BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00019841
         (3437 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]   220   2e-85
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   207   4e-76
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...   209   1e-74
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   209   2e-74
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...   191   2e-73
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...   209   2e-72
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...   200   2e-72
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   200   8e-72
ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661...   264   4e-69
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   197   5e-69
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   196   6e-69
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   211   4e-68
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   209   5e-68
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]   199   7e-68
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]   193   7e-68
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   203   7e-68
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]   195   9e-67
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   211   3e-64
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...   197   2e-63
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]   192   1e-59

>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
          Length = 1109

 Score =  220 bits (560), Expect(4) = 2e-85
 Identities = 107/205 (52%), Positives = 136/205 (66%), Gaps = 2/205 (0%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLTIVDD SRA WIYLL +K+E   +   F  MV+ QF+ ++K +R+DNG +F CL   F
Sbjct: 402  FLTIVDDCSRAVWIYLLNRKNEVACVLKNFIVMVRQQFEKNVKIVRSDNGTKFMCLTKXF 461

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
              H I+HQT   G PQ N   ERKH HILN+  AL F +HLP+ F GECVL A YLIN T
Sbjct: 462  AKHGILHQTSCVGXPQXNGHVERKHRHILNVVRALRFQAHLPIEFWGECVLIARYLINXT 521

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAH--TLSKDKFAPQSRQCIFVGYLPHKK 3061
            PS+ L+GKTP E+L+G+ P Y H+  FGCLC+AH     KDKFA +SR+CIFVGY   KK
Sbjct: 522  PSVFLDGKTPYEILYGQAPSYKHIXTFGCLCYAHDQNRDKDKFASRSRKCIFVGYPFGKK 581

Query: 3062 GWRFFNLVTANISFLMTLCFMKTTF 3136
            GWR ++L +        + F++  F
Sbjct: 582  GWRLYDLESGEYFVSRBVIFVEAEF 606



 Score = 89.4 bits (220), Expect(4) = 2e-85
 Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
 Frame = +1

Query: 2152 FTDKYCVI*DHSSKTLIGASEQKNGVYQFRALLMFSSAFHIQTVSRSV*HSRLGHPFDKV 2331
            FT+K C I D  S+ LIG  EQ  G+Y  + +    +       S  + H R+GHP  +V
Sbjct: 276  FTNKICAIQDRISRMLIGVGEQCEGLYFLKGVAPIRAYKTTSIASYELWHRRMGHPSSRV 335

Query: 2332 LNLLSEIVPHGSHPS-ENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSIQCDLWGPYKEAS 2508
            ++L+ E+   G +   +N++C   F+A+QTR   F   + A   FD I CDLWG Y+  +
Sbjct: 336  VDLIXEVDSVGRNDGXKNKFCDICFRAQQTREMFFSSDNKAKECFDLIHCDLWGAYRVPA 395

Query: 2509 SCGAFYF 2529
            SCG  YF
Sbjct: 396  SCGGIYF 402



 Score = 41.6 bits (96), Expect(4) = 2e-85
 Identities = 20/39 (51%), Positives = 26/39 (66%)
 Frame = +3

Query: 2037 SVSLGSKLTLSNVLYVPNLTCNLILVSQLLSTTAFTMHF 2153
            +V+LG KL L +VL+VP L CNLI V QLL  +   + F
Sbjct: 238  TVTLGEKLKLRHVLFVPKLKCNLIFVLQLLDDSNLVVQF 276



 Score = 37.7 bits (86), Expect(4) = 2e-85
 Identities = 21/63 (33%), Positives = 32/63 (50%)
 Frame = +2

Query: 1832 WSTLINLLNTHQSSPSIDRXXXXXXXXXXXXXXXXXHHMTGC*AILHHMHQIAPCNVGLL 2011
            W+TL+ +LN+H+S  + +                  HHMTG    L+ +  I PC VGL 
Sbjct: 168  WATLLTMLNSHKSGAN-ZMLTGKQNILPWIIDTGAXHHMTGTYECLNDLRDIMPCLVGLP 226

Query: 2012 DGS 2020
            +G+
Sbjct: 227  NGA 229



 Score =  107 bits (267), Expect = 4e-20
 Identities = 45/95 (47%), Positives = 67/95 (70%)
 Frame = +3

Query: 1161 IANCRQTGSTVMTYYARLKKLWDELGAFERVPICQGKGCHCNITTELIKCQEEEKVHQLL 1340
            + NC+  G  ++ YY RLK LWDEL  ++ +P+C   GC CNIT +L K +E E+VHQ L
Sbjct: 33   JVNCKXXGQGIVXYYGRLKSLWDELNNYDLIPVCTCTGCKCNITIQLEKKREXERVHQFL 92

Query: 1341 MGLDQTIFRTVSSSILSIEPLPTISHAYSMLIREE 1445
            +GLD+  + TV S+ILS EPLP ++  Y+M++++E
Sbjct: 93   IGLDENGYGTVXSNILSXEPLPNLNXVYAMIVQQE 127


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  207 bits (526), Expect(4) = 4e-76
 Identities = 101/187 (54%), Positives = 126/187 (67%), Gaps = 2/187 (1%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLTIVDD+SRA W YLL +KSE   +   F    + QF  ++K +R+DNG EF CL   F
Sbjct: 606  FLTIVDDYSRAVWTYLLLEKSEVRQVLTNFLKYAEKQFGKTVKMVRSDNGTEFMCLSSYF 665

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
             ++ IIHQT   G PQQN R ERKH HILN+A AL F + LP+ F GE +LTA YLIN T
Sbjct: 666  RENGIIHQTSCVGTPQQNGRVERKHRHILNVARALLFQASLPIKFWGESILTAAYLINRT 725

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAH--TLSKDKFAPQSRQCIFVGYLPHKK 3061
            PS +L+G+TP E+LHG  P Y+ LR FG  C+ H  T  KDKF  +SR CIFVGY   KK
Sbjct: 726  PSSILSGRTPYEVLHGSKPVYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFGKK 785

Query: 3062 GWRFFNL 3082
            GW+ +++
Sbjct: 786  GWKVYDI 792



 Score = 82.4 bits (202), Expect(4) = 4e-76
 Identities = 52/138 (37%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
 Frame = +1

Query: 2128 LLQLSLCI--FTDKYCVI*DHSSKTLIGASEQKNGVYQFRALLMFSSAFHIQTVS--RSV 2295
            LL+ + C+  FTD  C + D SSKTLIG+ E++ GVY    +    +  H   V   +++
Sbjct: 472  LLKQTQCLATFTDTLCFLQDRSSKTLIGSGEERGGVYYLTDVT--PAKIHTANVDSDQAL 529

Query: 2296 *HSRLGHPFDKVLNLLSEIVPHGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSIQ 2475
             H RLGHP   VL+ L  +    S    +  C   F+AKQTR       +     F  I 
Sbjct: 530  WHQRLGHPSFSVLSSLP-LFSKTSSTVTSHSCDVCFRAKQTREVFPESINKTEECFSLIH 588

Query: 2476 CDLWGPYKEASSCGAFYF 2529
            CD+WGPY+  +SCGA YF
Sbjct: 589  CDVWGPYRVPASCGAVYF 606



 Score = 37.7 bits (86), Expect(4) = 4e-76
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = +3

Query: 2004 DCSMAATTLVVSVSLGSKLTLSNVLYVPNLTCNLILVSQLLSTT 2135
            D S A    V  ++L + ++L+NVL+VP+L C LI VS+LL  T
Sbjct: 433  DGSKAFALSVGVLTLSNTVSLTNVLFVPSLNCTLISVSKLLKQT 476



 Score = 30.4 bits (67), Expect(4) = 4e-76
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 1940 HHMTGC*AILHHMHQIAPCNVGLLDGS 2020
            HHMTG  + L ++  + PC VG  DGS
Sbjct: 409  HHMTGTLSSLTNVVPVPPCPVGFADGS 435



 Score =  193 bits (491), Expect = 4e-46
 Identities = 92/235 (39%), Positives = 147/235 (62%)
 Frame = +3

Query: 819  YTLMSNDNPHLLITHVKLKQKTYEE*AMAMQTALRAKKKLGSIDGTLL*PDADSLEIEEW 998
            YTL S+DNP  +I+ V+L    Y + A  M  AL+AK+K G I+GT+  P  +    E W
Sbjct: 32   YTLASSDNPGAVISSVELNGDNYNQWATEMLNALQAKRKTGFINGTIPRPPPNDPNYENW 91

Query: 999  WTMNFMIVSWIFNTIEPSLRSTITYVDSTRVLWDDLKQRFLVSNGPRLQENKAAIANCRQ 1178
              +N MIV WI  +IEP +++T+T++    +LW DLKQRF V N  R+ + +A +++CRQ
Sbjct: 92   TAVNSMIVGWIRTSIEPKVKATVTFISDAHLLWKDLKQRFSVGNKVRIHQIRAQLSSCRQ 151

Query: 1179 TGSTVMTYYARLKKLWDELGAFERVPICQGKGCHCNITTELIKCQEEEKVHQLLMGLDQT 1358
             G  V+ YY RL  LW+E   ++ V +C    C C  T+E  K +EEEK+HQ ++GLD++
Sbjct: 152  DGQAVIEYYGRLSNLWEEYNIYKPVTVCTCGLCRCGATSEPTKEREEEKIHQFVLGLDES 211

Query: 1359 IFRTVSSSILSIEPLPTISHAYSMLIREERHHAIVQGKDE*VEAIGLAMAQSNLE 1523
             F  + +++++++PLP++   YS +IREE+  A V  +++  EA+G    +  L+
Sbjct: 212  RFGGLCATLINMDPLPSLGEIYSRVIREEQRLASVHVREQKEEAVGFLARREQLD 266


