BLASTX nr result
ID: Rauwolfia21_contig00019671
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00019671
(729 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 236 4e-60
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 235 1e-59
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 233 4e-59
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 233 6e-59
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 230 3e-58
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 230 4e-58
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 226 5e-57
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 226 5e-57
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 225 1e-56
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 224 3e-56
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 224 3e-56
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 223 7e-56
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 222 1e-55
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] 219 6e-55
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 216 6e-54
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 216 8e-54
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 215 1e-53
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 214 2e-53
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 211 3e-52
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 204 2e-50
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 236 bits (603), Expect = 4e-60
Identities = 116/214 (54%), Positives = 148/214 (69%)
Frame = +1
Query: 85 VKLQDYVCHTVTCLKSHSRSSFHDHSGQCSYPIHKYDSCANFSLKHVSFLATIAVETEPT 264
+KL+++V +TV+ S + S YPI KY C F+ H +FLA + EPT
Sbjct: 906 MKLKNFVTNTVSV-----ESISPEASSSSLYPIEKYVDCHRFTSSHKAFLAAVTAGMEPT 960
Query: 265 KFSDAMQHPKWRGAMSLEIKALEKNGTWIMTDLPPGKHVLGSKWVYRIKRKTDGSIE*YK 444
+++AM WR AMS EI++L N T+ + +LPPGK LG+KWVY+IK ++DG+IE YK
Sbjct: 961 TYNEAMVDKAWREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDGAIERYK 1020
Query: 445 ARLVILGNTQTEGIDYNETFAPMVKMGTVRLLLAVAVTKNWKVH*MDIHNAFLHGDLEEE 624
ARLV+LGN Q EG+DY+ETFAP+ KM TVRL L VA ++W VH MD+HNAFLHGDL+EE
Sbjct: 1021 ARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEE 1080
Query: 625 VYMCLPPSFHTTQSSKLCRLQKSLYDLKQAPCCW 726
VYM LP F SK+CRL KSLY LKQAP CW
Sbjct: 1081 VYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCW 1114
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 235 bits (600), Expect = 1e-59
