BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00017186
         (485 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus pe...   125   6e-27
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   122   4e-26
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-...   121   8e-26
gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobrom...   120   1e-25
gb|EXB75636.1| RNA polymerase sigma factor rpoD [Morus notabilis]     118   7e-25
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-...   117   2e-24
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-...   116   4e-24
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-...   115   6e-24
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr...   115   6e-24
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...   115   6e-24
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   115   6e-24
dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsi...   112   4e-23
ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-...   112   5e-23
ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis tha...   110   2e-22
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp....   110   2e-22
gb|AAM91534.1| sigma factor SigC [Arabidopsis thaliana]               110   2e-22
ref|XP_003588449.1| RNA polymerase sigma-B factor [Medicago trun...   110   3e-22
ref|XP_004498453.1| PREDICTED: RNA polymerase sigma factor sigC-...   109   3e-22
ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutr...   109   3e-22
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu...   109   4e-22

>gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score =  125 bits (314), Expect = 6e-27
 Identities = 62/91 (68%), Positives = 75/91 (82%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E  PDTS+ SPEETV+RQHM  DI+++LKGL  RERQVL+LR+GL +   KSLEEIGRLF
Sbjct: 463 EFTPDTSLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLF 522

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHYL 212
            VSKEW+RKIE+KAL KLR E++ + LSHYL
Sbjct: 523 HVSKEWIRKIEKKALMKLRVEESHKYLSHYL 553


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 560

 Score =  122 bits (307), Expect = 4e-26
 Identities = 55/91 (60%), Positives = 74/91 (81%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E +PDTS+ SPEE V+RQHM+ D++N+L+ L+ RERQVL+LRFGL   Q KSLEEIGR F
Sbjct: 468 EFLPDTSVQSPEEVVMRQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKSLEEIGRHF 527

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHYL 212
            VSKEWVR++E++ +T+LR E+  +NL HY+
Sbjct: 528 HVSKEWVRRLEKRVMTRLRNEETCRNLRHYI 558


>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
           tuberosum]
          Length = 555

 Score =  121 bits (304), Expect = 8e-26
 Identities = 55/90 (61%), Positives = 76/90 (84%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E+ PD SI SPEETV+RQ +V ++Y++L+ L+P+E+QV+  RFGL++ Q KSLEEIGRL+
Sbjct: 464 ELTPDKSITSPEETVMRQDIVDNMYSLLESLDPKEQQVIYFRFGLETHQRKSLEEIGRLY 523

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHY 215
            VSKEW+R+IER+ALTKLR  D FQ+++HY
Sbjct: 524 GVSKEWIRRIERRALTKLRNADYFQHITHY 553


>gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
          Length = 848

 Score =  120 bits (302), Expect = 1e-25
 Identities = 57/91 (62%), Positives = 74/91 (81%)
 Frame = -2

Query: 484  EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
            E IPD S+ SPE+TV+RQHM  DI+++L GL+ RERQV++LR+GL+    KSLEEIGRLF
Sbjct: 756  EFIPDLSVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSLEEIGRLF 815

Query: 304  SVSKEWVRKIERKALTKLRKEDAFQNLSHYL 212
             VSKEW+R+IE KA+ KLR ++  +NLSHYL
Sbjct: 816  HVSKEWIRRIEMKAMKKLRDKETCRNLSHYL 846


>gb|EXB75636.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 476

 Score =  118 bits (296), Expect = 7e-25
 Identities = 59/91 (64%), Positives = 76/91 (83%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E + D SI +PEETV+RQHM  DI+N+L+ L+PRERQVL+LR+GL + Q KSLEEIG+LF
Sbjct: 385 EFMADMSIKTPEETVMRQHMKSDIHNLLETLDPRERQVLVLRYGLINCQPKSLEEIGKLF 444

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHYL 212
            VSKEW+RKIE+KALTKLR ++  ++ SHYL
Sbjct: 445 KVSKEWIRKIEKKALTKLR-DETNEDFSHYL 474


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
           lycopersicum]
          Length = 551

 Score =  117 bits (293), Expect = 2e-24
 Identities = 53/90 (58%), Positives = 74/90 (82%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E+ PD S+ SPEE V+RQ +V ++Y +L+ L+P+E+QV+  RFGL++ Q KSLEEIGRL+
Sbjct: 460 ELTPDKSVTSPEEFVMRQDIVDNMYALLESLDPKEQQVIYFRFGLETHQRKSLEEIGRLY 519

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHY 215
            VSKEW+R+IER+ALTKLR  D FQ+++HY
Sbjct: 520 GVSKEWIRRIERRALTKLRSADYFQHITHY 549


>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
           subsp. vesca]
          Length = 545

 Score =  116 bits (290), Expect = 4e-24
 Identities = 56/91 (61%), Positives = 72/91 (79%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E  PD ++ +PEE+V+RQHM  DI+ +L+GL  RE++VL LR+GL     KSLEEIGRLF
Sbjct: 452 EFTPDIAVETPEESVMRQHMKNDIHVLLEGLNSREKKVLALRYGLNYCNPKSLEEIGRLF 511