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score =  209 bits (531), Expect(3) = 1e-74
 Identities = 104/205 (50%), Positives = 132/205 (64%), Gaps = 2/205 (0%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLT+VDD+SRA W+YLL  K E       F ++V+ Q+ T+IK IR+DNG EF CL   F
Sbjct: 583  FLTLVDDYSRAVWLYLLPSKQEAPKHLKNFIALVERQYTTNIKMIRSDNGSEFICLSDFF 642

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
                IIH+T   G PQQN R ERKH HILN+A AL F S LP+ F   C LTA YLIN T
Sbjct: 643  AQKGIIHETSCVGTPQQNGRVERKHRHILNVARALRFQSGLPIEFWSYCALTAAYLINRT 702

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAHTLSK--DKFAPQSRQCIFVGYLPHKK 3061
            P+ +L GKTP EL++ +PP   H+R FGC+C+ H L    DKFA +S + IF+GY   KK
Sbjct: 703  PTPLLKGKTPFELIYNRPPPLQHIRIFGCICYVHNLKHGGDKFASRSNKSIFLGYPFAKK 762

Query: 3062 GWRFFNLVTANISFLMTLCFMKTTF 3136
            GWR +N+ T  +S    + F +T F
Sbjct: 763  GWRVYNIETGVVSVSRDVVFRETEF 787



 Score = 86.3 bits (212), Expect(3) = 1e-74
 Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
 Frame = +1

Query: 2146 CIF--TDKYCVI*DHSSKTLIGASEQKNGVYQFRALLMFSSAFHIQTVSRSV*HSRLGHP 2319
            CIF  TDK C++ D ++  LIGA  + NG+Y FR +   ++       S  + H RLGHP
Sbjct: 455  CIFQITDKVCIVQDRTTLMLIGAGRELNGLYFFRGVETAAAVTSKALPSSQLWHQRLGHP 514

Query: 2320 FDKVLNLL--SEIVPHGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSIQCDLWGP 2493
              K L+LL  S++    S   +++ C    QAKQTR    +  +     F+ + CDLWGP
Sbjct: 515  SSKALHLLPFSDVT---SSTFDSKTCEICIQAKQTRDPFPLSSNKTSFAFELVHCDLWGP 571

Query: 2494 YKEASSCGAFYF 2529
            Y+  S CG+ YF
Sbjct: 572  YRTTSICGSRYF 583



 Score = 36.2 bits (82), Expect(3) = 1e-74
 Identities = 19/32 (59%), Positives = 22/32 (68%)
 Frame = +3

Query: 2037 SVSLGSKLTLSNVLYVPNLTCNLILVSQLLST 2132
            SV LGS L L +VL+V  L C+LI VSQL  T
Sbjct: 421  SVQLGSSLDLQDVLFVDGLHCHLISVSQLTRT 452



 Score =  153 bits (386), Expect = 6e-34
 Identities = 78/229 (34%), Positives = 135/229 (58%)
 Frame = +3

Query: 819  YTLMSNDNPHLLITHVKLKQKTYEE*AMAMQTALRAKKKLGSIDGTLL*PDADSLEIEEW 998
            Y L S DNP  LI+   L+   Y+E A  ++ AL+A+KK G  DG++  P     + E+W
Sbjct: 25   YDLTSGDNPGTLISKPLLRGPNYDEWATNLRLALKARKKFGFADGSIPQPVETDPDFEDW 84

Query: 999  WTMNFMIVSWIFNTIEPSLRSTITYVDSTRVLWDDLKQRFLVSNGPRLQENKAAIANCRQ 1178
               N ++VSW+  TI+ ++ ++++++D +  LW  +++RF V NG R+Q  K  +A CRQ
Sbjct: 85   TANNALVVSWMKLTIDETVSTSMSHLDDSHELWTHIQKRFGVKNGQRVQRLKTELATCRQ 144

Query: 1179 TGSTVMTYYARLKKLWDELGAFERVPICQGKGCHCNITTELIKCQEEEKVHQLLMGLDQT 1358
             G  + TYY RL +LW  L  +++               ++ K +EE+K+HQ LMGLD++
Sbjct: 145  KGVAIETYYGRLSQLWRSLADYQQ----------AKTMDDVRKEREEDKLHQFLMGLDES 194

Query: 1359 IFRTVSSSILSIEPLPTISHAYSMLIREERHHAIVQGKDE*VEAIGLAM 1505
            ++  V S++LS  PLP++  AY+ L ++E   ++ +  +E V+ +  A+
Sbjct: 195  VYGAVKSALLSRVPLPSLEEAYNALTQDEESKSLSRLHNERVDGVSFAV 243


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  209 bits (533), Expect(4) = 2e-74
 Identities = 103/192 (53%), Positives = 128/192 (66%), Gaps = 2/192 (1%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLT+VDD+SR+ W YL++ K+E   +   FC+M + QF   +K  RTDNG EF CL   F
Sbjct: 579  FLTLVDDYSRSVWTYLMSSKTEVSQLIKNFCAMSERQFGKQVKAFRTDNGTEFMCLTPYF 638

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
              H I+HQT     PQQN R ERKH HILN+A A  F  +LPV F GE +LTA +LIN T
Sbjct: 639  QTHGILHQTSCVDTPQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILTATHLINRT 698

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAH--TLSKDKFAPQSRQCIFVGYLPHKK 3061
            PS VL GKTP ELL G+ P Y  LR+FGCLC+AH    +KDKF  +SR+C+F+GY   KK
Sbjct: 699  PSAVLKGKTPYELLFGERPSYDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKK 758

Query: 3062 GWRFFNLVTANI 3097
             WR ++L T  I
Sbjct: 759  AWRVYDLETGKI 770



 Score = 79.0 bits (193), Expect(4) = 2e-74
 Identities = 48/132 (36%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
 Frame = +1

Query: 2140 SLCIFTDKYCVI*DHSSKTLIGASEQKNGVYQFRALL--MFSSAFHIQTVSRSV*HSRLG 2313
            S+ IFTD +C + D   +TLIGA E++ GVY F  +L      A     +S  + H RLG
Sbjct: 448  SIAIFTDTFCFLQDRFLRTLIGAGEEREGVYYFTGVLAPRVHKASSDFAISGDLWHRRLG 507

Query: 2314 HPFDKVLNLLSEIVPHGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSIQCDLWGP 2493
            HP   VL  L E         +   C + F++KQTR    +  +     F  I  D+WGP
Sbjct: 508  HPSTSVLLSLPECNRSSQGFDKIDSCDTCFRSKQTREVFPISNNKTMECFSLIHGDVWGP 567

Query: 2494 YKEASSCGAFYF 2529
            Y+  S+ GA YF
Sbjct: 568  YRTPSTTGAVYF 579



 Score = 33.5 bits (75), Expect(4) = 2e-74
 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
 Frame = +1

Query: 3097 FISHDVVFHEDHFLYAHLS------PPPTDFGPPLGSANTFPIPVYEYDIRSPATFASAP 3258
            F S DV FHED + YA  +      PPPT   PP+ + + F +P+      +    +S+ 
Sbjct: 771  FASRDVRFHEDIYPYATATQSNVPLPPPT---PPMVNDDWF-LPISTQVDSTNVDSSSSS 826

Query: 3259 TLAARGS-DGIDRGLDSSDNDSDGPTVLDRIELATASHP 3372
            + A  GS D   R +D S + S  P   +   +  +S P
Sbjct: 827  SPAQSGSIDQPPRSIDQSPSTSTNPVPEEIGSIVPSSSP 865



 Score = 29.3 bits (64), Expect(4) = 2e-74
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 2004 DCSMAATTLVVSVSLGSKLTLSNVLYVPNLTCNLILVSQLLSTTA 2138
            D   +  T   ++ L     L +VL+VP+  C LI VS+LL  T+
Sbjct: 403  DGKASQATKCGTLLLHDSYKLHDVLFVPDFDCTLISVSKLLKQTS 447



 Score =  171 bits (434), Expect = 2e-39
 Identities = 100/251 (39%), Positives = 146/251 (58%), Gaps = 1/251 (0%)
 Frame = +3

Query: 819  YTLMSNDNPHLLITHVKLKQKTYEE*AMAMQTALRAKKKLGSIDGTLL*PDADSLEIEEW 998
            Y + ++DNP  LI+ V LK+  Y E +  +Q  LRAK+KLG IDG++  P AD  E+  W
Sbjct: 22   YLINASDNPGALISSVVLKENNYAEWSEELQNFLRAKQKLGFIDGSIPKPAADP-ELSLW 80

Query: 999  WTMNFMIVSWIFNTIEPSLRSTITYVDSTRVLWDDLKQRFLVSNGPRLQENKAAIANCRQ 1178
              +N MIV WI  +I+P++RST+ +V     LW++L++RF V NG R    K  IA C Q
Sbjct: 81   IAINSMIVGWIRTSIDPTIRSTVGFVSEASQLWENLRRRFSVGNGVRKTLLKDEIAACTQ 140

Query: 1179 TGSTVMTYYARLKKLWDELGAFERVPICQGKGCHCNITTELIKCQEEEKVHQLLMGLDQT 1358
             G  V+ YY RL KLW+EL  ++      G+ C C   +++ K +E+++VH+ L+GLD  
Sbjct: 141  DGQPVLAYYGRLIKLWEELQNYK-----SGRECKCEAASDIEKEREDDRVHKFLLGLDSR 195

Query: 1359 IFRTVSSSILSIEPLPTISHAYSMLIREERHHAIVQGKD-E*VEAIGLAMAQSNLEWMPL 1535
             F ++ SSI  IEPLP +   YS ++REE++    + KD    EAIG ++  S       
Sbjct: 196  -FSSIRSSITDIEPLPDLYQVYSRVVREEQNLNASRTKDVVKTEAIGFSVQSSTTPRFRD 254