Identities = 114/214 (53%), Positives = 145/214 (67%)
Frame = +1
Query: 85 VKLQDYVCHTVTCLKSHSRSSFHDHSGQCSYPIHKYDSCANFSLKHVSFLATIAVETEPT 264
V L+D+V HTV + H YPI Y +C NFS+ + FLATI +P
Sbjct: 611 VLLRDFVTHTVVAESPSPATPXPQHPSGTPYPIAHYINCDNFSVHYRKFLATIISSNDPK 670
Query: 265 KFSDAMQHPKWRGAMSLEIKALEKNGTWIMTDLPPGKHVLGSKWVYRIKRKTDGSIE*YK 444
F +AM+ W+ +M EI+ALE+NGTW + LP GK LGS+WVYR K ++G IE K
Sbjct: 671 SFKEAMKDVGWQKSMHEEIRALEENGTWTLEPLPKGKRALGSQWVYRTKYFSNGDIERLK 730
Query: 445 ARLVILGNTQTEGIDYNETFAPMVKMGTVRLLLAVAVTKNWKVH*MDIHNAFLHGDLEEE 624
+RLV+LGN Q GIDY+ETF+P+ KM TVR LA+A +KNW++H MD+HNAFLHGDLEEE
Sbjct: 731 SRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEE 790
Query: 625 VYMCLPPSFHTTQSSKLCRLQKSLYDLKQAPCCW 726
VYM LPP F + + +CRL+KSLY LKQAP CW
Sbjct: 791 VYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCW 824
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 233 bits (595), Expect = 4e-59
Identities = 112/214 (52%), Positives = 144/214 (67%)
Frame = +1
Query: 85 VKLQDYVCHTVTCLKSHSRSSFHDHSGQCSYPIHKYDSCANFSLKHVSFLATIAVETEPT 264
V L+D+V HTV + F H YPI Y +C NFS+ + FLA I +P
Sbjct: 606 VLLRDFVTHTVVAESPSPATPFPQHPSSTPYPIAHYINCDNFSVHYRKFLAAIISSNDPK 665
Query: 265 KFSDAMQHPKWRGAMSLEIKALEKNGTWIMTDLPPGKHVLGSKWVYRIKRKTDGSIE*YK 444
F +AM+ W+ +M EI+ALE+NGTW + LP GK LGS+WVYR K ++ IE K
Sbjct: 666 SFKEAMKDVSWQKSMHEEIRALEENGTWTLEXLPKGKRALGSQWVYRTKYFSNDDIERLK 725
Query: 445 ARLVILGNTQTEGIDYNETFAPMVKMGTVRLLLAVAVTKNWKVH*MDIHNAFLHGDLEEE 624
+RLV+LGN Q GIDY+ETF+P+ KM TVR LA+A +KNW++H MD+HNAF HGDLEEE
Sbjct: 726 SRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFSHGDLEEE 785
Query: 625 VYMCLPPSFHTTQSSKLCRLQKSLYDLKQAPCCW 726
VYM LPP F ++ + +CRL+KSLY LKQAP CW
Sbjct: 786 VYMKLPPGFESSDPNLVCRLRKSLYGLKQAPRCW 819
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 233 bits (593), Expect = 6e-59
Identities = 113/214 (52%), Positives = 144/214 (67%)
Frame = +1
Query: 85 VKLQDYVCHTVTCLKSHSRSSFHDHSGQCSYPIHKYDSCANFSLKHVSFLATIAVETEPT 264
V L+D+V HTV + H YPI Y +C NFS+ + FLATI +P
Sbjct: 532 VLLRDFVTHTVVAESPSPATPSPQHPSGTPYPIAHYINCDNFSVHYRKFLATIISSNDPK 591
Query: 265 KFSDAMQHPKWRGAMSLEIKALEKNGTWIMTDLPPGKHVLGSKWVYRIKRKTDGSIE*YK 444
F +AM+ W+ +M EI+ALE+NGTW + LP GK LGS+WVYR K ++G IE K
Sbjct: 592 SFKEAMKDVGWQKSMHEEIRALEENGTWXLEPLPKGKRALGSQWVYRTKYFSNGDIERLK 651
Query: 445 ARLVILGNTQTEGIDYNETFAPMVKMGTVRLLLAVAVTKNWKVH*MDIHNAFLHGDLEEE 624
+RLV+LGN Q GIDY+ETF+P+ KM VR LA+A +KNW++H MD+HNAFLHGDLEEE
