BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00018582
         (1399 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354580.1| PREDICTED: DNA-directed RNA polymerases II, ...   166   2e-38
ref|XP_004229520.1| PREDICTED: probable DNA-directed RNA polymer...   164   8e-38
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   149   2e-33
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...   149   2e-33
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I...   147   1e-32
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ...   146   2e-32
ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, I...   146   2e-32
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ...   146   2e-32
ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr...   146   2e-32
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I...   145   3e-32
ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group] g...   145   5e-32
gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indi...   145   5e-32
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ...   144   9e-32
gb|EMJ09140.1| hypothetical protein PRUPE_ppa017455mg, partial [...   144   9e-32
ref|XP_002319223.1| hypothetical protein POPTR_0013s06920g [Popu...   144   9e-32
ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S...   143   2e-31
gb|EOY13785.1| RNA polymerase Rpb8 isoform 1 [Theobroma cacao]        142   3e-31
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S...   142   3e-31
ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, I...   142   4e-31
gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun...   141   8e-31

>ref|XP_006354580.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like isoform X1 [Solanum tuberosum]
           gi|565376162|ref|XP_006354581.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X2
           [Solanum tuberosum]
          Length = 144

 Score =  166 bits (420), Expect = 2e-38
 Identities = 87/144 (60%), Positives = 112/144 (77%), Gaps = 2/144 (1%)
 Frame = +1

Query: 154 MAQYHFDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLL 333
           M  +HFDEII    VD +GKKYDKVSRI+A S  G   +QLD+NSE+YPM+ KE YRM++
Sbjct: 1   MDAFHFDEIIKVVKVDADGKKYDKVSRIEAESSDGASSIQLDINSELYPMKRKELYRMVI 60

Query: 334 SETLSLDGSA--SFPEGKQKSLADKFEYVMHGLLYKISEEKSKAETKVIAYMSFGGLQLM 507
           S TL ++GSA  S+P  + KSL DKFEY++HGL+YK+S E S A+ KV+ Y+SFGGLQLM
Sbjct: 61  STTL-MEGSAVTSYPP-EGKSLLDKFEYIVHGLVYKVSMEGSGADKKVVVYVSFGGLQLM 118

Query: 508 LKAPYSKMLRFKVDQRLFLLLRKM 579
           LK+   K+ +FK+DQ+LFLLLRKM
Sbjct: 119 LKSDALKVQKFKLDQKLFLLLRKM 142


>ref|XP_004229520.1| PREDICTED: probable DNA-directed RNA polymerases I, II, and III
           subunit RPABC3-like [Solanum lycopersicum]
          Length = 144

 Score =  164 bits (415), Expect = 8e-38
 Identities = 86/144 (59%), Positives = 111/144 (77%), Gaps = 2/144 (1%)
 Frame = +1

Query: 154 MAQYHFDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLL 333
           M  +HFDEII    VD +GKKY+KVSRI+A S  G   +QLD+NSE+YPM+ KE YRM++
Sbjct: 1   MDAFHFDEIIKVVKVDADGKKYEKVSRIEAESSDGATSIQLDINSELYPMKRKELYRMVI 60

Query: 334 SETLSLDGSA--SFPEGKQKSLADKFEYVMHGLLYKISEEKSKAETKVIAYMSFGGLQLM 507
           S TL ++GSA  S+P  + KSL DKFEY++HGL+YK+S E S A+ KV+ Y+SFGGLQLM
Sbjct: 61  STTL-MEGSAVTSYPP-EGKSLLDKFEYIVHGLVYKVSMEGSGADKKVVVYVSFGGLQLM 118

Query: 508 LKAPYSKMLRFKVDQRLFLLLRKM 579
           LK+   K  +FK+DQ+LFLLLRKM
Sbjct: 119 LKSDALKTQKFKLDQKLFLLLRKM 142


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  149 bits (377), Expect = 2e-33
 Identities = 76/146 (52%), Positives = 108/146 (73%), Gaps = 4/146 (2%)
 Frame = +1

Query: 154 MAQYHFDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLL 333
           M ++ F++I     +D +GKK+D+VSRI+ARSE  ++YMQLDV +E+YPMRA +++ M+L
Sbjct: 251 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVL 310

