago]
           gi|555944275|gb|AGZ18176.1| hypothetical chloroplast
           RF34 (chloroplast) [Silene paradoxa]
          Length = 168

 Score =  100 bits (250), Expect = 2e-19
 Identities = 46/46 (100%), Positives = 46/46 (100%)
 Frame = +2

Query: 251 RGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKIT 388
           RGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKIT
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKIT 164


>ref|YP_008963481.1| hypothetical chloroplast RF34 (chloroplast) [Penthorum chinense]
           gi|403226782|gb|AFR25661.1| hypothetical chloroplast
           RF34 (chloroplast) [Penthorum chinense]
          Length = 169

 Score =  100 bits (250), Expect = 2e-19
 Identities = 46/47 (97%), Positives = 46/47 (97%)
 Frame = +2

Query: 251 RGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKITR 391
           RGEQAIRQGDSEIAEAWFDQAAEYWKQAI LTPGNYIEAHNWLKITR
Sbjct: 120 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITR 166


>ref|YP_008963396.1| hypothetical chloroplast RF34 (chloroplast) [Sedum sarmentosum]
           gi|402797531|gb|AFQ99063.1| hypothetical chloroplast
           RF34 (chloroplast) [Sedum sarmentosum]
          Length = 169

 Score =  100 bits (250), Expect = 2e-19
 Identities = 46/47 (97%), Positives = 46/47 (97%)
 Frame = +2

Query: 251 RGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKITR 391
           RGEQAIRQGDSEIAEAWFDQAAEYWKQAI LTPGNYIEAHNWLKITR
Sbjct: 120 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITR 166


>gb|AFK81300.1| hypothetical chloroplast RF34 [Camellia sinensis var. assamica]
          Length = 168

 Score =  100 bits (250), Expect = 2e-19
 Identities = 46/47 (97%), Positives = 46/47 (97%)
 Frame = +2

Query: 251 RGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKITR 391
           RGEQAIRQGDSEIAEAWFDQAAEYWKQAI LTPGNYIEAHNWLKITR
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITR 165


>gb|AGW04976.1| photosystem I assembly protein [Vincetoxicum rossicum]
          Length = 168

 Score =  100 bits (250), Expect = 2e-19
 Identities = 46/47 (97%), Positives = 46/47 (97%)
 Frame = +2

Query: 251 RGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKITR 391
           RGEQAIRQGDSEIAEAWFDQAAEYWKQAI LTPGNYIEAHNWLKITR
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITR 165


>gb|AGW04519.1| photosystem I assembly protein [Eustegia minuta]
          Length = 168

 Score =  100 bits (250), Expect = 2e-19
 Identities = 46/47 (97%), Positives = 46/47 (97%)
 Frame = +2

Query: 251 RGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKITR 391
           RGEQAIRQGDSEIAEAWFDQAAEYWKQAI LTPGNYIEAHNWLKITR
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITR 165


>ref|YP_008592489.1| photosystem I assembly protein Ycf3 (chloroplast) [Andrographis
           paniculata] gi|532164837|gb|AGT79847.1| photosystem I
           assembly protein Ycf3 (chloroplast) [Andrographis
           paniculata]
          Length = 168

 Score =  100 bits (250), Expect = 2e-19
 Identities = 46/47 (97%), Positives = 46/47 (97%)
 Frame = +2

Query: 251 RGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKITR 391
           RGEQAIRQGDSEIAEAWFDQAAEYWKQAI LTPGNYIEAHNWLKITR
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITR 165


>gb|AGQ50350.1| hypothetical chloroplast RF34 (chloroplast) [Rumex acetosa]
          Length = 169

 Score =  100 bits (250), Expect = 2e-19
 Identities = 46/47 (97%), Positives = 46/47 (97%)
 Frame = +2

Query: 251 RGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKITR 391
           RGEQAIRQGDSEIAEAWFDQAAEYWKQAI LTPGNYIEAHNWLKITR
Sbjct: 120 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITR 166


>ref|YP_007890374.1| hypothetical chloroplast RF34 (chloroplast) [Ardisia polysticta]
           gi|456367971|gb|AGG36885.1| hypothetical chloroplast
           RF34 (chloroplast) [Ardisia polysticta]
          Length = 169

 Score =  100 bits (250), Expect = 2e-19
 Identities = 46/47 (97%), Positives = 46/47 (97%)
 Frame = +2

Query: 251 RGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKITR 391
           RGEQAIRQGDSEIAEAWFDQAAEYWKQAI LTPGNYIEAHNWLKITR
Sbjct: 120 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITR 166


