BLASTX nr result
ID: Rauwolfia21_contig00018974
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00018974
(288 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006340883.1| PREDICTED: DNA mismatch repair protein MSH1,... 86 2e-18
ref|XP_006340884.1| PREDICTED: DNA mismatch repair protein MSH1,... 86 2e-18
ref|XP_004247788.1| PREDICTED: DNA mismatch repair protein MSH1,... 85 4e-18
gb|AAX53097.1| DNA mismatch repair protein [Solanum lycopersicum] 85 4e-18
emb|CBI23729.3| unnamed protein product [Vitis vinifera] 96 6e-18
ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266... 96 6e-18
emb|CAN79853.1| hypothetical protein VITISV_017272 [Vitis vinifera] 95 8e-18
gb|EMJ26626.1| hypothetical protein PRUPE_ppa000475mg [Prunus pe... 82 9e-18
ref|XP_006480235.1| PREDICTED: DNA mismatch repair protein MSH1,... 80 2e-16
ref|XP_006418760.1| hypothetical protein EUTSA_v10002376mg [Eutr... 91 2e-16
ref|XP_004134396.1| PREDICTED: DNA mismatch repair protein MSH1,... 77 2e-16
ref|XP_004170676.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 77 2e-16
ref|XP_006420379.1| hypothetical protein CICLE_v10004190mg [Citr... 79 4e-16
ref|XP_006420381.1| hypothetical protein CICLE_v10004190mg [Citr... 79 4e-16
ref|XP_006420380.1| hypothetical protein CICLE_v10004190mg [Citr... 79 4e-16
ref|XP_006420382.1| hypothetical protein CICLE_v10004190mg [Citr... 79 4e-16
ref|XP_004297941.1| PREDICTED: DNA mismatch repair protein MSH1,... 87 2e-15
ref|XP_002885640.1| hypothetical protein ARALYDRAFT_479946 [Arab... 86 4e-15
ref|XP_004497789.1| PREDICTED: DNA mismatch repair protein MSH1,... 85 1e-14
gb|EXC27690.1| DNA mismatch repair protein mutS [Morus notabilis] 84 1e-14
>ref|XP_006340883.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
isoform X1 [Solanum tuberosum]
Length = 1137
Score = 85.5 bits (210), Expect(2) = 2e-18
Identities = 42/79 (53%), Positives = 49/79 (62%)
Frame = +1
Query: 52 FPNSTQFCGSENMDPLKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLTGPNGAGK 231
FP TQF ++ + L G MKI GLS YWFD A+G+ V NTVDMQS+FLLTGPNG GK
Sbjct: 709 FPTITQFNKCQDTEALNGTEGMKIIGLSPYWFDAARGTGVQNTVDMQSMFLLTGPNGGGK 768
Query: 232 XXXXXXXXXXXXXGICGFM 288
G+CGFM
Sbjct: 769 SSLLRSLCAAALLGMCGFM 787
Score = 32.0 bits (71), Expect(2) = 2e-18
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 14 FLQQSEGRRRKWVFPTLLNF 73
F SEGRRR W+FPT+ F
Sbjct: 696 FSHVSEGRRRNWIFPTITQF 715
>ref|XP_006340884.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
isoform X2 [Solanum tuberosum]
Length = 931
Score = 85.5 bits (210), Expect(2) = 2e-18
Identities = 42/79 (53%), Positives = 49/79 (62%)
Frame = +1
Query: 52 FPNSTQFCGSENMDPLKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLTGPNGAGK 231
FP TQF ++ + L G MKI GLS YWFD A+G+ V NTVDMQS+FLLTGPNG GK
Sbjct: 503 FPTITQFNKCQDTEALNGTEGMKIIGLSPYWFDAARGTGVQNTVDMQSMFLLTGPNGGGK 562