Query: 1536 TKLLDSTMCAR 1568
               L  T C R
Sbjct: 255  KSTLFCTHCNR 265


>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score =  191 bits (485), Expect(4) = 2e-73
 Identities = 95/187 (50%), Positives = 124/187 (66%), Gaps = 2/187 (1%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLTIVDDHSRA WI+L+  KSE   +  +F +M   QF   +K +R++NG EF  LK  F
Sbjct: 593  FLTIVDDHSRAVWIHLMLAKSEVASLLQQFIAMASRQFNKQVKTVRSNNGTEFMSLKSYF 652

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
             +  I+HQ       QQN R ERKH HILN+A +L F + LP++F  E VLTA YLIN T
Sbjct: 653  AERGIVHQISCVYTHQQNGRVERKHRHILNVARSLLFQAELPISFWEESVLTAAYLINRT 712

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFA--HTLSKDKFAPQSRQCIFVGYLPHKK 3061
            P+ +L+GKTP ++L+ +PP Y  LR FG LCFA  HT   DKF  + R+CIFVGY   +K
Sbjct: 713  PTPILDGKTPYKILYSQPPSYASLRVFGSLCFARKHTGRLDKFQERGRKCIFVGYPHGQK 772

Query: 3062 GWRFFNL 3082
            GWR +++
Sbjct: 773  GWRIYDI 779



 Score = 93.6 bits (231), Expect(4) = 2e-73
 Identities = 59/131 (45%), Positives = 77/131 (58%), Gaps = 4/131 (3%)
 Frame = +1

Query: 2149 IFTDKYCVI*DHSSKTLIGASEQKNGVYQF-RALLMFSSAFHIQ-TVSRSV*HSRLGHPF 2322
            IFTDK CVI D +SK LIG   + NGVY   RA ++ +SA  ++   ++++ H RLGHP 
Sbjct: 463  IFTDKVCVIQDRTSKMLIGVGTESNGVYHLQRAEVVATSANVVKWKTNKALWHMRLGHPS 522

Query: 2323 DKVLN-LLSEIVPHGSHPSE-NQYCVSSFQAKQTRYSHFVGFS*AHTIFDSIQCDLWGPY 2496
             KVL+ +L  +    S  S+    C    +AKQTR S    F+ A   F  I  D+WGPY
Sbjct: 523  SKVLSSVLPSLEDFDSCSSDLKTICDVCVRAKQTRASFSESFNKAEECFSFIHYDVWGPY 582

Query: 2497 KEASSCGAFYF 2529
            K ASSCGA YF
Sbjct: 583  KHASSCGAHYF 593



 Score = 33.5 bits (75), Expect(4) = 2e-73
 Identities = 14/27 (51%), Positives = 23/27 (85%)
 Frame = +3

Query: 2046 LGSKLTLSNVLYVPNLTCNLILVSQLL 2126
            LG+ + L++VL+VP+L+C LI V++LL
Sbjct: 429  LGANMKLTHVLFVPDLSCTLISVARLL 455



 Score = 30.4 bits (67), Expect(4) = 2e-73
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = +1

Query: 3094 YFISHDVVFHEDHFLYAHLSPPPTDFGPPLGSANTFPIPVYEYD 3225
            +F+S DVVF ED F +A      T   P    A   P P+  YD
Sbjct: 784  FFVSRDVVFQEDIFPFADKKNKDTFSSP----AAVIPSPILPYD 823



 Score =  161 bits (408), Expect(2) = 4e-37
 Identities = 84/232 (36%), Positives = 134/232 (57%), Gaps = 3/232 (1%)
 Frame = +3

Query: 819  YTLMSNDNPHLLITHVKLKQKTYEE*AMAMQTALRAKKKLGSIDGTLL*PDADSLEIEEW 998
            Y L  +D+PH ++T + L  + YE  A   +  L+AK+KLG IDGTL  P +DS +   W
Sbjct: 25   YYLHPSDHPHHVLTPMLLNGENYERWAKLTRNNLQAKQKLGFIDGTLTKPSSDSPDYPRW 84

Query: 999  WTMNFMIVSWIFNTIEPSLRSTITYVDSTRVLWDDLKQRFLVSNGPRLQENKAAIANCRQ 1178
               N M+V W++ +++P ++ +I+ VD+ RV+W+ L+ R+ V N  R+ + K  I  CRQ
Sbjct: 85   LQTNSMLVGWLYASLDPQVQKSISVVDNARVMWESLRTRYSVGNASRVHQLKYDIVACRQ 144

Query: 1179 TGSTVMTYYARLKKLWDELGAFERVPICQGKGCHCNITTELIKCQEEEKVHQLLMGLDQT 1358
             G T   Y+ +LK +WD+L  +E +  C      C       + ++ E++HQ LMGLD  
Sbjct: 145  DGQTAANYFGKLKVMWDDLDDYEPLLTCCCNRPSCTHRVRQSQRRDHERIHQFLMGLDAA 204

Query: 1359 IFRTVSSSI---LSIEPLPTISHAYSMLIREERHHAIVQGKDE*VEAIGLAM 1505
             F T  ++I   LS +   ++   YS +I EERH  I + K+E V+A+G A+
Sbjct: 205  KFGTSRTNILGRLSRDDNISLDSIYSEIIAEERHLTITRSKEERVDAVGFAV 256



 Score = 23.5 bits (49), Expect(2) = 4e-37
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
 Frame = +2

Query: 1511 IKSGMDATDKAARFYNV-----CQKSGHDTNTAFKL 1603
            +++G++A     R  N+     C +S H  +T FKL
Sbjct: 256  VQTGVNAIASVTRVNNMGPCTHCGRSNHSADTCFKL 291


>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score =  209 bits (533), Expect(2) = 2e-72
 Identities = 105/205 (51%), Positives = 130/205 (63%), Gaps = 2/205 (0%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLT+VD+++RA W+YLL  K         F S+V+ QF T IK IR+DNG EF CL   F
Sbjct: 547  FLTLVDNYTRAVWLYLLPSKQTAPMHLKNFISLVERQFSTKIKTIRSDNGTEFVCLSSFF 606

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
            VDH IIH+T   G PQQN R ERKH HILN+A AL F + LP+ F   C LTA YLIN T
Sbjct: 607  VDHGIIHETSCVGTPQQNGRVERKHRHILNVARALRFQARLPIEFWSYCALTAAYLINRT 666

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAHTLSK--DKFAPQSRQCIFVGYLPHKK 3061
            P+ +L GKTP ELL+ +PP   H+R FGC+C+ H      DKF  +S + IF+GY   KK
Sbjct: 667  PTPLLQGKTPFELLYNRPPPVNHIRVFGCICYVHNQKHGGDKFESRSNKSIFLGYPFAKK 726

Query: 3062 GWRFFNLVTANISFLMTLCFMKTTF 3136
            GWR +N  T  IS    + F +T F
Sbjct: 727  GWRVYNFETGVISVSRDVVFRETEF 751



 Score = 93.6 bits (231), Expect(2) = 2e-72
 Identities = 55/136 (40%), Positives = 77/136 (56%), Gaps = 2/136 (1%)
 Frame = +1

Query: 2128 LLQLSLCIF--TDKYCVI*DHSSKTLIGASEQKNGVYQFRALLMFSSAFHIQTVSRSV*H 2301
            L +   C+F  TDK C+I D  + TLIGA +Q+NG+Y FR     +S   + + S  + H
Sbjct: 414  LTRAKSCVFQITDKVCIIQDRITLTLIGAGKQQNGLYFFRGTETVASMTRMDS-SSQLWH 472

Query: 2302 SRLGHPFDKVLNLLSEIVPHGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSIQCD 2481
             RLGHP  KVL LLS     G H  +++ C    +AKQTR    +  +   + F+ + CD
Sbjct: 473  CRLGHPSSKVLKLLSFSDSTG-HAFDSKTCEICIKAKQTRDPFPLSNNKTSSPFEMVHCD 531

Query: 2482 LWGPYKEASSCGAFYF 2529
            LWGPY+  S CG+ YF
Sbjct: 532  LWGPYRTTSICGSNYF 547



 Score =  156 bits (395), Expect = 5e-35
 Identities = 79/220 (35%), Positives = 133/220 (60%)
 Frame = +3

Query: 819  YTLMSNDNPHLLITHVKLKQKTYEE*AMAMQTALRAKKKLGSIDGTLL*PDADSLEIEEW 998
            Y L S DNP  LI+   L+   Y+E A  ++ AL+A+KK G  DGT+  PD  + + ++W
Sbjct: 24   YDLTSGDNPGTLISKPLLRGPNYDEWATNLRLALKARKKFGFADGTIPQPDETNPDFDDW 83

Query: 999  WTMNFMIVSWIFNTIEPSLRSTITYVDSTRVLWDDLKQRFLVSNGPRLQENKAAIANCRQ 1178
               N ++VSW+  TI  SL ++++++D +  +W  +++RF V NG R+Q  K  +A CRQ
Sbjct: 84   IANNALVVSWMKLTIHESLATSMSHLDDSHDMWTHIQKRFGVKNGQRIQRLKTELATCRQ 143

Query: 1179 TGSTVMTYYARLKKLWDELGAFERVPICQGKGCHCNITTELIKCQEEEKVHQLLMGLDQT 1358
             G+ + TYY +L +LW  L  +++    +          E+ K +EE+K+HQ LMGLD++
Sbjct: 144  KGTPIETYYGKLSQLWRSLADYQQAKTME----------EVRKEREEDKLHQFLMGLDES 193

Query: 1359 IFRTVSSSILSIEPLPTISHAYSMLIREERHHAIVQGKDE 1478
            ++  V S++LS  PLP++  AY+ L ++E   ++ +  DE
Sbjct: 194  MYGAVKSALLSRVPLPSLEEAYNTLTQDEESKSLSRLHDE 233


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  200 bits (509), Expect(4) = 2e-72
 Identities = 104/205 (50%), Positives = 127/205 (61%), Gaps = 2/205 (0%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLTIVDD SR+ W YLL  KSE   +   F +  + QF  S+K IR+DNG EF CL   F
Sbjct: 589  FLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEFMCLSSYF 648