Sbjct: 652 SRLVVLGNHQEAGIDYHETFSPVAKMTMVRAFLAIAASKNWELHQMDVHNAFLHGDLEEE 711
Query: 625 VYMCLPPSFHTTQSSKLCRLQKSLYDLKQAPCCW 726
VYM LPP F + + +CRL+KSLY LKQAP CW
Sbjct: 712 VYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCW 745
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 230 bits (587), Expect = 3e-58
Identities = 112/214 (52%), Positives = 144/214 (67%)
Frame = +1
Query: 85 VKLQDYVCHTVTCLKSHSRSSFHDHSGQCSYPIHKYDSCANFSLKHVSFLATIAVETEPT 264
V L+D+V HTV + H YPI Y +C NFS+ + FLA I +
Sbjct: 894 VLLRDFVTHTVVAESPSPATPSPQHPSGTPYPIAHYINCDNFSVHYRKFLAAIISSNDHK 953
Query: 265 KFSDAMQHPKWRGAMSLEIKALEKNGTWIMTDLPPGKHVLGSKWVYRIKRKTDGSIE*YK 444
F +AM+ W+ +M EI+ALE+NGTW + LP GK LGS+WVYR K ++G IE K
Sbjct: 954 SFKEAMKDVGWQKSMHEEIRALEENGTWTLEPLPKGKRALGSQWVYRTKYFSNGDIERLK 1013
Query: 445 ARLVILGNTQTEGIDYNETFAPMVKMGTVRLLLAVAVTKNWKVH*MDIHNAFLHGDLEEE 624
+RLV+LGN Q GIDY+ETF+P+ KM TVR LA+A +KNW++H MD+HNAFLHGDLEEE
Sbjct: 1014 SRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEE 1073
Query: 625 VYMCLPPSFHTTQSSKLCRLQKSLYDLKQAPCCW 726
VYM LPP F ++ + +CRL+KSLY LKQAP CW
Sbjct: 1074 VYMKLPPGFESSDPNLVCRLRKSLYGLKQAPRCW 1107
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 230 bits (586), Expect = 4e-58
Identities = 112/214 (52%), Positives = 143/214 (66%)
Frame = +1
Query: 85 VKLQDYVCHTVTCLKSHSRSSFHDHSGQCSYPIHKYDSCANFSLKHVSFLATIAVETEPT 264
V L+D+V HTV + H YPI Y +C NFS+ + FLA I +P
Sbjct: 562 VLLRDFVTHTVVAESPSPATPSPQHPSGTPYPIAHYINCDNFSVHYRKFLAAIISSNDPK 621
Query: 265 KFSDAMQHPKWRGAMSLEIKALEKNGTWIMTDLPPGKHVLGSKWVYRIKRKTDGSIE*YK 444
F +AM+ W+ +M EI+ALE+NG W + LP GK LGS+WVYR K ++G IE K
Sbjct: 622 SFKEAMKDVGWQKSMHEEIQALEENGMWTLEPLPKGKRALGSQWVYRTKYFSNGDIERLK 681
Query: 445 ARLVILGNTQTEGIDYNETFAPMVKMGTVRLLLAVAVTKNWKVH*MDIHNAFLHGDLEEE 624
+RLV+LGN Q GIDY+ETF+P+ KM TVR LA+A +KNW++H MD+HNAFLHGDLEEE
Sbjct: 682 SRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEE 741
Query: 625 VYMCLPPSFHTTQSSKLCRLQKSLYDLKQAPCCW 726
VYM LPP F ++ + +CRL KSLY LKQAP CW
Sbjct: 742 VYMKLPPGFESSDPNLVCRLWKSLYGLKQAPRCW 775
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 226 bits (577), Expect = 5e-57
Identities = 114/230 (49%), Positives = 152/230 (66%), Gaps = 16/230 (6%)
Frame = +1
Query: 85 VKLQDYVCHTVTCLKSHSRS----------------SFHDHSGQCSYPIHKYDSCANFSL 216
V L+D+V +T + K+ S + S SG+ YP+ + + + +S
Sbjct: 913 VLLKDFVTNTTSKKKTASHNIHSPSQVLPSGLPTSLSADSVSGKTLYPLSDFLTNSGYSA 972
Query: 217 KHVSFLATIAVETEPTKFSDAMQHPKWRGAMSLEIKALEKNGTWIMTDLPPGKHVLGSKW 396