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHYL 212
            VSKEW+RKIE+ ALTKLR E++ +NLSHYL
Sbjct: 512 HVSKEWIRKIEKNALTKLRNEESNKNLSHYL 542


>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
          Length = 534

 Score =  115 bits (288), Expect = 6e-24
 Identities = 53/93 (56%), Positives = 73/93 (78%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E  PD S+ SP+E V+RQHM  D++ IL+ L+ RERQVL+LR+GL   + KSLEEIG+LF
Sbjct: 442 EFAPDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRYGLNDHRPKSLEEIGKLF 501

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHYLYM 206
            VSKEW+RK+E+KA+TKLR  +  ++LSH+L +
Sbjct: 502 HVSKEWIRKLEKKAMTKLRDSETCRDLSHFLVL 534


>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
           gi|557553989|gb|ESR64003.1| hypothetical protein
           CICLE_v10007968mg [Citrus clementina]
          Length = 534

 Score =  115 bits (288), Expect = 6e-24
 Identities = 53/93 (56%), Positives = 73/93 (78%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E  PD S+ SP+E V+RQHM  D++ IL+ L+ RERQVL+LR+GL   + KSLEEIG+LF
Sbjct: 442 EFAPDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRYGLNDHRPKSLEEIGKLF 501

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHYLYM 206
            VSKEW+RK+E+KA+TKLR  +  ++LSH+L +
Sbjct: 502 HVSKEWIRKLEKKAMTKLRDSETCRDLSHFLVL 534


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
           gi|296081598|emb|CBI20603.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score =  115 bits (288), Expect = 6e-24
 Identities = 56/91 (61%), Positives = 70/91 (76%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E  PDTSI SPEE  ++Q    DI+N+LKGL+PRERQ+L+LR+G   QQ KSLEEIGR F
Sbjct: 469 EFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRF 528

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHYL 212
           +VSKEW+RK+E+ AL  LR E+  QNL HY+
Sbjct: 529 NVSKEWIRKLEKTALANLRDEEICQNLRHYV 559


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  115 bits (288), Expect = 6e-24
 Identities = 56/91 (61%), Positives = 70/91 (76%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E  PDTSI SPEE  ++Q    DI+N+LKGL+PRERQ+L+LR+G   QQ KSLEEIGR F
Sbjct: 519 EFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRF 578

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHYL 212
           +VSKEW+RK+E+ AL  LR E+  QNL HY+
Sbjct: 579 NVSKEWIRKLEKTALANLRDEEICQNLRHYV 609


>dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
          Length = 571

 Score =  112 bits (281), Expect = 4e-23
 Identities = 53/91 (58%), Positives = 73/91 (80%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E  PDT++ SPEE V+RQ    DI+++L+GLEPRE+QV++LR+GLQ  + KSLEEIG+LF
Sbjct: 479 EFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLF 538

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHYL 212
            VSKEW+RKIER+A+ KLR +   ++L +YL
Sbjct: 539 KVSKEWIRKIERRAMAKLRDQPNAEDLRYYL 569


>ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-like [Cucumis sativus]
           gi|449507267|ref|XP_004162982.1| PREDICTED: RNA
           polymerase sigma factor sigC-like [Cucumis sativus]
          Length = 559

 Score =  112 bits (280), Expect = 5e-23
 Identities = 57/91 (62%), Positives = 71/91 (78%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E   D SI SPEETV R+ M  DI+NIL+ LE RERQVL+LR+GL   + KSLEEIG+L 
Sbjct: 468 EFTADMSIQSPEETVKRKLMKKDIFNILQRLESRERQVLVLRYGLVDFEPKSLEEIGKLL 527

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHYL 212
            +SKEWVRKIE+KA+TKL+ E+  ++LSHYL
Sbjct: 528 HISKEWVRKIEKKAMTKLKNEETVKHLSHYL 558


>ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis thaliana]
           gi|75098239|sp|O24621.1|SIGC_ARATH RecName: Full=RNA
           polymerase sigma factor sigC; Short=Sigma factor C;
           Short=Sigma-C; AltName: Full=RNA polymerase sigma factor
           sig3; Short=Atsig3; Short=Sigma factor 3; Flags:
           Precursor gi|2353175|gb|AAB69386.1| sigma factor 3
           [Arabidopsis thaliana] gi|2463554|dbj|BAA22530.1| SigC
           [Arabidopsis thaliana] gi|5478585|dbj|BAA82450.1| sigma
           factor SigC [Arabidopsis thaliana]
           gi|7630012|emb|CAB88354.1| sigma factor SigC
           [Arabidopsis thaliana] gi|133778870|gb|ABO38775.1|
           At3g53920 [Arabidopsis thaliana]
           gi|332645638|gb|AEE79159.1| RNApolymerase sigma-subunit
           C [Arabidopsis thaliana]
          Length = 571

 Score =  110 bits (275), Expect = 2e-22
 Identities = 52/91 (57%), Positives = 72/91 (79%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E  PDT++ SPEE V+RQ    DI+++L+GLEPRE+QV++LR+GLQ  + KSLEEIG+L 
Sbjct: 479 EFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLL 538