Query: 232 XXXXXXXXXXXXXGICGFM 288
G+CGFM
Sbjct: 563 SSLLRSLCAAALLGMCGFM 581
Score = 32.0 bits (71), Expect(2) = 2e-18
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 14 FLQQSEGRRRKWVFPTLLNF 73
F SEGRRR W+FPT+ F
Sbjct: 490 FSHVSEGRRRNWIFPTITQF 509
>ref|XP_004247788.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial [Solanum
lycopersicum]
Length = 1137
Score = 84.7 bits (208), Expect(2) = 4e-18
Identities = 42/79 (53%), Positives = 49/79 (62%)
Frame = +1
Query: 52 FPNSTQFCGSENMDPLKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLTGPNGAGK 231
FP TQF ++ + L G MKI GLS YWFD A+G+ V NTVDMQS+FLLTGPNG GK
Sbjct: 709 FPTITQFNKCQDTEALNGTDGMKIIGLSPYWFDAARGTGVQNTVDMQSMFLLTGPNGGGK 768
Query: 232 XXXXXXXXXXXXXGICGFM 288
G+CGFM
Sbjct: 769 SSLLRSLCAAALLGMCGFM 787
Score = 32.0 bits (71), Expect(2) = 4e-18
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 14 FLQQSEGRRRKWVFPTLLNF 73
F SEGRRR W+FPT+ F
Sbjct: 696 FSHVSEGRRRNWIFPTITQF 715
>gb|AAX53097.1| DNA mismatch repair protein [Solanum lycopersicum]
Length = 1124
Score = 84.7 bits (208), Expect(2) = 4e-18
Identities = 42/79 (53%), Positives = 49/79 (62%)
Frame = +1
Query: 52 FPNSTQFCGSENMDPLKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLTGPNGAGK 231
FP TQF ++ + L G MKI GLS YWFD A+G+ V NTVDMQS+FLLTGPNG GK
Sbjct: 709 FPTITQFNKCQDTEALNGTDGMKIIGLSPYWFDAARGTGVQNTVDMQSMFLLTGPNGGGK 768
Query: 232 XXXXXXXXXXXXXGICGFM 288
G+CGFM
Sbjct: 769 SSLLRSLCAAALLGMCGFM 787
Score = 32.0 bits (71), Expect(2) = 4e-18
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 14 FLQQSEGRRRKWVFPTLLNF 73
F SEGRRR W+FPT+ F
Sbjct: 696 FSHVSEGRRRNWIFPTITQF 715
>emb|CBI23729.3| unnamed protein product [Vitis vinifera]
Length = 1114
Score = 95.5 bits (236), Expect = 6e-18
Identities = 49/86 (56%), Positives = 58/86 (67%)
Frame = +1
Query: 31 REKKEVGFPNSTQFCGSENMDPLKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLT 210
R +K V FP+ + S++M+PL G MKITGLS YW D+AQGS+VHNTVDM+SLFLLT
Sbjct: 708 RRRKWV-FPSLVELHRSKDMEPLDGANWMKITGLSPYWLDVAQGSAVHNTVDMKSLFLLT 766
Query: 211 GPNGAGKXXXXXXXXXXXXXGICGFM 288
GPNG GK GICGFM
Sbjct: 767 GPNGGGKSSLLRSICAAALLGICGFM 792
>ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266612 [Vitis vinifera]
Length = 1144
Score = 95.5 bits (236), Expect = 6e-18
Identities = 49/86 (56%), Positives = 58/86 (67%)
Frame = +1
Query: 31 REKKEVGFPNSTQFCGSENMDPLKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLT 210
R +K V FP+ + S++M+PL G MKITGLS YW D+AQGS+VHNTVDM+SLFLLT
Sbjct: 708 RRRKWV-FPSLVELHRSKDMEPLDGANWMKITGLSPYWLDVAQGSAVHNTVDMKSLFLLT 766
Query: 211 GPNGAGKXXXXXXXXXXXXXGICGFM 288
GPNG GK GICGFM
Sbjct: 767 GPNGGGKSSLLRSICAAALLGICGFM 792
>emb|CAN79853.1| hypothetical protein VITISV_017272 [Vitis vinifera]
Length = 210
Score = 95.1 bits (235), Expect = 8e-18
Identities = 46/65 (70%), Positives = 49/65 (75%)
Frame = -2