H++F+A I EP F DA+ +W AMS EI ALE N TW +TDLP GK + SKW
Sbjct: 973 NHIAFMAAILDSNEPKHFKDAILIKEWCEAMSKEIDALEANHTWDITDLPHGKKAISSKW 1032
Query: 397 VYRIKRKTDGSIE*YKARLVILGNTQTEGIDYNETFAPMVKMGTVRLLLAVAVTKNWKVH 576
VY++K +DG++E +KARLV++GN Q EG+D+ ETFAP+ K+ TVR +LAVA K+W+VH
Sbjct: 1033 VYKLKYNSDGTLERHKARLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAAKDWEVH 1092
Query: 577 *MDIHNAFLHGDLEEEVYMCLPPSFHTTQSSKLCRLQKSLYDLKQAPCCW 726
MD+HNAFLHGDLEEEVYM LPP F + SK+CRL+KSLY LKQAP CW
Sbjct: 1093 QMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCW 1142
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 226 bits (577), Expect = 5e-57
Identities = 114/230 (49%), Positives = 152/230 (66%), Gaps = 16/230 (6%)
Frame = +1
Query: 85 VKLQDYVCHTVTCLKSHSRS----------------SFHDHSGQCSYPIHKYDSCANFSL 216
V L+D+V +T + K+ S + S SG+ YP+ + + + +S
Sbjct: 193 VLLKDFVTNTTSKKKTASHNIHSPSQVLPSGLPTSLSADSVSGKTLYPLSDFLTNSGYSA 252
Query: 217 KHVSFLATIAVETEPTKFSDAMQHPKWRGAMSLEIKALEKNGTWIMTDLPPGKHVLGSKW 396
H++F+A I EP F DA+ +W AMS EI ALE N TW +TDLP GK + SKW
Sbjct: 253 NHIAFMAAILDSNEPKHFKDAILIKEWCEAMSKEIDALEANHTWDITDLPHGKKAISSKW 312
Query: 397 VYRIKRKTDGSIE*YKARLVILGNTQTEGIDYNETFAPMVKMGTVRLLLAVAVTKNWKVH 576
VY++K +DG++E +KARLV++GN Q EG+D+ ETFAP+ K+ TVR +LAVA K+W+VH
Sbjct: 313 VYKLKYNSDGTLERHKARLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAAKDWEVH 372
Query: 577 *MDIHNAFLHGDLEEEVYMCLPPSFHTTQSSKLCRLQKSLYDLKQAPCCW 726
MD+HNAFLHGDLEEEVYM LPP F + SK+CRL+KSLY LKQAP CW
Sbjct: 373 QMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCW 422
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 225 bits (573), Expect = 1e-56
Identities = 109/214 (50%), Positives = 147/214 (68%)
Frame = +1
Query: 85 VKLQDYVCHTVTCLKSHSRSSFHDHSGQCSYPIHKYDSCANFSLKHVSFLATIAVETEPT 264
V+L+DY ++ C S + D+ G C YP+ Y S FS + FLA I++ P
Sbjct: 880 VRLKDYQTYSAQC---ESTQTLSDNIGTCIYPMANYVSGEIFSPSNQHFLAAISMVDPPQ 936
Query: 265 KFSDAMQHPKWRGAMSLEIKALEKNGTWIMTDLPPGKHVLGSKWVYRIKRKTDGSIE*YK 444
++ A++ +WR A+ E+ ALE GTW +T LP G +GSKWV+RIK ++G++E YK
Sbjct: 937 TYNQAIREKEWRNAVFFEVDALEDQGTWDITKLPQGVKAIGSKWVFRIKYNSNGTVERYK 996
Query: 445 ARLVILGNTQTEGIDYNETFAPMVKMGTVRLLLAVAVTKNWKVH*MDIHNAFLHGDLEEE 624
ARLV LGN Q EGID+ +TFAP+VKM TVRLLL VA K+W++H MD+HNAFLHGDL+E+
Sbjct: 997 ARLVALGNHQKEGIDFTKTFAPVVKMQTVRLLLDVAAAKDWELHQMDVHNAFLHGDLKED 1056
Query: 625 VYMCLPPSFHTTQSSKLCRLQKSLYDLKQAPCCW 726
+YM PP F TT S +C+L+KS+Y LKQAP CW
Sbjct: 1057 IYMKPPPGFKTTDPSLVCKLKKSIYGLKQAPRCW 1090
