BLASTX nr result
ID: Rauwolfia21_contig00019528
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00019528
(1743 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY14977.1| DNA-directed RNA polymerases, putative isoform 1 ... 71 1e-09
ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycin... 70 3e-09
gb|EXB58395.1| putative DNA-directed RNA polymerase I subunit RP... 66 4e-08
ref|XP_006435147.1| hypothetical protein CICLE_v10002352mg [Citr... 64 3e-07
ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I sub... 63 5e-07
gb|AGV54225.1| DNA-directed RNA polymerase I subunit rpa43-like ... 61 1e-06
ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I sub... 61 1e-06
ref|XP_006473630.1| PREDICTED: DNA-directed RNA polymerase I sub... 61 2e-06
gb|AFK42289.1| unknown [Lotus japonicus] 60 2e-06
ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264... 60 2e-06
>gb|EOY14977.1| DNA-directed RNA polymerases, putative isoform 1 [Theobroma cacao]
Length = 243
Score = 71.2 bits (173), Expect = 1e-09
Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = -1
Query: 669 RRIIK*LNMVTYSC-SFDEEILHISGSLVPAHTGCVRWLERNLEEWSKFDSSAIKKRIAN 493
R +IK M+ + SFDEEILHI GSL+PAHTG + WL+ NLEE S+FD SA K R
Sbjct: 154 RHVIKVGTMIRFLVKSFDEEILHIIGSLMPAHTGSICWLDWNLEEISEFDRSATKSR--- 210
Query: 492 EGTRDIPENVNIMMDETVPLNANDPSKKSKRRK 394
R+ E+ + T PL+ N+ KKSK+ +
Sbjct: 211 --GREWQEDKT--FEGTTPLSYNNHIKKSKKHR 239
>ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycine max]
gi|571541492|ref|XP_006601777.1| PREDICTED:
uncharacterized protein LOC100527229 isoform X1 [Glycine
max] gi|571541496|ref|XP_006601778.1| PREDICTED:
uncharacterized protein LOC100527229 isoform X2 [Glycine
max] gi|255631830|gb|ACU16282.1| unknown [Glycine max]
Length = 232
Score = 70.1 bits (170), Expect = 3e-09
Identities = 44/101 (43%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Frame = -1
Query: 669 RRIIK*LNMVTYSC-SFDEEILHISGSLVPAHTGCVRWLERNLEEWSKFDSSAIKKRIAN 493
R +IK M+ + SFDEEILH+ GSLVP HTG + WL++NLE S D S K+RI
Sbjct: 138 RHVIKVGTMIRFLVKSFDEEILHVYGSLVPDHTGSIYWLDKNLEVDSHSDRSEKKRRI-- 195
Query: 492 EGTRDIPENVNIMMD----ETVPLNANDPSKKSKRRKKGNE 382
+PE + + D E LN SKKSK++K E
Sbjct: 196 -----VPERIMLEQDAVDGELSTLNIGQKSKKSKKQKHQEE 231
>gb|EXB58395.1| putative DNA-directed RNA polymerase I subunit RPA43 [Morus
notabilis]
Length = 234
Score = 66.2 bits (160), Expect = 4e-08
Identities = 35/79 (44%), Positives = 50/79 (63%)
Frame = -1
Query: 627 SFDEEILHISGSLVPAHTGCVRWLERNLEEWSKFDSSAIKKRIANEGTRDIPENVNIMMD 448
S DEEILHISGSL+PAHTGC+RWL ++L++ + KKR NE I ++ +
Sbjct: 153 SLDEEILHISGSLIPAHTGCIRWLAKHLDD-DTITGRSKKKRRENE-EESILQDHGTVSG 210
Query: 447 ETVPLNANDPSKKSKRRKK 391
E + N++ KKSK+ K+
Sbjct: 211 EALSFNSDHRIKKSKKEKR 229
>ref|XP_006435147.1| hypothetical protein CICLE_v10002352mg [Citrus clementina]
gi|557537269|gb|ESR48387.1| hypothetical protein
CICLE_v10002352mg [Citrus clementina]
Length = 233
Score = 63.5 bits (153), Expect = 3e-07
Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Frame = -1
Query: 669 RRIIK*LNMVTYSC-SFDEEILHISGSLVPAHTGCVRWLERNLEEWSKFDSSAIKKRIAN 493
R +IK M+ + SFDEEILHISGSL PAHTG +RWL++ + DSS K+R
Sbjct: 138 RHVIKVGTMIRFLVKSFDEEILHISGSLKPAHTGSIRWLDKKSKNVCLADSSTTKRREV- 196
Query: 492 EGTRDIPENVNIMMDETVPLNANDPS-KKSKRRK 394
EG ++ +N + V +ND KKSK+R+
Sbjct: 197 EGKSEMQDNETV--GAAVSSVSNDHQIKKSKKRR 228
>ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like isoform
