BLASTX nr result
ID: Rauwolfia21_contig00017499
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00017499
(340 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002327956.1| predicted protein [Populus trichocarpa] gi|5... 175 5e-42
ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleop... 175 6e-42
gb|EOY07016.1| RNA-binding family protein [Theobroma cacao] 172 3e-41
ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleop... 172 3e-41
gb|EMJ27769.1| hypothetical protein PRUPE_ppa024322mg [Prunus pe... 172 4e-41
ref|XP_006364676.1| PREDICTED: U11/U12 small nuclear ribonucleop... 168 6e-40
ref|XP_006443089.1| hypothetical protein CICLE_v10021004mg [Citr... 168 6e-40
ref|XP_006847425.1| hypothetical protein AMTR_s00153p00074100 [A... 166 3e-39
gb|EPS72263.1| hypothetical protein M569_02496, partial [Genlise... 166 4e-39
ref|XP_004247986.1| PREDICTED: uncharacterized protein LOC101256... 165 5e-39
ref|XP_006495303.1| PREDICTED: U11/U12 small nuclear ribonucleop... 165 7e-39
ref|XP_006494192.1| PREDICTED: U11/U12 small nuclear ribonucleop... 165 7e-39
ref|XP_006443096.1| hypothetical protein CICLE_v10020999mg [Citr... 164 1e-38
ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, pu... 163 3e-38
ref|XP_004298234.1| PREDICTED: uncharacterized protein LOC101310... 162 3e-38
ref|XP_004492943.1| PREDICTED: U11/U12 small nuclear ribonucleop... 161 1e-37
ref|XP_003551845.1| PREDICTED: U11/U12 small nuclear ribonucleop... 159 4e-37
gb|EXB68701.1| U11/U12 small nuclear ribonucleoprotein 35 kDa pr... 159 5e-37
ref|NP_850395.1| RNA-binding (RRM/RBD/RNP motifs) family protein... 157 1e-36
ref|XP_006397501.1| hypothetical protein EUTSA_v10001559mg [Eutr... 157 1e-36
>ref|XP_002327956.1| predicted protein [Populus trichocarpa]
gi|566211726|ref|XP_006372915.1| U1 small nuclear
ribonucleoprotein 70 kDa [Populus trichocarpa]
gi|550319563|gb|ERP50712.1| U1 small nuclear
ribonucleoprotein 70 kDa [Populus trichocarpa]
Length = 317
Score = 175 bits (444), Expect = 5e-42
Identities = 80/96 (83%), Positives = 89/96 (92%)
Frame = -1
Query: 289 MSRSNVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPY 110
MS ++NSVFYA+ YHPIQAGSIDGTD PHDNAVYRALLC+++GLYDPFGDPK IGDPY
Sbjct: 1 MSGRSINSVFYADAYHPIQAGSIDGTDTAPHDNAVYRALLCSSAGLYDPFGDPKAIGDPY 60
Query: 109 CTVFVGRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
CT+FVGRLSHLTTE TLR+AMSKYG+VKNLRLVRHI
Sbjct: 61 CTIFVGRLSHLTTEDTLRKAMSKYGKVKNLRLVRHI 96
>ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cucumis sativus]
gi|449498819|ref|XP_004160643.1| PREDICTED: U11/U12
small nuclear ribonucleoprotein 35 kDa protein-like
[Cucumis sativus]
Length = 333
Score = 175 bits (443), Expect = 6e-42
Identities = 82/96 (85%), Positives = 89/96 (92%)
Frame = -1
Query: 289 MSRSNVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPY 110
MS SNVN VFYA+ YHPIQAGSIDGTDIL HDNAVYRALLC+++GLYDP GDPKV GDPY
Sbjct: 1 MSGSNVNKVFYADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 60
Query: 109 CTVFVGRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
CT+FVGRLSHLTTE TLR+AMSKYG+VKNLRLVRHI
Sbjct: 61 CTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHI 96
>gb|EOY07016.1| RNA-binding family protein [Theobroma cacao]
Length = 338
Score = 172 bits (437), Expect = 3e-41
Identities = 81/93 (87%), Positives = 87/93 (93%)
Frame = -1
Query: 280 SNVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPYCTV 101
+NVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLC+N+ LYDP GDPK+IGDPY T+
Sbjct: 5 NNVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCSNASLYDPLGDPKLIGDPYHTI 64
