BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00017870
         (1858 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   376   e-101
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   376   e-101
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub...   365   3e-98
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   365   3e-98
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   362   3e-97
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...   343   1e-91
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              342   2e-91
gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, pu...   341   7e-91
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...   335   3e-89
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...   335   3e-89
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...   335   3e-89
gb|EMJ12114.1| hypothetical protein PRUPE_ppa000278mg [Prunus pe...   335   4e-89
gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise...   330   1e-87
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   328   4e-87
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no...   312   3e-82
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub...   312   3e-82
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me...   303   1e-79
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub...   303   2e-79
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub...   303   2e-79
gb|ESW30448.1| hypothetical protein PHAVU_002G153700g [Phaseolus...   298   7e-78

>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Solanum tuberosum]
          Length = 1233

 Score =  376 bits (966), Expect = e-101
 Identities = 199/372 (53%), Positives = 258/372 (69%), Gaps = 5/372 (1%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDA-SPSKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQ 1680
            L TV++GF  FKKVDILWK+  SPSKS  G+   LYL+VFMSESCD+ KFW+ L DSCLQ
Sbjct: 859  LETVIKGFSAFKKVDILWKELPSPSKSSRGSTGELYLQVFMSESCDRIKFWNALVDSCLQ 918

Query: 1679 IWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAA 1500
            I  +IDWE S+PDD++D+T+ YGID A E FL  L+SA+  TGK +LPEHL+L AD L A
Sbjct: 919  IRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTA 978

Query: 1499 TGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGR 1320
            TGEFV L+AKGL  QRK   V SP  QACFSNPGD  VRAAKM + DNL G+++ L WG+
Sbjct: 979  TGEFVPLSAKGLTLQRKAAGVISPFMQACFSNPGDSFVRAAKMGLSDNLQGSLESLAWGK 1038

Query: 1319 RPPIGTGAQFDIMYSWKGHELTKPMDVYCLLDSH-SQEALKVKLP-KKHHEISAKSLAQH 1146
             P IGTG+ FDI+YS KG+E  +P+DVY LL +H +    KVK+   +   +  KSLA+ 
Sbjct: 1039 TPSIGTGSSFDIIYSGKGYEPAEPIDVYTLLQNHVTSGTPKVKVTLDEDGGMDGKSLARR 1098

Query: 1145 LFKYEDFTATPYKSLMKPMKSLSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFVV 966
            L + +D      KS     K L   +S  DI +LSQ L+ +L KY I   LNE DK   +
Sbjct: 1099 LDRLDDLNKKSCKSEWSITK-LRSFISFNDIKKLSQSLKQMLSKYAIDRELNEADKCIAM 1157

Query: 965  IALCFHPRKSDKIGTGI-TDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQQF 789
            +AL FHPR+++KIG G   +IK+G H ++E+SRCF+L R DG++EDFSY KC+ +AL+  
Sbjct: 1158 MALQFHPRRNEKIGKGAPQEIKIGYHKEYEDSRCFMLVRSDGSVEDFSYRKCMQHALELI 1217

Query: 788  NRDRAK-AKWLN 756
               +AK ++WLN
Sbjct: 1218 APQKAKTSRWLN 1229


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Solanum tuberosum]
          Length = 1446

 Score =  376 bits (966), Expect = e-101
 Identities = 199/372 (53%), Positives = 258/372 (69%), Gaps = 5/372 (1%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDA-SPSKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQ 1680
            L TV++GF  FKKVDILWK+  SPSKS  G+   LYL+VFMSESCD+ KFW+ L DSCLQ
Sbjct: 1072 LETVIKGFSAFKKVDILWKELPSPSKSSRGSTGELYLQVFMSESCDRIKFWNALVDSCLQ 1131

Query: 1679 IWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAA 1500
            I  +IDWE S+PDD++D+T+ YGID A E FL  L+SA+  TGK +LPEHL+L AD L A
Sbjct: 1132 IRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTA 1191

Query: 1499 TGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGR 1320
            TGEFV L+AKGL  QRK   V SP  QACFSNPGD  VRAAKM + DNL G+++ L WG+
Sbjct: 1192 TGEFVPLSAKGLTLQRKAAGVISPFMQACFSNPGDSFVRAAKMGLSDNLQGSLESLAWGK 1251

Query: 1319 RPPIGTGAQFDIMYSWKGHELTKPMDVYCLLDSH-SQEALKVKLP-KKHHEISAKSLAQH 1146
             P IGTG+ FDI+YS KG+E  +P+DVY LL +H +    KVK+   +   +  KSLA+ 
Sbjct: 1252 TPSIGTGSSFDIIYSGKGYEPAEPIDVYTLLQNHVTSGTPKVKVTLDEDGGMDGKSLARR 1311

Query: 1145 LFKYEDFTATPYKSLMKPMKSLSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFVV 966
            L + +D      KS     K L   +S  DI +LSQ L+ +L KY I   LNE DK   +
Sbjct: 1312 LDRLDDLNKKSCKSEWSITK-LRSFISFNDIKKLSQSLKQMLSKYAIDRELNEADKCIAM 1370

Query: 965  IALCFHPRKSDKIGTGI-TDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQQF 789
            +AL FHPR+++KIG G   +IK+G H ++E+SRCF+L R DG++EDFSY KC+ +AL+  
Sbjct: 1371 MALQFHPRRNEKIGKGAPQEIKIGYHKEYEDSRCFMLVRSDGSVEDFSYRKCMQHALELI 1430

Query: 788  NRDRAK-AKWLN 756
               +AK ++WLN
Sbjct: 1431 APQKAKTSRWLN 1442


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
            lycopersicum]
          Length = 1446

 Score =  365 bits (938), Expect = 3e-98
 Identities = 196/375 (52%), Positives = 253/375 (67%), Gaps = 6/375 (1%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDA-SPSKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQ 1680
            L TV++GF  FKKVDILWK+  SPSKS  G    LYL+VFMSESCD+ KFW+ L DSCLQ
Sbjct: 1072 LETVIKGFSAFKKVDILWKELPSPSKSSRGPTGELYLQVFMSESCDRIKFWNALVDSCLQ 1131