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
             +  I+HQT   G PQQN R ERKH HILN++ AL F + LP+ F GE V+TA YLIN T
Sbjct: 649  KEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINRT 708

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAH--TLSKDKFAPQSRQCIFVGYLPHKK 3061
            PS + NG +P ELLHG  P Y  LR FG  C+AH  T  KDKF  +SR CIFVGY   +K
Sbjct: 709  PSSIHNGLSPYELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQK 768

Query: 3062 GWRFFNLVTANISFLMTLCFMKTTF 3136
            GW+ ++L T        + F +  F
Sbjct: 769  GWKVYDLSTNEFIVSRDVVFRENVF 793



 Score = 82.0 bits (201), Expect(4) = 2e-72
 Identities = 49/129 (37%), Positives = 67/129 (51%)
 Frame = +1

Query: 2143 LCIFTDKYCVI*DHSSKTLIGASEQKNGVYQFRALLMFSSAFHIQTVSRSV*HSRLGHPF 2322
            L +FTD  CV+ D  S+TLIG  E+++GVY        +      T   ++ H RLGHP 
Sbjct: 462  LALFTDTICVLQDRFSRTLIGTGEERDGVYYLTDAATTTVHKVDITTDHALWHQRLGHPS 521

Query: 2323 DKVLNLLSEIVPHGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSIQCDLWGPYKE 2502
              VL+ L  +    S    ++ C   F+AKQTR       + +   F  I CD+WGPY+ 
Sbjct: 522  FSVLSSLP-LFSGSSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRV 580

Query: 2503 ASSCGAFYF 2529
             SSCGA YF
Sbjct: 581  PSSCGAVYF 589



 Score = 34.3 bits (77), Expect(4) = 2e-72
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +3

Query: 2046 LGSKLTLSNVLYVPNLTCNLILVSQLL 2126
            L   ++LSNVLYVP L C+LI VS+L+
Sbjct: 430  LSETVSLSNVLYVPALNCSLISVSKLV 456



 Score = 28.1 bits (61), Expect(4) = 2e-72
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 1940 HHMTGC*AILHHMHQIAPCNVGLLDG 2017
            HHMTG  ++L ++  I  C+VG  DG
Sbjct: 392  HHMTGQLSLLTNIVTIPSCSVGFADG 417



 Score =  187 bits (476), Expect = 2e-44
 Identities = 93/234 (39%), Positives = 144/234 (61%)
 Frame = +3

Query: 819  YTLMSNDNPHLLITHVKLKQKTYEE*AMAMQTALRAKKKLGSIDGTLL*PDADSLEIEEW 998
            YTL S+DNP  +I+ V L    Y E +  M  AL+AK+K G I+G++  P  D+ + E W
Sbjct: 27   YTLASSDNPGAMISSVMLTGDNYNEWSTKMLNALQAKRKTGFINGSISKPPLDNPDYENW 86

Query: 999  WTMNFMIVSWIFNTIEPSLRSTITYVDSTRVLWDDLKQRFLVSNGPRLQENKAAIANCRQ 1178
              +N MIV WI  +IEP ++ST+T++     LW +LKQRF V N   + + K  +A CRQ
Sbjct: 87   QAVNSMIVGWIRASIEPKVKSTVTFICDAHQLWSELKQRFSVGNKVHVHQIKTQLAACRQ 146

Query: 1179 TGSTVMTYYARLKKLWDELGAFERVPICQGKGCHCNITTELIKCQEEEKVHQLLMGLDQT 1358
             G  V+ YY RL KLW+E   ++ + +C+   C C  T E  K +EEEK+HQ ++GLD +
Sbjct: 147  DGQPVIDYYGRLCKLWEEFQIYKPITVCKCGLCTCGATLEPSKEREEEKIHQFVLGLDDS 206

Query: 1359 IFRTVSSSILSIEPLPTISHAYSMLIREERHHAIVQGKDE*VEAIGLAMAQSNL 1520
             F  +S+++++++P P++   YS ++REE+  A VQ +++   AIG    QS +
Sbjct: 207  RFGGLSATLIAMDPFPSLGEIYSRVVREEQRLASVQIREQQQSAIGFLTRQSEV 260


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  200 bits (509), Expect(4) = 8e-72
 Identities = 104/205 (50%), Positives = 127/205 (61%), Gaps = 2/205 (0%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLTIVDD SR+ W YLL  KSE   +   F +  + QF  S+K IR+DNG EF CL   F
Sbjct: 589  FLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEFMCLSSYF 648

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
             +  I+HQT   G PQQN R ERKH HILN++ AL F + LP+ F GE V+TA YLIN T
Sbjct: 649  KEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINRT 708

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAH--TLSKDKFAPQSRQCIFVGYLPHKK 3061
            PS + NG +P ELLHG  P Y  LR FG  C+AH  T  KDKF  +SR CIFVGY   +K
Sbjct: 709  PSSIHNGLSPYELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQK 768

Query: 3062 GWRFFNLVTANISFLMTLCFMKTTF 3136
            GW+ ++L T        + F +  F
Sbjct: 769  GWKVYDLSTNEFIVSRDVVFRENVF 793



 Score = 82.4 bits (202), Expect(4) = 8e-72
 Identities = 49/129 (37%), Positives = 67/129 (51%)
 Frame = +1

Query: 2143 LCIFTDKYCVI*DHSSKTLIGASEQKNGVYQFRALLMFSSAFHIQTVSRSV*HSRLGHPF 2322
            L +FTD  CV+ D  S+TLIG  E+++GVY        +      T   ++ H RLGHP 
Sbjct: 462  LALFTDTICVLQDRFSRTLIGTGEERDGVYYLTDAATTTVHKVDVTTDHALWHQRLGHPS 521

Query: 2323 DKVLNLLSEIVPHGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSIQCDLWGPYKE 2502
              VL+ L  +    S    ++ C   F+AKQTR       + +   F  I CD+WGPY+ 
Sbjct: 522  FSVLSSLP-LFSGSSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRV 580

Query: 2503 ASSCGAFYF 2529
             SSCGA YF
Sbjct: 581  PSSCGAVYF 589



 Score = 34.3 bits (77), Expect(4) = 8e-72
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +3

Query: 2046 LGSKLTLSNVLYVPNLTCNLILVSQLL 2126
            L   ++LSNVLYVP L C+LI VS+L+
Sbjct: 430  LSETVSLSNVLYVPALNCSLISVSKLV 456



 Score = 25.8 bits (55), Expect(4) = 8e-72
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 1940 HHMTGC*AILHHMHQIAPCNVGLLD 2014
            HHMTG  ++L ++  I  C+VG  D
Sbjct: 392  HHMTGQLSLLTNIVTIPSCSVGFAD 416



 Score =  192 bits (488), Expect = 9e-46
 Identities = 95/234 (40%), Positives = 146/234 (62%)
 Frame = +3

Query: 819  YTLMSNDNPHLLITHVKLKQKTYEE*AMAMQTALRAKKKLGSIDGTLL*PDADSLEIEEW 998
            YTL S+DNP  +I+ V L    Y E +  M  AL+AK+K G I+G++  P  D+ + E W
Sbjct: 27   YTLASSDNPGAMISSVMLTGDNYNEWSTEMLNALQAKRKTGFINGSISKPPLDNPDYENW 86

Query: 999  WTMNFMIVSWIFNTIEPSLRSTITYVDSTRVLWDDLKQRFLVSNGPRLQENKAAIANCRQ 1178
              +N MIV WI  +IEP ++ST+T++     LW +LKQRF V N  R+ + KA +A CRQ
Sbjct: 87   QAVNSMIVGWIRASIEPKVKSTVTFISDAHQLWSELKQRFSVGNKVRVHQIKAQLAACRQ 146

Query: 1179 TGSTVMTYYARLKKLWDELGAFERVPICQGKGCHCNITTELIKCQEEEKVHQLLMGLDQT 1358
             G  V+ YY RL KLW+E   ++ + +C+   C C  T E  K +EEEK+HQ ++GLD +
Sbjct: 147  DGQPVIDYYGRLCKLWEEFQIYKPITVCKCGLCTCGATLEPSKEREEEKIHQFVLGLDDS 206

Query: 1359 IFRTVSSSILSIEPLPTISHAYSMLIREERHHAIVQGKDE*VEAIGLAMAQSNL 1520
             F  +S+++++++P P++   YS ++REE+  A VQ +++   AIG    QS +
Sbjct: 207  RFGGLSATLIAMDPFPSLGEIYSRVVREEQRLASVQIREQQQSAIGFLTRQSEV 260


>ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661920 [Glycine max]
          Length = 516

 Score =  264 bits (674), Expect(3) = 4e-69
 Identities = 122/234 (52%), Positives = 174/234 (74%)
 Frame = +3

Query: 804  KDFGIYTLMSNDNPHLLITHVKLKQKTYEE*AMAMQTALRAKKKLGSIDGTLL*PDADSL 983
            K    Y L S+DNP  +IT V+LK + Y+E A A++ +LRA++K   +DG++  PD  + 
Sbjct: 26   KQISPYDLYSSDNPGNIITQVQLKGENYDEWARAVRGSLRARRKFRFVDGSIKKPDDAAP 85

Query: 984  EIEEWWTMNFMIVSWIFNTIEPSLRSTITYVDSTRVLWDDLKQRFLVSNGPRLQENKAAI 1163
            EI++WWT+N MIVSWIFNTIEP LRSTITY ++ + LWDD+KQRF +SNGPR+Q+ K+ +
Sbjct: 86   EIDDWWTVNSMIVSWIFNTIEPKLRSTITYRENAQELWDDIKQRFSISNGPRIQQLKSEL 145