Query: 334 SETLSLDGSAS---FPEGKQKSLADKFEYVMHGLLYKISEEKSKAE-TKVIAYMSFGGLQ 501
           + TL+LDG+     + +  +K+LADKF+YVMHG LYKISE+ S  + TKV  Y SFGGL 
Sbjct: 311 APTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLL 370

Query: 502 LMLKAPYSKMLRFKVDQRLFLLLRKM 579
           +MLK   S    F++DQRLFLL+RK+
Sbjct: 371 MMLKGDPSSAASFELDQRLFLLIRKV 396


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score =  149 bits (377), Expect = 2e-33
 Identities = 76/146 (52%), Positives = 108/146 (73%), Gaps = 4/146 (2%)
 Frame = +1

Query: 154 MAQYHFDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLL 333
           M ++ F++I     +D +GKK+D+VSRI+ARSE  ++YMQLDV +E+YPMRA +++ M+L
Sbjct: 46  MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVL 105

Query: 334 SETLSLDGSAS---FPEGKQKSLADKFEYVMHGLLYKISEEKSKAE-TKVIAYMSFGGLQ 501
           + TL+LDG+     + +  +K+LADKF+YVMHG LYKISE+ S  + TKV  Y SFGGL 
Sbjct: 106 APTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLL 165

Query: 502 LMLKAPYSKMLRFKVDQRLFLLLRKM 579
           +MLK   S    F++DQRLFLL+RK+
Sbjct: 166 MMLKGDPSSAASFELDQRLFLLIRKV 191


>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like isoform 1 [Solanum lycopersicum]
           gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3-like
           isoform 2 [Solanum lycopersicum]
          Length = 145

 Score =  147 bits (370), Expect = 1e-32
 Identities = 73/145 (50%), Positives = 105/145 (72%), Gaps = 3/145 (2%)
 Frame = +1

Query: 154 MAQYHFDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLL 333
           M +  F++I      D +GKK+D+V+RI+ARSE  +++M LDVN+EIYPMR K+K+ M+L
Sbjct: 1   MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL 60

Query: 334 SETLSLDGSAS---FPEGKQKSLADKFEYVMHGLLYKISEEKSKAETKVIAYMSFGGLQL 504
           + TL+LDG+     F +G +KSLADKFEYVMHG LY+ISEE S    K   ++SFGGL +
Sbjct: 61  ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120

Query: 505 MLKAPYSKMLRFKVDQRLFLLLRKM 579
            L+   S   +F++DQ++FLL+RK+
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145


>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Solanum tuberosum]
          Length = 145

 Score =  146 bits (369), Expect = 2e-32
 Identities = 72/145 (49%), Positives = 105/145 (72%), Gaps = 3/145 (2%)
 Frame = +1

Query: 154 MAQYHFDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLL 333
           M +  F++I      D +GKK+D+V+RI+ARSE  +++M LD+N+EIYPMR K+K+ M+L
Sbjct: 1   MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVL 60

Query: 334 SETLSLDGSAS---FPEGKQKSLADKFEYVMHGLLYKISEEKSKAETKVIAYMSFGGLQL 504
           + TL+LDG+     F +G +KSLADKFEYVMHG LY+ISEE S    K   ++SFGGL +
Sbjct: 61  ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120

Query: 505 MLKAPYSKMLRFKVDQRLFLLLRKM 579
            L+   S   +F++DQ++FLL+RK+
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145


>ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC3 [Vitis vinifera] gi|296084254|emb|CBI24642.3|
           unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  146 bits (369), Expect = 2e-32
 Identities = 74/145 (51%), Positives = 106/145 (73%), Gaps = 3/145 (2%)
 Frame = +1

Query: 154 MAQYHFDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLL 333
           M +  FD+I V    D  GKK+DKVSRI+A SE  +++MQLDVN E YP++A EK+RM+L
Sbjct: 1   MVETFFDDIFVVDGQDPGGKKFDKVSRIEASSEQYDMFMQLDVNIEAYPIQAGEKFRMVL 60