Query: 1679 IWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAA 1500
            I  +IDWE S+PDD++D+T+ YGID A E FL  L+SA+  TGK +LPEHL+L AD L  
Sbjct: 1132 IRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTT 1191

Query: 1499 TGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGR 1320
            TGEFV L+AKGL  QRK   V SP  QACF+NPGD  VRAAKM + D+L G+++ L WG+
Sbjct: 1192 TGEFVPLSAKGLTLQRKAAGVVSPFMQACFTNPGDSFVRAAKMGLSDDLQGSLESLAWGK 1251

Query: 1319 RPPIGTGAQFDIMYSWKGHELTKPMDVYCLLD---SHSQEALKVKLPKKHHEISAKSLAQ 1149
             P IGTG+ FDIMYS KG+EL + ++VY LL    +     +KV L  K   +   SL +
Sbjct: 1252 TPSIGTGSSFDIMYSGKGYELAEQINVYTLLRNLVTVDTPNVKVTL-GKDGGMDGMSLVR 1310

Query: 1148 HLFKYEDFTATPYKSLMKPMKSLSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFV 969
             L + +D      KS +   K L    S  DI +LSQ L+ +L KYDIG  LNE DK   
Sbjct: 1311 RLDRLDDLDKKSCKSELSFTK-LRSYFSFNDIKKLSQSLKQMLSKYDIGRELNEADKCLA 1369

Query: 968  VIALCFHPRKSDKIGTGI-TDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQQ 792
            ++AL FHPR+++KIG G   +IK+G H + E SRCF++ R D T+EDFSY KC+ +AL+ 
Sbjct: 1370 MMALQFHPRRNEKIGKGAPKEIKIGYHQEFEGSRCFMVVRSDDTVEDFSYRKCMQHALEL 1429

Query: 791  FNRDRAK-AKWLNGS 750
                +AK ++WLNG+
Sbjct: 1430 IAPQKAKTSRWLNGA 1444


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  365 bits (938), Expect = 3e-98
 Identities = 196/375 (52%), Positives = 253/375 (67%), Gaps = 6/375 (1%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDA-SPSKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQ 1680
            L TV++GF  FKKVDILWK+  SPSKS  G    LYL+VFMSESCD+ KFW+ L DSCLQ
Sbjct: 764  LETVIKGFSAFKKVDILWKELPSPSKSSRGPTGELYLQVFMSESCDRIKFWNALVDSCLQ 823

Query: 1679 IWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAA 1500
            I  +IDWE S+PDD++D+T+ YGID A E FL  L+SA+  TGK +LPEHL+L AD L  
Sbjct: 824  IRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADSLTT 883

Query: 1499 TGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGR 1320
            TGEFV L+AKGL  QRK   V SP  QACF+NPGD  VRAAKM + D+L G+++ L WG+
Sbjct: 884  TGEFVPLSAKGLTLQRKAAGVVSPFMQACFTNPGDSFVRAAKMGLSDDLQGSLESLAWGK 943

Query: 1319 RPPIGTGAQFDIMYSWKGHELTKPMDVYCLLD---SHSQEALKVKLPKKHHEISAKSLAQ 1149
             P IGTG+ FDIMYS KG+EL + ++VY LL    +     +KV L  K   +   SL +
Sbjct: 944  TPSIGTGSSFDIMYSGKGYELAEQINVYTLLRNLVTVDTPNVKVTL-GKDGGMDGMSLVR 1002

Query: 1148 HLFKYEDFTATPYKSLMKPMKSLSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFV 969
             L + +D      KS +   K L    S  DI +LSQ L+ +L KYDIG  LNE DK   
Sbjct: 1003 RLDRLDDLDKKSCKSELSFTK-LRSYFSFNDIKKLSQSLKQMLSKYDIGRELNEADKCLA 1061

Query: 968  VIALCFHPRKSDKIGTGI-TDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQQ 792
            ++AL FHPR+++KIG G   +IK+G H + E SRCF++ R D T+EDFSY KC+ +AL+ 
Sbjct: 1062 MMALQFHPRRNEKIGKGAPKEIKIGYHQEFEGSRCFMVVRSDDTVEDFSYRKCMQHALEL 1121

Query: 791  FNRDRAK-AKWLNGS 750
                +AK ++WLNG+
Sbjct: 1122 IAPQKAKTSRWLNGA 1136


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  362 bits (929), Expect = 3e-97
 Identities = 187/380 (49%), Positives = 255/380 (67%), Gaps = 7/380 (1%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDASPSKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQI 1677
            L  V++G  + KKVDILW D   S     +   LYLRV++S  C K  FW +L D+CLQI
Sbjct: 1114 LGAVVKGLLDVKKVDILWNDNPDSDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQI 1173

Query: 1676 WPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAAT 1497
              MIDWE SHPD+I+D+ + YGIDA  + FL+SL SAI   GK+VLPEHL+L A CL+AT
Sbjct: 1174 MDMIDWERSHPDNIHDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSAT 1233

Query: 1496 GEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGRR 1317
            GEFV LNAKG+A+Q++ T+++SP  Q CFS+PG C ++A K  + DNL G++D L WG+ 
Sbjct: 1234 GEFVGLNAKGMARQKELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKI 1293

Query: 1316 PPIGTGAQFDIMYSWKGHELTKPMDVYCLLDSHS---QEALKVKLPKKHHEISAKSLAQH 1146
            P +G+G  FDI+YS KGHEL +P D+Y LL S +   ++ LKVK+P   ++ + K  AQ 
Sbjct: 1294 PSVGSGGHFDILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQL 1353

Query: 1145 LFKYEDFTATPYKSLMKPMKS-LSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFV 969
            ++   D  +   KSL K  KS L   LS  DI +LS++L+ +L KY I  +L+E DK  +
Sbjct: 1354 VYANGDSASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTL 1413

Query: 968  VIALCFHPRKSDKIGTGITDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQQF 789
            ++AL FHPR+ +KIG G  +IKV  H+K+ N+RCF L R DGT EDFSYHKCVH AL+  
Sbjct: 1414 MMALYFHPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEII 1473