X1 [Glycine max] gi|571479213|ref|XP_006587794.1|
PREDICTED: DNA-directed RNA polymerase I subunit
rpa43-like isoform X2 [Glycine max]
gi|571479215|ref|XP_006587795.1| PREDICTED: DNA-directed
RNA polymerase I subunit rpa43-like isoform X3 [Glycine
max]
Length = 232
Score = 62.8 bits (151), Expect = 5e-07
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Frame = -1
Query: 627 SFDEEILHISGSLVPAHTGCVRWLERNLEEWSKFDSSAIKKRIANEGTRDIPENVNIMMD 448
SFDEEILH+ GSLVP HTG + WL++NLE S S K+RI +PE + + D
Sbjct: 153 SFDEEILHVYGSLVPDHTGSIYWLDKNLEADSHVYRSKKKRRI-------VPERIMLEQD 205
Query: 447 ----ETVPLNANDPSKKSKRRKKGNE 382
E L+ SKKSK++K E
Sbjct: 206 AVDGELSTLDIVQKSKKSKKQKHQEE 231
>gb|AGV54225.1| DNA-directed RNA polymerase I subunit rpa43-like protein [Phaseolus
vulgaris] gi|561012820|gb|ESW11681.1| hypothetical
protein PHAVU_008G050600g [Phaseolus vulgaris]
Length = 232
Score = 61.2 bits (147), Expect = 1e-06
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = -1
Query: 690 HSKNVSTRRIIK*LNMVTYSC-SFDEEILHISGSLVPAHTGCVRWLERNLEEWSKFDSSA 514
++ + R +IK M+ + SFDEEILHI GSL+P HTG + WL++NLE S D S
Sbjct: 131 YASRSNKRHVIKVGTMIRFLVKSFDEEILHICGSLIPDHTGSIYWLDKNLEVVSHADRSE 190
Query: 513 IKKRIANE 490
KKRI E
Sbjct: 191 KKKRIEPE 198
>ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like
[Cucumis sativus] gi|449476884|ref|XP_004154864.1|
PREDICTED: DNA-directed RNA polymerase I subunit
rpa43-like [Cucumis sativus]
Length = 231
Score = 61.2 bits (147), Expect = 1e-06
Identities = 37/78 (47%), Positives = 50/78 (64%)
Frame = -1
Query: 627 SFDEEILHISGSLVPAHTGCVRWLERNLEEWSKFDSSAIKKRIANEGTRDIPENVNIMMD 448
SFDEEILHISGSLVP+HTG + WLE+N E S S +K NEG + ++V ++
Sbjct: 153 SFDEEILHISGSLVPSHTGSIHWLEKNSVEGSVTMSK--RKMRENEGGVTLQDSVGTDVN 210
Query: 447 ETVPLNANDPSKKSKRRK 394
+ LN ND K+K++K
Sbjct: 211 AVI-LN-NDHQPKTKKQK 226
>ref|XP_006473630.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like isoform
X1 [Citrus sinensis]
Length = 233
Score = 60.8 bits (146), Expect = 2e-06
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -1
Query: 627 SFDEEILHISGSLVPAHTGCVRWLERNLEEWSKFDSSAIKKRIANEGTRDIPENVNIMMD 448
SFDEEILHISGSL+PA TG +RWL++ + DSS K+R EG ++ +N +
Sbjct: 153 SFDEEILHISGSLIPARTGSIRWLDKKSKNVCLADSSTTKRREV-EGKSEMQDNETV--G 209
Query: 447 ETVPLNANDPS-KKSKRRK 394
V +ND KKSK+R+
Sbjct: 210 AAVSSVSNDHQIKKSKKRR 228
>gb|AFK42289.1| unknown [Lotus japonicus]
Length = 232
Score = 60.5 bits (145), Expect = 2e-06
Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = -1
Query: 678 VSTRRIIK*LNMVTYSC-SFDEEILHISGSLVPAHTGCVRWLERNLEEWSKFDSSAIKKR 502
++ R +IK M+ +S SFDEEILH+ GS +P +TG + WL++NLE+ S D SA KKR
Sbjct: 135 LNKRHVIKVGAMIRFSVKSFDEEILHVYGSPIPDNTGSMHWLDKNLEDDSHTDRSA-KKR 193
Query: 501 IANEGTRDIPENVNIMMDETVPLNANDPSKKSKRRK 394
+ E + I + + E++ L + KKSKR K
Sbjct: 194 GSEE--QPIMLEQDAVDGESLTLESVQKLKKSKRHK 227
>ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264366 [Vitis vinifera]
gi|302142630|emb|CBI19833.3| unnamed protein product
[Vitis vinifera]
Length = 233
Score = 60.5 bits (145), Expect = 2e-06
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = -1
Query: 669 RRIIK*LNMVTYSC-SFDEEILHISGSLVPAHTGCVRWLERNLEEWSKFDSSAIKKRIAN 493
R +IK M+ + S DEEILHISGSL P HTG + WL++ LE+ S S + KKR N
Sbjct: 138 RHVIKVGTMIRFLVKSLDEEILHISGSLNPPHTGSILWLDKKLEDASP-SSRSTKKRREN 196
Query: 492 EGTRDIPENVNIMMDETVPLNANDPSKKSKRRKKGNE 382
+R++ E+ + + L+ + KKSK+RK E
Sbjct: 197 GESREMQEH-DTVDGGVFSLDNSHHIKKSKKRKISEE 232