Query: 1164 ANCRQTGSTVMTYYARLKKLWDELGAFERVPICQGKGCHCNITTELIKCQEEEKVHQLLM 1343
            ANC+Q G +++TY+ RLKKLWDEL  F+++P+C   GC C I+  L K +EEEK+HQ LM
Sbjct: 146  ANCKQNGDSIVTYFGRLKKLWDELNDFDQIPMCTCNGCKCGISAALNKKREEEKLHQFLM 205

Query: 1344 GLDQTIFRTVSSSILSIEPLPTISHAYSMLIREERHHAIVQGKDE*VEAIGLAM 1505
            GLD T FRTV S++LS++PLP ++ AY M+++EER   + +GK+E  + I  A+
Sbjct: 206  GLDDTQFRTVRSNVLSLDPLPNLNRAYQMVVQEERVGVMTRGKEERGDPIAFAV 259



 Score = 27.7 bits (60), Expect(3) = 4e-69
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 1594 FQVVGYLDW*SDRPKT 1641
            FQ+VGY DW  DRP++
Sbjct: 293  FQLVGYPDWWGDRPRS 308



 Score = 21.6 bits (44), Expect(3) = 4e-69
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 1562 CQKSGHDTNTAFKL 1603
            C++ GHD ++ F+L
Sbjct: 282  CKRDGHDIDSCFQL 295



 Score = 47.4 bits (111), Expect(3) = 2e-09
 Identities = 21/38 (55%), Positives = 28/38 (73%)
 Frame = +3

Query: 2040 VSLGSKLTLSNVLYVPNLTCNLILVSQLLSTTAFTMHF 2153
            V++G KL L +VL+VPNL CNLI +SQLL    + +HF
Sbjct: 432  VTVGDKLMLKHVLFVPNLNCNLISISQLLHDADYIVHF 469



 Score = 32.7 bits (73), Expect(3) = 2e-09
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +1

Query: 2152 FTDKYCVI*DHSSKTLIGASEQKNGVY 2232
            FT   CVI D +S+ +IGA EQ  G+Y
Sbjct: 469  FTKTMCVIQDRTSRMMIGAGEQSEGLY 495



 Score = 31.2 bits (69), Expect(3) = 2e-09
 Identities = 16/63 (25%), Positives = 27/63 (42%)
 Frame = +2

Query: 1832 WSTLINLLNTHQSSPSIDRXXXXXXXXXXXXXXXXXHHMTGC*AILHHMHQIAPCNVGLL 2011
            W+ L+N +NT +   S                    HHMT   A ++ +  I PC +G+ 
Sbjct: 364  WNALLNAINTQKGGTST----RLTGENSWIIDTGASHHMTSTLACMNDVRDIEPCPIGMP 419

Query: 2012 DGS 2020
            +G+
Sbjct: 420  NGT 422


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  197 bits (500), Expect(3) = 5e-69
 Identities = 101/205 (49%), Positives = 128/205 (62%), Gaps = 2/205 (0%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLTIVDD SRA WIYLL  K+E   +   F +MV  QF  ++K +++DNG EF CL   F
Sbjct: 344  FLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYF 403

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
                I+ QT   G PQQN R ERKH HILN+  AL F ++LP+ F GE VL A +LIN T
Sbjct: 404  SATGILFQTSCVGTPQQNGRVERKHKHILNVGRALRFQANLPIYFWGESVLAAAHLINRT 463

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAHTLSK--DKFAPQSRQCIFVGYLPHKK 3061
            PS +L+ KTP E+L G PP Y  +  FGCL FAH      DKFA +SR+C+F+GY   KK
Sbjct: 464  PSPLLHNKTPFEILFGTPPSYAAIHTFGCLSFAHDXKSKGDKFASRSRKCVFLGYPFGKK 523

Query: 3062 GWRFFNLVTANISFLMTLCFMKTTF 3136
            GW+ F+L T  +     + F +  F
Sbjct: 524  GWKLFDLDTKELFVSRDVKFFEDVF 548



 Score = 74.7 bits (182), Expect(3) = 5e-69
 Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
 Frame = +1

Query: 2122 YCLLQLSLCIFTDKYCVI*DHSSKTLIGASEQKNGVYQFRALLMFSS---AFHIQTVSRS 2292
            +C++Q     F    C I DH+ + LIG   +++G+Y F      S    + H    +  
Sbjct: 214  HCIVQ-----FNSYMCAIQDHT-RELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLE 267

Query: 2293 V*HSRLGHPFDKVLNLLSEIVPHGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSI 2472
            + H R+GHP +KV+ LL  +       S N+ C   F+AK  R    +  + A  IF+ I
Sbjct: 268  LWHKRMGHPSEKVVKLLPPV--SNLKGSLNKACEICFRAKHXRDKFPLSDNKATRIFEKI 325

Query: 2473 QCDLWGPYKEASSCGAFYF 2529
             CDLWG YK  SSCGA YF
Sbjct: 326  HCDLWGSYKHVSSCGARYF 344



 Score = 41.2 bits (95), Expect(3) = 5e-69
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = +3

Query: 2037 SVSLGSKLTLSNVLYVPNLTCNLILVSQL 2123
            SV L + +TL NVLYVP L CNL+ VSQL
Sbjct: 181  SVRLSNNITLQNVLYVPKLNCNLLSVSQL 209


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  196 bits (499), Expect(3) = 6e-69
 Identities = 101/205 (49%), Positives = 128/205 (62%), Gaps = 2/205 (0%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLTIVDD SRA WIYLL  K+E   +   F +MV  QF  ++K +++DNG EF CL   F
Sbjct: 258  FLTIVDDFSRAVWIYLLVDKTEVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYF 317

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
                I+ QT   G PQQN R ERKH HILN+  AL F ++LP+ F GE VL A +LIN T
Sbjct: 318  SATGILFQTSCVGTPQQNGRVERKHKHILNVGRALRFQANLPIYFWGESVLAAAHLINRT 377

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAHTLSK--DKFAPQSRQCIFVGYLPHKK 3061
            PS +L+ KTP E+L G PP Y  +  FGCL FAH      DKFA +SR+C+F+GY   KK
Sbjct: 378  PSPLLHNKTPFEILFGTPPSYAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKK 437

Query: 3062 GWRFFNLVTANISFLMTLCFMKTTF 3136
            GW+ F+L T  +     + F +  F
Sbjct: 438  GWKLFDLDTKELFVSRDVKFFEDVF 462



 Score = 74.7 bits (182), Expect(3) = 6e-69
 Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
 Frame = +1

Query: 2122 YCLLQLSLCIFTDKYCVI*DHSSKTLIGASEQKNGVYQFRALLMFSS---AFHIQTVSRS 2292
            +C++Q     F    C I DH+ + LIG   +++G+Y F      S    + H    +  
Sbjct: 128  HCIVQ-----FNSYMCAIQDHT-RELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLE 181

Query: 2293 V*HSRLGHPFDKVLNLLSEIVPHGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSI 2472
            + H R+GHP +KV+ LL  +       S N+ C   F+AK  R    +  + A  IF+ I
Sbjct: 182  LWHKRMGHPSEKVVKLLPPV--SNLKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKI 239

Query: 2473 QCDLWGPYKEASSCGAFYF 2529
             CDLWG YK  SSCGA YF
Sbjct: 240  HCDLWGSYKHVSSCGARYF 258



 Score = 41.2 bits (95), Expect(3) = 6e-69
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = +3

Query: 2037 SVSLGSKLTLSNVLYVPNLTCNLILVSQL 2123
            SV L + +TL NVLYVP L CNL+ VSQL
Sbjct: 95   SVRLSNNITLQNVLYVPKLNCNLLSVSQL 123


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
            gi|7269049|emb|CAB79159.1| LTR retrotransposon like
            protein [Arabidopsis thaliana]
          Length = 1109

 Score =  211 bits (536), Expect(3) = 4e-68
 Identities = 104/205 (50%), Positives = 135/205 (65%), Gaps = 2/205 (0%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLTIVDD+SR  W+YL+  KSE       F ++V+ QF T IK +R+DNG EF C++  F
Sbjct: 369  FLTIVDDYSRGVWVYLMTDKSETQKHLKDFMALVERQFDTEIKTVRSDNGTEFLCMREYF 428

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
            +   I H+T   G P QN R ERKH HILNIA AL F S+LP+ F GEC+L+A YLIN T
Sbjct: 429  LHKGIAHETSCVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRT 488

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAHTLSK--DKFAPQSRQCIFVGYLPHKK 3061
            PS++L GK+P E+L+   P Y+HLR FG LC+AH  +   DKFA +SR+C+FVGY   +K
Sbjct: 489  PSMLLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQK 548

Query: 3062 GWRFFNLVTANISFLMTLCFMKTTF 3136
            GWR F+L          + F +T F
Sbjct: 549  GWRLFDLEEQKFFVSRDVIFQETEF 573



 Score = 74.3 bits (181), Expect(3) = 4e-68
 Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
 Frame = +1

Query: 2119 NYCLLQLSLCIFTDKYCVI*DHSSKTLIGASEQKNGVYQFRALLMFSSAFHIQTVSRSV* 2298
            N+C++QL+     D + VI D +++ + G  +++NG + FR +   ++          + 
Sbjct: 238  NHCVVQLA-----DHFLVIQDRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKAPFDLW 292

Query: 2299 HSRLGHPFDKVLNLLS-EIVPHGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSIQ 2475
            H RLGH  DK++NLL  E++  G    EN  C +  +AKQTR +  +  + +   F  I 
Sbjct: 293  HRRLGHASDKIVNLLPRELLSSGKEILEN-VCDTCMRAKQTRDTFPLRDNRSMDSFQLIH 351

Query: 2476 CDLWGPYKEASSCGAFYF 2529
            CD+WGPY+  S  GA YF
Sbjct: 352  CDVWGPYRTPSYSGARYF 369



 Score = 24.6 bits (52), Expect(3) = 4e-68
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 1940 HHMTGC*AILHHMHQIAPCNVGLLDGS 2020
            HHMTG   +L  M  ++P  + L DG+
Sbjct: 171  HHMTGNLELLSGMRSMSPVLIILADGN 197