Query: 788  NRDRAK---AKWLNGSQTQT 738
            +  RA+   ++WL    + T
Sbjct: 1474 DPRRARSYQSRWLTSEVSST 1493


>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score =  343 bits (881), Expect = 1e-91
 Identities = 181/356 (50%), Positives = 237/356 (66%), Gaps = 7/356 (1%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDASP----SKSCGGTPNGLYLRVFMSESCDKPKFWSILADS 1689
            LRTV++GFPEFKKVDILWKD       SK   G P   Y+RVFMSE+C++ +FW+IL + 
Sbjct: 760  LRTVVKGFPEFKKVDILWKDEQSRSRFSKCSSGEP---YVRVFMSENCERARFWNILVEK 816

Query: 1688 CLQIWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADC 1509
             L+I  +IDW+ SHPDD++D    +GID A   F++SLNSAI  TGK++LPEHLI TA+C
Sbjct: 817  SLRIRSLIDWDRSHPDDVHDYGEAFGIDTAWMCFVNSLNSAISETGKTILPEHLIATANC 876

Query: 1508 LAATGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLT 1329
            L+ TGEFV+LNAKGLAQQRKE  + SP  QACFSNP DC ++AAKM  +DNL G+VD L 
Sbjct: 877  LSMTGEFVSLNAKGLAQQRKEATINSPFVQACFSNPSDCFIKAAKMGQMDNLQGSVDSLA 936

Query: 1328 WGRRPPIGTGAQFDIMYSWKGHELTKPMDVYCLLDSH---SQEALKVKLPKKHHEISAKS 1158
            WG+ PPIGTG QFDI+YS KGHE +KP DVY LL+S    ++ + K+KLP +    + +S
Sbjct: 937  WGQTPPIGTGGQFDIIYSGKGHEPSKPTDVYSLLNSQVGFAKPSEKIKLPVQFTSGNDQS 996

Query: 1157 LAQHLFKYEDFTATPYKSLMKPMKSLSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDK 978
                    ++      K  +  MKSL    +  +I E+S  L+ +LH+Y    +L  EDK
Sbjct: 997  --------QNLKTNGRKRFLAGMKSLRS--AEDEIREVSLALKRMLHEYASDCQLRGEDK 1046

Query: 977  PFVVIALCFHPRKSDKIGTGITDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCV 810
               + AL +HPR  +K G G  +IKVG H  H+ SRCF + + DGT ED SY K +
Sbjct: 1047 TLALRALQYHPRWEEKTGAGTVEIKVGRHPDHKESRCFFVVKTDGTEEDISYRKSI 1102


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  342 bits (878), Expect = 2e-91
 Identities = 179/359 (49%), Positives = 245/359 (68%), Gaps = 7/359 (1%)
 Frame = -3

Query: 1802 KDASPSKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQIWPMIDWEWSHPDDINDMT 1623
            K++   KS  G    LYLRV++S  C K  FW +L D+CLQI  MIDWE SHPD+I+D+ 
Sbjct: 993  KNSDVLKSSSGR---LYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIF 1049

Query: 1622 LGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAATGEFVTLNAKGLAQQRKET 1443
            + YGIDA  + FL+SL SAI   GK+VLPEHL+L A CL+ATGEFV LNAKG+A+Q++ T
Sbjct: 1050 VVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELT 1109

Query: 1442 AVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGRRPPIGTGAQFDIMYSWKGH 1263
            +++SP  Q CFS+PG C ++A K  + DNL G++D L WG+ P +G+G  FDI+YS KGH
Sbjct: 1110 SISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGH 1169

Query: 1262 ELTKPMDVYCLLDSHS---QEALKVKLPKKHHEISAKSLAQHLFKYEDFTATPYKSLMKP 1092
            EL +P D+Y LL S +   ++ LKVK+P   ++ + K  AQ ++   D  +   KSL K 
Sbjct: 1170 ELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKI 1229

Query: 1091 MKS-LSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFVVIALCFHPRKSDKIGTGI 915
             KS L   LS  DI +LS++L+ +L KY I  +L+E DK  +++AL FHPR+ +KIG G 
Sbjct: 1230 SKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGA 1289

Query: 914  TDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQQFNRDRAK---AKWLNGSQ 747
             +IKV  H+K+ N+RCF L R DGT EDFSYHKCVH AL+  +  RA+   ++WL  S+
Sbjct: 1290 QNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSRWLPYSE 1348


>gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao]
          Length = 1484

 Score =  341 bits (874), Expect = 7e-91
 Identities = 189/377 (50%), Positives = 244/377 (64%), Gaps = 11/377 (2%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKD----ASPSKSCGGTPNGLYLRVFMSESCDKPKFWSILADS 1689
            L  V++GFPE KKVDILWKD    + P KS  G    LYLRVF+S      K W +L + 
Sbjct: 1106 LEAVIKGFPEIKKVDILWKDRLKVSKPHKSSCGE---LYLRVFVSGDFGITKLWGVLMND 1162

Query: 1688 CLQIWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADC 1509
            CLQI  MIDW  SHPD+IN + L YGIDA  + FL++L SAI  TGK++L EHL++ A+C
Sbjct: 1163 CLQIMDMIDWTRSHPDNINQLCLAYGIDAGWKFFLNNLKSAISDTGKTILNEHLLVVANC 1222

Query: 1508 LAATGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLT 1329
            L+ATGEFV LN+KGL QQR+   V+SP  QACFSNP    V+AAK    D+L GT+D L 
Sbjct: 1223 LSATGEFVGLNSKGLRQQREHAYVSSPFMQACFSNPSASFVKAAKTGASDDLQGTIDALA 1282

Query: 1328 WGRRPPIGTGAQFDIMYSWKGHELTKPMDVYCLLD---SHSQEALKVKLPKKHHEISAKS 1158
            WGR P IGTG QFDI+YS K   L +P+DVY LL    S  ++ ++ ++PK  +  S K 
Sbjct: 1283 WGRIPHIGTGGQFDIIYSVKDQRLAEPVDVYKLLGSSISSQKQDVEFEVPKALNFKSEKY 1342