Query: 334 SETLSLDGSAS---FPEGKQKSLADKFEYVMHGLLYKISEEKSKAETKVIAYMSFGGLQL 504
           + TL LDG+     F +G+QKSLADKF+YVM+G++YK+S E S  + K + Y SFGGL +
Sbjct: 61  APTLHLDGADVTDYFTQGEQKSLADKFDYVMYGIIYKVSNEGSGPDVKGVIYASFGGLLM 120

Query: 505 MLKAPYSKMLRFKVDQRLFLLLRKM 579
           +LK   S + + +V++RLFLL++K+
Sbjct: 121 ILKGDPSNLNKLEVNKRLFLLMKKV 145


>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like isoform X1 [Oryza brachyantha]
           gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X2
           [Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X3 [Oryza brachyantha]
           gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X4
           [Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X5 [Oryza brachyantha]
          Length = 146

 Score =  146 bits (368), Expect = 2e-32
 Identities = 75/146 (51%), Positives = 107/146 (73%), Gaps = 4/146 (2%)
 Frame = +1

Query: 154 MAQYHFDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLL 333
           M ++ F++I     +D +GKK+D+VSRI+ARSE  ++YMQLDV +E+YPMR  +K+ M+L
Sbjct: 1   MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVL 60

Query: 334 SETLSLDGSAS---FPEGKQKSLADKFEYVMHGLLYKISEEKSKAE-TKVIAYMSFGGLQ 501
           + TL+LDG+     + +  +K+LADK++YVMHG LYKISE+ S  + TKV  Y SFGGL 
Sbjct: 61  APTLNLDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLL 120

Query: 502 LMLKAPYSKMLRFKVDQRLFLLLRKM 579
           +MLK   S    F++DQRLFLL+RK+
Sbjct: 121 MMLKGDPSTAANFELDQRLFLLIRKV 146


>ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina]
           gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like [Citrus
           sinensis] gi|557545143|gb|ESR56121.1| hypothetical
           protein CICLE_v10022723mg [Citrus clementina]
          Length = 146

 Score =  146 bits (368), Expect = 2e-32
 Identities = 71/140 (50%), Positives = 103/140 (73%), Gaps = 3/140 (2%)
 Frame = +1

Query: 169 FDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLLSETLS 348
           F++I V + +D +GKK+DKVSRI+A S++ ++YM LDVNSE+YPMR  +K+ M L+ TL+
Sbjct: 7   FEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHTLN 66

Query: 349 LDGSAS---FPEGKQKSLADKFEYVMHGLLYKISEEKSKAETKVIAYMSFGGLQLMLKAP 519
           LDG+     +  G +K+LADK+EY+MHG L+KI +E S    K   Y+S+GGL +MLK  
Sbjct: 67  LDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLKGD 126

Query: 520 YSKMLRFKVDQRLFLLLRKM 579
            S +  F++DQRLFLL+RK+
Sbjct: 127 PSYVSHFELDQRLFLLMRKL 146


>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3 isoform 1 [Vitis vinifera]
           gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3 isoform 2
           [Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
           protein product [Vitis vinifera]
          Length = 145

 Score =  145 bits (367), Expect = 3e-32
 Identities = 75/140 (53%), Positives = 99/140 (70%), Gaps = 3/140 (2%)
 Frame = +1

Query: 169 FDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLLSETLS 348
           F +I     +D +GKK+DKVSRI+A+SE  ++YMQLDVN+EIYPM A EK+ M L+ TL 
Sbjct: 6   FGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSLASTLD 65

Query: 349 LDGSAS---FPEGKQKSLADKFEYVMHGLLYKISEEKSKAETKVIAYMSFGGLQLMLKAP 519
           LDG+     + +  +KSLADKFEYVMHG LYKISEE S    K + Y+SFGGL +ML   
Sbjct: 66  LDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLMMLSGD 125

Query: 520 YSKMLRFKVDQRLFLLLRKM 579
            +   +  +DQR+FLL+RK+
Sbjct: 126 PANTAKLDLDQRVFLLIRKV 145


>ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group]
           gi|29244685|gb|AAO73277.1| putative RNA polymerase
           [Oryza sativa Japonica Group] gi|41469638|gb|AAS07361.1|
           putative RNA polymerase [Oryza sativa Japonica Group]
           gi|108712076|gb|ABF99871.1| RNA polymerase Rpb8 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|108712077|gb|ABF99872.1| RNA polymerase Rpb8 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113550351|dbj|BAF13794.1| Os03g0845700 [Oryza sativa
           Japonica Group] gi|125588624|gb|EAZ29288.1| hypothetical
           protein OsJ_13351 [Oryza sativa Japonica Group]
           gi|215692970|dbj|BAG88390.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 148