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 224 bits (570), Expect = 3e-56
Identities = 107/187 (57%), Positives = 134/187 (71%)
Frame = +1
Query: 166 QCSYPIHKYDSCANFSLKHVSFLATIAVETEPTKFSDAMQHPKWRGAMSLEIKALEKNGT 345
+ +P K SC F+ H +FLA + EPT +++AM WR AMS EI++L N T
Sbjct: 570 ETEFPYSKM-SCNRFTSSHKAFLAAVTAGMEPTTYNEAMVDKAWREAMSAEIESLRVNQT 628
Query: 346 WIMTDLPPGKHVLGSKWVYRIKRKTDGSIE*YKARLVILGNTQTEGIDYNETFAPMVKMG 525
+ + +LPPGK LG+KWVY+IK ++DG+IE YKARLV+LGN Q EG+DY+ETFAP+ KM
Sbjct: 629 FSIVNLPPGKRALGNKWVYKIKYRSDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKMS 688
Query: 526 TVRLLLAVAVTKNWKVH*MDIHNAFLHGDLEEEVYMCLPPSFHTTQSSKLCRLQKSLYDL 705
TVRL L VA ++W VH MD+HNAFLHGDL+EEVYM LP F SK+CRL KSLY L
Sbjct: 689 TVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGL 748
Query: 706 KQAPCCW 726
KQAP CW
Sbjct: 749 KQAPRCW 755
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 224 bits (570), Expect = 3e-56
Identities = 107/187 (57%), Positives = 134/187 (71%)
Frame = +1
Query: 166 QCSYPIHKYDSCANFSLKHVSFLATIAVETEPTKFSDAMQHPKWRGAMSLEIKALEKNGT 345
+ +P K SC F+ H +FLA + EPT +++AM WR AMS EI++L N T
Sbjct: 570 ETEFPYSKM-SCNRFTSSHKAFLAAVTAGMEPTTYNEAMVDKAWREAMSAEIESLRVNQT 628
Query: 346 WIMTDLPPGKHVLGSKWVYRIKRKTDGSIE*YKARLVILGNTQTEGIDYNETFAPMVKMG 525
+ + +LPPGK LG+KWVY+IK ++DG+IE YKARLV+LGN Q EG+DY+ETFAP+ KM
Sbjct: 629 FSIVNLPPGKRALGNKWVYKIKYRSDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKMS 688
Query: 526 TVRLLLAVAVTKNWKVH*MDIHNAFLHGDLEEEVYMCLPPSFHTTQSSKLCRLQKSLYDL 705
TVRL L VA ++W VH MD+HNAFLHGDL+EEVYM LP F SK+CRL KSLY L
Sbjct: 689 TVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGL 748
Query: 706 KQAPCCW 726
KQAP CW
Sbjct: 749 KQAPRCW 755
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 223 bits (567), Expect = 7e-56
Identities = 112/214 (52%), Positives = 143/214 (66%)
Frame = +1
Query: 85 VKLQDYVCHTVTCLKSHSRSSFHDHSGQCSYPIHKYDSCANFSLKHVSFLATIAVETEPT 264
VKL DYV T L S+ YP+ Y S + FS + +++ I EP
Sbjct: 929 VKLADYV---TTLLHQPFPSA-------TPYPLDNYISSSRFSDNYQAYILAITSGNEPR 978
Query: 265 KFSDAMQHPKWRGAMSLEIKALEKNGTWIMTDLPPGKHVLGSKWVYRIKRKTDGSIE*YK 444
+++AM W+GA+S EI +LE GTW + DLPPGK LG KWV+R+K K+DG++E +K
Sbjct: 979 NYNEAMLDDHWKGAVSHEIGSLENLGTWTVEDLPPGKKALGCKWVFRLKYKSDGTLERHK 1038
Query: 445 ARLVILGNTQTEGIDYNETFAPMVKMGTVRLLLAVAVTKNWKVH*MDIHNAFLHGDLEEE 624
ARLV+LGN QTEG+DY ETFAP+ KM TVR L V+ +W+VH MD+HNAFLHGDL+EE
Sbjct: 1039 ARLVVLGNNQTEGLDYTETFAPVAKMVTVRAFLQQVVSLDWEVHQMDVHNAFLHGDLDEE 1098