Query: 287 MKPHIPSSAAAQSDLNKLDLPAPFGPVKRNSDCISTVLCTELPCAISNQYRDSPVIFITR 108
+ PHIPS+AAAQ D KLDLP P GPVKRN+D ISTVLCT LPCA SNQY D PVIFI
Sbjct: 83 INPHIPSNAAAQIDRTKLDLPPPLGPVKRNNDFISTVLCTALPCATSNQYGDKPVIFIQL 142
Query: 107 YPFNG 93
P G
Sbjct: 143 APSRG 147
>gb|EMJ26626.1| hypothetical protein PRUPE_ppa000475mg [Prunus persica]
Length = 1144
Score = 82.0 bits (201), Expect(2) = 9e-18
Identities = 39/68 (57%), Positives = 46/68 (67%)
Frame = +1
Query: 85 NMDPLKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLTGPNGAGKXXXXXXXXXXX 264
++ P+ G MKI GLS YW D+A+GS+V+NTVDMQSLFLLTGPNG GK
Sbjct: 727 DVKPVNGENGMKIVGLSPYWLDVAEGSAVNNTVDMQSLFLLTGPNGGGKSSLLRSICAAA 786
Query: 265 XXGICGFM 288
GICGFM
Sbjct: 787 LLGICGFM 794
Score = 33.5 bits (75), Expect(2) = 9e-18
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2
Query: 14 FLQQSEGRRRKWVFPTL 64
F SEGRRRKWVFPTL
Sbjct: 702 FAHVSEGRRRKWVFPTL 718
>ref|XP_006480235.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
isoform X1 [Citrus sinensis]
Length = 1137
Score = 79.7 bits (195), Expect(2) = 2e-16
Identities = 39/64 (60%), Positives = 42/64 (65%)
Frame = +1
Query: 97 LKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLTGPNGAGKXXXXXXXXXXXXXGI 276
L G +KI GLS YWFD A+GS+VHNTVDMQSLFLLTGPNG GK GI
Sbjct: 725 LDGADCLKINGLSPYWFDAAEGSAVHNTVDMQSLFLLTGPNGGGKSSLLRSICAASLLGI 784
Query: 277 CGFM 288
CG M
Sbjct: 785 CGLM 788
Score = 31.6 bits (70), Expect(2) = 2e-16
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2
Query: 14 FLQQSEGRRRKWVFPTL 64
F SEGRRRKWVFP L
Sbjct: 704 FAHVSEGRRRKWVFPAL 720
>ref|XP_006418760.1| hypothetical protein EUTSA_v10002376mg [Eutrema salsugineum]
gi|557096688|gb|ESQ37196.1| hypothetical protein
EUTSA_v10002376mg [Eutrema salsugineum]
Length = 1122
Score = 90.5 bits (223), Expect = 2e-16
Identities = 47/86 (54%), Positives = 53/86 (61%)
Frame = +1
Query: 31 REKKEVGFPNSTQFCGSENMDPLKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLT 210
R +K V FP F E PL G MK++GLS YWFD+A G++VHNTVDMQSLFLLT
Sbjct: 713 RRRKWV-FPTLVGFSTEEGAKPLDGAGRMKLSGLSPYWFDVASGTAVHNTVDMQSLFLLT 771
Query: 211 GPNGAGKXXXXXXXXXXXXXGICGFM 288
GPNG GK GICGFM
Sbjct: 772 GPNGGGKSSLLRSICAAALLGICGFM 797
>ref|XP_004134396.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
[Cucumis sativus]
Length = 1122
Score = 77.4 bits (189), Expect(2) = 2e-16
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +1
Query: 79 SENMDPLKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLTGPNGAGKXXXXXXXXX 258
S+ + L+G MK+ GLS YWFD+ +G++V NT++M+SLFLLTGPNG GK
Sbjct: 698 SKGIKSLEGKVAMKLVGLSPYWFDVVEGNAVQNTIEMESLFLLTGPNGGGKSSLLRSICA 757
Query: 259 XXXXGICGFM 288
GICGFM
Sbjct: 758 ATLLGICGFM 767
Score = 33.5 bits (75), Expect(2) = 2e-16
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2
Query: 14 FLQQSEGRRRKWVFPTL 64
F SEGRRRKWVFPTL
Sbjct: 675 FAHVSEGRRRKWVFPTL 691
>ref|XP_004170676.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH1,
