BLASTX nr result
ID: Rauwolfia21_contig00017657
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00017657
(261 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 143 2e-32
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera] 142 6e-32
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] 140 1e-31
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 140 2e-31
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 139 4e-31
ref|XP_006471604.1| PREDICTED: leucoanthocyanidin dioxygenase-li... 132 6e-29
dbj|BAA22288.1| polyprotein [Oryza australiensis] 119 3e-25
emb|CAN70446.1| hypothetical protein VITISV_026192 [Vitis vinifera] 119 6e-25
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 118 7e-25
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 118 9e-25
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 118 9e-25
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc... 117 1e-24
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc... 117 2e-24
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl... 116 3e-24
emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera] 116 3e-24
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-... 116 4e-24
emb|CAN68275.1| hypothetical protein VITISV_026802 [Vitis vinifera] 116 4e-24
emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera] 115 6e-24
gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus] 115 8e-24
emb|CAN63026.1| hypothetical protein VITISV_026313 [Vitis vinifera] 114 1e-23
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 143 bits (361), Expect = 2e-32
Identities = 65/86 (75%), Positives = 77/86 (89%)
Frame = -1
Query: 261 IPFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSN 82
+P RHG+ LS +QCPKT +++E+M R+PYASAVGSLMYAMLCTRPDICFAVG+VSR+QSN
Sbjct: 416 LPSRHGVHLSKEQCPKTPQDEEKMRRVPYASAVGSLMYAMLCTRPDICFAVGVVSRYQSN 475
Query: 81 PGEVHWQAVKHILKYLKGTRDYMLVY 4
PG HW AVKHILKYL+ TR+YMLVY
Sbjct: 476 PGLDHWVAVKHILKYLRRTRNYMLVY 501
>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
Length = 1544
Score = 142 bits (357), Expect = 6e-32
Identities = 66/87 (75%), Positives = 72/87 (82%)
Frame = -1
Query: 261 IPFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSN 82
+PFRHG+ LS Q PKT EE E M +PYASAVGSLMYAMLCTRPDICFAVGMVSR Q N
Sbjct: 1292 LPFRHGIVLSKDQSPKTPEEIESMKAVPYASAVGSLMYAMLCTRPDICFAVGMVSRFQFN 1351
Query: 81 PGEVHWQAVKHILKYLKGTRDYMLVYR 1
PG HW AVKHI+KYLK TRDYMLV++
Sbjct: 1352 PGREHWTAVKHIIKYLKRTRDYMLVFQ 1378
>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
Length = 633
Score = 140 bits (354), Expect = 1e-31
Identities = 66/87 (75%), Positives = 72/87 (82%)
Frame = -1
Query: 261 IPFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSN 82
+PFRHG+ LS Q PKT EE E M +PYASAVGSLMYAMLCTRPDICFAVGMVSR QSN
Sbjct: 381 LPFRHGIXLSKDQSPKTPEEIESMKAVPYASAVGSLMYAMLCTRPDICFAVGMVSRFQSN 440
Query: 81 PGEVHWQAVKHILKYLKGTRDYMLVYR 1
G HW AVKHI+KYLK TRDYMLV++
Sbjct: 441 XGREHWXAVKHIIKYLKRTRDYMLVFQ 467
>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 140 bits (352), Expect = 2e-31
Identities = 66/87 (75%), Positives = 72/87 (82%)
Frame = -1
Query: 261 IPFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSN 82
+PFRHG+ LS Q PKT EE E M +PYASAVGSLMYAMLCTRPDI FAVGMVSR QSN
Sbjct: 1033 LPFRHGIVLSKDQSPKTPEEIESMKAVPYASAVGSLMYAMLCTRPDIYFAVGMVSRFQSN 1092
Query: 81 PGEVHWQAVKHILKYLKGTRDYMLVYR 1
PG HW AVKHI+KYLK TRDYMLV++
Sbjct: 1093 PGREHWTAVKHIIKYLKRTRDYMLVFQ 1119
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 139 bits (350), Expect = 4e-31
Identities = 63/86 (73%), Positives = 75/86 (87%)
Frame = -1
Query: 261 IPFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSN 82
+PFRHG+ LS +QCPKT +E E M IPY+SAVGSLMYAMLCTRPDIC++VG+VSR+QSN
Sbjct: 1076 LPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSN 1135