Query: 1157 LAQHLFKYEDFTATPYKSLMKPMKSL-SELLSGKDILELSQKLRNLLHKYDIGSRLNEED 981
             +  +    D  +   K +    +S+  ELL+  DI  LS+ LRN+LHKY I  RL+E D
Sbjct: 1343 GSLLIDALGDSASEELKKIETKRRSIWRELLTLDDIQRLSRALRNILHKYPIDHRLSEAD 1402

Query: 980  KPFVVIALCFHPRKSDKIGTGITDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNA 801
               +++AL FHPR+ +KIG+G  +IKVG H +H N+RCF L R DGT+ DFSYHKCV  A
Sbjct: 1403 WNTLMMALYFHPRRDEKIGSGAQEIKVGYHPEHANARCFSLVRTDGTIVDFSYHKCVLGA 1462

Query: 800  LQQFNRDRA---KAKWL 759
            L+     RA   K+KWL
Sbjct: 1463 LEIIAPHRAKSYKSKWL 1479


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
            isoform X3 [Citrus sinensis]
            gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1-like isoform X4 [Citrus
            sinensis]
          Length = 1443

 Score =  335 bits (860), Expect = 3e-89
 Identities = 184/372 (49%), Positives = 247/372 (66%), Gaps = 7/372 (1%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDASP-SKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQ 1680
            L+TV++GF E KKVDILWKD    SKS   +   LYLRV MS  C     WS L + C Q
Sbjct: 1068 LKTVVKGFREIKKVDILWKDKQKASKSHDDSFGELYLRVSMSGQCHITSLWSALMNDCHQ 1127

Query: 1679 IWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAA 1500
            I  MIDW  SHPD+I    L YGIDA  + FL++L SAI  TGK++LPEHL++ A+ L+A
Sbjct: 1128 IMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFLTNLESAISDTGKNILPEHLLIVANTLSA 1187

Query: 1499 TGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGR 1320
            TGEFV LNAKGLA QRK ++V+SP  QA FSNPG   ++AAK   VDNL G+VD L WG+
Sbjct: 1188 TGEFVGLNAKGLALQRKHSSVSSPFVQAFFSNPGASFIKAAKAGAVDNLQGSVDALGWGK 1247

Query: 1319 RPPIGTGAQFDIMYSWKGHELTKPMDVYCLLDS--HSQEALKVKLPKKHHEISAKSLAQH 1146
             P +GTG  FDI+YS +G  L+KP+DVY LL +   S++  K+K+ K    IS K  A+ 
Sbjct: 1248 VPSVGTGGHFDIIYSGEGRTLSKPVDVYNLLSTPVSSKQNEKLKVCKAQGLISDKCGAKF 1307

Query: 1145 -LFKYEDFTATPYKSLMKPMKSLSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFV 969
              F ++      ++++ + +  L +  +  D+L LS  L+ +LHKY IG RL+E+DK  V
Sbjct: 1308 GDFAFKGLGNLDFETISRGV--LRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTV 1365

Query: 968  VIALCFHPRKSDKIGTGITDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQQF 789
            + AL FHPR+++K+G    DI+V  H +H+NSRCF L R+DG++EDFSYHKCV  AL+  
Sbjct: 1366 IRALYFHPRRNEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYHKCVIGALEII 1425

Query: 788  NRDRA---KAKW 762
              ++A   +AKW
Sbjct: 1426 APEKAEIYRAKW 1437


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Citrus sinensis]
          Length = 1481

 Score =  335 bits (860), Expect = 3e-89
 Identities = 184/372 (49%), Positives = 247/372 (66%), Gaps = 7/372 (1%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDASP-SKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQ 1680
            L+TV++GF E KKVDILWKD    SKS   +   LYLRV MS  C     WS L + C Q
Sbjct: 1106 LKTVVKGFREIKKVDILWKDKQKASKSHDDSFGELYLRVSMSGQCHITSLWSALMNDCHQ 1165

Query: 1679 IWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAA 1500
            I  MIDW  SHPD+I    L YGIDA  + FL++L SAI  TGK++LPEHL++ A+ L+A
Sbjct: 1166 IMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFLTNLESAISDTGKNILPEHLLIVANTLSA 1225

Query: 1499 TGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGR 1320
            TGEFV LNAKGLA QRK ++V+SP  QA FSNPG   ++AAK   VDNL G+VD L WG+
Sbjct: 1226 TGEFVGLNAKGLALQRKHSSVSSPFVQAFFSNPGASFIKAAKAGAVDNLQGSVDALGWGK 1285

Query: 1319 RPPIGTGAQFDIMYSWKGHELTKPMDVYCLLDS--HSQEALKVKLPKKHHEISAKSLAQH 1146
             P +GTG  FDI+YS +G  L+KP+DVY LL +   S++  K+K+ K    IS K  A+ 
Sbjct: 1286 VPSVGTGGHFDIIYSGEGRTLSKPVDVYNLLSTPVSSKQNEKLKVCKAQGLISDKCGAKF 1345

Query: 1145 -LFKYEDFTATPYKSLMKPMKSLSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFV 969
              F ++      ++++ + +  L +  +  D+L LS  L+ +LHKY IG RL+E+DK  V
Sbjct: 1346 GDFAFKGLGNLDFETISRGV--LRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTV 1403

Query: 968  VIALCFHPRKSDKIGTGITDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQQF 789
            + AL FHPR+++K+G    DI+V  H +H+NSRCF L R+DG++EDFSYHKCV  AL+  
Sbjct: 1404 IRALYFHPRRNEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYHKCVIGALEII 1463

Query: 788  NRDRA---KAKW 762
              ++A   +AKW
Sbjct: 1464 APEKAEIYRAKW 1475


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
            gi|557542783|gb|ESR53761.1| hypothetical protein
            CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score =  335 bits (860), Expect = 3e-89
 Identities = 184/372 (49%), Positives = 247/372 (66%), Gaps = 7/372 (1%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDASP-SKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQ 1680
            L+TV++GF E KKVDILWKD    SKS   +   LYLRV MS  C     WS L + C Q
Sbjct: 1068 LKTVVKGFREIKKVDILWKDKQKASKSHDDSFGELYLRVSMSGQCHITSLWSALMNDCHQ 1127

