BLASTX nr result
ID: Rauwolfia21_contig00019539
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00019539
(432 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 83 2e-31
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 77 1e-28
ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulg... 77 8e-28
ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668... 74 4e-27
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 73 3e-25
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas... 75 6e-24
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 68 5e-23
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 68 5e-23
gb|AAD22330.1| putative non-LTR retroelement reverse transcripta... 68 3e-22
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 68 6e-22
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 66 1e-21
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 67 2e-21
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 72 4e-21
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 63 1e-20
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 64 6e-20
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 66 6e-20
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 62 6e-20
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 64 8e-20
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 62 2e-19
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 65 3e-19
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 83.2 bits (204), Expect(2) = 2e-31
Identities = 39/64 (60%), Positives = 46/64 (71%)
Frame = +2
Query: 236 QREKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLVLF 415
Q KGLRQGDP+S LF LC+EYLSR + DF FHPKC+ L +THL FADDL++F
Sbjct: 636 QARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMF 695
Query: 416 SRAD 427
RAD
Sbjct: 696 CRAD 699
Score = 78.6 bits (192), Expect(2) = 2e-31
Identities = 33/71 (46%), Positives = 49/71 (69%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
+N+ +A E+++ Y K SPRC++KVD+RK+YDSV W FL +L+ F FPSR + WI E
Sbjct: 558 DNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMEC 617
Query: 183 GGTTLFSISLN 215
T +S+ +N
Sbjct: 618 VSTVSYSVLVN 628
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 77.0 bits (188), Expect(2) = 1e-28
Identities = 36/62 (58%), Positives = 46/62 (74%)
Frame = +2
Query: 242 EKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLVLFSR 421
+KGLRQGDP+S LF L +EYLSR + +F FHPKC+ + LTHL FADDL++F+R
Sbjct: 641 QKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFAR 700
Query: 422 AD 427
AD
Sbjct: 701 AD 702
Score = 75.1 bits (183), Expect(2) = 1e-28
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
+N+ +A E+++ YN + SPRC+IKVD+RK+YDSV W+FL +L FPS I WI
Sbjct: 561 DNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMAC 620
Query: 183 GGTTLFSISLN 215
T +SI LN
Sbjct: 621 VKTVSYSILLN 631
>ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulgaris subsp. maritima]
gi|346683183|ref|YP_004842114.1| hypothetical protein
BemaM_p069 [Beta macrocarpa]
gi|319439824|emb|CBX33299.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500101|emb|CBX24919.1|
hypothetical protein [Beta macrocarpa]
Length = 238
Score = 76.6 bits (187), Expect(2) = 8e-28
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
+N+ +A E++K Y+ K SPRC+IKVDLRK+YDS+ W FL +L FPS+ I WI E
Sbjct: 24 DNILLATELIKGYSQKAVSPRCMIKVDLRKAYDSIEWSFLQCMLSELGFPSQFITWIMEC 83
Query: 183 GGTTLFSISLN 215
T +SI LN
Sbjct: 84 VTTVSYSILLN 94
Score = 72.8 bits (177), Expect(2) = 8e-28
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +2
Query: 242 EKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLVLFSR 421
+KG+RQGDP+S LF + +EYLSR + T +F +HP+C+ L +TH+ FA DL+LFSR
Sbjct: 104 KKGVRQGDPMSPFLFAIGMEYLSRCLLELTLNPNFNYHPRCEKLAITHMMFASDLLLFSR 163
Query: 422 AD 427
AD
Sbjct: 164 AD 165
>ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max]
Length = 477
Score = 74.3 bits (181), Expect(2) = 4e-27
Identities = 34/62 (54%), Positives = 44/62 (70%)
Frame = +2
Query: 242 EKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLVLFSR 421
+ GLRQGDP+ LFVLCLEY S ++ ++FKFHP C + L+HLAFADD++L SR
