BLASTX nr result

ID: Rauwolfia21_contig00018575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00018575
         (360 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354256.1| PREDICTED: chromatin structure-remodeling co...    56   4e-06
ref|XP_006354255.1| PREDICTED: chromatin structure-remodeling co...    56   4e-06
ref|XP_004251335.1| PREDICTED: uncharacterized protein LOC101247...    55   7e-06

>ref|XP_006354256.1| PREDICTED: chromatin structure-remodeling complex protein SYD-like
           isoform X2 [Solanum tuberosum]
          Length = 3398

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
 Frame = +1

Query: 25  ESDNSRSMEGEKSQNNPLSEHLEDKRHH----------------LESQASPFRGMQSDSN 156
           E++N+  ME + SQ +P SEH +++R                   ESQAS  RG+ +D  
Sbjct: 356 EAENANLMEDKNSQLDP-SEHADERRPQRKMRMIQDAEMSIQDATESQASALRGVLTDP- 413

Query: 157 ARNVPIGNRDHDAGNSPQQIAMQNQASFVMGATKQMRPDMTSWIGNGYQAETSKASSPTP 336
            ++ P  N ++   N+ +Q+ M  QAS VMG +KQM+PD++   G     E SK S P  
Sbjct: 414 -KSFPPYNHENAPANT-EQLGMFPQASSVMGTSKQMKPDLSGRSG----TEASKVSPPAS 467

Query: 337 VMAH 348
              H
Sbjct: 468 ANTH 471


>ref|XP_006354255.1| PREDICTED: chromatin structure-remodeling complex protein SYD-like
           isoform X1 [Solanum tuberosum]
          Length = 3452

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
 Frame = +1

Query: 25  ESDNSRSMEGEKSQNNPLSEHLEDKRHH----------------LESQASPFRGMQSDSN 156
           E++N+  ME + SQ +P SEH +++R                   ESQAS  RG+ +D  
Sbjct: 356 EAENANLMEDKNSQLDP-SEHADERRPQRKMRMIQDAEMSIQDATESQASALRGVLTDP- 413

Query: 157 ARNVPIGNRDHDAGNSPQQIAMQNQASFVMGATKQMRPDMTSWIGNGYQAETSKASSPTP 336
            ++ P  N ++   N+ +Q+ M  QAS VMG +KQM+PD++   G     E SK S P  
Sbjct: 414 -KSFPPYNHENAPANT-EQLGMFPQASSVMGTSKQMKPDLSGRSG----TEASKVSPPAS 467

Query: 337 VMAH 348
              H
Sbjct: 468 ANTH 471


>ref|XP_004251335.1| PREDICTED: uncharacterized protein LOC101247785 [Solanum
           lycopersicum]
          Length = 3271

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
 Frame = +1

Query: 25  ESDNSRSMEGEKSQNNPLSEHLEDKRHH----------------LESQASPFRGMQSDSN 156
           E++N+  ME +  Q +P SEH +++R                  +ESQAS  RG+ +D  
Sbjct: 356 EAENANLMEDKNGQLDP-SEHADERRPQRKMRMIQDAEMPIQDAIESQASALRGVPTDP- 413

Query: 157 ARNVPIGNRDHDAGNSPQQIAMQNQASFVMGATKQMRPDMTSWIGNGYQAETSKASSPTP 336
            ++ P  N ++   N+ +Q+ M  QAS VMG +KQM+PD++S  G     E SK S    
Sbjct: 414 -KSFPPYNHENAPANT-EQLGMFPQASSVMGTSKQMKPDLSSRSG----TEASKVSPTAS 467

Query: 337 VMAHES 354
              H S
Sbjct: 468 ANTHGS 473


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