BLASTX nr result

ID: Rauwolfia21_contig00017257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00017257
         (378 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546321.1| PREDICTED: DELLA protein RGL2-like [Glycine ...    44   2e-07
ref|XP_002316033.1| hypothetical protein POPTR_0010s15360g [Popu...    42   2e-07
ref|XP_006488851.1| PREDICTED: DELLA protein GAI1-like [Citrus s...    42   1e-06
ref|XP_006419398.1| hypothetical protein CICLE_v10004586mg [Citr...    42   1e-06
ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus commun...    41   1e-06
gb|ESW19350.1| hypothetical protein PHAVU_006G117200g [Phaseolus...    46   1e-06
ref|XP_004229078.1| PREDICTED: DELLA protein RGL2-like [Solanum ...    47   2e-06
ref|XP_002316034.1| hypothetical protein POPTR_0010s15370g [Popu...    45   1e-05

>ref|XP_003546321.1| PREDICTED: DELLA protein RGL2-like [Glycine max]
          Length = 593

 Score = 44.3 bits (103), Expect(2) = 2e-07
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
 Frame = +3

Query: 12  ASKVLSTTDIMRMARSRLLKCTSQDFDVVS--FLIDGPFDAN-SSISSETQKXXXXXXXX 182
           A + LST D+MR+A +R ++ +S   D  S  FL + PF  + S  S E ++        
Sbjct: 164 AGRNLSTEDLMRIAGTRFIQSSSSSSDSESLPFLENHPFGFSFSGFSDEEKEDLELAESL 223

Query: 183 XXSAFKVYNGQFERARKLLTVC 248
              A KV N QFERA KLL+ C
Sbjct: 224 LACAEKVGNKQFERASKLLSHC 245



 Score = 36.6 bits (83), Expect(2) = 2e-07
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = +2

Query: 260 SSISGNPVQKIVFFLAEALGLRIGRELGTVPFESLKK 370
           SS +GNPV++IV + AEAL  RI  E G V  + L+K
Sbjct: 249 SSKTGNPVKRIVHYFAEALRQRIDTETGRVSSKDLQK 285


>ref|XP_002316033.1| hypothetical protein POPTR_0010s15360g [Populus trichocarpa]
           gi|222865073|gb|EEF02204.1| hypothetical protein
           POPTR_0010s15360g [Populus trichocarpa]
          Length = 561

 Score = 41.6 bits (96), Expect(2) = 2e-07
 Identities = 20/36 (55%), Positives = 27/36 (75%)
 Frame = +2

Query: 260 SSISGNPVQKIVFFLAEALGLRIGRELGTVPFESLK 367
           SS +GNPVQ++V++ +EAL  RI RE G V  ESL+
Sbjct: 215 SSNTGNPVQRVVYYFSEALRKRIDRETGKVASESLE 250



 Score = 39.3 bits (90), Expect(2) = 2e-07
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = +3

Query: 12  ASKVLSTTDIMRMARSRLLKCTSQDFDVVSFLIDGPFDAN-SSISSETQKXXXXXXXXXX 188
           A + LST +IMR A  + ++ + Q   V S L+  P+D + S +S E  K          
Sbjct: 133 AGQKLSTEEIMRFAGVKFIQSSIQMAGVGS-LLKYPYDLSFSGLSDEETKNVELAECMLA 191

Query: 189 SAFKVYNGQFERARKLLTVC 248
           SA KV N Q++ AR+LL  C
Sbjct: 192 SAEKVGNQQYDSARRLLNQC 211


>ref|XP_006488851.1| PREDICTED: DELLA protein GAI1-like [Citrus sinensis]
          Length = 600

 Score = 42.0 bits (97), Expect(2) = 1e-06
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = +3

Query: 15  SKVLSTTDIMRMARSRLLKCTSQDFDVVSFLIDGPFDAN-SSISSETQKXXXXXXXXXXS 191
           S+ LS  +IMR+A  R ++  S+  + V  ++  PFD + S +S E  +          +
Sbjct: 175 SRKLSVEEIMRIAGERFIRSCSRAVEDVVSMLSNPFDLSFSGLSDEEIRNVELAEFLLAA 234

Query: 192 AFKVYNGQFERARKLLTVC 248
           A KV + Q+ERA +LL  C
Sbjct: 235 AEKVGDQQYERATRLLNQC 253



 Score = 36.2 bits (82), Expect(2) = 1e-06
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = +2

Query: 260 SSISGNPVQKIVFFLAEALGLRIGRELGTVPFESLKKIR 376
           SS +GNPVQ++V++ +EAL  RI R+ G +  +  +  R
Sbjct: 257 SSKNGNPVQRVVYYFSEALRERIDRDTGRITTKQTRMTR 295


>ref|XP_006419398.1| hypothetical protein CICLE_v10004586mg [Citrus clementina]
           gi|557521271|gb|ESR32638.1| hypothetical protein
           CICLE_v10004586mg [Citrus clementina]
          Length = 600

 Score = 42.0 bits (97), Expect(2) = 1e-06
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = +3

Query: 15  SKVLSTTDIMRMARSRLLKCTSQDFDVVSFLIDGPFDAN-SSISSETQKXXXXXXXXXXS 191
           S+ LS  +IMR+A  R ++  S+  + V  ++  PFD + S +S E  +          +
Sbjct: 175 SRKLSVEEIMRIAGERFIRSCSRAVEDVVSMLSNPFDLSFSGLSDEEIRNVELAEFLLAA 234