Sbjct: 83 QHGLRQGDPLFPYLFVLCLEYFSCDLQSLKDNINFKFHPTCDVVQLSHLAFADDIMLLSR 142
Query: 422 AD 427
D
Sbjct: 143 GD 144
Score = 72.8 bits (177), Expect(2) = 4e-27
Identities = 33/70 (47%), Positives = 48/70 (68%)
Frame = +3
Query: 6 NVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEYG 185
N+F+ QE+L+ Y K SPRCL+K+DL K+Y+S+SW FL +L + FP++ WI E
Sbjct: 4 NIFLIQELLRKYARKRISPRCLLKIDLHKAYNSISWEFLDWMLKSMGFPTQFCSWIMECI 63
Query: 186 GTTLFSISLN 215
TT FS+ +N
Sbjct: 64 TTTSFSVVVN 73
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 73.2 bits (178), Expect(2) = 3e-25
Identities = 35/61 (57%), Positives = 43/61 (70%)
Frame = +2
Query: 245 KGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLVLFSRA 424
KGLRQGDP+S LF + +EYLSR ++ FK+HPK L +THL FADDL+LFSR
Sbjct: 447 KGLRQGDPMSPFLFAIAMEYLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFSRG 506
Query: 425 D 427
D
Sbjct: 507 D 507
Score = 67.8 bits (164), Expect(2) = 3e-25
Identities = 27/71 (38%), Positives = 46/71 (64%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
+N+ +A E++K+Y K SPRC++K+DL K+YDSV W FL +++ FP +W+ +
Sbjct: 366 DNIILAHELVKAYTRKNVSPRCMLKIDLHKAYDSVEWPFLEQVMEGLGFPDLFTKWVMKC 425
Query: 183 GGTTLFSISLN 215
T ++I +N
Sbjct: 426 VKTVNYTIVVN 436
>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 402
Score = 75.1 bits (183), Expect(2) = 6e-24
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = +2
Query: 242 EKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLVLFSR 421
+KGLRQGDPIS LFV+C+EYL+ + F+FHP+CK L L H+ F DDL+LFSR
Sbjct: 321 KKGLRQGDPISPYLFVICMEYLNICLIQLRKNAAFRFHPRCKRLNLIHVCFVDDLLLFSR 380
Query: 422 AD 427
D
Sbjct: 381 GD 382
Score = 61.2 bits (147), Expect(2) = 6e-24
Identities = 23/71 (32%), Positives = 46/71 (64%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
+N+ ++ E++KSY+ K SPRC++K+DL+K+Y+SV W F+ ++ F + + W+
Sbjct: 241 DNIILSHELVKSYSRKGISPRCMVKIDLQKAYNSVEWPFIKHLMLELGFSYKFVNWVMGC 300
Query: 183 GGTTLFSISLN 215
T ++ ++N
Sbjct: 301 LTTASYTFNIN 311
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 67.8 bits (164), Expect(2) = 5e-23
Identities = 30/71 (42%), Positives = 43/71 (60%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
ENV +A E++K Y+ SPRC +K+D+ K++DSV W FL+ L FP + WIK
Sbjct: 715 ENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALKFPEKFRHWIKLC 774
Query: 183 GGTTLFSISLN 215
T FS+ +N
Sbjct: 775 ISTATFSVQVN 785
Score = 65.5 bits (158), Expect(2) = 5e-23
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +2
Query: 230 FLQREKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLV 409
F ++GLRQG +S LFV+C+ LS I +A + +HPKCK L LTHL FADDL+
Sbjct: 791 FFGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLM 850
Query: 410 LF 415
+F
Sbjct: 851 VF 852
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 67.8 bits (164), Expect(2) = 5e-23
Identities = 31/74 (41%), Positives = 43/74 (58%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
ENV +A E++K Y+ SPRC +K+D+ K++DSV W FL+ L FP WIK
Sbjct: 146 ENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLC 205
Query: 183 GGTTLFSISLNDML 224
T FS+ +N L
Sbjct: 206 ISTATFSVQVNGEL 219
Score = 65.5 bits (158), Expect(2) = 5e-23
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +2
Query: 230 FLQREKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLV 409
F ++GLRQG +S LFV+C+ LS I +A + +HPKCK L LTHL FADDL+
Sbjct: 222 FFGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLM 281
Query: 410 LF 415
+F
Sbjct: 282 VF 283
>gb|AAD22330.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 631
Score = 67.8 bits (164), Expect(2) = 3e-22
Identities = 31/74 (41%), Positives = 44/74 (59%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
ENV +A E++K Y+ SPRC +K+D+ K++DSV W FL+ L FP + WIK
Sbjct: 143 ENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPEKIRHWIKLC 202
Query: 183 GGTTLFSISLNDML 224
T FS+ +N L
Sbjct: 203 ISTATFSVQVNGEL 216
Score = 62.8 bits (151), Expect(2) = 3e-22
Identities = 30/62 (48%), Positives = 39/62 (62%)
Frame = +2
Query: 230 FLQREKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLV 409
F ++GLRQG +S LFV+C+ LS I A + +HPKCK L LTHL F DDL+