Query: 1679 IWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAA 1500
            I  MIDW  SHPD+I    L YGIDA  + FL++L SAI  TGK++LPEHL++ A+ L+A
Sbjct: 1128 IMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFLTNLESAISDTGKNILPEHLLIVANTLSA 1187

Query: 1499 TGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGR 1320
            TGEFV LNAKGLA QRK ++V+SP  QA FSNPG   ++AAK   VDNL G+VD L WG+
Sbjct: 1188 TGEFVGLNAKGLALQRKHSSVSSPFVQAFFSNPGASFIKAAKAGAVDNLQGSVDALGWGK 1247

Query: 1319 RPPIGTGAQFDIMYSWKGHELTKPMDVYCLLDS--HSQEALKVKLPKKHHEISAKSLAQH 1146
             P +GTG  FDI+YS +G  L+KP+DVY LL +   S++  K+K+ K    IS K  A+ 
Sbjct: 1248 VPSVGTGGHFDIIYSGEGRTLSKPVDVYNLLSTPVSSKQNEKLKVCKAQGLISDKCGAKF 1307

Query: 1145 -LFKYEDFTATPYKSLMKPMKSLSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFV 969
              F ++      ++++ + +  L +  +  D+L LS  L+ +LHKY IG RL+E+DK  V
Sbjct: 1308 GDFAFKGLGNLDFETISRGV--LRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTV 1365

Query: 968  VIALCFHPRKSDKIGTGITDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQQF 789
            + AL FHPR+++K+G    DI+V  H +H+NSRCF L R+DG++EDFSYHKCV  AL+  
Sbjct: 1366 IRALYFHPRRNEKLGIEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYHKCVIGALEII 1425

Query: 788  NRDRA---KAKW 762
              ++A   +AKW
Sbjct: 1426 APEKAEIYRAKW 1437


>gb|EMJ12114.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
          Length = 1356

 Score =  335 bits (859), Expect = 4e-89
 Identities = 182/372 (48%), Positives = 244/372 (65%), Gaps = 5/372 (1%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKD-ASPSKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQ 1680
            L TV++GF E KKVDILW D    SK   G+   LYLRV MS    + + WS+L D+CLQ
Sbjct: 988  LGTVVKGFLEVKKVDILWNDHPRESKKIHGSSGELYLRVSMSGKTGRRRLWSMLMDNCLQ 1047

Query: 1679 IWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAA 1500
            I  +IDW  SHPD+++D  + YGIDA  + FL++L +A    GK +LP+HLIL ADCL+A
Sbjct: 1048 IMDLIDWSRSHPDNVHDYCIAYGIDAGWKYFLNNLETAANDIGKDILPQHLILVADCLSA 1107

Query: 1499 TGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGR 1320
            TGEFV LNAKG+AQQ+  T+V+SP  QACFS+PG C ++AAK  +VD L G+V+ L WG 
Sbjct: 1108 TGEFVGLNAKGIAQQKGHTSVSSPFVQACFSSPGACFIKAAKGGVVDELHGSVEALAWGN 1167

Query: 1319 RPPIGTGAQFDIMYSWKGHELTKPMDVYCLLDSHSQEALKVKLPKKHHEISAKSLAQHLF 1140
             PP GTG QFDI+YS +G  L+KP++ Y LL S      ++   +++   ++K+    L 
Sbjct: 1168 TPPSGTGRQFDILYSKEGLNLSKPLNPYDLLGS------QISSSRENAFETSKAWNNTLD 1221

Query: 1139 KYEDFTATPYKSLMKPMKS-LSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFVVI 963
            K  D T+   +      KS + + L+  DI + +Q L+ +L KYDI   L E DK  + +
Sbjct: 1222 KC-DVTSIGLEKSESVFKSVIRKYLTINDIQKWTQTLKRILRKYDINESLTEGDKSILKM 1280

Query: 962  ALCFHPRKSDKIGTGITDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQQFNR 783
            AL FHP K DK+G+G+ DIKVG H KHEN+RCF+L R D T EDFSYHKCV  AL+    
Sbjct: 1281 ALHFHPHKVDKMGSGVQDIKVGQHPKHENARCFMLVRIDRTEEDFSYHKCVLGALEIVAP 1340

Query: 782  DRAK---AKWLN 756
            +RAK   +KW+N
Sbjct: 1341 ERAKSYRSKWMN 1352


>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
          Length = 1380

 Score =  330 bits (847), Expect = 1e-87
 Identities = 179/355 (50%), Positives = 235/355 (66%), Gaps = 1/355 (0%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDA-SPSKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQ 1680
            L+TV++GFPEFKKVDILWKD  +  K    T   L++RV MSE CD  KFWS L DSCL+
Sbjct: 1028 LKTVIKGFPEFKKVDILWKDEPNHEKVARRTSGELFIRVSMSEYCDPNKFWSNLVDSCLR 1087

Query: 1679 IWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAA 1500
            I  +IDWE S PDDI D +  +GI +A + F+ +L+S+I  TGK++LPEHLI+TA+CL+A
Sbjct: 1088 IRNLIDWERSLPDDILDYSNAFGISSAWQSFVKNLHSSIIDTGKTILPEHLIVTANCLSA 1147

Query: 1499 TGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGR 1320
            TGEFV LNAKGL  QRKE  + SP NQA F NP D  V+AAK    D+L G+V+ L+WG+
Sbjct: 1148 TGEFVALNAKGLVNQRKEIDIRSPFNQATFLNPSDTFVKAAKACQTDDLVGSVEALSWGQ 1207

Query: 1319 RPPIGTGAQFDIMYSWKGHELTKPMDVYCLLDSHSQEALKVKLPKKHHEISAKSLAQHLF 1140
             P IGTG QFD++Y  KGHE  K  DVY LL SH   A   K   K   +S KS      
Sbjct: 1208 TPRIGTGCQFDLIYKGKGHETAKNEDVYGLLISHDGRA---KSNVKERSLSMKSSN---- 1260

Query: 1139 KYEDFTATPYKSLMKPMKSLSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFVVIA 960
                     +KS ++ + +    LS   I ++SQKL+ +L +Y +  +L+ EDK   + A
Sbjct: 1261 PLHGINTQQHKSWLERLSANMNHLSVLGIKKISQKLKRILKEYPMDRQLSGEDKSTALTA 1320