mitochondrial-like, partial [Cucumis sativus]
Length = 675
Score = 77.4 bits (189), Expect(2) = 2e-16
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +1
Query: 79 SENMDPLKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLTGPNGAGKXXXXXXXXX 258
S+ + L+G MK+ GLS YWFD+ +G++V NT++M+SLFLLTGPNG GK
Sbjct: 282 SKGIKSLEGKVAMKLVGLSPYWFDVVEGNAVQNTIEMESLFLLTGPNGGGKSSLLRSICA 341
Query: 259 XXXXGICGFM 288
GICGFM
Sbjct: 342 ATLLGICGFM 351
Score = 33.5 bits (75), Expect(2) = 2e-16
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2
Query: 14 FLQQSEGRRRKWVFPTL 64
F SEGRRRKWVFPTL
Sbjct: 259 FAHVSEGRRRKWVFPTL 275
>ref|XP_006420379.1| hypothetical protein CICLE_v10004190mg [Citrus clementina]
gi|557522252|gb|ESR33619.1| hypothetical protein
CICLE_v10004190mg [Citrus clementina]
Length = 1137
Score = 78.6 bits (192), Expect(2) = 4e-16
Identities = 38/64 (59%), Positives = 42/64 (65%)
Frame = +1
Query: 97 LKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLTGPNGAGKXXXXXXXXXXXXXGI 276
L G +K+ GLS YWFD A+GS+VHNTVDMQSLFLLTGPNG GK GI
Sbjct: 725 LDGADCLKMNGLSPYWFDAAEGSAVHNTVDMQSLFLLTGPNGGGKSSLLRSICAASLLGI 784
Query: 277 CGFM 288
CG M
Sbjct: 785 CGLM 788
Score = 31.6 bits (70), Expect(2) = 4e-16
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2
Query: 14 FLQQSEGRRRKWVFPTL 64
F SEGRRRKWVFP L
Sbjct: 704 FAHVSEGRRRKWVFPAL 720
>ref|XP_006420381.1| hypothetical protein CICLE_v10004190mg [Citrus clementina]
gi|557522254|gb|ESR33621.1| hypothetical protein
CICLE_v10004190mg [Citrus clementina]
Length = 889
Score = 78.6 bits (192), Expect(2) = 4e-16
Identities = 38/64 (59%), Positives = 42/64 (65%)
Frame = +1
Query: 97 LKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLTGPNGAGKXXXXXXXXXXXXXGI 276
L G +K+ GLS YWFD A+GS+VHNTVDMQSLFLLTGPNG GK GI
Sbjct: 477 LDGADCLKMNGLSPYWFDAAEGSAVHNTVDMQSLFLLTGPNGGGKSSLLRSICAASLLGI 536
Query: 277 CGFM 288
CG M
Sbjct: 537 CGLM 540
Score = 31.6 bits (70), Expect(2) = 4e-16
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2
Query: 14 FLQQSEGRRRKWVFPTL 64
F SEGRRRKWVFP L
Sbjct: 456 FAHVSEGRRRKWVFPAL 472
>ref|XP_006420380.1| hypothetical protein CICLE_v10004190mg [Citrus clementina]
gi|557522253|gb|ESR33620.1| hypothetical protein
CICLE_v10004190mg [Citrus clementina]
Length = 829
Score = 78.6 bits (192), Expect(2) = 4e-16
Identities = 38/64 (59%), Positives = 42/64 (65%)
Frame = +1
Query: 97 LKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLTGPNGAGKXXXXXXXXXXXXXGI 276
L G +K+ GLS YWFD A+GS+VHNTVDMQSLFLLTGPNG GK GI
Sbjct: 725 LDGADCLKMNGLSPYWFDAAEGSAVHNTVDMQSLFLLTGPNGGGKSSLLRSICAASLLGI 784
Query: 277 CGFM 288
CG M
Sbjct: 785 CGLM 788
Score = 31.6 bits (70), Expect(2) = 4e-16
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2
Query: 14 FLQQSEGRRRKWVFPTL 64
F SEGRRRKWVFP L
Sbjct: 704 FAHVSEGRRRKWVFPAL 720