Sbjct: 219 FFGNKRGLRQGCALSPYLFVICMNVLSHMIDEAAVRRNIGYHPKCKKLSLTHLCFVDDLM 278
Query: 410 LF 415
+F
Sbjct: 279 VF 280
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 67.8 bits (164), Expect(2) = 6e-22
Identities = 30/63 (47%), Positives = 43/63 (68%)
Frame = +2
Query: 230 FLQREKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLV 409
+ Q +GLRQG +S LFV+C++ LS+ + A F +HPKCK + LTHL+FADDL+
Sbjct: 649 YFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLM 708
Query: 410 LFS 418
+ S
Sbjct: 709 VLS 711
Score = 62.0 bits (149), Expect(2) = 6e-22
Identities = 30/74 (40%), Positives = 42/74 (56%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
EN+ +A E++K Y+ S RC IK+D+ K++DSV W FLI + FP I WI
Sbjct: 573 ENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINIC 632
Query: 183 GGTTLFSISLNDML 224
T FS+ +N L
Sbjct: 633 ITTASFSVQVNGEL 646
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 66.2 bits (160), Expect(2) = 1e-21
Identities = 30/74 (40%), Positives = 46/74 (62%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
ENV +A E++ YN TS R ++K+DLRK++D+VSW F+ +I+ P + W+K
Sbjct: 20 ENVLLATELVHEYNRPNTSKRAMLKIDLRKAFDTVSWEFITKIMQALNLPRTFVTWVKVC 79
Query: 183 GGTTLFSISLNDML 224
T FS+S+N L
Sbjct: 80 METPKFSVSINGEL 93
Score = 62.8 bits (151), Expect(2) = 1e-21
Identities = 27/66 (40%), Positives = 42/66 (63%)
Frame = +2
Query: 230 FLQREKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLV 409
+ + +GLRQGDP+S LF++ +E LSR + HPKC + +THLAFADD++
Sbjct: 96 YFKGRRGLRQGDPLSPYLFIMSMEVLSRMLDRCAAESRLSLHPKCHSPVITHLAFADDIM 155
Query: 410 LFSRAD 427
+F+ +
Sbjct: 156 IFTSGE 161
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 66.6 bits (161), Expect(2) = 2e-21
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
ENV +A E++K Y+ + +PRC +K+D+ K++DSV W FL+ L FP WIK
Sbjct: 870 ENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLC 929
Query: 183 GGTTLFSISLNDML 224
T FS+ +N L
Sbjct: 930 ISTATFSVQVNGEL 943
Score = 61.2 bits (147), Expect(2) = 2e-21
Identities = 29/62 (46%), Positives = 39/62 (62%)
Frame = +2
Query: 230 FLQREKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLV 409
F +GLRQG +S LFV+C+ LS I A + +HPKC+ + LTHL FADDL+
Sbjct: 946 FFGSSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLM 1005
Query: 410 LF 415
+F
Sbjct: 1006 VF 1007
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 71.6 bits (174), Expect(2) = 4e-21
Identities = 35/78 (44%), Positives = 52/78 (66%)
Frame = +2
Query: 194 FIFNLTK*HALRFLQREKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL 373
++FN+ R L+ +G+RQGDPIS LF+L +EYL+R + +F +H KC+ +
Sbjct: 451 YVFNING-RFTRRLEARRGIRQGDPISPLLFILVMEYLNRILSQLDKIPNFNYHSKCEKM 509
Query: 374 *LTHLAFADDLVLFSRAD 427
+T+L FADDL+LFSR D
Sbjct: 510 KITNLCFADDLLLFSRGD 527
Score = 55.5 bits (132), Expect(2) = 4e-21
Identities = 22/57 (38%), Positives = 39/57 (68%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWI 173
++V +A E+L+ Y K +P+C++++D++K+YD+V W L IL FP + I+WI
Sbjct: 386 DHVMLAFELLRGYERKHGTPKCMLQIDIQKAYDTVHWDALEHILRELGFPDQFIKWI 442
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 63.2 bits (152), Expect(2) = 1e-20
Identities = 30/74 (40%), Positives = 42/74 (56%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
ENV +A E++K Y+ S RC +K+D+ K++DS+ W FL +L FP I WI
Sbjct: 294 ENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLC 353
Query: 183 GGTTLFSISLNDML 224
T FSI +N L
Sbjct: 354 MSTASFSIQVNGEL 367
Score = 62.0 bits (149), Expect(2) = 1e-20
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +2
Query: 230 FLQREKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLV 409
+ + +GLRQG +S LFV+ ++ LSR + A +F +HP+CK L LTHL FADDL+
Sbjct: 370 YFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDLM 429
Query: 410 LFS 418
+ +
Sbjct: 430 ILT 432
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 64.3 bits (155), Expect(2) = 6e-20
Identities = 31/74 (41%), Positives = 42/74 (56%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
ENV +A EI+K Y+ S RC +K+D+ K++DSV W FLI +L FP WI
Sbjct: 461 ENVLLATEIVKDYHKDSVSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLC 520
Query: 183 GGTTLFSISLNDML 224