 Score =  132 bits (331), Expect = 1e-27
 Identities = 63/148 (42%), Positives = 96/148 (64%)
 Frame = +3

Query: 819  YTLMSNDNPHLLITHVKLKQKTYEE*AMAMQTALRAKKKLGSIDGTLL*PDADSLEIEEW 998
            Y L + DN   +I+H  LK   YEE A   +TALR++KK G +DGT+  P   S ++E+W
Sbjct: 21   YDLTAADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLEDW 80

Query: 999  WTMNFMIVSWIFNTIEPSLRSTITYVDSTRVLWDDLKQRFLVSNGPRLQENKAAIANCRQ 1178
             T+N ++VSW+  TI+  L + I++ D  R LW+ +++RF VSNGP+ Q+ KA +A C+Q
Sbjct: 81   LTINALLVSWMKMTIDSELLTNISHRDVARDLWEQIRKRFSVSNGPKNQKMKADLATCKQ 140

Query: 1179 TGSTVMTYYARLKKLWDELGAFERVPIC 1262
             G TV  YY +L K+WD + ++  + IC
Sbjct: 141  EGMTVEGYYGKLNKIWDNINSYRPLRIC 168


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  209 bits (532), Expect(3) = 5e-68
 Identities = 103/205 (50%), Positives = 134/205 (65%), Gaps = 2/205 (0%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLTIVDD+SR  W+YL+  KSE       F ++V+ QF T IK +R+DNG EF C++  F
Sbjct: 369  FLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDTEIKTVRSDNGTEFLCMREYF 428

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
            +   I H+T   G P QN R ERKH HILNIA AL F S+LP+ F GEC+L+A YLIN T
Sbjct: 429  LHKGITHETSCVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRT 488

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAHTLSK--DKFAPQSRQCIFVGYLPHKK 3061
            PS++L GK+P E+L+   P Y+HLR FG LC+AH  +   DKF  +SR+C+FVGY   +K
Sbjct: 489  PSMLLQGKSPYEMLYKTAPNYSHLRVFGSLCYAHNQNHKGDKFVARSRRCVFVGYPHGQK 548

Query: 3062 GWRFFNLVTANISFLMTLCFMKTTF 3136
            GWR F+L          + F +T F
Sbjct: 549  GWRLFDLEEQKFFVSRDVIFQETEF 573



 Score = 75.1 bits (183), Expect(3) = 5e-68
 Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
 Frame = +1

Query: 2119 NYCLLQLSLCIFTDKYCVI*DHSSKTLIGASEQKNGVYQFRALLMFSSAFHIQTVSRSV* 2298
            N+C++QL+     D + VI D +++ + G  +++NG + FR +   ++          + 
Sbjct: 238  NHCVVQLA-----DHFLVIQDRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKAPFDLW 292

Query: 2299 HSRLGHPFDKVLNLLS-EIVPHGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSIQ 2475
            H RLGH  DK++NLL  E++  G    EN  C +  +AKQTR +  +  + +   F  I 
Sbjct: 293  HRRLGHASDKIVNLLPRELLSSGKEILEN-VCDTCMRAKQTRDTFPLSDNRSMDSFQLIH 351

Query: 2476 CDLWGPYKEASSCGAFYF 2529
            CD+WGPY+  S  GA YF
Sbjct: 352  CDVWGPYRTPSYSGARYF 369



 Score = 25.0 bits (53), Expect(3) = 5e-68
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 1940 HHMTGC*AILHHMHQIAPCNVGLLDGS 2020
            HHMTG   +L  M  ++P  + L DG+
Sbjct: 171  HHMTGNLELLSDMRSMSPVLIILADGN 197



 Score =  131 bits (330), Expect = 2e-27
 Identities = 62/148 (41%), Positives = 96/148 (64%)
 Frame = +3

Query: 819  YTLMSNDNPHLLITHVKLKQKTYEE*AMAMQTALRAKKKLGSIDGTLL*PDADSLEIEEW 998
            Y L + DN   +I+H  LK   YEE A   +TALR++KK G +DGT+  P   S ++E+W
Sbjct: 21   YDLTAADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLEDW 80

Query: 999  WTMNFMIVSWIFNTIEPSLRSTITYVDSTRVLWDDLKQRFLVSNGPRLQENKAAIANCRQ 1178
             T+N ++VSW+  TI+  L + I++ D  R LW+ +++RF VSNGP+ Q+ KA +A C+Q
Sbjct: 81   LTINALLVSWMKMTIDSELLTNISHRDVARDLWEQIRKRFFVSNGPKNQKMKADLATCKQ 140

Query: 1179 TGSTVMTYYARLKKLWDELGAFERVPIC 1262
             G T+  YY +L K+WD + ++  + IC
Sbjct: 141  EGMTMEGYYGKLNKIWDNINSYRPLRIC 168


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score =  199 bits (506), Expect(3) = 7e-68
 Identities = 101/205 (49%), Positives = 129/205 (62%), Gaps = 2/205 (0%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLTI+DD SRA WIYLL  K+E   +   F +MV  QF  ++K +++DNG EF CL   F
Sbjct: 591  FLTIIDDFSRAVWIYLLVNKTEVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYF 650

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
                I+ QT   G PQQN R ERKH HILN+  ALHF ++LP+ F GE VL A +LIN T
Sbjct: 651  SATGILFQTSCVGTPQQNGRVERKHKHILNVGRALHFQANLPIYFWGESVLAAAHLINRT 710

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAHTLSK--DKFAPQSRQCIFVGYLPHKK 3061
            PS +L+ KTP E+L G PP Y  +  FGCL FAH      DKFA +SR+C+F+GY   KK
Sbjct: 711  PSPLLHNKTPFEILFGTPPSYAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKK 770

Query: 3062 GWRFFNLVTANISFLMTLCFMKTTF 3136
            GW+ F+L T  +     + F +  F
Sbjct: 771  GWKLFDLDTKELFVSRDVKFFEDVF 795



 Score = 71.6 bits (174), Expect(3) = 7e-68
 Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
 Frame = +1

Query: 2122 YCLLQLSLCIFTDKYCVI*DHSSKTLIGASEQKNGVYQFRALLMFSS---AFHIQTVSRS 2292
            +C++Q     F    C I DH+ + LIG   +++G+Y F      S    + H    +  
Sbjct: 461  HCIVQ-----FNSYMCAIQDHT-RELIGTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLE 514

Query: 2293 V*HSRLGHPFDKVLNLLSEIVPHGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSI 2472
            + H R+GHP +KV+ LL  +       S N+ C   F+AK  R    +  + A  IF+ I
Sbjct: 515  LWHKRMGHPSEKVVKLLPPV--SNLKGSLNKACEICFRAKHPRDKFPLTDNKATRIFEKI 572

Query: 2473 QCDLWGPYKEASSCGAFYF 2529
             CDLWG YK  SSC A YF
Sbjct: 573  HCDLWGSYKHVSSCAARYF 591



 Score = 38.1 bits (87), Expect(3) = 7e-68
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = +3

Query: 2037 SVSLGSKLTLSNVLYVPNLTCNLILVSQL 2123
            SV L + +TL NVLYV  L CNL+ VSQL
Sbjct: 428  SVRLSNNITLKNVLYVSKLNCNLLSVSQL 456



 Score =  140 bits (352), Expect(2) = 1e-30
 Identities = 81/233 (34%), Positives = 138/233 (59%), Gaps = 4/233 (1%)
 Frame = +3

Query: 819  YTLMSNDNPHLLITHVKLKQKTYEE*AMAMQTALR-AKKKLGSIDGTLL*PDADSLEIEE 995
            + L + D P   IT  +L+   Y++ A  +Q AL  +++K   ++GT+  P     +  +
Sbjct: 21   FFLGTGDRPGDFITPTRLRGDNYDDWASDIQLALAGSRRKFEFLEGTITGPQPPYTQ-SD 79

Query: 996  WWTMNFMIVSWIFNTIEPSLRSTITYVDSTRVLWDDLKQRFLVSNGPRLQENKAAIANCR 1175
            W T+N M+VSWI NTI+P ++ST++     + LW+ LKQR+ + NGPR+Q+ K +IA C 
Sbjct: 80   WNTVNAMLVSWITNTIDPEVKSTLSKFRDAKRLWEHLKQRYAMVNGPRIQQLKTSIAKCE 139

Query: 1176 QTGS-TVMTYYARLKKLWDELGAFERVPICQGKGCHCNITTELIKCQEEE-KVHQLLMGL 1349
            Q+ S +V TYY +L  LW+EL  F+  P+     C       L + + E+ K+H  LMGL
Sbjct: 140  QSKSMSVTTYYGKLNVLWEEL--FKHEPLISCTCCSSCTAASLHQARREQGKLHDFLMGL 197

Query: 1350 DQTIFRTVSSSILSIEPLPTISHAYSMLIREER-HHAIVQGKDE*VEAIGLAM 1505
            +  ++  + ++ILS +PLP++  AY ++I+++R   A    +D+  E +G A+
Sbjct: 198  NTDLYAQLRTNILSQDPLPSLDRAYQLVIQDKRVRLAKAVTEDKPAEVLGFAV 250



 Score = 23.1 bits (48), Expect(2) = 1e-30
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2

Query: 1562 CQKSGHDTNTAFKL 1603
            C+K+GH+T+T + L
Sbjct: 269  CKKTGHETSTCWSL 282


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score =  193 bits (491), Expect(3) = 7e-68
 Identities = 102/207 (49%), Positives = 129/207 (62%), Gaps = 4/207 (1%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTC--LKG 2701
            FLTIVDDHSR  WIYL+ +KSE   I   FC M + QF   +K IR+DNG+EF    +  
Sbjct: 466  FLTIVDDHSRGVWIYLMKEKSETKDILQNFCFMTKTQFDKPVKCIRSDNGLEFCXGQMMS 525