Query: 959  LCFHPRKSDKIGTGITDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQ 795
            L FHPR  +KIG+GI +IKVG H +H+ + CFIL+R DGT EDFSY KC+++AL+
Sbjct: 1321 LQFHPRWPEKIGSGIQEIKVGLHPEHQQT-CFILKRSDGTEEDFSYRKCINHALE 1374


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  328 bits (842), Expect = 4e-87
 Identities = 180/373 (48%), Positives = 236/373 (63%), Gaps = 7/373 (1%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDASPSKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQI 1677
            L TV+RGF E  +VDI W D         +   LYLRV MS   +  +FW+ L ++CL I
Sbjct: 1094 LGTVIRGFTEIDRVDITWNDRPKVPKPRCSHGELYLRVTMSGEGNS-RFWATLMNNCLPI 1152

Query: 1676 WPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAAT 1497
              +IDW  SHPD+ + + L YGID+  + FL+SL SA    GK++  EHL+L ++ L+AT
Sbjct: 1153 MDLIDWTRSHPDNTHSLCLAYGIDSGWKYFLNSLESATLDVGKTIRLEHLLLVSNSLSAT 1212

Query: 1496 GEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGRR 1317
            GEFV LN KGL  QR+   V +P  QACFS+PG C+++AAK  I DNL G++D L WGR 
Sbjct: 1213 GEFVGLNVKGLTHQREHALVKTPFMQACFSSPGACMIKAAKAGIKDNLSGSLDALAWGRM 1272

Query: 1316 PPIGTGAQFDIMYSWKGHELTKPMDVYCLLDSHS---QEALKVKLPKKHHEISAKSLAQH 1146
            P +GTG QFDI+YS KGHEL KP+DVY LL   S   ++  K++   K + IS K  AQ 
Sbjct: 1273 PSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNTKIESLDK-NTISEKYSAQL 1331

Query: 1145 LFKYEDFTATPYKSLMKPMKS-LSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFV 969
            + K    T    K L    KS L + L+  DI +LS  LR +LHKY +  RLNE DK  +
Sbjct: 1332 MLKNGGSTIKGLKRLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTL 1391

Query: 968  VIALCFHPRKSDKIGTGITDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQQF 789
            ++AL FHP + +KIG G  DIKVG H+K++N+RCF+L R DGT EDFSYHKCV  AL+  
Sbjct: 1392 MMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEII 1451

Query: 788  NRDRAK---AKWL 759
               R K   +KW+
Sbjct: 1452 APHRVKGYQSKWM 1464


>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
          Length = 1410

 Score =  312 bits (800), Expect = 3e-82
 Identities = 164/358 (45%), Positives = 226/358 (63%), Gaps = 4/358 (1%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDAS-PSKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQ 1680
            L T+++GF E +KVDILW D S  SK+   +   LYL+V MS       +WS L + CL+
Sbjct: 1024 LETIVKGFREIEKVDILWSDRSNTSKATRDSSGELYLKVSMSGDSGVKSYWSTLMNDCLR 1083

Query: 1679 IWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAA 1500
            I  +IDW  SHP+++N+    YGID+  + FL++L SA+   GK++LPEHL+L A+ L+ 
Sbjct: 1084 IMDLIDWSRSHPENVNEFCSVYGIDSGWKFFLNNLESAVSDVGKTILPEHLLLVANTLSV 1143

Query: 1499 TGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGR 1320
            TG FV L  KGLA+QR+  +VA+P +QACFSNP  C ++AAK  + D L GT+D L WG 
Sbjct: 1144 TGNFVGLTPKGLARQREHASVATPFSQACFSNPAACFIKAAKAEVTDGLHGTLDALAWGN 1203

Query: 1319 RPPIGTGAQFDIMYSWKGHELTKPMDVYCLLD---SHSQEALKVKLPKKHHEISAKSLAQ 1149
             PP+GTG QF++++S KGHE+ KP++VY +L    S   + +      K+H  S K  A 
Sbjct: 1204 IPPLGTGGQFELVFSGKGHEVDKPINVYDMLATGISPDVQGVNETPDAKNHR-SVKFGA- 1261

Query: 1148 HLFKYEDFTATPYKSLMKPMKSLSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFV 969
             L  Y+   +   K L      + +L    DI  LS  L  +L+KY I   L+ +DK  +
Sbjct: 1262 -LLLYDKSVSQGLKKLGISKDRIKKLFKLDDIWILSNALAKILNKYPINQSLDHKDKSTL 1320

Query: 968  VIALCFHPRKSDKIGTGITDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQ 795
            +IAL FHPR  +KIGTG  DIKV  H KH++SRCF+L R DGT+EDFSY KCV  AL+
Sbjct: 1321 MIALYFHPRIDEKIGTGFQDIKVAYHPKHQSSRCFVLVRADGTVEDFSYRKCVLGALE 1378


>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1438

 Score =  312 bits (800), Expect = 3e-82
 Identities = 171/367 (46%), Positives = 235/367 (64%), Gaps = 5/367 (1%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDASPSKSCGGTPNGLYLRVFMSESCDK-PKFWSILADSCLQ 1680
            L+TV++GF E KKVDILW D        G+   L LRV MS    K    W++L D C+ 
Sbjct: 1073 LKTVVKGFLEIKKVDILWIDRP------GSSGELCLRVSMSGKTRKGTTLWNMLMDDCIP 1126

Query: 1679 IWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAA 1500
            +  MIDW  SHPD+++D+   YGID  ++ FL+ L SA    GK++LP+HL+L ADCL+A
Sbjct: 1127 VMDMIDWSRSHPDNVHDICTAYGIDVGQKHFLNKLESATKDVGKTILPQHLLLVADCLSA 1186

Query: 1499 TGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGR 1320
            TGEFV+LNAKG+ QQ +  +V +P  QACFS PG CLV+AAK+ +VDNL G++D LTWG 
Sbjct: 1187 TGEFVSLNAKGIGQQLEHASVIAPFMQACFSTPGPCLVKAAKVGVVDNLQGSLDALTWGN 1246