 Score =  145 bits (365), Expect = 5e-32
 Identities = 75/148 (50%), Positives = 107/148 (72%), Gaps = 6/148 (4%)
 Frame = +1

Query: 154 MAQYHFDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLL 333
           MA++ F++I     +D +GKK+D+VSRI+ARS+  ++YMQLDV +++YPM   +++ M+L
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 60

Query: 334 SETLSLDG---SASFPEGKQKSLADKFEYVMHGLLYKISEEKSKAE---TKVIAYMSFGG 495
             TL+LDG   SA F +  +K+LADK+EYVMHG LYKISE+K  ++    KV  Y SFGG
Sbjct: 61  VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 120

Query: 496 LQLMLKAPYSKMLRFKVDQRLFLLLRKM 579
           L +MLK   S    F++DQRLFLL+RK+
Sbjct: 121 LLVMLKGDPSSAANFELDQRLFLLMRKV 148


>gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indica Group]
          Length = 215

 Score =  145 bits (365), Expect = 5e-32
 Identities = 75/148 (50%), Positives = 107/148 (72%), Gaps = 6/148 (4%)
 Frame = +1

Query: 154 MAQYHFDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLL 333
           MA++ F++I     +D +GKK+D+VSRI+ARS+  ++YMQLDV +++YPM   +++ M+L
Sbjct: 68  MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 127

Query: 334 SETLSLDG---SASFPEGKQKSLADKFEYVMHGLLYKISEEKSKAE---TKVIAYMSFGG 495
             TL+LDG   SA F +  +K+LADK+EYVMHG LYKISE+K  ++    KV  Y SFGG
Sbjct: 128 VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 187

Query: 496 LQLMLKAPYSKMLRFKVDQRLFLLLRKM 579
           L +MLK   S    F++DQRLFLL+RK+
Sbjct: 188 LLVMLKGDPSSAANFELDQRLFLLMRKV 215


>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Oryza brachyantha]
          Length = 147

 Score =  144 bits (363), Expect = 9e-32
 Identities = 75/147 (51%), Positives = 104/147 (70%), Gaps = 5/147 (3%)
 Frame = +1

Query: 154 MAQYHFDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLL 333
           MA++ F++I     +D +GKK+D+VSRI+AR+E   +YMQLDV +++YPM   +K+ M+L
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARNEQLNVYMQLDVATDVYPMHPGDKFTMVL 60

Query: 334 SETLSLDGSAS---FPEGKQKSLADKFEYVMHGLLYKISEEK--SKAETKVIAYMSFGGL 498
             TL+LDG+     F +  +K+LADK+EYVMHG LYKISE+K  S    KV  Y SFGGL
Sbjct: 61  VPTLNLDGTPDTGFFTQAGRKTLADKYEYVMHGKLYKISEDKETSGQNAKVEMYASFGGL 120

Query: 499 QLMLKAPYSKMLRFKVDQRLFLLLRKM 579
            +MLK   S    F++DQRLFLL+RK+
Sbjct: 121 LMMLKGDPSSAANFELDQRLFLLMRKV 147


>gb|EMJ09140.1| hypothetical protein PRUPE_ppa017455mg, partial [Prunus persica]
          Length = 170

 Score =  144 bits (363), Expect = 9e-32
 Identities = 79/158 (50%), Positives = 106/158 (67%), Gaps = 16/158 (10%)
 Frame = +1

Query: 154 MAQYHFDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLL 333
           M  + FD+I   + VD +GKK+DKVSRI A+SE   + + LDVN+EIYPM  K+K+ M+L
Sbjct: 13  MVDFLFDDIFTLEKVDPDGKKFDKVSRIVAQSEKRGVSLTLDVNTEIYPMHEKDKFLMVL 72