Query: 625 VYMCLPPSFHTTQSSKLCRLQKSLYDLKQAPCCW 726
VYM PP F T +K+CRL+KSLY LKQAP CW
Sbjct: 1099 VYMQFPPGFRTGDKTKVCRLRKSLYGLKQAPRCW 1132
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 222 bits (565), Expect = 1e-55
Identities = 117/222 (52%), Positives = 143/222 (64%), Gaps = 8/222 (3%)
Frame = +1
Query: 85 VKLQDYVCH--TVTCLKSH------SRSSFHDHSGQCSYPIHKYDSCANFSLKHVSFLAT 240
V+LQDYV + TV+ + H S+SS YP+ Y S FS H +FLA
Sbjct: 573 VRLQDYVLYNATVSPINPHALPDSSSQSSSMVQGTSSLYPLSDYVSDDCFSAGHKAFLAA 632
Query: 241 IAVETEPTKFSDAMQHPKWRGAMSLEIKALEKNGTWIMTDLPPGKHVLGSKWVYRIKRKT 420
I EP F +A++ W AM E+ ALE N TW + DLPPGK +GS+WVY+ K
Sbjct: 633 ITANDEPKHFKEAVRIKVWNDAMFKEVDALEINKTWDIVDLPPGKVAIGSQWVYKTKYNA 692
Query: 421 DGSIE*YKARLVILGNTQTEGIDYNETFAPMVKMGTVRLLLAVAVTKNWKVH*MDIHNAF 600
DGSIE YKARLV+ GN Q EG DYNETFAP+VKM TVR LL + W+V+ MD++NAF
Sbjct: 693 DGSIERYKARLVVQGNKQVEGEDYNETFAPVVKMTTVRTLLRLVAANQWEVYQMDVNNAF 752
Query: 601 LHGDLEEEVYMCLPPSFHTTQSSKLCRLQKSLYDLKQAPCCW 726
LHGDL+EEVYM LPP F + K+CRL+KSLY LKQAP CW
Sbjct: 753 LHGDLDEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCW 794
>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
Length = 1316
Score = 219 bits (559), Expect = 6e-55
Identities = 112/214 (52%), Positives = 140/214 (65%), Gaps = 2/214 (0%)
Frame = +1
Query: 91 LQDYVCHTVTCLKS--HSRSSFHDHSGQCSYPIHKYDSCANFSLKHVSFLATIAVETEPT 264
LQDY+C++ L + SS YPI Y + FS+ H +FLA I +E EP
Sbjct: 749 LQDYICYSARSLSTLCSKASSIQKVPSGKPYPIANYVTYTKFSVGHRAFLAXINIEKEPR 808
Query: 265 KFSDAMQHPKWRGAMSLEIKALEKNGTWIMTDLPPGKHVLGSKWVYRIKRKTDGSIE*YK 444
+ +A+ +WR AM+ EI+ALE N TW + DLPP K +G KW+Y+IK DGSIE YK
Sbjct: 809 TYKEAVXDNRWREAMAKEIEALETNQTWKVVDLPPEKKAIGCKWIYKIKYNADGSIERYK 868
Query: 445 ARLVILGNTQTEGIDYNETFAPMVKMGTVRLLLAVAVTKNWKVH*MDIHNAFLHGDLEEE 624
ARLV G TQ EGIDY E F+P+ KM +VR LAV V K W++H MD++NAFLHGDLEEE
Sbjct: 869 ARLVAQGFTQIEGIDYQEXFSPVAKMTSVRCFLAVXVAKRWELHQMDVNNAFLHGDLEEE 928
Query: 625 VYMCLPPSFHTTQSSKLCRLQKSLYDLKQAPCCW 726
VYM LP F T +K+C+LQKSLY LKQA W
Sbjct: 929 VYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 962
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 216 bits (550), Expect = 6e-54
Identities = 111/222 (50%), Positives = 137/222 (61%), Gaps = 9/222 (4%)
Frame = +1
Query: 88 KLQDYVCHTVTC-------LKSHSRSSFHDHSGQCSYPIHKY--DSCANFSLKHVSFLAT 240
+L+DY+ + +C L + S G YP+ Y D C FS H FLA
Sbjct: 918 RLKDYILYNASCTPNTPHVLSPSTSQSSSSIQGNSQYPLTDYIFDEC--FSAGHKVFLAA 975