Query: 100 FVGRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
FV RLSHLTTE TL +AMSKYGRVKNLRLVRHI
Sbjct: 65 FVSRLSHLTTEHTLHKAMSKYGRVKNLRLVRHI 97
>ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Vitis vinifera] gi|297743756|emb|CBI36639.3| unnamed
protein product [Vitis vinifera]
Length = 340
Score = 172 bits (437), Expect = 3e-41
Identities = 80/96 (83%), Positives = 89/96 (92%)
Frame = -1
Query: 289 MSRSNVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPY 110
MS S N+VFYAE+YHPIQAGSIDGTD LPHDNAVYRALLC+++GLYDPFGDPKVIGDPY
Sbjct: 1 MSGSRANAVFYAESYHPIQAGSIDGTDTLPHDNAVYRALLCSSAGLYDPFGDPKVIGDPY 60
Query: 109 CTVFVGRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
CTVFVG L+HLTTE TL +AMSK+GRVK+LRLVRHI
Sbjct: 61 CTVFVGHLNHLTTEDTLHKAMSKFGRVKSLRLVRHI 96
>gb|EMJ27769.1| hypothetical protein PRUPE_ppa024322mg [Prunus persica]
Length = 309
Score = 172 bits (436), Expect = 4e-41
Identities = 78/92 (84%), Positives = 88/92 (95%)
Frame = -1
Query: 277 NVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPYCTVF 98
NVNSVFYAE YHP+QAGSIDGTDILPHDNAVYRA LC+++GLYDP GDPK+IGDPYCT+F
Sbjct: 7 NVNSVFYAEAYHPVQAGSIDGTDILPHDNAVYRAFLCSSAGLYDPLGDPKLIGDPYCTLF 66
Query: 97 VGRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
VG LSHLTTEQ+LR+A+SKYGRVK+LRLVRHI
Sbjct: 67 VGHLSHLTTEQSLRKALSKYGRVKDLRLVRHI 98
>ref|XP_006364676.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Solanum tuberosum]
Length = 352
Score = 168 bits (426), Expect = 6e-40
Identities = 77/97 (79%), Positives = 88/97 (90%)
Frame = -1
Query: 292 KMSRSNVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDP 113
+ S +N+NSVFYAE+YHPIQAGSIDGTDILPHDNA+YRALLC+N+GLYDPFGDPK IGDP
Sbjct: 9 RRSTANLNSVFYAESYHPIQAGSIDGTDILPHDNAIYRALLCSNAGLYDPFGDPKAIGDP 68
Query: 112 YCTVFVGRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
Y T+FVG LS TTEQTL + M+KYGRVKNLR+VRHI
Sbjct: 69 YSTLFVGHLSQFTTEQTLLKEMNKYGRVKNLRIVRHI 105
>ref|XP_006443089.1| hypothetical protein CICLE_v10021004mg [Citrus clementina]
gi|557545351|gb|ESR56329.1| hypothetical protein
CICLE_v10021004mg [Citrus clementina]
Length = 339
Score = 168 bits (426), Expect = 6e-40
Identities = 79/96 (82%), Positives = 87/96 (90%)
Frame = -1
Query: 289 MSRSNVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPY 110
MS +N+NSVFYAE YHPIQAGSIDGTDI PHDNA+ RALLC+++GLYDP GDPK IGDPY
Sbjct: 1 MSGNNINSVFYAELYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPVGDPKAIGDPY 60
Query: 109 CTVFVGRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
CTVFVGRLSH T+E TLR+AMSKYGRVKNLRLVR I
Sbjct: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI 96
>ref|XP_006847425.1| hypothetical protein AMTR_s00153p00074100 [Amborella trichopoda]
gi|548850591|gb|ERN09006.1| hypothetical protein
AMTR_s00153p00074100 [Amborella trichopoda]
Length = 316
Score = 166 bits (420), Expect = 3e-39
Identities = 77/93 (82%), Positives = 87/93 (93%)
Frame = -1
Query: 280 SNVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPYCTV 101
+N+NSVFYA++YHPIQAGSIDGTDILPHDNAVYRA LC+++GLYDP GDPKVIGDPYCTV
Sbjct: 6 NNINSVFYADSYHPIQAGSIDGTDILPHDNAVYRAFLCSSAGLYDPTGDPKVIGDPYCTV 65
Query: 100 FVGRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
FVG LS T E++LR+AMSKYGRVKNLRLVRHI
Sbjct: 66 FVGHLSPHTGEESLRKAMSKYGRVKNLRLVRHI 98
>gb|EPS72263.1| hypothetical protein M569_02496, partial [Genlisea aurea]
Length = 263
Score = 166 bits (419), Expect = 4e-39
Identities = 75/93 (80%), Positives = 86/93 (92%)
Frame = -1
Query: 280 SNVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPYCTV 101
