BLASTX nr result

ID: Rauwolfia21_contig00018221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00018221
         (711 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]        77   6e-12
gb|EXB59126.1| Splicing factor U2af large subunit B [Morus notab...    62   1e-07
ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...    62   2e-07
emb|CBI17548.3| unnamed protein product [Vitis vinifera]               62   2e-07
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]    62   2e-07
gb|EMJ04963.1| hypothetical protein PRUPE_ppa003118mg [Prunus pe...    60   9e-07
gb|EMJ04962.1| hypothetical protein PRUPE_ppa003118mg [Prunus pe...    60   9e-07

>gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
          Length = 570

 Score = 77.0 bits (188), Expect = 6e-12
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = +1

Query: 142 MADYEGNGGEDLDNYGGSSPQHRTNSHGGVDDYSDSRSQH 261
           M DYEGNGG+DL+NYGGSSPQ R NSHGG DD+SDSRSQH
Sbjct: 1   MPDYEGNGGDDLENYGGSSPQPRINSHGGADDFSDSRSQH 40


>gb|EXB59126.1| Splicing factor U2af large subunit B [Morus notabilis]
          Length = 599

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 31/44 (70%), Positives = 34/44 (77%), Gaps = 4/44 (9%)
 Frame = +1

Query: 142 MADYEGN---GGEDLDNYGG-SSPQHRTNSHGGVDDYSDSRSQH 261
           MADY+G     GED+DNYGG SSPQ R  SHGG DDYSDS+SQH
Sbjct: 1   MADYDGRYEGNGEDVDNYGGVSSPQPRGGSHGGTDDYSDSKSQH 44


>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
           vinifera]
          Length = 568

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 31/38 (81%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
 Frame = +1

Query: 151 YEGNG-GEDLDNYGGSSPQHRTNSHGGVDDYSDSRSQH 261
           YEGNG GEDLDNYG SSPQ R +SHGG DDYSDS+SQH
Sbjct: 8   YEGNGNGEDLDNYG-SSPQPRGSSHGGPDDYSDSKSQH 44


>emb|CBI17548.3| unnamed protein product [Vitis vinifera]
          Length = 196

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 31/38 (81%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
 Frame = +1

Query: 151 YEGNG-GEDLDNYGGSSPQHRTNSHGGVDDYSDSRSQH 261
           YEGNG GEDLDNYG SSPQ R +SHGG DDYSDS+SQH
Sbjct: 8   YEGNGNGEDLDNYG-SSPQPRGSSHGGPDDYSDSKSQH 44


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 31/38 (81%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
 Frame = +1

Query: 151 YEGNG-GEDLDNYGGSSPQHRTNSHGGVDDYSDSRSQH 261
           YEGNG GEDLDNYG SSPQ R +SHGG DDYSDS+SQH
Sbjct: 8   YEGNGNGEDLDNYG-SSPQPRGSSHGGPDDYSDSKSQH 44


>gb|EMJ04963.1| hypothetical protein PRUPE_ppa003118mg [Prunus persica]
          Length = 601

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 30/45 (66%), Positives = 32/45 (71%), Gaps = 5/45 (11%)
 Frame = +1

Query: 142 MADYEGN---GGEDLDNYG--GSSPQHRTNSHGGVDDYSDSRSQH 261
           M DYEG     GED DNYG  GSSPQ R  +HGG DDYSDS+SQH
Sbjct: 1   MTDYEGRYEGNGEDADNYGDGGSSPQPRATNHGGPDDYSDSKSQH 45


>gb|EMJ04962.1| hypothetical protein PRUPE_ppa003118mg [Prunus persica]
          Length = 539

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 30/45 (66%), Positives = 32/45 (71%), Gaps = 5/45 (11%)
 Frame = +1

Query: 142 MADYEGN---GGEDLDNYG--GSSPQHRTNSHGGVDDYSDSRSQH 261
           M DYEG     GED DNYG  GSSPQ R  +HGG DDYSDS+SQH
Sbjct: 1   MTDYEGRYEGNGEDADNYGDGGSSPQPRATNHGGPDDYSDSKSQH 45


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