>ref|XP_006420382.1| hypothetical protein CICLE_v10004190mg [Citrus clementina]
gi|557522255|gb|ESR33622.1| hypothetical protein
CICLE_v10004190mg [Citrus clementina]
Length = 581
Score = 78.6 bits (192), Expect(2) = 4e-16
Identities = 38/64 (59%), Positives = 42/64 (65%)
Frame = +1
Query: 97 LKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLTGPNGAGKXXXXXXXXXXXXXGI 276
L G +K+ GLS YWFD A+GS+VHNTVDMQSLFLLTGPNG GK GI
Sbjct: 477 LDGADCLKMNGLSPYWFDAAEGSAVHNTVDMQSLFLLTGPNGGGKSSLLRSICAASLLGI 536
Query: 277 CGFM 288
CG M
Sbjct: 537 CGLM 540
Score = 31.6 bits (70), Expect(2) = 4e-16
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2
Query: 14 FLQQSEGRRRKWVFPTL 64
F SEGRRRKWVFP L
Sbjct: 456 FAHVSEGRRRKWVFPAL 472
>ref|XP_004297941.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 1279
Score = 87.4 bits (215), Expect = 2e-15
Identities = 45/86 (52%), Positives = 56/86 (65%)
Frame = +1
Query: 31 REKKEVGFPNSTQFCGSENMDPLKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLT 210
R +K V FP + SEN+ PL+G M+I GLS YW ++A+GS+V+NTVDMQSLFLLT
Sbjct: 846 RRRKWV-FPALGESSWSENVKPLRGENRMEIVGLSPYWLNVAEGSAVNNTVDMQSLFLLT 904
Query: 211 GPNGAGKXXXXXXXXXXXXXGICGFM 288
GPNG GK G+CGFM
Sbjct: 905 GPNGGGKSSLLRSICAAALLGVCGFM 930
>ref|XP_002885640.1| hypothetical protein ARALYDRAFT_479946 [Arabidopsis lyrata subsp.
lyrata] gi|297331480|gb|EFH61899.1| hypothetical protein
ARALYDRAFT_479946 [Arabidopsis lyrata subsp. lyrata]
Length = 1115
Score = 86.3 bits (212), Expect = 4e-15
Identities = 45/86 (52%), Positives = 52/86 (60%)
Frame = +1
Query: 31 REKKEVGFPNSTQFCGSENMDPLKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLT 210
R +K V FP +F E PL G MK+TGLS YWFD++ G++VHNTVDMQSLFLLT
Sbjct: 706 RRRKWV-FPTLVRFSTDEGAKPLDGASRMKLTGLSPYWFDVSSGTAVHNTVDMQSLFLLT 764
Query: 211 GPNGAGKXXXXXXXXXXXXXGICGFM 288
GPNG GK GI G M
Sbjct: 765 GPNGGGKSSLLRSICAAALLGISGLM 790
>ref|XP_004497789.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
[Cicer arietinum]
Length = 1141
Score = 84.7 bits (208), Expect = 1e-14
Identities = 46/86 (53%), Positives = 52/86 (60%)
Frame = +1
Query: 31 REKKEVGFPNSTQFCGSENMDPLKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLT 210
R +K V FP + G E+ PL R MKI GL YWF+IA+G +VHNTVDMQSLFLLT
Sbjct: 712 RRRKWV-FPTIVESQGLEDGKPLDKNREMKIVGLLPYWFNIAEGGAVHNTVDMQSLFLLT 770
Query: 211 GPNGAGKXXXXXXXXXXXXXGICGFM 288
GPNG GK GICG M
Sbjct: 771 GPNGGGKSSLLRSICAAALLGICGLM 796
>gb|EXC27690.1| DNA mismatch repair protein mutS [Morus notabilis]
Length = 756
Score = 84.3 bits (207), Expect = 1e-14
Identities = 44/86 (51%), Positives = 54/86 (62%)
Frame = +1
Query: 31 REKKEVGFPNSTQFCGSENMDPLKGYRVMKITGLSLYWFDIAQGSSVHNTVDMQSLFLLT 210
R +K V FP + S+++ P G MK+ GLS YWFD+A+GS+V+NTVDMQSL LLT
Sbjct: 315 RRRKWV-FPTLLELPLSKDVKPSNGAEGMKLVGLSPYWFDVAEGSAVNNTVDMQSLLLLT 373
Query: 211 GPNGAGKXXXXXXXXXXXXXGICGFM 288
GPNG GK GICGFM
Sbjct: 374 GPNGGGKSSLLRSLCAAALLGICGFM 399