+ ++SVFYAETYHPIQAGSIDGTD LPHDN VYRALLCAN+GLYD FGDPK IGDPYCT+
Sbjct: 5 AGLSSVFYAETYHPIQAGSIDGTDTLPHDNGVYRALLCANAGLYDAFGDPKAIGDPYCTL 64
Query: 100 FVGRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
FV RLSH+T E+TL++AMS+YGRVKNL+LVRHI
Sbjct: 65 FVARLSHITNEETLKKAMSQYGRVKNLQLVRHI 97
>ref|XP_004247986.1| PREDICTED: uncharacterized protein LOC101256810 [Solanum
lycopersicum]
Length = 355
Score = 165 bits (418), Expect = 5e-39
Identities = 76/97 (78%), Positives = 88/97 (90%)
Frame = -1
Query: 292 KMSRSNVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDP 113
K +N+NSVFYAE+YHPIQAGSIDGTDILPHDNA+YRALL +N+GLYDPFGDPK IGDP
Sbjct: 9 KRCGANLNSVFYAESYHPIQAGSIDGTDILPHDNAIYRALLGSNAGLYDPFGDPKAIGDP 68
Query: 112 YCTVFVGRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
Y T+FVG LSHLTTE TL++ M+KYG+VKNLR+VRHI
Sbjct: 69 YSTLFVGHLSHLTTEHTLQKEMNKYGKVKNLRIVRHI 105
>ref|XP_006495303.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Citrus sinensis]
Length = 339
Score = 165 bits (417), Expect = 7e-39
Identities = 77/96 (80%), Positives = 87/96 (90%)
Frame = -1
Query: 289 MSRSNVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPY 110
MS +N+NSVFYA +YHPIQAGSIDGTDI PHDNA+ RALLC+++GLYDP GDPK IGDP+
Sbjct: 1 MSGNNINSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPH 60
Query: 109 CTVFVGRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
CTVFVGRLSH T+E TLR+AMSKYGRVKNLRLVR I
Sbjct: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI 96
>ref|XP_006494192.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Citrus sinensis]
Length = 151
Score = 165 bits (417), Expect = 7e-39
Identities = 77/96 (80%), Positives = 87/96 (90%)
Frame = -1
Query: 289 MSRSNVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPY 110
MS +N+NSVFYA +YHPIQAGSIDGTDI PHDNA+ RALLC+++GLYDP GDPK IGDP+
Sbjct: 1 MSGNNINSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPH 60
Query: 109 CTVFVGRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
CTVFVGRLSH T+E TLR+AMSKYGRVKNLRLVR I
Sbjct: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVRDI 96
>ref|XP_006443096.1| hypothetical protein CICLE_v10020999mg [Citrus clementina]
gi|557545358|gb|ESR56336.1| hypothetical protein
CICLE_v10020999mg [Citrus clementina]
Length = 339
Score = 164 bits (414), Expect = 1e-38
Identities = 76/94 (80%), Positives = 86/94 (91%)
Frame = -1
Query: 289 MSRSNVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPY 110
MS +N+NSVFYA +YHPIQAGSIDGTDI PHDNA+ RALLC+++GLYDP GDPK IGDP+
Sbjct: 1 MSGNNINSVFYAGSYHPIQAGSIDGTDIHPHDNAICRALLCSSAGLYDPLGDPKAIGDPH 60
Query: 109 CTVFVGRLSHLTTEQTLRQAMSKYGRVKNLRLVR 8
CTVFVGRLSH T+E TLR+AMSKYGRVKNLRLVR
Sbjct: 61 CTVFVGRLSHFTSEDTLRKAMSKYGRVKNLRLVR 94
>ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
communis] gi|223530750|gb|EEF32618.1| U1 small nuclear
ribonucleoprotein 70 kD, putative [Ricinus communis]
Length = 389
Score = 163 bits (412), Expect = 3e-38
Identities = 75/96 (78%), Positives = 86/96 (89%)
Frame = -1
Query: 289 MSRSNVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPY 110
M + VNSVFYA++YHPIQAGSIDGTDILPHDNA+YRA LC ++GLYDP GDPKVIGDP+
Sbjct: 1 MRETKVNSVFYAKSYHPIQAGSIDGTDILPHDNAIYRAFLCFSAGLYDPLGDPKVIGDPF 60
Query: 109 CTVFVGRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
CT+FVGRLSH TTE TL +AMSKYG+V+NLRLVR I
Sbjct: 61 CTLFVGRLSHSTTENTLLKAMSKYGKVRNLRLVRDI 96
>ref|XP_004298234.1| PREDICTED: uncharacterized protein LOC101310314 [Fragaria vesca
subsp. vesca]
Length = 363
Score = 162 bits (411), Expect = 3e-38
Identities = 75/89 (84%), Positives = 83/89 (93%)
