BLASTX nr result

ID: Rauwolfia21_contig00018788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00018788
         (556 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006366080.1| PREDICTED: uncharacterized protein LOC102593...    96   6e-18
ref|XP_002514353.1| conserved hypothetical protein [Ricinus comm...    67   4e-09
ref|XP_002514354.1| conserved hypothetical protein [Ricinus comm...    58   1e-06

>ref|XP_006366080.1| PREDICTED: uncharacterized protein LOC102593462 [Solanum tuberosum]
          Length = 137

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 56/127 (44%), Positives = 78/127 (61%), Gaps = 15/127 (11%)
 Frame = -1

Query: 346 MGGKVTVLENRTKENIEIRVWVDPDRPDQFQHIIRIKP-GGRKRVRATAFGCRRA---SN 179
           MG K+TV+ENR  ++IEIRVWV P RPD+FQ IIRI+  GG K V +  F  R A   ++
Sbjct: 1   MGAKLTVIENRCNDDIEIRVWVPPARPDKFQSIIRIEANGGWKEVNSKNFIHRDATILND 60

Query: 178 SNSEGILSQILMMVYVNGGWTGRYILPLQLLEYAKVIFP*S-----------LSFHVQVY 32
            + E  +S  L+M+Y++G +TG Y LP+ L++YAKVI   +            +FH   +
Sbjct: 61  DDEEEFVSSTLLMIYIDGVYTGYYFLPIHLVKYAKVICDINEDGLFAVQGIKPTFHFCRF 120

Query: 31  SFCAFFP 11
             CAFFP
Sbjct: 121 KGCAFFP 127


>ref|XP_002514353.1| conserved hypothetical protein [Ricinus communis]
           gi|223546809|gb|EEF48307.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 132

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 36/93 (38%), Positives = 56/93 (60%)
 Frame = -1

Query: 346 MGGKVTVLENRTKENIEIRVWVDPDRPDQFQHIIRIKPGGRKRVRATAFGCRRASNSNSE 167
           MG ++T ++N+    +E+RV+  P RPD F+ IIRIKPGG+  +     G      S   
Sbjct: 1   MGVRLTTIKNKLSVEMELRVFAAPARPDHFRQIIRIKPGGKANLLVKTLG----EESRIS 56

Query: 166 GILSQILMMVYVNGGWTGRYILPLQLLEYAKVI 68
           G L  +++MVYV+G ++G  +LP  L  Y++VI
Sbjct: 57  GRL--LIIMVYVDGVYSGVTLLPAYLASYSEVI 87


>ref|XP_002514354.1| conserved hypothetical protein [Ricinus communis]
           gi|223546810|gb|EEF48308.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 117

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/78 (41%), Positives = 47/78 (60%)
 Frame = -1

Query: 301 IEIRVWVDPDRPDQFQHIIRIKPGGRKRVRATAFGCRRASNSNSEGILSQILMMVYVNGG 122
           +EIRV+V PDRPD+F+ IIRIKPG  K +   +F C    N         ++ M++V G 
Sbjct: 1   MEIRVFVPPDRPDRFRKIIRIKPGENKEILVKSF-CDWDINPE-----RPVMFMLFVEGV 54

Query: 121 WTGRYILPLQLLEYAKVI 68
           +TG  ++P  L+ Y +VI
Sbjct: 55  YTGVSLMPTYLIGYKRVI 72


Top