Query: 241 IAVETEPTKFSDAMQHPKWRGAMSLEIKALEKNGTWIMTDLPPGKHVLGSKWVYRIKRKT 420
I EP F +A++ W AM E+ ALE N TW + DLP GK +GS+WVY+ K
Sbjct: 976 ITANDEPKHFKEAVKVKVWNDAMYKEVDALEVNKTWDIVDLPTGKVAIGSQWVYKTKFNA 1035
Query: 421 DGSIE*YKARLVILGNTQTEGIDYNETFAPMVKMGTVRLLLAVAVTKNWKVH*MDIHNAF 600
DG++E YKARLV+ GN Q EG DY ETFAP+VKM TVR LL + W+V+ MD+HNAF
Sbjct: 1036 DGTVERYKARLVVQGNNQIEGEDYTETFAPVVKMTTVRTLLRLVAANQWEVYQMDVHNAF 1095
Query: 601 LHGDLEEEVYMCLPPSFHTTQSSKLCRLQKSLYDLKQAPCCW 726
LHGDLEEEVYM LPP F + K+CRL+KSLY LKQAP CW
Sbjct: 1096 LHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCW 1137
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 216 bits (549), Expect = 8e-54
Identities = 109/220 (49%), Positives = 135/220 (61%), Gaps = 7/220 (3%)
Frame = +1
Query: 88 KLQDYVCHTVTC-------LKSHSRSSFHDHSGQCSYPIHKYDSCANFSLKHVSFLATIA 246
+L+DY+ + +C L + S G YP+ Y S FS H FLA I
Sbjct: 918 RLKDYILYNASCTPNTPHVLSPSTSQSSSSIQGNLQYPLTDYISDECFSAGHKVFLAAIT 977
Query: 247 VETEPTKFSDAMQHPKWRGAMSLEIKALEKNGTWIMTDLPPGKHVLGSKWVYRIKRKTDG 426
EP F + ++ W AM E+ ALE N TW + DLP GK +GS+WVY+ K DG
Sbjct: 978 ANDEPKHFKEDVKVKVWNDAMYKEVDALEVNKTWDIVDLPTGKVAIGSQWVYKTKFNADG 1037
Query: 427 SIE*YKARLVILGNTQTEGIDYNETFAPMVKMGTVRLLLAVAVTKNWKVH*MDIHNAFLH 606
++E YKARLV+ GN Q EG DY ETFAP+VKM TVR LL + W+V+ MD+HNAFLH
Sbjct: 1038 TVERYKARLVVQGNNQIEGEDYTETFAPVVKMTTVRTLLRLVAANQWEVYQMDVHNAFLH 1097
Query: 607 GDLEEEVYMCLPPSFHTTQSSKLCRLQKSLYDLKQAPCCW 726
GDLEEEVYM LPP F + K+CRL+KSLY LKQAP CW
Sbjct: 1098 GDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCW 1137
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 215 bits (548), Expect = 1e-53
Identities = 111/219 (50%), Positives = 138/219 (63%), Gaps = 6/219 (2%)
Frame = +1
Query: 88 KLQDYVCHTVTCLKSHSRSSFHDHS------GQCSYPIHKYDSCANFSLKHVSFLATIAV 249
KL DYV + S + D S G+ +P+ Y S A FS H ++LA I
Sbjct: 929 KLNDYVLYNAMYTPSSIHALPADPSQSSTVPGKSLFPLTDYVSDAAFSSSHRAYLAAITD 988
Query: 250 ETEPTKFSDAMQHPKWRGAMSLEIKALEKNGTWIMTDLPPGKHVLGSKWVYRIKRKTDGS 429
EP F +A+Q W AM E+ ALE N TW + DLPPGK +GS+WV++ K +DG+
Sbjct: 989 NVEPKHFKEAVQIKVWNDAMFTEVDALEINKTWDIVDLPPGKVAIGSQWVFKTKYNSDGT 1048
Query: 430 IE*YKARLVILGNTQTEGIDYNETFAPMVKMGTVRLLLAVAVTKNWKVH*MDIHNAFLHG 609
+E YKARLV+ GN Q EG DY ETFAP+V+M TVR LL W+V+ MD+HNAFLHG
Sbjct: 1049 VERYKARLVVQGNKQVEGEDYKETFAPVVRMTTVRTLLRNVAANQWEVYQMDVHNAFLHG 1108
Query: 610 DLEEEVYMCLPPSFHTTQSSKLCRLQKSLYDLKQAPCCW 726
DLEEEVYM LPP F + K+CRL+KSLY LKQAP CW
Sbjct: 1109 DLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCW 1147
