BLASTX nr result
ID: Rauwolfia21_contig00017286
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00017286
(281 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 127 2e-27
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 124 2e-26
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 124 2e-26
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 123 2e-26
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 122 5e-26
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 122 5e-26
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 122 5e-26
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 122 5e-26
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 122 6e-26
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 121 8e-26
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group] 120 1e-25
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 120 1e-25
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 120 2e-25
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 120 2e-25
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera] 120 2e-25
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 120 2e-25
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group] 120 2e-25
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 119 3e-25
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 119 3e-25
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 119 3e-25
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 127 bits (318), Expect = 2e-27
Identities = 58/93 (62%), Positives = 71/93 (76%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
+A+ S E W AM EEM+SL KN W+L PK +K +GCKWVF KKEG + + I Y
Sbjct: 787 DAIESVESAGWIGAMTEEMESLHKNSVWELVPKPKERKLVGCKWVFRKKEGIHEDDAITY 846
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIRIL 279
KARLVAKGY+QKEGVDY+E+FSPVVKH+SIR+L
Sbjct: 847 KARLVAKGYSQKEGVDYDEIFSPVVKHTSIRLL 879
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 124 bits (310), Expect = 2e-26
Identities = 56/93 (60%), Positives = 72/93 (77%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EA+ S + RW AM +EM+SL+KN TW+L +LPK KK I CKW+F +KEG ++ RY
Sbjct: 1028 EAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARY 1087
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIRIL 279
KARL+AKGY+Q G+D+N+VFSPVVKHSSIR L
Sbjct: 1088 KARLIAKGYSQIPGIDFNDVFSPVVKHSSIRTL 1120
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 124 bits (310), Expect = 2e-26
Identities = 57/93 (61%), Positives = 72/93 (77%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EA+ S + RW AM +EM+SL+KN TW+L +LPK KK I CKW+F +KEG ++ RY
Sbjct: 793 EAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARY 852
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIRIL 279
KARLVAKGY+Q G+D+N+VFSPVVKHSSIR L
Sbjct: 853 KARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTL 885
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 123 bits (309), Expect = 2e-26
Identities = 57/93 (61%), Positives = 72/93 (77%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EA+ S E +W A++EEM SL+KN+TW+L PK +K +G KWVF +K+G RY
Sbjct: 776 EAINSNEADQWVKAIQEEMDSLRKNETWELVTKPKDRKVVGSKWVFKRKQGTLGNEAPRY 835
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIRIL 279
KARLVAKG++QKEGVDYNE+FSPVVKHSSIR+L
Sbjct: 836 KARLVAKGFSQKEGVDYNEIFSPVVKHSSIRLL 868
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 122 bits (306), Expect = 5e-26
Identities = 57/91 (62%), Positives = 67/91 (73%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EAVR + W AM EEMQSL+KN TW++ LPK KK I CKW+F +KEG +Y
Sbjct: 822 EAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKY 881
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIR 273
KARLVA+GY+Q GVDYN+VFSPVVKHSSIR
Sbjct: 882 KARLVARGYSQIPGVDYNDVFSPVVKHSSIR 912
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 122 bits (306), Expect = 5e-26
Identities = 57/91 (62%), Positives = 67/91 (73%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EAVR + W AM EEMQSL+KN TW++ LPK KK I CKW+F +KEG +Y
Sbjct: 822 EAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKY 881
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIR 273
KARLVA+GY+Q GVDYN+VFSPVVKHSSIR
Sbjct: 882 KARLVARGYSQIPGVDYNDVFSPVVKHSSIR 912
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 122 bits (306), Expect = 5e-26
Identities = 57/91 (62%), Positives = 67/91 (73%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EAVR + W AM EEMQSL+KN TW++ LPK KK I CKW+F +KEG +Y
Sbjct: 822 EAVRCGDSENWISAMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKY 881
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIR 273
KARLVA+GY+Q GVDYN+VFSPVVKHSSIR
Sbjct: 882 KARLVARGYSQIPGVDYNDVFSPVVKHSSIR 912
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 122 bits (306), Expect = 5e-26
Identities = 54/93 (58%), Positives = 71/93 (76%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EA+ S +W +AM++EM+SLQ+N+TW L P K+ I CKW+F + EG PD +Y
Sbjct: 819 EAMESVHCDKWLEAMQDEMESLQRNQTWTLIPNPGNKRLINCKWIFKRNEGIPDVEPPKY 878
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIRIL 279
KARLVA+G+ Q+EGVD+NE+FSPVVKHSSIRIL
Sbjct: 879 KARLVARGFTQREGVDFNEIFSPVVKHSSIRIL 911
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 122 bits (305), Expect = 6e-26
Identities = 57/93 (61%), Positives = 70/93 (75%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EA+ S + RW AM +EM SL+KN TWKL +LPK KK I CKW+F +KEG ++ RY
Sbjct: 656 EAIVSDDCNRWITAMHDEMDSLEKNHTWKLVKLPKEKKLIHCKWIFKRKEGMSPTDEARY 715