Query: 192 AFKVYNGQFERARKLLTVC 248
           A KV + Q+ERA +LL  C
Sbjct: 235 AEKVGDQQYERATRLLNQC 253



 Score = 36.2 bits (82), Expect(2) = 1e-06
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = +2

Query: 260 SSISGNPVQKIVFFLAEALGLRIGRELGTVPFESLKKIR 376
           SS +GNPVQ++V++ +EAL  RI R+ G +  +  +  R
Sbjct: 257 SSKNGNPVQRVVYYFSEALRERIDRDTGRITTKQTRMTR 295


>ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus communis]
           gi|223537292|gb|EEF38923.1| DELLA protein GAI1, putative
           [Ricinus communis]
          Length = 594

 Score = 40.8 bits (94), Expect(2) = 1e-06
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
 Frame = +3

Query: 24  LSTTDIMRMARSRLLKCTSQDFDVVSFLIDGPFDAN-SSISSETQKXXXXXXXXXXSAFK 200
           LST DIMR+A +R L+ +  D   V+ + + PFD   S +S E  K          SA +
Sbjct: 165 LSTEDIMRIAGARFLQSSCHD---VASMFNNPFDLYFSGLSDEDAKHVELAESLLASAER 221

Query: 201 VYNGQFERARKLLTVC 248
           + N Q++ A +LL  C
Sbjct: 222 IGNQQYDSASRLLKQC 237



 Score = 37.0 bits (84), Expect(2) = 1e-06
 Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
 Frame = +2

Query: 236 AYRVYRQSSSIS---GNPVQKIVFFLAEALGLRIGRELGTVPFESLKK 370
           A R+ +Q  SIS   GNPVQ++V++ AEAL  RI  E G    + L K
Sbjct: 230 ASRLLKQCDSISSNTGNPVQRVVYYFAEALHDRIDIETGKTKSKELGK 277


>gb|ESW19350.1| hypothetical protein PHAVU_006G117200g [Phaseolus vulgaris]
          Length = 591

 Score = 45.8 bits (107), Expect(2) = 1e-06
 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = +3

Query: 24  LSTTDIMRMARSRLLKCTSQDFDVVSFLIDGPFDAN-SSISSETQKXXXXXXXXXXSAFK 200
           LST D+MR+A +R ++ +S + + + FL   P+  + S +S E ++          SA K
Sbjct: 168 LSTEDVMRIAGTRFIQSSSSESEPLPFLETHPYGFSFSGLSDEEKEDVALAESLLASAEK 227

Query: 201 VYNGQFERARKLLTVC 248
           V + QFERA KLL+ C
Sbjct: 228 VGHQQFERASKLLSHC 243



 Score = 32.0 bits (71), Expect(2) = 1e-06
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +2

Query: 260 SSISGNPVQKIVFFLAEALGLRIGRELGTVPFESLKK 370
           SS +G+PV++IV +  EAL  RI RE G    + L+K
Sbjct: 247 SSKTGSPVKRIVHYFVEALLQRIDRETGRGSSKDLQK 283


>ref|XP_004229078.1| PREDICTED: DELLA protein RGL2-like [Solanum lycopersicum]
          Length = 433

 Score = 46.6 bits (109), Expect(2) = 2e-06
 Identities = 32/87 (36%), Positives = 46/87 (52%)
 Frame = +3

Query: 3   SGSASKVLSTTDIMRMARSRLLKCTSQDFDVVSFLIDGPFDANSSISSETQKXXXXXXXX 182
           S   S VLSTT IM++A+ +L   TSQ+ D  S +I  P  A+  +S +  +        
Sbjct: 6   SDDHSMVLSTTTIMKIAKEQLKLYTSQNHDAYS-IIFSPLIADLGLSPQVTEEVELVLLL 64

Query: 183 XXSAFKVYNGQFERARKLLTVCIDSRL 263
             SA  + N Q + ARKLL +CI+  L
Sbjct: 65  LVSAEMLANRQLDCARKLLNLCINFSL 91



 Score = 30.8 bits (68), Expect(2) = 2e-06
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +2

Query: 269 SGNPVQKIVFFLAEALGLRIGRELG 343
           +GNPVQ++V++ AE+L  RI +  G
Sbjct: 93  AGNPVQRVVYYFAESLQKRINKGTG 117


>ref|XP_002316034.1| hypothetical protein POPTR_0010s15370g [Populus trichocarpa]
           gi|222865074|gb|EEF02205.1| hypothetical protein
           POPTR_0010s15370g [Populus trichocarpa]
          Length = 588

 Score = 45.1 bits (105), Expect(2) = 1e-05
 Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = +3

Query: 24  LSTTDIMRMARSRLLKCTSQDFDVVSFLIDGPFDA-NSSISSETQKXXXXXXXXXXSAFK 200
           LST +IM+MA ++ ++  S+  D  S +++ PFD   S +S E  K          SA K
Sbjct: 160 LSTEEIMKMAGAKFIQSFSRMVDTAS-MLNNPFDLFFSGLSEEAAKNVELAELLLASAEK 218

Query: 201 VYNGQFERARKLLTVC 248
           V N QFERA + L  C
Sbjct: 219 VGNQQFERANRFLNYC 234



 Score = 29.6 bits (65), Expect(2) = 1e-05
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +2

Query: 260 SSISGNPVQKIVFFLAEALGLRIGRELGTV 349
           SS   +PVQ++V + +EAL  RI RE G +
Sbjct: 238 SSNGESPVQRVVHYFSEALRERIDRETGRI 267


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