Query: 81 PGEVHWQAVKHILKYLKGTRDYMLVY 4
PG HW AVK+ILKYL+ TR+YMLVY
Sbjct: 1136 PGRDHWTAVKNILKYLRRTRNYMLVY 1161
>ref|XP_006471604.1| PREDICTED: leucoanthocyanidin dioxygenase-like [Citrus sinensis]
Length = 629
Score = 132 bits (331), Expect = 6e-29
Identities = 59/86 (68%), Positives = 72/86 (83%)
Frame = -1
Query: 261 IPFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSN 82
+PFRHG+ S Q PKT+EE ERM R+PYA A+GSLMYAMLCTRPDI FAVG+VSR+Q N
Sbjct: 437 LPFRHGITFSKDQSPKTSEEIERMRRVPYAEAMGSLMYAMLCTRPDIYFAVGIVSRYQFN 496
Query: 81 PGEVHWQAVKHILKYLKGTRDYMLVY 4
PG +W A+KHI+KYLK T++YML+Y
Sbjct: 497 PGPQYWTAIKHIIKYLKRTKNYMLMY 522
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 119 bits (299), Expect = 3e-25
Identities = 51/86 (59%), Positives = 68/86 (79%)
Frame = -1
Query: 261 IPFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSN 82
+P HG+ LS QCP+T +E+ +M +PYASA+GS+MYAMLCTRPD+ +A+ SR+QS+
Sbjct: 1066 LPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTRPDVSYALSATSRYQSD 1125
Query: 81 PGEVHWQAVKHILKYLKGTRDYMLVY 4
PGE HW AVK+ILKYL+ T+D LVY
Sbjct: 1126 PGEGHWTAVKNILKYLRRTKDMFLVY 1151
>emb|CAN70446.1| hypothetical protein VITISV_026192 [Vitis vinifera]
Length = 308
Score = 119 bits (297), Expect = 6e-25
Identities = 56/85 (65%), Positives = 64/85 (75%)
Frame = -1
Query: 261 IPFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSN 82
+PF+H + LS QC KT EEKE M IPYASAVGSL Y MLCT+P I F VGMVSR+QSN
Sbjct: 217 LPFKHRIPLSLNQCAKTLEEKECMELIPYASAVGSLTYLMLCTKPYIFFVVGMVSRYQSN 276
Query: 81 PGEVHWQAVKHILKYLKGTRDYMLV 7
PG HW +KHILKYL+ RDY+ V
Sbjct: 277 PGPKHWTTIKHILKYLRRMRDYVFV 301
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 118 bits (296), Expect = 7e-25
Identities = 50/86 (58%), Positives = 69/86 (80%)
Frame = -1
Query: 261 IPFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSN 82
+P HG+ LS QCP T +E+++MS IPYASA+GS+MYAM+CTRPD+ +A+ + SR+Q++
Sbjct: 646 LPMAHGINLSKNQCPTTTDERDKMSDIPYASAIGSIMYAMICTRPDVSYALSVTSRYQAD 705
Query: 81 PGEVHWQAVKHILKYLKGTRDYMLVY 4
P E HW AVK+ILKYL+ T+D LVY
Sbjct: 706 PSEGHWTAVKNILKYLRRTKDVFLVY 731
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 118 bits (295), Expect = 9e-25
Identities = 53/86 (61%), Positives = 67/86 (77%)
Frame = -1
Query: 261 IPFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSN 82
IP HG+ LS QCP T +E+ERMS+IPYASA+GS+MYAML TRPD+ A+ M SR+QS+
Sbjct: 713 IPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPDVACALSMTSRYQSD 772
Query: 81 PGEVHWQAVKHILKYLKGTRDYMLVY 4
PGE HW V++I KYL+ T+D LVY
Sbjct: 773 PGESHWIVVRNIFKYLRRTKDKFLVY 798
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 118 bits (295), Expect = 9e-25
Identities = 51/86 (59%), Positives = 67/86 (77%)
Frame = -1
Query: 261 IPFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSN 82
+P HG+ L QCP+T +E+ +MS IPYASA+GS+MYAMLCTRPD+ +A+ SR+QS+
Sbjct: 937 LPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSD 996
Query: 81 PGEVHWQAVKHILKYLKGTRDYMLVY 4
PGE HW AVK+ILKYL+ T+D L Y
Sbjct: 997 PGESHWIAVKNILKYLRRTKDMFLAY 1022
>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 117 bits (294), Expect = 1e-24
Identities = 51/86 (59%), Positives = 67/86 (77%)
Frame = -1
Query: 261 IPFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSN 82
+P HG+ L QCP+T +E+ +MS IPYASA+GS+MYAMLCT PD+ +A+ SR+QS+
Sbjct: 800 LPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTHPDVSYALSATSRYQSD 859
Query: 81 PGEVHWQAVKHILKYLKGTRDYMLVY 4
PGE HW AVK+ILKYL+ T+D LVY
Sbjct: 860 PGESHWIAVKNILKYLRRTKDMFLVY 885
>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 117 bits (292), Expect = 2e-24
Identities = 50/86 (58%), Positives = 68/86 (79%)
Frame = -1
Query: 261 IPFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSN 82