Query: 1319 RPPIGTGAQFDIMYSWKGHELTKPMDVYCLLDS----HSQEALKVKLPKKHHEISAKSLA 1152
             P +G+G QFDI++S KG   +KP+ VY LL S    + Q   ++     H  +S K +A
Sbjct: 1247 TPSLGSGGQFDIIFS-KGPVSSKPIKVYDLLSSQIITNPQNGFEMSDAPIH--LSDKFVA 1303

Query: 1151 QHLFKYEDFTATPYKSLMKPMKSLSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPF 972
             ++  Y++     ++S+ K +  L E L+ +DI  LSQ L+N+L KYD+  R+N+ DK  
Sbjct: 1304 PNM--YKNGYLRKWESITKSV--LRENLTIQDIDRLSQALKNILQKYDVNERINDMDKQV 1359

Query: 971  VVIALCFHPRKSDKIGTGITDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQQ 792
            +++ L FHP    KIG GI ++KVG H  HEN RCF+L R DGT+ED SYHKC+  A   
Sbjct: 1360 LMMVLRFHPHGDRKIGLGIKEVKVGHHPDHENVRCFMLVRTDGTIEDVSYHKCICGAYDI 1419

Query: 791  FNRDRAK 771
                RAK
Sbjct: 1420 IAPHRAK 1426


>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1687

 Score =  303 bits (777), Expect = 1e-79
 Identities = 168/365 (46%), Positives = 231/365 (63%), Gaps = 3/365 (0%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDASP-SKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQ 1680
            L+T ++GF E KKVDILWKD    +KS  G+   LYLRV MS   D   FW  L + C +
Sbjct: 1266 LQTAIKGFLEIKKVDILWKDLPKVTKSYNGSAGELYLRVTMSSGNDNGTFWGRLINHCHR 1325

Query: 1679 IWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAA 1500
            I P+IDW  SHPD+I+     +GIDA  + +  +L+SA   TGKS+LP+HL L A+ L+A
Sbjct: 1326 IMPLIDWTRSHPDNIHHFCSAFGIDAGWQHYFHNLSSATSDTGKSILPKHLRLVANSLSA 1385

Query: 1499 TGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGR 1320
            +GEFV LNAKG+A+QRK  +V+SP  QACFSNPG   ++AAK  IVDNL G +D L WG 
Sbjct: 1386 SGEFVGLNAKGMARQRKHASVSSPFVQACFSNPGSSFLKAAKSGIVDNLQGNLDALAWGN 1445

Query: 1319 RPPIGTGAQFDIMYSWKGHELTKPMDVYCLLD-SHSQEALKVKLPKKHHEISAKSLAQHL 1143
              P+GTG QFDI+YS K  E+ K +DVY LL+ S +Q   ++ +P+     S K  +   
Sbjct: 1446 CLPMGTGGQFDIIYSEKVEEINKSVDVYGLLETSFNQMDQEINIPQSRKYSSGKCSSD-- 1503

Query: 1142 FKYEDFTATPYKSLMKPMKS-LSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFVV 966
            F+ ++   TP +   K  KS L   ++  DI  L+   R +L+KY I   L+E DK  ++
Sbjct: 1504 FRSKNGGYTPKEP--KQWKSVLRNFMTANDIQRLTFDARVILNKYQIDETLSETDKLTIM 1561

Query: 965  IALCFHPRKSDKIGTGITDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQQFN 786
              L FHPR+ +K G+G  +IKVG H +  +SRCF + RKDG++EDFSY KC+  AL   +
Sbjct: 1562 KVLHFHPRRDEKFGSGPQNIKVGWHPEFTDSRCFFIIRKDGSVEDFSYRKCILGALDIID 1621

Query: 785  RDRAK 771
              ++K
Sbjct: 1622 PKKSK 1626


>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
            [Cicer arietinum]
          Length = 1474

 Score =  303 bits (775), Expect = 2e-79
 Identities = 171/378 (45%), Positives = 235/378 (62%), Gaps = 6/378 (1%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDASP-SKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQ 1680
            LRT ++G  E KKVDILWKD S  SKS  G+   LYLRV MS   D+  FW  L + C +
Sbjct: 1093 LRTAIKGIFEIKKVDILWKDLSKGSKSYNGSSGELYLRVTMSSDSDRGTFWGALINHCHR 1152

Query: 1679 IWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAA 1500
            I PMIDW  SHPD+I+     +GIDA  + FL +L+SA   TG S+LP+HL L A+ L+A
Sbjct: 1153 IMPMIDWARSHPDNIHHFCSAFGIDAGWQHFLHNLSSATSDTGTSILPKHLRLVANSLSA 1212

Query: 1499 TGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGR 1320
            +GEFV LN+KG+A+QR   +V+SP  QACFSNPG   ++AAK  +VDNL GT+D L WG 
Sbjct: 1213 SGEFVGLNSKGMARQRNHASVSSPFVQACFSNPGSTFLKAAKSGVVDNLQGTLDGLAWGN 1272

Query: 1319 RPPIGTGAQFDIMYSWKGHELTKPMDVYCLLD-SHSQEALKVKLPKKHHEISAKSLAQHL 1143
               +GT  QFD+MYS K  EL K +DVY LL+ S  Q   ++   + ++  S K  +Q  
Sbjct: 1273 CLSMGTSGQFDVMYSEKVQELAKSVDVYDLLETSFDQLDQEINTSQSNNYSSDKCNSQ-- 1330

Query: 1142 FKYEDFTATPYKSLMKPMKS-LSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFVV 966
            F+++     P +   K  KS +   ++  DI +L+   R +L+KY I   L+E DK  ++
Sbjct: 1331 FRHKKGRYAPKEP--KQWKSVIRNFMTANDIQKLTSASRFILNKYPIDQILSERDKLTIM 1388

Query: 965  IALCFHPRKSDKIGTGITDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQQFN 786
              L FHPR+++K+G+G   IKVG H K  +SRCF + R DGT+EDFSY KC+  AL   +
Sbjct: 1389 KVLHFHPRRNEKLGSGPQHIKVGWHPKFTDSRCFFIIRTDGTVEDFSYRKCILGALDVVD 1448