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHYL 212
            VSKEW+RKIER+A+ KLR +   ++L +YL
Sbjct: 539 KVSKEWIRKIERRAMAKLRDQPNAEDLRYYL 569


>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323785|gb|EFH54206.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 568

 Score =  110 bits (275), Expect = 2e-22
 Identities = 52/91 (57%), Positives = 73/91 (80%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E  PDT++ SPEE V+RQ    DI+++L+GLEPRE+QV++LR+GLQ+ + KSLEEIG+L 
Sbjct: 476 EFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQNYRPKSLEEIGKLL 535

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHYL 212
            VSKEW+RKIER+A+ KLR +   ++L +YL
Sbjct: 536 RVSKEWIRKIERRAMAKLRDQPNAEDLRYYL 566


>gb|AAM91534.1| sigma factor SigC [Arabidopsis thaliana]
          Length = 291

 Score =  110 bits (275), Expect = 2e-22
 Identities = 52/91 (57%), Positives = 72/91 (79%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E  PDT++ SPEE V+RQ    DI+++L+GLEPRE+QV++LR+GLQ  + KSLEEIG+L 
Sbjct: 199 EFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLL 258

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHYL 212
            VSKEW+RKIER+A+ KLR +   ++L +YL
Sbjct: 259 KVSKEWIRKIERRAMAKLRDQPNAEDLRYYL 289


>ref|XP_003588449.1| RNA polymerase sigma-B factor [Medicago truncatula]
           gi|355477497|gb|AES58700.1| RNA polymerase sigma-B
           factor [Medicago truncatula]
          Length = 549

 Score =  110 bits (274), Expect = 3e-22
 Identities = 54/90 (60%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
 Frame = -2

Query: 478 IPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGL-QSQQCKSLEEIGRLFS 302
           +PD SI SPEETV++QH+  DI++IL+ L+ RERQ+++LRFGL    Q KSLE IG++F 
Sbjct: 458 MPDLSIESPEETVMKQHIKKDIHDILQSLDSRERQIIILRFGLNDDHQPKSLEYIGKIFK 517

Query: 301 VSKEWVRKIERKALTKLRKEDAFQNLSHYL 212
           VSKEW+RKIE+KALTKLR E     L++YL
Sbjct: 518 VSKEWIRKIEKKALTKLRNETNISKLNYYL 547


>ref|XP_004498453.1| PREDICTED: RNA polymerase sigma factor sigC-like [Cicer arietinum]
          Length = 545

 Score =  109 bits (273), Expect = 3e-22
 Identities = 53/87 (60%), Positives = 69/87 (79%)
 Frame = -2

Query: 472 DTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLFSVSK 293
           D SI SPEETV++QH+  DI++IL+ L+ RERQ+L+LRFGL   Q KSLE IG+++ VSK
Sbjct: 457 DMSIESPEETVMKQHIRKDIHDILQSLDSRERQILILRFGLNDHQPKSLEYIGKIYKVSK 516

Query: 292 EWVRKIERKALTKLRKEDAFQNLSHYL 212
           EW+RKIE+KALTKLR E     L++YL
Sbjct: 517 EWIRKIEKKALTKLRNEANTSKLNYYL 543


>ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutrema salsugineum]
           gi|312281919|dbj|BAJ33825.1| unnamed protein product
           [Thellungiella halophila] gi|557104759|gb|ESQ45093.1|
           hypothetical protein EUTSA_v10010251mg [Eutrema
           salsugineum]
          Length = 562

 Score =  109 bits (273), Expect = 3e-22
 Identities = 52/91 (57%), Positives = 71/91 (78%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E  PDT++ SPEE V+RQ    D++++L+GLEPRE+QV++LR+GLQ  + KSLEEIG+L 
Sbjct: 470 EFTPDTTMESPEEAVMRQSAWRDVHDLLQGLEPREKQVMVLRYGLQGFRPKSLEEIGKLL 529

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHYL 212
            VSKEW+RKIER+A+ KLR +   +NL  YL
Sbjct: 530 KVSKEWIRKIERRAMAKLRDQANAENLRFYL 560


>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
           gi|222854562|gb|EEE92109.1| hypothetical protein
           POPTR_0006s25090g [Populus trichocarpa]
          Length = 559

 Score =  109 bits (272), Expect = 4e-22
 Identities = 54/93 (58%), Positives = 71/93 (76%)
 Frame = -2

Query: 484 EIIPDTSINSPEETVVRQHMVGDIYNILKGLEPRERQVLLLRFGLQSQQCKSLEEIGRLF 305
           E IPD SI +PEE V+RQHM  +IY++L+GL+ RE+QV++LR+G +  Q KSL EIGRLF
Sbjct: 467 EFIPDMSIQNPEEAVMRQHMREEIYDLLRGLDSREKQVMVLRYGFKDNQPKSLAEIGRLF 526

Query: 304 SVSKEWVRKIERKALTKLRKEDAFQNLSHYLYM 206
            VSKE VRKIE+K + KLR E   +NLS Y+ +
Sbjct: 527 RVSKERVRKIEKKIMIKLRDEGIRRNLSRYMIL 559