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 214 bits (546), Expect = 2e-53
Identities = 100/190 (52%), Positives = 134/190 (70%)
Frame = +1
Query: 157 HSGQCSYPIHKYDSCANFSLKHVSFLATIAVETEPTKFSDAMQHPKWRGAMSLEIKALEK 336
H YP+ Y S + FS + +++ I++ EP + +A+ WR A+S EI +LE
Sbjct: 905 HPSVTPYPLDNYVSSSQFSAAYQAYVFAISLGIEPKSYKEAILDENWRCAVSDEIVSLEN 964
Query: 337 NGTWIMTDLPPGKHVLGSKWVYRIKRKTDGSIE*YKARLVILGNTQTEGIDYNETFAPMV 516
GTW + DLPPGK LG KWV+R+K K+DG++E +KARLV+LGN QTEGIDY+ETFAP+
Sbjct: 965 LGTWTVEDLPPGKKALGCKWVFRLKYKSDGTLERHKARLVVLGNKQTEGIDYSETFAPVA 1024
Query: 517 KMGTVRLLLAVAVTKNWKVH*MDIHNAFLHGDLEEEVYMCLPPSFHTTQSSKLCRLQKSL 696
KM TVR L + +W+VH MD+HNAFLHGDL+EEVY+ PP F + + K+CRL+K+L
Sbjct: 1025 KMVTVRAFLQQVASLDWEVHQMDVHNAFLHGDLDEEVYIKFPPGFGSDDNRKVCRLRKAL 1084
Query: 697 YDLKQAPCCW 726
Y LKQAP CW
Sbjct: 1085 YGLKQAPRCW 1094
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 211 bits (536), Expect = 3e-52
Identities = 101/184 (54%), Positives = 129/184 (70%)
Frame = +1
Query: 175 YPIHKYDSCANFSLKHVSFLATIAVETEPTKFSDAMQHPKWRGAMSLEIKALEKNGTWIM 354
YP+ Y +C FS +H FLAT+ EP+ +++ ++ WR AM EI+ALE N TWI+
Sbjct: 665 YPLAHYVNCDKFSAQHRFFLATVTTGCEPSTYAEVIKDECWREAMRKEIQALEDNETWIV 724
Query: 355 TDLPPGKHVLGSKWVYRIKRKTDGSIE*YKARLVILGNTQTEGIDYNETFAPMVKMGTVR 534
+LP K +GSKWVY+IK +DGSIE K RLVILGN + EGIDYNETFAP KM TV+
Sbjct: 725 ENLPLEKKAIGSKWVYKIKYNSDGSIERCKTRLVILGNKKVEGIDYNETFAPTAKMVTVQ 784
Query: 535 LLLAVAVTKNWKVH*MDIHNAFLHGDLEEEVYMCLPPSFHTTQSSKLCRLQKSLYDLKQA 714
LAV K W++H MD+HNAFLHG+L+EEVYM + P F + K+C L+KSLY L+QA
Sbjct: 785 TFLAVVAMKGWELHQMDVHNAFLHGELDEEVYMQMSPGFASPTPGKVCGLRKSLYGLQQA 844
Query: 715 PCCW 726
P CW
Sbjct: 845 PKCW 848
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 204 bits (519), Expect = 2e-50
Identities = 96/164 (58%), Positives = 121/164 (73%)
Frame = +1
Query: 235 ATIAVETEPTKFSDAMQHPKWRGAMSLEIKALEKNGTWIMTDLPPGKHVLGSKWVYRIKR 414
ATI +P F +AM+ W+ +M EI+ALE+NGTW + LP GK LGS+WVYR K
Sbjct: 944 ATIISSNDPKSFKEAMKDVGWQKSMHEEIRALEENGTWTLEPLPKGKRALGSQWVYRTKY 1003
Query: 415 KTDGSIE*YKARLVILGNTQTEGIDYNETFAPMVKMGTVRLLLAVAVTKNWKVH*MDIHN 594
++G IE K+RLV+LGN Q GIDY+ETF+P+ KM TVR LA+A +KNW++H MD+HN
Sbjct: 1004 FSNGDIERLKSRLVVLGNHQEAGIDYHETFSPVAKMTTVRTFLAIAASKNWELHQMDVHN 1063
Query: 595 AFLHGDLEEEVYMCLPPSFHTTQSSKLCRLQKSLYDLKQAPCCW 726
AFLHGDLEEEVYM LPP F + + +CRL+KSLY LKQAP CW
Sbjct: 1064 AFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCW 1107