Query: 785  RDRA---KAKWLNGSQTQ 741
             +++   K KW     T+
Sbjct: 1449 PEKSKIQKKKWSGHDDTE 1466


>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
            [Cicer arietinum] gi|502160026|ref|XP_004511608.1|
            PREDICTED: DNA-directed RNA polymerase D subunit 1-like
            isoform X2 [Cicer arietinum]
            gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
            RNA polymerase D subunit 1-like isoform X3 [Cicer
            arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
            DNA-directed RNA polymerase D subunit 1-like isoform X4
            [Cicer arietinum]
          Length = 1475

 Score =  303 bits (775), Expect = 2e-79
 Identities = 171/378 (45%), Positives = 235/378 (62%), Gaps = 6/378 (1%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDASP-SKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQ 1680
            LRT ++G  E KKVDILWKD S  SKS  G+   LYLRV MS   D+  FW  L + C +
Sbjct: 1094 LRTAIKGIFEIKKVDILWKDLSKGSKSYNGSSGELYLRVTMSSDSDRGTFWGALINHCHR 1153

Query: 1679 IWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAA 1500
            I PMIDW  SHPD+I+     +GIDA  + FL +L+SA   TG S+LP+HL L A+ L+A
Sbjct: 1154 IMPMIDWARSHPDNIHHFCSAFGIDAGWQHFLHNLSSATSDTGTSILPKHLRLVANSLSA 1213

Query: 1499 TGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGR 1320
            +GEFV LN+KG+A+QR   +V+SP  QACFSNPG   ++AAK  +VDNL GT+D L WG 
Sbjct: 1214 SGEFVGLNSKGMARQRNHASVSSPFVQACFSNPGSTFLKAAKSGVVDNLQGTLDGLAWGN 1273

Query: 1319 RPPIGTGAQFDIMYSWKGHELTKPMDVYCLLD-SHSQEALKVKLPKKHHEISAKSLAQHL 1143
               +GT  QFD+MYS K  EL K +DVY LL+ S  Q   ++   + ++  S K  +Q  
Sbjct: 1274 CLSMGTSGQFDVMYSEKVQELAKSVDVYDLLETSFDQLDQEINTSQSNNYSSDKCNSQ-- 1331

Query: 1142 FKYEDFTATPYKSLMKPMKS-LSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFVV 966
            F+++     P +   K  KS +   ++  DI +L+   R +L+KY I   L+E DK  ++
Sbjct: 1332 FRHKKGRYAPKEP--KQWKSVIRNFMTANDIQKLTSASRFILNKYPIDQILSERDKLTIM 1389

Query: 965  IALCFHPRKSDKIGTGITDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQQFN 786
              L FHPR+++K+G+G   IKVG H K  +SRCF + R DGT+EDFSY KC+  AL   +
Sbjct: 1390 KVLHFHPRRNEKLGSGPQHIKVGWHPKFTDSRCFFIIRTDGTVEDFSYRKCILGALDVVD 1449

Query: 785  RDRA---KAKWLNGSQTQ 741
             +++   K KW     T+
Sbjct: 1450 PEKSKIQKKKWSGHDDTE 1467


>gb|ESW30448.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1464

 Score =  298 bits (762), Expect = 7e-78
 Identities = 163/378 (43%), Positives = 236/378 (62%), Gaps = 4/378 (1%)
 Frame = -3

Query: 1856 LRTVLRGFPEFKKVDILWKDASP-SKSCGGTPNGLYLRVFMSESCDKPKFWSILADSCLQ 1680
            L T ++GF + KKVDILW + S  + S  G+   LYLRV ++ S +  +FW +L + C +
Sbjct: 1084 LGTTIKGFMDIKKVDILWNNQSKGTNSYNGSSGELYLRVTVASSGNTGRFWGVLVNHCHK 1143

Query: 1679 IWPMIDWEWSHPDDINDMTLGYGIDAARELFLSSLNSAICATGKSVLPEHLILTADCLAA 1500
            I  +IDW  SHPD+IN ++  YGID A + +  SL SAI  TGKS+LP+HL L A+ ++A
Sbjct: 1144 IMQIIDWPRSHPDNINYLSSAYGIDVAWQYYYKSLASAISDTGKSILPKHLRLLANSMSA 1203

Query: 1499 TGEFVTLNAKGLAQQRKETAVASPLNQACFSNPGDCLVRAAKMRIVDNLPGTVDVLTWGR 1320
            +GEFV LNAKG+AQQR+  +V+SP  QACFSNPG   ++AAK  + DNL G++D L WG 
Sbjct: 1204 SGEFVGLNAKGMAQQRQHASVSSPFVQACFSNPGRSFIKAAKSELTDNLQGSLDALAWGN 1263

Query: 1319 RPPIGTGAQFDIMYSWKGHELTKPMDVYCLLDSHSQEALKVKLPKKHHEISAKSLAQHLF 1140
             P +GT   FDI+YS KGHE+ K +DVY LL++   +         H+  S K  ++  F
Sbjct: 1264 CPSMGTSGLFDIIYSEKGHEVDKAVDVYKLLEASFDKPNNKIGFHAHNNSSGKCGSE--F 1321

Query: 1139 KYEDFTATPYKSLMKPMKSLSELLSGKDILELSQKLRNLLHKYDIGSRLNEEDKPFVVIA 960
            ++++  A  +K   +    L   ++  DI +L+   R +L+KY+I   L+E D+  ++  
Sbjct: 1322 RHKNGYA--FKEGKQWKNILRNFVTVNDIQKLTTASRCILNKYEIDELLSEFDRSTILRV 1379

Query: 959  LCFHPRKSDKIGTGITDIKVGCHAKHENSRCFILERKDGTLEDFSYHKCVHNALQQFNRD 780
            L FHPR+S+K+G G  DIKVG H K ++SRCF + R DGT+EDFSY KC+  AL+  +  
Sbjct: 1380 LNFHPRRSEKLGIGPQDIKVGWHPKFKDSRCFHIVRTDGTVEDFSYRKCILRALEVVDPK 1439

Query: 779  RA---KAKWLNGSQTQTE 735
             +   K KW      Q +
Sbjct: 1440 MSKIQKKKWSARDDAQVQ 1457