T FS+ +N L
Sbjct: 521 ITTASFSVQVNGEL 534
Score = 58.5 bits (140), Expect(2) = 6e-20
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = +2
Query: 251 LRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLVLFS 418
LRQG +S LFV+ ++ LS+ + A F +HPKC+A+ LTHL+FADDL++ S
Sbjct: 544 LRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLSFADDLMILS 599
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 66.2 bits (160), Expect(2) = 6e-20
Identities = 31/63 (49%), Positives = 44/63 (69%)
Frame = +2
Query: 230 FLQREKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLV 409
+ Q ++GLRQG +S LFV+C++ LS+ + A F FHPKC+ L LTHL+FADDL+
Sbjct: 296 YFQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLM 355
Query: 410 LFS 418
+ S
Sbjct: 356 VLS 358
Score = 56.6 bits (135), Expect(2) = 6e-20
Identities = 28/71 (39%), Positives = 39/71 (54%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
EN+ +A E++K Y+ S RC IK+D+ K++DSV W FL L F I WI
Sbjct: 220 ENLLLATELVKDYHKDSISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLC 279
Query: 183 GGTTLFSISLN 215
T FS+ +N
Sbjct: 280 ITTASFSVQVN 290
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 61.6 bits (148), Expect(2) = 6e-20
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +2
Query: 230 FLQREKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLV 409
F Q ++GLRQG +S LFV+ ++ LS+ + A + F +H +CK L LTHL+FADDL+
Sbjct: 176 FFQSKRGLRQGCSLSPYLFVMSMDVLSKLLDQAASAKKFGYHSRCKELSLTHLSFADDLM 235
Query: 410 LFS 418
+ S
Sbjct: 236 VLS 238
Score = 61.2 bits (147), Expect(2) = 6e-20
Identities = 28/74 (37%), Positives = 44/74 (59%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
EN+ +A E++K Y+ + S RC IK+D+ K+++SV W F+ IL + FP + WI
Sbjct: 100 ENLLLATELVKDYHKESVSSRCAIKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLC 159
Query: 183 GGTTLFSISLNDML 224
T FS+ +N L
Sbjct: 160 ISTASFSVQVNGEL 173
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 64.3 bits (155), Expect(2) = 8e-20
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
EN+ +A E++K Y+ SPRC +K+DL K++DSV W FL+ L P + I WI
Sbjct: 839 ENLLLASELVKDYHKDGLSPRCAMKIDLSKAFDSVQWPFLLNTLAALDIPEKFIHWINLC 898
Query: 183 GGTTLFSISLNDM 221
T FS+ +N +
Sbjct: 899 ISTASFSVQVNGL 911
Score = 58.2 bits (139), Expect(2) = 8e-20
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +2
Query: 230 FLQREKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLV 409
F + GLRQG +S LFV+C+ LS + F +HP+C+ + LTHL FADD++
Sbjct: 904 FSVQVNGLRQGCSLSPYLFVICMNVLSAMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIM 963
Query: 410 LFS 418
+FS
Sbjct: 964 VFS 966
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 61.6 bits (148), Expect(2) = 2e-19
Identities = 31/74 (41%), Positives = 47/74 (63%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
ENV +A E+++ + S R ++KVDLRK++DSV W F+IE L P R + WIK+
Sbjct: 566 ENVLLATELVQGFGQANISSRGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQC 625
Query: 183 GGTTLFSISLNDML 224
+T FSI+++ L
Sbjct: 626 ITSTSFSINVSGSL 639
Score = 59.7 bits (143), Expect(2) = 2e-19
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +2
Query: 230 FLQREKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLV 409
+ + KGLRQGDP+S SLFV+ +E LSR + + +HPK + ++ LAFADDL+
Sbjct: 642 YFKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLM 701
Query: 410 LF 415
+F
Sbjct: 702 IF 703
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 65.1 bits (157), Expect(2) = 3e-19
Identities = 29/71 (40%), Positives = 44/71 (61%)
Frame = +3
Query: 3 ENVFIAQEILKSYNHK*TSPRCLIKVDLRKSYDSVSWMFLIEILHNFVFPSRSIEWIKEY 182
ENV +A +++ YN SPR ++KVDL+K++DSV W F+I L P + I WI +
Sbjct: 567 ENVLLATDLVHGYNWSNISPRGMLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQC 626
Query: 183 GGTTLFSISLN 215
T F++S+N
Sbjct: 627 ISTPTFTVSIN 637
Score = 55.5 bits (132), Expect(2) = 3e-19
Identities = 27/62 (43%), Positives = 37/62 (59%)
Frame = +2
Query: 230 FLQREKGLRQGDPISSSLFVLCLEYLSRKIRLATTGMDFKFHPKCKAL*LTHLAFADDLV 409
F + KGLRQGDP+S LFVL +E S + +HPK L ++HL FADD++
Sbjct: 643 FFKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVM 702
Query: 410 LF 415
+F
Sbjct: 703 IF 704