Frame = -1
Query: 268 SVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPYCTVFVGR 89
+VFYAETYHPIQAGSIDGTD LPHD+AVYRA LC+++ LYDP GDPK++GDPYCT+FVGR
Sbjct: 6 AVFYAETYHPIQAGSIDGTDTLPHDSAVYRAWLCSSAALYDPSGDPKLLGDPYCTLFVGR 65
Query: 88 LSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
LSHLTTE TLRQAMSKYGRVK LRLVRHI
Sbjct: 66 LSHLTTEDTLRQAMSKYGRVKKLRLVRHI 94
>ref|XP_004492943.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cicer arietinum]
Length = 377
Score = 161 bits (407), Expect = 1e-37
Identities = 73/92 (79%), Positives = 84/92 (91%)
Frame = -1
Query: 277 NVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPYCTVF 98
N+NSVFY+++YHPIQAGSIDGTDI+PHDNA++RA LC++ GLYDPFGDPK GDPYCT+F
Sbjct: 7 NLNSVFYSDSYHPIQAGSIDGTDIVPHDNAIFRAQLCSSIGLYDPFGDPKATGDPYCTLF 66
Query: 97 VGRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
VGRLS LTTE TLR+ MSKYGRVKNLRLVR I
Sbjct: 67 VGRLSRLTTEDTLRKVMSKYGRVKNLRLVRDI 98
>ref|XP_003551845.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Glycine max]
Length = 347
Score = 159 bits (402), Expect = 4e-37
Identities = 73/92 (79%), Positives = 82/92 (89%)
Frame = -1
Query: 277 NVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPYCTVF 98
N+NSVFYA++YHPIQAGSIDGTD++PHDNAVYRA LC++ GLYDPFGDPK GDPYCT+F
Sbjct: 7 NLNSVFYADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLYDPFGDPKATGDPYCTLF 66
Query: 97 VGRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
V RLS LTTE LR+ MSKYGRVKNLRLVR I
Sbjct: 67 VARLSRLTTEDDLRKVMSKYGRVKNLRLVRDI 98
>gb|EXB68701.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Morus
notabilis]
Length = 324
Score = 159 bits (401), Expect = 5e-37
Identities = 73/95 (76%), Positives = 82/95 (86%)
Frame = -1
Query: 286 SRSNVNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPYC 107
S +N+VFYAETYHPIQAGSIDGTD LPHDNAVYRA LC+++ LYDP GDP ++GDPYC
Sbjct: 4 SEKAINAVFYAETYHPIQAGSIDGTDFLPHDNAVYRAHLCSSASLYDPLGDPNLVGDPYC 63
Query: 106 TVFVGRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
T+FV LSH TTE TLR+AM KYGRVKNLRLVRHI
Sbjct: 64 TLFVACLSHHTTEHTLRKAMRKYGRVKNLRLVRHI 98
>ref|NP_850395.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|18252907|gb|AAL62380.1| putative U1 small
nuclear ribonucleoprotein 70 kDa [Arabidopsis thaliana]
gi|21389635|gb|AAM48016.1| putative U1 small nuclear
ribonucleoprotein 70 kDa [Arabidopsis thaliana]
gi|330255163|gb|AEC10257.1| RNA-binding (RRM/RBD/RNP
motifs) family protein [Arabidopsis thaliana]
Length = 333
Score = 157 bits (398), Expect = 1e-36
Identities = 72/91 (79%), Positives = 79/91 (86%)
Frame = -1
Query: 274 VNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPYCTVFV 95
VN VFYA +YHPIQAGSIDGTD+ PHDN V RALLC N+GLYDP GD K +GDPYCT+FV
Sbjct: 9 VNKVFYATSYHPIQAGSIDGTDVAPHDNGVRRALLCYNAGLYDPSGDSKAVGDPYCTLFV 68
Query: 94 GRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
GRLSH TTE TLR+ MSKYGR+KNLRLVRHI
Sbjct: 69 GRLSHHTTEDTLREVMSKYGRIKNLRLVRHI 99
>ref|XP_006397501.1| hypothetical protein EUTSA_v10001559mg [Eutrema salsugineum]
gi|557098574|gb|ESQ38954.1| hypothetical protein
EUTSA_v10001559mg [Eutrema salsugineum]
Length = 314
Score = 157 bits (397), Expect = 1e-36
Identities = 72/91 (79%), Positives = 79/91 (86%)
Frame = -1
Query: 274 VNSVFYAETYHPIQAGSIDGTDILPHDNAVYRALLCANSGLYDPFGDPKVIGDPYCTVFV 95
VN VFYA +YHPIQAGSIDGTD+ PHDN V RALLC N+GLYDP GD K +GDPYCT+FV
Sbjct: 9 VNRVFYATSYHPIQAGSIDGTDVAPHDNGVRRALLCYNAGLYDPSGDSKAVGDPYCTLFV 68
Query: 94 GRLSHLTTEQTLRQAMSKYGRVKNLRLVRHI 2
GRLSHLTTE TLR AMSKYGR+K+ RLVRHI
Sbjct: 69 GRLSHLTTEDTLRDAMSKYGRIKSFRLVRHI 99