Query: 334 SETLSLDGSA-----------SFPEGKQKSLADKFEYVMHGLLYKISEEKSKAE-----T 465
           S TL+  G+            +F E +QKSLADKF+Y+MHGLLYK+S EK K+E      
Sbjct: 73  SPTLNWSGAPVAGKQGQVLYYTF-EVEQKSLADKFDYIMHGLLYKMSTEKGKSEYSKEGV 131

Query: 466 KVIAYMSFGGLQLMLKAPYSKMLRFKVDQRLFLLLRKM 579
           KV  Y SFGGLQ+MLK   +   +FK+DQ +FLL+RK+
Sbjct: 132 KVEVYASFGGLQMMLKGDPTNCTKFKIDQNMFLLIRKL 169


>ref|XP_002319223.1| hypothetical protein POPTR_0013s06920g [Populus trichocarpa]
           gi|118487468|gb|ABK95561.1| unknown [Populus
           trichocarpa] gi|222857599|gb|EEE95146.1| hypothetical
           protein POPTR_0013s06920g [Populus trichocarpa]
          Length = 143

 Score =  144 bits (363), Expect = 9e-32
 Identities = 73/138 (52%), Positives = 101/138 (73%), Gaps = 3/138 (2%)
 Frame = +1

Query: 175 EIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLLSETLSLD 354
           +  V + ++ +GKKYDKVSRI ARSE G++YM LDV++EIYP+  K +Y +LL+ETL+ D
Sbjct: 6   DFFVIEKLNPDGKKYDKVSRIVARSEKGDLYMVLDVHTEIYPIEEKSRYLVLLTETLNTD 65

Query: 355 GSASFP---EGKQKSLADKFEYVMHGLLYKISEEKSKAETKVIAYMSFGGLQLMLKAPYS 525
           G+   P   +GKQ S  DKFEYV HG LYKI +E S A+ K+  Y+SFGGLQL+L+   S
Sbjct: 66  GTPVDPRNAQGKQPSKEDKFEYVTHGKLYKIDKEGSGADFKLEIYISFGGLQLLLRGSPS 125

Query: 526 KMLRFKVDQRLFLLLRKM 579
            + RF++D+  F+L+RKM
Sbjct: 126 SLARFQLDKNYFMLMRKM 143


>ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor]
           gi|241917379|gb|EER90523.1| hypothetical protein
           SORBIDRAFT_01g001420 [Sorghum bicolor]
          Length = 145

 Score =  143 bits (361), Expect = 2e-31
 Identities = 70/145 (48%), Positives = 104/145 (71%), Gaps = 3/145 (2%)
 Frame = +1

Query: 154 MAQYHFDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLL 333
           M+++ F++  V   +D +GKK+D+VSR++ARSE   +YMQLDV +++YPM+  EK+ M+L
Sbjct: 1   MSEHLFEDTFVVNRLDPDGKKFDRVSRVEARSEQLAMYMQLDVATDVYPMQPNEKFNMVL 60

Query: 334 SETLSLDGSAS---FPEGKQKSLADKFEYVMHGLLYKISEEKSKAETKVIAYMSFGGLQL 504
           + TL+LDG+     + +  +K+LAD +EYVMHG LYKISE+ S    KV  Y SFGGL +
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMHGKLYKISEDTSSQNAKVEIYASFGGLLM 120

Query: 505 MLKAPYSKMLRFKVDQRLFLLLRKM 579
           +L+   S    F++DQRLFLL+RK+
Sbjct: 121 LLRGDPSTAASFELDQRLFLLMRKV 145


>gb|EOY13785.1| RNA polymerase Rpb8 isoform 1 [Theobroma cacao]
          Length = 145

 Score =  142 bits (358), Expect = 3e-31
 Identities = 70/139 (50%), Positives = 103/139 (74%), Gaps = 2/139 (1%)
 Frame = +1

Query: 169 FDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLLSETLS 348
           F++I V   +D +GKK+DKV+RI+ARS++ +++M LDVNSEIYPM   +K+ M L+ TL+
Sbjct: 7   FEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNSEIYPMHVGDKFTMALAHTLN 66