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIRIL 279
KA LVAKGY+Q G+D+N+VFSPVVKHSSIR L
Sbjct: 716 KAMLVAKGYSQIPGIDFNDVFSPVVKHSSIRTL 748
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 121 bits (304), Expect = 8e-26
Identities = 55/93 (59%), Positives = 69/93 (74%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EA+RS E +WK A EEM S++KN TW + P+GK+ IGCKW+F +K G P RY
Sbjct: 828 EAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVIGCKWIFKRKAGIPGVEPPRY 887
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIRIL 279
KARLVAKG++Q+EG+DY E+FSPVVKH SIR L
Sbjct: 888 KARLVAKGFSQREGIDYQEIFSPVVKHVSIRYL 920
>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
Length = 576
Score = 120 bits (302), Expect = 1e-25
Identities = 58/91 (63%), Positives = 68/91 (74%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EAV S + W AM+EEMQSL+KN TWKL LPK KK + CKW+F +KEG R+
Sbjct: 144 EAVVSGDRENWISAMQEEMQSLEKNGTWKLVHLPKQKKPVHCKWIFKRKEGLSPSEPPRF 203
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIR 273
KARLVAKG++Q GVDYN+VFSPVVKHSSIR
Sbjct: 204 KARLVAKGFSQIAGVDYNDVFSPVVKHSSIR 234
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 120 bits (302), Expect = 1e-25
Identities = 55/93 (59%), Positives = 72/93 (77%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
+A+ S + RW AM +EM+SL+KN +W+L +LPK KK I CKW+F +KEG ++ RY
Sbjct: 730 DAIVSDDCNRWITAMHDEMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARY 789
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIRIL 279
KARLVAKGY+Q G+D+N+VFSPVVKHSSIR L
Sbjct: 790 KARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTL 822
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 120 bits (301), Expect = 2e-25
Identities = 54/93 (58%), Positives = 71/93 (76%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EA+ S + RW M +EM+SL+KN TW+L +LPK KK+I CKW+F +KEG ++ RY
Sbjct: 563 EAIVSDDCNRWITTMHDEMESLEKNHTWELVKLPKEKKSIRCKWIFKRKEGMSPSDEARY 622
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIRIL 279
KARLVAKGY+Q +D+N+VFSP+VKHSSIR L
Sbjct: 623 KARLVAKGYSQIPSIDFNDVFSPIVKHSSIRTL 655
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 120 bits (301), Expect = 2e-25
Identities = 54/93 (58%), Positives = 71/93 (76%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EA+ S + RW AM +EM+SL+KN TW+ +LPK KK I CKW+F +KEG ++ RY
Sbjct: 856 EAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARY 915
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIRIL 279
KARLVAKGY+Q G+D+N+VFSP++KHSSIR L
Sbjct: 916 KARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTL 948
>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
Length = 595
Score = 120 bits (301), Expect = 2e-25
Identities = 53/91 (58%), Positives = 71/91 (78%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EA+ + E RW AM EE+Q L KN+TW L + P+GK+AIGCKWV+ KKE K ++
Sbjct: 166 EAIHNQEKSRWMGAMVEEIQFLHKNQTWDLVEPPEGKRAIGCKWVYKKKEAISKKEGEKF 225
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIR 273
KARLVAKGY+Q++GVDY+E+FSP+V+H+SIR
Sbjct: 226 KARLVAKGYSQRKGVDYDEIFSPMVRHTSIR 256
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 120 bits (301), Expect = 2e-25
Identities = 54/93 (58%), Positives = 71/93 (76%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EA+ S + RW AM +EM+SL+KN TW+ +LPK KK I CKW+F +KEG ++ RY
Sbjct: 856 EAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARY 915
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIRIL 279
KARLVAKGY+Q G+D+N+VFSP++KHSSIR L
Sbjct: 916 KARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTL 948
>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
Length = 1007
Score = 120 bits (300), Expect = 2e-25
Identities = 55/93 (59%), Positives = 71/93 (76%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EA+ S + RW AM +EM+SL+KN TW+L +LPK KK I CKW+F +K+G ++ Y
Sbjct: 603 EAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKKGISPSDEAMY 662
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIRIL 279
KARLVAKGY+Q G+D+N+VFSPVVKHSSIR L
Sbjct: 663 KARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTL 695
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 119 bits (299), Expect = 3e-25
Identities = 57/91 (62%), Positives = 69/91 (75%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EAV S + +W AM+EEMQSL+KN TW+L LPK KK + CKW+F +KEG R+
Sbjct: 811 EAVVSGDREKWISAMQEEMQSLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRF 870
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIR 273
KARLVAKG++Q GVDYN+VFSPVVKHSSIR
Sbjct: 871 KARLVAKGFSQIVGVDYNDVFSPVVKHSSIR 901
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 119 bits (299), Expect = 3e-25
Identities = 53/93 (56%), Positives = 71/93 (76%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EA+ S++ +W AM +EM+SL KN+TW L P G+K I CKWVF KKEG ++Y
Sbjct: 796 EAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKY 855
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIRIL 279
KAR+VA+G+ Q+EGVDYNE+FSPVV+H+SIR+L
Sbjct: 856 KARVVARGFNQREGVDYNEIFSPVVRHTSIRVL 888
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 119 bits (299), Expect = 3e-25
Identities = 55/93 (59%), Positives = 71/93 (76%)
Frame = +1
Query: 1 EAVRSTEDGRWKDAMEEEMQSLQKNKTWKLTQLPKGKKAIGCKWVFAKKEGFPDKNDIRY 180
EA+ S RW AM +EM+SL+KN TW+L +LPK KK I CKW+F +K+G ++ RY
Sbjct: 700 EAIVSDGCNRWITAMHDEMESLEKNHTWELVKLPKEKKPIRCKWIFKRKKGMSPSDEARY 759
Query: 181 KARLVAKGYAQKEGVDYNEVFSPVVKHSSIRIL 279
KARLVAKGY+Q G+D+N+VFSPV+KHSSIR L
Sbjct: 760 KARLVAKGYSQIPGIDFNDVFSPVLKHSSIRTL 792