+P HG+ L QCP+T +E+ +MS IPYASA+GS+MYAMLCTRPD+ +A+ S++QS+
Sbjct: 690 LPLSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVPYALSATSQYQSD 749
Query: 81 PGEVHWQAVKHILKYLKGTRDYMLVY 4
PGE HW AVK+ILKYL+ T+D L+Y
Sbjct: 750 PGESHWIAVKNILKYLRRTKDMFLIY 775
>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
Length = 1321
Score = 116 bits (291), Expect = 3e-24
Identities = 53/86 (61%), Positives = 65/86 (75%)
Frame = -1
Query: 258 PFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSNP 79
P G + QCPK E+E+M IPYAS VGSLMYA +CTRPDI FAVGM+ R+QSNP
Sbjct: 1072 PIVKGDRFNLNQCPKNDFEREQMKNIPYASVVGSLMYAQVCTRPDIAFAVGMLGRYQSNP 1131
Query: 78 GEVHWQAVKHILKYLKGTRDYMLVYR 1
G HW+A K +L+YL+GT+DYML+YR
Sbjct: 1132 GIDHWRAAKKVLRYLQGTKDYMLMYR 1157
>emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]
Length = 1180
Score = 116 bits (291), Expect = 3e-24
Identities = 52/86 (60%), Positives = 66/86 (76%)
Frame = -1
Query: 258 PFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSNP 79
P G LS QCP+ E+E+M +IPYASAVGSLMYA CTRPDI FAVGM+ R+QS+P
Sbjct: 947 PILKGDKLSKMQCPRNNIEREQMKKIPYASAVGSLMYAQTCTRPDISFAVGMLGRYQSDP 1006
Query: 78 GEVHWQAVKHILKYLKGTRDYMLVYR 1
G HW+A K +++YL+GT+DYML Y+
Sbjct: 1007 GFEHWKAAKKVMRYLQGTKDYMLTYK 1032
>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77550379|gb|ABA93176.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 938
Score = 116 bits (290), Expect = 4e-24
Identities = 50/86 (58%), Positives = 67/86 (77%)
Frame = -1
Query: 261 IPFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSN 82
+P HG+ L QCP+T E+ +MS IPYASA+GS+MYAMLCTRPD+ +A+ S++QS+
Sbjct: 785 LPMSHGINLGKNQCPQTTNERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSQYQSD 844
Query: 81 PGEVHWQAVKHILKYLKGTRDYMLVY 4
PGE HW A+K+ILKYL+ T+D LVY
Sbjct: 845 PGESHWIALKNILKYLRRTKDMFLVY 870
>emb|CAN68275.1| hypothetical protein VITISV_026802 [Vitis vinifera]
Length = 982
Score = 116 bits (290), Expect = 4e-24
Identities = 51/86 (59%), Positives = 66/86 (76%)
Frame = -1
Query: 258 PFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSNP 79
P G LS QCP+ E+E+M +IPYASAVGSLMYA CTRPDI FA+GM+ R+QS+P
Sbjct: 733 PILKGDKLSKMQCPRNNMEREQMKKIPYASAVGSLMYAQTCTRPDISFAIGMLRRYQSDP 792
Query: 78 GEVHWQAVKHILKYLKGTRDYMLVYR 1
G HW+A K +++YL+GT+DYML Y+
Sbjct: 793 GFEHWKATKKVMRYLQGTKDYMLTYK 818
>emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera]
Length = 745
Score = 115 bits (288), Expect = 6e-24
Identities = 50/75 (66%), Positives = 63/75 (84%)
Frame = -1
Query: 225 QCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSNPGEVHWQAVKHI 46
QCPK E+E+M IPYASAVGSLMYA +CTRPDI FAVGM+ R+QSNPG+ HW+A K +
Sbjct: 468 QCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGKDHWKAAKKV 527
Query: 45 LKYLKGTRDYMLVYR 1
++YL+GT+DY L+YR
Sbjct: 528 MRYLQGTKDYKLMYR 542
>gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus]
Length = 358
Score = 115 bits (287), Expect = 8e-24
Identities = 51/85 (60%), Positives = 66/85 (77%)
Frame = -1
Query: 258 PFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSNP 79
P LS+ QCP + EEKE MSR+PY+SAVGSLMYAM+CTRPD+ +AV MVSR+ +NP
Sbjct: 162 PIAAHFKLSACQCPDSNEEKEYMSRVPYSSAVGSLMYAMICTRPDLAYAVSMVSRYMANP 221
Query: 78 GEVHWQAVKHILKYLKGTRDYMLVY 4
G HW+AV+ +L+YL GTRDY + +
Sbjct: 222 GREHWKAVQWVLRYLSGTRDYCMCF 246
>emb|CAN63026.1| hypothetical protein VITISV_026313 [Vitis vinifera]
Length = 345
Score = 114 bits (286), Expect = 1e-23
Identities = 51/86 (59%), Positives = 65/86 (75%)
Frame = -1
Query: 258 PFRHGLALSSQQCPKTAEEKERMSRIPYASAVGSLMYAMLCTRPDICFAVGMVSRHQSNP 79
P G LS QCP+ E+E+M +IPYASAVGSLMYA CTRPDI FAV M+ R+QS+P
Sbjct: 96 PILKGDKLSKMQCPRNNXEREQMKKIPYASAVGSLMYAQTCTRPDISFAVXMLGRYQSDP 155
Query: 78 GEVHWQAVKHILKYLKGTRDYMLVYR 1
G HW+A K +++YL+GT+DYML Y+
Sbjct: 156 GFEHWKAAKKVMRYLQGTKDYMLTYK 181