Query: 349 LDGS--ASFPEGKQKSLADKFEYVMHGLLYKISEEKSKAETKVIAYMSFGGLQLMLKAPY 522
           LDG+    +    +KSLADK+EYVMHG LYK+S++ S    K   Y+S+GGL +ML+   
Sbjct: 67  LDGTPDTGYYTPGRKSLADKYEYVMHGKLYKVSDDGSGKGLKAEIYVSYGGLLMMLRGEA 126

Query: 523 SKMLRFKVDQRLFLLLRKM 579
           S + +F++DQRLFLL+RK+
Sbjct: 127 SHVSQFELDQRLFLLMRKL 145


>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
           gi|241919960|gb|EER93104.1| hypothetical protein
           SORBIDRAFT_01g001330 [Sorghum bicolor]
          Length = 145

 Score =  142 bits (358), Expect = 3e-31
 Identities = 70/145 (48%), Positives = 104/145 (71%), Gaps = 3/145 (2%)
 Frame = +1

Query: 154 MAQYHFDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLL 333
           M+++ F++  +   +D +GKK+DKVSR++ARSE   +YMQLDV +++YP+RA EK+ M+L
Sbjct: 1   MSEHLFEDTFIVSRLDPDGKKFDKVSRVEARSEQLGMYMQLDVATDVYPLRAGEKFNMVL 60

Query: 334 SETLSLDGSAS---FPEGKQKSLADKFEYVMHGLLYKISEEKSKAETKVIAYMSFGGLQL 504
           + TL+LDG+     + +  +K+LAD +EYVM G LYKISE+ S    KV  Y SFGGL +
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLLM 120

Query: 505 MLKAPYSKMLRFKVDQRLFLLLRKM 579
           +L+   S    F++DQRLFLL+RK+
Sbjct: 121 LLRGDPSTAASFELDQRLFLLMRKV 145


>ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Brachypodium distachyon]
          Length = 146

 Score =  142 bits (357), Expect = 4e-31
 Identities = 72/146 (49%), Positives = 105/146 (71%), Gaps = 4/146 (2%)
 Frame = +1

Query: 154 MAQYHFDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLL 333
           MA++ F++I V   +D +GKK+D+V+RI+ARSE   +YMQLDV + +YPM A +K+ M+L
Sbjct: 1   MAEHLFEDIFVVNRIDPDGKKFDRVNRIEARSEQFHMYMQLDVATYVYPMHAGDKFTMVL 60

Query: 334 SETLSLDGSAS---FPEGKQKSLADKFEYVMHGLLYKISEEKSKAE-TKVIAYMSFGGLQ 501
           + TL+LDG+     + +  +K+LADK++YVMHG LYKISE+ S  +  KV  Y SFGGL 
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVETYASFGGLL 120

Query: 502 LMLKAPYSKMLRFKVDQRLFLLLRKM 579
           ++LK   S     ++DQRLFLL+RK+
Sbjct: 121 MLLKGDPSSAANLELDQRLFLLMRKV 146


>gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3
           [Aegilops tauschii]
          Length = 220

 Score =  141 bits (355), Expect = 8e-31
 Identities = 71/148 (47%), Positives = 106/148 (71%), Gaps = 6/148 (4%)
 Frame = +1

Query: 154 MAQYHFDEIIVAQDVDVEGKKYDKVSRIDARSESGEIYMQLDVNSEIYPMRAKEKYRMLL 333
           MA++ F++I     +D +GKK+D+V+RI+ARSE  E+YMQLD+ +++YPM   +K+ M+L
Sbjct: 1   MAEHLFEDIFHVTRIDPDGKKFDRVNRIEARSEQLEMYMQLDIATDVYPMHMGDKFTMVL 60

Query: 334 SETLSLDGSAS---FPEGKQKSLADKFEYVMHGLLYKISEE---KSKAETKVIAYMSFGG 495
           + TL+LDG+     + +  +K+LADK++YVMHG LYKISE+   K K  TKV  Y SFGG
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDNSSKDKGPTKVEIYASFGG 120

Query: 496 LQLMLKAPYSKMLRFKVDQRLFLLLRKM 579
           L ++LK   S     ++DQ+LFLL+RK+
Sbjct: 121 LLMLLKGDPSSAANLELDQKLFLLIRKV 148