BLASTX nr result

ID: Rauwolfia21_contig00019894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00019894
         (516 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulg...   134   1e-33
ref|XP_002446122.1| hypothetical protein SORBIDRAFT_06g002025 [S...    82   9e-14
ref|XP_002439577.1| hypothetical protein SORBIDRAFT_09g014016 [S...    79   6e-13
emb|CBI23503.3| unnamed protein product [Vitis vinifera]               50   4e-11
ref|XP_003593389.1| hypothetical protein MTR_2g010910 [Medicago ...    52   4e-10
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...    69   6e-10

>ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435151|ref|YP_004222369.1| hypothetical
           protein BevumaM_p136 [Beta vulgaris subsp. maritima]
           gi|346683242|ref|YP_004842174.1| hypothetical protein
           BemaM_p130 [Beta macrocarpa] gi|9049306|dbj|BAA99316.1|
           orf107b [Beta vulgaris subsp. vulgaris]
           gi|317905601|emb|CBJ14008.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439884|emb|CBJ17584.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148038|emb|CBJ20702.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500160|emb|CBX24979.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977914|emb|CBL54138.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 107

 Score =  134 bits (338), Expect(2) = 1e-33
 Identities = 66/72 (91%), Positives = 66/72 (91%)
 Frame = +3

Query: 3   SSSRPIDHGTNRVGRPKHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSSTSLLQSS 182
           SS RPIDHGTNRVGRP HHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSST  LQSS
Sbjct: 3   SSCRPIDHGTNRVGRPNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSSTFPLQSS 62

Query: 183 IKLAFPRRYEMG 218
           IKLAF RR EMG
Sbjct: 63  IKLAFSRRSEMG 74



 Score = 34.3 bits (77), Expect(2) = 1e-33
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +2

Query: 245 IGLASSRTKEAFWRTHACRKADDYIS 322
           IGLASSR+K  + R  ACRKAD YIS
Sbjct: 83  IGLASSRSK-LYLRARACRKADHYIS 107


>ref|XP_002446122.1| hypothetical protein SORBIDRAFT_06g002025 [Sorghum bicolor]
           gi|241937305|gb|EES10450.1| hypothetical protein
           SORBIDRAFT_06g002025 [Sorghum bicolor]
          Length = 132

 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 37/43 (86%), Positives = 37/43 (86%)
 Frame = +3

Query: 3   SSSRPIDHGTNRVGRPKHHTTRIDANPPRYRTCDSHRIRLAQR 131
           SSSRPIDHGTNRV RP HHTT IDANPP YRTCDSHRIRL  R
Sbjct: 6   SSSRPIDHGTNRVSRPNHHTTCIDANPPPYRTCDSHRIRLTVR 48


>ref|XP_002439577.1| hypothetical protein SORBIDRAFT_09g014016 [Sorghum bicolor]
           gi|241944862|gb|EES18007.1| hypothetical protein
           SORBIDRAFT_09g014016 [Sorghum bicolor]
          Length = 100

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 38/51 (74%), Positives = 39/51 (76%)
 Frame = -2

Query: 155 KGSGWI*ESLCEPYXXXXXXXXXRGVCVYTCSVVLGPTHPICSMIYGSTGA 3
           K SGWI ESLCEPY         RGV VYTCSVV+GPTHPICSMIYGSTGA
Sbjct: 2   KSSGWIFESLCEPYAVRVARTVRRGVRVYTCSVVVGPTHPICSMIYGSTGA 52


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 50.1 bits (118), Expect(2) = 4e-11
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = -2

Query: 83  GVCVYTCSVVLGPTHPICSMIYGSTGA 3
           GV VYT SV +GPTHPICSMIYGSTGA
Sbjct: 30  GVRVYTYSVRVGPTHPICSMIYGSTGA 56



 Score = 43.1 bits (100), Expect(2) = 4e-11
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = -1

Query: 243 TYDRRRKDPPFHSAWGTQV 187
           TYDRRRKDPPFHS WGT V
Sbjct: 13  TYDRRRKDPPFHSTWGTGV 31


>ref|XP_003593389.1| hypothetical protein MTR_2g010910 [Medicago truncatula]
           gi|355482437|gb|AES63640.1| hypothetical protein
           MTR_2g010910 [Medicago truncatula]
          Length = 60

 Score = 51.6 bits (122), Expect(2) = 4e-10
 Identities = 24/27 (88%), Positives = 24/27 (88%)
 Frame = -2

Query: 83  GVCVYTCSVVLGPTHPICSMIYGSTGA 3
           GV VYT SVVLGPTHPICSMIY STGA
Sbjct: 21  GVRVYTFSVVLGPTHPICSMIYASTGA 47



 Score = 38.1 bits (87), Expect(2) = 4e-10
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = -1

Query: 144 MDLGVFVRAVCGESRTYGNEGGLRLY 67
           MDLGVFVR +CGESR  GN+ G+R+Y
Sbjct: 1   MDLGVFVREMCGESRRCGNK-GVRVY 25


>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 33/44 (75%), Positives = 34/44 (77%)
 Frame = -2

Query: 134 ESLCEPYXXXXXXXXXRGVCVYTCSVVLGPTHPICSMIYGSTGA 3
           ESLCEPY         RGV VYTCSVV+GPTHPICSMIYGSTGA
Sbjct: 91  ESLCEPYAVRVARTVTRGVRVYTCSVVVGPTHPICSMIYGSTGA 134


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