Query: 2702 LFVDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLIN 2881
             +    I+ ++ +   PQ N R ERKH HILNIA  L F + LP+ F GECVLTA YLIN
Sbjct: 526  FYKREGILRESSLVNTPQXNGRVERKHQHILNIARTLRFQACLPIDFWGECVLTAAYLIN 585

Query: 2882 HTPSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAH--TLSKDKFAPQSRQCIFVGYLPH 3055
             TP+ +L+GKTP E+L G+ P Y HLR FG LC+AH  + S DKF  +SR+C F GY   
Sbjct: 586  RTPTPILDGKTPYEILFGEKPNYEHLRVFGSLCYAHKKSRSNDKFDXRSRRCXFXGYPYG 645

Query: 3056 KKGWRFFNLVTANISFLMTLCFMKTTF 3136
            KKGW+  +L T        + F +T F
Sbjct: 646  KKGWKLXDLETKEQFESRDVIFHETIF 672



 Score = 76.3 bits (186), Expect(3) = 7e-68
 Identities = 44/126 (34%), Positives = 64/126 (50%)
 Frame = +1

Query: 2152 FTDKYCVI*DHSSKTLIGASEQKNGVYQFRALLMFSSAFHIQTVSRSV*HSRLGHPFDKV 2331
            FTD +CVI D +S+  IG  + +NGVY ++ L               + H RLGHP D+V
Sbjct: 341  FTDSFCVIQDRTSRNPIGVGKLRNGVYYYKPLQGEKVNAVKVEEKYELWHRRLGHPSDRV 400

Query: 2332 LNLLSEIVPHGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSIQCDLWGPYKEASS 2511
            L  +  +  +     E+  C S  + KQ R S  +    A  IF+ I  D+WGPY+  ++
Sbjct: 401  LASIHSLGNNVMKGIEDYVCDSCCRGKQVRNSFQLSNKRAFEIFNLIHVDIWGPYRTPTT 460

Query: 2512 CGAFYF 2529
             GA YF
Sbjct: 461  SGAHYF 466



 Score = 39.3 bits (90), Expect(3) = 7e-68
 Identities = 19/38 (50%), Positives = 23/38 (60%)
 Frame = +3

Query: 2040 VSLGSKLTLSNVLYVPNLTCNLILVSQLLSTTAFTMHF 2153
            V L   L L NVLYVP+L CNLI + QLL    + + F
Sbjct: 304  VKLSKDLCLKNVLYVPSLKCNLISIGQLLKEKDYIVTF 341



 Score =  129 bits (324), Expect = 9e-27
 Identities = 57/128 (44%), Positives = 85/128 (66%)
 Frame = +3

Query: 1092 LWDDLKQRFLVSNGPRLQENKAAIANCRQTGSTVMTYYARLKKLWDELGAFERVPICQGK 1271
            +W+DLK+R+ V N PR+ + ++ I N +Q G TV  YYA++K +WDEL  +  +P C   
Sbjct: 1    MWEDLKERYAVGNAPRVHQLRSEIVNLKQEGMTVAAYYAKIKGMWDELNQYIEIPECT-- 58

Query: 1272 GCHCNITTELIKCQEEEKVHQLLMGLDQTIFRTVSSSILSIEPLPTISHAYSMLIREERH 1451
               C     ++K +E+EK HQ LMGLD T F TV SSIL+++PLPT+   Y+M+ +EERH
Sbjct: 59   ---CGAAQAIVKSREDEKAHQFLMGLDDTTFGTVRSSILALDPLPTLGKIYAMVTQEERH 115

Query: 1452 HAIVQGKD 1475
             ++ +G D
Sbjct: 116  RSMARGAD 123


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  203 bits (517), Expect(2) = 7e-68
 Identities = 101/188 (53%), Positives = 127/188 (67%), Gaps = 3/188 (1%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEF-CHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGL 2704
            FLTI+DD+SR  W+YLL  KSE  CH+   F +M   QF   IK +R+DNG EF CL   
Sbjct: 469  FLTIIDDYSRGVWLYLLNDKSEAPCHLK-NFFAMTDRQFNVKIKTVRSDNGTEFLCLTKF 527

Query: 2705 FVDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINH 2884
            F +  +IH+      P++N R ERKH H+LN+A AL F ++LP+ F GECVLTA YLIN 
Sbjct: 528  FQEQGVIHERSCVATPERNDRVERKHRHLLNVARALRFQANLPIQFWGECVLTAAYLINR 587

Query: 2885 TPSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAHTLSK--DKFAPQSRQCIFVGYLPHK 3058
            TPS VLN  TP E LH K P + HLR FG LC+AH  ++  DKFA +SR+C+FVGY   +
Sbjct: 588  TPSSVLNDSTPYERLHKKQPRFDHLRVFGSLCYAHNRNRGGDKFAERSRRCVFVGYPHGQ 647

Query: 3059 KGWRFFNL 3082
            KGWR F+L
Sbjct: 648  KGWRLFDL 655



 Score = 84.3 bits (207), Expect(2) = 7e-68
 Identities = 48/137 (35%), Positives = 76/137 (55%)
 Frame = +1

Query: 2119 NYCLLQLSLCIFTDKYCVI*DHSSKTLIGASEQKNGVYQFRALLMFSSAFHIQTVSRSV* 2298
            N C+LQ+S     D++ V+ D +S+ ++GA  +  G + FR+  + +S    +  +  + 
Sbjct: 338  NRCVLQMS-----DRFLVVQDRTSRMVMGAGRRVGGTFHFRSTEIAASVTVKEEKNYELW 392

Query: 2299 HSRLGHPFDKVLNLLSEIVPHGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSIQC 2478
            HSR+GHP  +V++L+ E     S    N+ C    +AKQTR S  +  +    IF+ I C
Sbjct: 393  HSRMGHPAARVVSLIPESSVSVSSTHLNKACDVCHRAKQTRNSFPLSINKTLRIFELIYC 452

Query: 2479 DLWGPYKEASSCGAFYF 2529
            DLWGPY+  S  GA YF
Sbjct: 453  DLWGPYRTPSHTGARYF 469



 Score = 60.5 bits (145), Expect = 5e-06
 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
 Frame = +3

Query: 1155 AAIANCRQTGSTVMTYYARLKK--LWDELGAFERVPICQGKGCHCNITTELIKCQEEEKV 1328
            A I++   TGS    +   +K   LW    AF+ V IC+  GC C++     K +EE+KV
Sbjct: 41   AVISHPLLTGSNYDEWACSMKTALLWL---AFKPVRICKCGGCVCDLGALQEKDREEDKV 97

Query: 1329 HQLLMGLDQTIFRTVSSSILSIEPLPTISHAYSMLIREE 1445
            H+ L GLD  +FRTV SS++S  P+  +   Y+++ +EE
Sbjct: 98   HEFLSGLDDALFRTVRSSLVSRIPVQPLEEVYNIVRQEE 136


>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
          Length = 1191

 Score =  195 bits (496), Expect(3) = 9e-67
 Identities = 100/205 (48%), Positives = 128/205 (62%), Gaps = 2/205 (0%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLTIVDD SRA WIYLL  K++   +   F +MV  QF  ++K +++DNG EF CL   F
Sbjct: 303  FLTIVDDFSRAVWIYLLVDKTDVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYF 362

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
                I+ QT   G PQQN R ERKH HILN+  AL F ++LP+ F GE VL A +LIN T
Sbjct: 363  SATGILFQTSCVGTPQQNGRVERKHKHILNVGRALRFQANLPIYFWGESVLAAAHLINRT 422

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAHTLSK--DKFAPQSRQCIFVGYLPHKK 3061
            PS +L+ KTP E+L G PP Y  +  FGCL FAH      DKFA +SR+C+F+GY   KK
Sbjct: 423  PSPLLHNKTPFEILFGTPPSYAAIHTFGCLSFAHDKKSKGDKFASRSRKCVFLGYPFGKK 482

Query: 3062 GWRFFNLVTANISFLMTLCFMKTTF 3136
            GW+ F+L T  +     + F +  F
Sbjct: 483  GWKLFDLDTKELFVSRDVKFFEDVF 507



 Score = 68.6 bits (166), Expect(3) = 9e-67
 Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
 Frame = +1

Query: 2122 YCLLQLSLCIFTDKYCVI*DHSSKTLIGASEQKNGVYQFRALLMFSS---AFHIQTVSRS 2292
            +C++Q     F    C I DH+ + LI    +++G+Y F      S    + H    +  
Sbjct: 173  HCIVQ-----FNSYMCAIQDHT-RELIRTGVRRDGLYYFGGAEGDSVQHVSVHNAASTLE 226

Query: 2293 V*HSRLGHPFDKVLNLLSEIVPHGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSI 2472
            + H R+ HP +KV+ LL  +       S N+ C   F+AK  R    +  + A  IF+ I
Sbjct: 227  LWHKRMRHPSEKVVKLLPPV--SNLKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKI 284

Query: 2473 QCDLWGPYKEASSCGAFYF 2529
             CDLWG YK  SSCGA YF
Sbjct: 285  HCDLWGSYKHVSSCGARYF 303



 Score = 41.2 bits (95), Expect(3) = 9e-67
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = +3

Query: 2037 SVSLGSKLTLSNVLYVPNLTCNLILVSQL 2123
            SV L + +TL NVLYVP L CNL+ VSQL
Sbjct: 140  SVRLSNNITLKNVLYVPKLNCNLLSVSQL 168


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  211 bits (537), Expect(2) = 3e-64
 Identities = 104/205 (50%), Positives = 135/205 (65%), Gaps = 2/205 (0%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLTIVDD+SR  W+YL+  KSE       F ++V+ QF T IK +R+DNG EF C++  F
Sbjct: 593  FLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDTEIKIVRSDNGTEFLCMREYF 652