>ref|YP_005089335.1| ycf3 gene product (chloroplast) [Silene vulgaris]
           gi|374249789|ref|YP_005089418.1| ycf3 gene product
           (chloroplast) [Silene noctiflora]
           gi|374249878|ref|YP_005089506.1| ycf3 gene product
           (chloroplast) [Silene conica]
           gi|374249951|ref|YP_005089578.1| ycf3 gene product
           (chloroplast) [Silene latifolia]
           gi|575925640|ref|YP_009000025.1| hypothetical
           chloroplast RF34 (chloroplast) [Silene conoidea]
           gi|329755449|gb|AEC04013.1| hypothetical chloroplast
           RF34 (chloroplast) [Silene conica]
           gi|329755522|gb|AEC04085.1| hypothetical chloroplast
           RF34 (chloroplast) [Silene latifolia]
           gi|329755606|gb|AEC04168.1| hypothetical chloroplast
           RF34 (chloroplast) [Silene noctiflora]
           gi|329755687|gb|AEC04248.1| hypothetical chloroplast
           RF34 (chloroplast) [Silene vulgaris]
           gi|555944112|gb|AGZ18015.1| hypothetical chloroplast
           RF34 (chloroplast) [Silene conoidea]
          Length = 168

 Score =  100 bits (250), Expect = 2e-19
 Identities = 46/46 (100%), Positives = 46/46 (100%)
 Frame = +2

Query: 251 RGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKIT 388
           RGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKIT
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKIT 164


>gb|ADM92750.1| putative RF3 protein [Davidia involucrata]
          Length = 161

 Score =  100 bits (250), Expect = 2e-19
 Identities = 46/47 (97%), Positives = 46/47 (97%)
 Frame = +2

Query: 251 RGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKITR 391
           RGEQAIRQGDSEIAEAWFDQAAEYWKQAI LTPGNYIEAHNWLKITR
Sbjct: 113 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITR 159


>ref|YP_008578540.1| photosystem I assembly protein (chloroplast) [Asclepias nivea]
           gi|545907193|ref|YP_008578625.1| photosystem I assembly
           protein (chloroplast) [Asclepias syriaca]
           gi|326200282|gb|ADZ52321.1| photosystem I assembly
           protein [Asclepias syriaca] gi|355331725|gb|AER52414.1|
           photosystem I assembly protein [Asclepias albicans]
           gi|355331808|gb|AER52496.1| photosystem I assembly
           protein [Asclepias albicans] gi|355331974|gb|AER52660.1|
           photosystem I assembly protein [Asclepias cutleri]
           gi|355332057|gb|AER52742.1| photosystem I assembly
           protein [Asclepias cutleri] gi|355332139|gb|AER52823.1|
           photosystem I assembly protein [Asclepias leptopus]
           gi|355332382|gb|AER53063.1| photosystem I assembly
           protein [Asclepias masonii] gi|355332465|gb|AER53145.1|
           photosystem I assembly protein [Asclepias subaphylla]
           gi|355332548|gb|AER53227.1| photosystem I assembly
           protein [Asclepias subaphylla]
           gi|355332627|gb|AER53305.1| photosystem I assembly
           protein [Asclepias subulata] gi|355332710|gb|AER53387.1|
           photosystem I assembly protein [Asclepias subulata]
           gi|355332793|gb|AER53469.1| photosystem I assembly
           protein [Asclepias albicans x Asclepias subulata]
           gi|544186340|gb|AGW04288.1| photosystem I assembly
           protein [Secamone afzelii] gi|544186418|gb|AGW04365.1|
           photosystem I assembly protein [Araujia sericifera]
           gi|544186496|gb|AGW04442.1| photosystem I assembly
           protein [Astephanus triflorus]
           gi|544186647|gb|AGW04591.1| photosystem I assembly
           protein [Marsdenia astephanoides]
           gi|544186803|gb|AGW04745.1| photosystem I assembly
           protein [Orthosia scoparia] gi|544187109|gb|AGW05047.1|
           photosystem I assembly protein (chloroplast) [Asclepias
           nivea] gi|544187210|gb|AGW05138.1| photosystem I
           assembly protein (chloroplast) [Asclepias syriaca]
          Length = 168

 Score =  100 bits (250), Expect = 2e-19
 Identities = 46/47 (97%), Positives = 46/47 (97%)
 Frame = +2

Query: 251 RGEQAIRQGDSEIAEAWFDQAAEYWKQAITLTPGNYIEAHNWLKITR 391
           RGEQAIRQGDSEIAEAWFDQAAEYWKQAI LTPGNYIEAHNWLKITR
Sbjct: 119 RGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLKITR 165