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
            +   I H+T   G P QN R ERKH HILNIA AL F S+LP+ F GEC+L+A YLIN T
Sbjct: 653  LHKGIAHETSCVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRT 712

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAHTLSK--DKFAPQSRQCIFVGYLPHKK 3061
            PS++L GK+P E+L+   P Y+HLR FG LC+AH  +   DKFA +SR+C+FVGY   +K
Sbjct: 713  PSMLLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQK 772

Query: 3062 GWRFFNLVTANISFLMTLCFMKTTF 3136
            GWR F+L          + F +T F
Sbjct: 773  GWRLFDLEEQKFFVSRDVIFQETEF 797



 Score = 64.3 bits (155), Expect(2) = 3e-64
 Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
 Frame = +1

Query: 2158 DKYCVI*DHSSKTLIGASEQKNGVYQFRALLMFSSAFHIQTVSRSV*HSRLGHPFDKVLN 2337
            + +CV  D +++ +    +++NG + FR +   ++          + H RLGH  DK++N
Sbjct: 472  ENHCV--DRTTRMVTRIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVN 529

Query: 2338 LLS-EIVPHGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSIQCDLWGPYKEASSC 2514
            LL  E++  G    EN  C +  +AKQTR +  +  + +   F  I CD+WGPY+  S  
Sbjct: 530  LLPRELLSSGKEILEN-VCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRAPSYS 588

Query: 2515 GAFYF 2529
            GA YF
Sbjct: 589  GARYF 593



 Score =  178 bits (451), Expect = 2e-41
 Identities = 87/209 (41%), Positives = 135/209 (64%)
 Frame = +3

Query: 819  YTLMSNDNPHLLITHVKLKQKTYEE*AMAMQTALRAKKKLGSIDGTLL*PDADSLEIEEW 998
            Y L + DN   +I+H  LK   YEE A   +TALR++KK G +DGT+  P   S ++E+W
Sbjct: 21   YDLTAADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLEDW 80

Query: 999  WTMNFMIVSWIFNTIEPSLRSTITYVDSTRVLWDDLKQRFLVSNGPRLQENKAAIANCRQ 1178
             T+N ++VSW+  TI+  L + I++ D  R LW+ +++RF VSNGP+ Q+ KA +A C+Q
Sbjct: 81   LTINALLVSWMKMTIDSELLTNISHRDVARDLWEQIRKRFSVSNGPKNQKMKADLATCKQ 140

Query: 1179 TGSTVMTYYARLKKLWDELGAFERVPICQGKGCHCNITTELIKCQEEEKVHQLLMGLDQT 1358
             G TV  YY +L K+WD + ++  + IC+   C CN+ T+  K +E++ VHQ L GL++T
Sbjct: 141  EGMTVEGYYGKLNKIWDNINSYRPLRICKCGRCICNLGTDQEKYREDDMVHQYLYGLNET 200

Query: 1359 IFRTVSSSILSIEPLPTISHAYSMLIREE 1445
             F T+ SS+ S  PLP +   Y+++ +EE
Sbjct: 201  KFHTIRSSLTSRVPLPGLEEVYNIVRQEE 229


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score =  197 bits (501), Expect(2) = 2e-63
 Identities = 98/187 (52%), Positives = 121/187 (64%), Gaps = 2/187 (1%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLTIVDD SRA W YLL  KSE   +   F    + QF  S+K +R+DNG EF CL   F
Sbjct: 167  FLTIVDDFSRAVWTYLLLAKSEVRTVLTNFLVYTEKQFGKSVKVLRSDNGTEFMCLASYF 226

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
             +H I+HQT   G PQQN R ERKH HILN+A A+ F + LP+ F GE VLTA YLIN T
Sbjct: 227  REHGIVHQTSCVGTPQQNGRVERKHRHILNVARAILFQASLPIQFWGEAVLTAAYLINRT 286

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAHTLS--KDKFAPQSRQCIFVGYLPHKK 3061
            P+ + NG +P E+LH   P Y HLR FG  C+ H  S  KDKF  +SR C+F+GY   +K
Sbjct: 287  PTSLHNGLSPYEILHNSKPNYEHLRVFGSACYVHRASRDKDKFGERSRLCVFIGYPFAQK 346

Query: 3062 GWRFFNL 3082
            GW+ F++
Sbjct: 347  GWKVFDM 353



 Score = 75.5 bits (184), Expect(2) = 2e-63
 Identities = 51/136 (37%), Positives = 75/136 (55%), Gaps = 2/136 (1%)
 Frame = +1

Query: 2128 LLQLSLCIFTDKYCVI*DHSSKTLIGASEQKNGVYQFRALLMFSSAFHIQTVS--RSV*H 2301
            L+ L+L     K C + D  S+TLIG+ E+++GVY    +   ++  H   VS  +++ H
Sbjct: 36   LVTLTLTHENLKACKL-DRFSRTLIGSGEERDGVYYLTDVA--TAKIHTAKVSSDQALWH 92

Query: 2302 SRLGHPFDKVLNLLSEIVPHGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSIQCD 2481
             RLGHP   VL+ L  ++   S    ++ C   F+AKQTR    V  + +   F  I CD
Sbjct: 93   QRLGHPSFSVLSSLP-VLTSSSLSVGSRSCDVCFRAKQTREVFPVSTNKSIECFSLIHCD 151

Query: 2482 LWGPYKEASSCGAFYF 2529
            +WGPY+  SSCGA YF
Sbjct: 152  VWGPYRVPSSCGAVYF 167


>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
          Length = 1196

 Score =  192 bits (488), Expect(2) = 1e-59
 Identities = 100/205 (48%), Positives = 126/205 (61%), Gaps = 2/205 (0%)
 Frame = +2

Query: 2528 FLTIVDDHSRASWIYLLAQKSEFCHISPKFCSMVQNQFQTSIKYIRTDNGIEFTCLKGLF 2707
            FLTIVDD SRA WIYLL  K+E   +   F +MV  QF   +K +++DNG EF CL   F
Sbjct: 471  FLTIVDDFSRAVWIYLLVDKTEVFQMFMSFIAMVDQQFSQIVKVVQSDNGTEFKCLLDYF 530

Query: 2708 VDHEIIHQTIIAGHPQQNSRAERKHHHILNIASALHF*SHLPVTF*GECVLTAGYLINHT 2887
                I+ QT   G PQQN R ERKH HILN+  AL F ++LP+ F GE VL A +LIN T
Sbjct: 531  SATGILFQTSCVGTPQQNGRVERKHKHILNVGRALRFQANLPIYFWGESVLAAAHLINXT 590

Query: 2888 PSIVLNGKTP*ELLHGKPPCYTHLRNFGCLCFAHTLSK--DKFAPQSRQCIFVGYLPHKK 3061
            PS +L+ KTP E+L G PP Y  +  FGCL FAH      DKFA +SR+C+F+GY   KK
Sbjct: 591  PSPLLHNKTPFEILFGTPPSYAAIHTFGCLSFAHDKKSKGDKFASRSRKCVFLGYPFGKK 650

Query: 3062 GWRFFNLVTANISFLMTLCFMKTTF 3136
            GW+  +L T  +     + F +  F
Sbjct: 651  GWKLXDLDTKELFVSRDVKFFEDVF 675



 Score = 68.2 bits (165), Expect(2) = 1e-59
 Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
 Frame = +1

Query: 2188 SKTLIGASEQKNGVYQFRALLMFSS---AFHIQTVSRSV*HSRLGHPFDKVLNLLSEIVP 2358
            ++ LIG   +++G+Y F      S    + H    +  + H R+GHP +KV+ LL  +  
Sbjct: 357  TRELIGTGVRRDGLYYFDGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPV-- 414

Query: 2359 HGSHPSENQYCVSSFQAKQTRYSHFVGFS*AHTIFDSIQCDLWGPYKEASSCGAFYF 2529
                 S N+ C   F+AK  R    +  + A  IF+ I CDLWG YK  SSCGA YF
Sbjct: 415  SNLKGSLNKACEICFRAKHPRDKFPLSDNKATRIFEKIHCDLWGSYKHVSSCGARYF 471



 Score =  119 bits (297), Expect(2) = 7e-24
 Identities = 64/167 (38%), Positives = 104/167 (62%), Gaps = 3/167 (1%)
 Frame = +3

Query: 1014 MIVSWIFNTIEPSLRSTITYVDSTRVLWDDLKQRFLVSNGPRLQENKAAIANCRQTGS-T 1190
            M+VSWI NTI+P ++ST++     + LW+ LKQR+ + NGPR+Q+ K +IA C Q+ S +
Sbjct: 1    MLVSWITNTIDPEVKSTLSKFRDAKRLWEHLKQRYAMVNGPRIQQLKTSIAKCEQSKSMS 60

Query: 1191 VMTYYARLKKLWDELGAFERVPICQGKGCHCNITTELIKCQEEE-KVHQLLMGLDQTIFR 1367
            V TYY +L  LW+EL  F+  P+     C       L + + E+ K+H  LMGL+  ++ 
Sbjct: 61   VTTYYGKLNVLWEEL--FKHEPLISCTCCSSCTAASLHQARREQGKLHDFLMGLNTDLYA 118

Query: 1368 TVSSSILSIEPLPTISHAYSMLIREER-HHAIVQGKDE*VEAIGLAM 1505
             + ++ILS +PLP++  AY ++I++ER   A    +D+  E +G A+
Sbjct: 119  QLXTNILSQDPLPSLDRAYQLVIQDERVRLAKAVTEDKPAEVLGFAV 165



 Score = 21.6 bits (44), Expect(2) = 7e-24
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 1562 CQKSGHDTNTAFKL 1603
            C K GHD N  +++
Sbjct: 203  CHKHGHDKNNCYEI 216