BLASTX nr result
ID: Rauwolfia21_contig00017131
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00017131
(1496 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III s... 288 5e-75
emb|CBI33284.3| unnamed protein product [Vitis vinifera] 285 4e-74
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 284 8e-74
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s... 283 1e-73
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s... 283 2e-73
ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III s... 280 9e-73
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu... 276 2e-71
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas] 275 3e-71
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu... 275 5e-71
emb|CBI36309.3| unnamed protein product [Vitis vinifera] 272 3e-70
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s... 269 3e-69
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p... 268 4e-69
gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus pe... 266 1e-68
gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus... 264 8e-68
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr... 253 1e-64
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 253 2e-64
gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Mor... 251 7e-64
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s... 250 1e-63
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s... 250 1e-63
gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, put... 243 1e-61
>ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Solanum
tuberosum]
Length = 237
Score = 288 bits (736), Expect = 5e-75
Identities = 145/239 (60%), Positives = 180/239 (75%), Gaps = 1/239 (0%)
Frame = +2
Query: 404 MSHSGEAASLKRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKDTNLPDTVVN 583
MS S EAA++KRKRL S+ TQ L +AE VLNV+KSK+N+G+WV DVKK+ N+ +V+
Sbjct: 1 MSRSSEAAAMKRKRLDSS--TQGLVDAEFVVLNVVKSKKNLGVWVADVKKEANIAPALVD 58
Query: 584 XXXXXXXXXXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLC 763
IK+V IQNK +KHYMA+E+EPS+E++GGAWY G LDK FI L++ C
Sbjct: 59 KCLTSLVKKNLIKKVPTIQNKAKKHYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETC 118
Query: 764 KKIIRRQEVATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHS 943
K+I +VATVE ++DFL+K K ++ CT QQ+ EI+N +VLD+ IIEVKSTGLGEYHS
Sbjct: 119 LKVIGMMKVATVEGIHDFLKKRKVVE-CCTSQQVGEILNSMVLDDAIIEVKSTGLGEYHS 177
Query: 944 IPIGAQCYRIANMAGDDKGPK-IGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
IPIG+ CYRIA GD GPK IG MASIPCG CPRI CTPDGIISP+TCVYYTKWL+
Sbjct: 178 IPIGSACYRIA--VGDTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYYTKWLN 234
>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 285 bits (729), Expect = 4e-74
Identities = 142/240 (59%), Positives = 177/240 (73%), Gaps = 1/240 (0%)
Frame = +2
Query: 401 GMSHSGEAASLKRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKDTNLPDTVV 580
GMS S + +SLKRKR +N A+Q L +AER + ++I+SKE+MGIW RD+K++TNLPD VV
Sbjct: 61 GMSRS-QGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 119
Query: 581 NXXXXXXXXXXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDL 760
IKEVVNIQ+KGRKHYMA+EFEPSKE++GGAWYV G+LD +I LK
Sbjct: 120 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKT 179
Query: 761 CKKIIRRQEVATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYH 940
C +++ + +VAT E + + + K C+ QQIAEI+ LVLDNEI+EV+S+G GE+
Sbjct: 180 CVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFS 239
Query: 941 SIPIGAQCYRIANMAG-DDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
SIPIGA CYR N G GP IGAMASIPCG+CPRI QCTPDGIISP+TC YYTKWLD
Sbjct: 240 SIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLD 299
>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 284 bits (726), Expect = 8e-74
Identities = 141/239 (58%), Positives = 177/239 (74%), Gaps = 1/239 (0%)
Frame = +2
Query: 404 MSHSGEAASLKRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKDTNLPDTVVN 583
MS S + +SLKRKR +N A+Q L +AER + ++I+SKE+MGIW RD+K++TNLPD VV
Sbjct: 1 MSRS-QGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59
Query: 584 XXXXXXXXXXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLC 763
IKEVVNIQ+KGRKHYMA+EFEPSKE++GGAWYV G+LD +I LK+ C
Sbjct: 60 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119
Query: 764 KKIIRRQEVATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHS 943
+++ + +VAT E + + + K C+ QQIAEI+ LVLDNEI+EV+S+G GE+ S
Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179
Query: 944 IPIGAQCYRIANMAG-DDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
IPIGA CYR N G GP IGAMASIPCG+CPRI QCTPDGIISP+TC YYTKWLD
Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLD 238
>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 283 bits (724), Expect = 1e-73
Identities = 141/239 (58%), Positives = 176/239 (73%), Gaps = 1/239 (0%)
Frame = +2
Query: 404 MSHSGEAASLKRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKDTNLPDTVVN 583
MS S + SLKRKR +N A+Q L +AER + ++I+SKE+MGIW RD+K++TNLPD VV
Sbjct: 1 MSRS-QGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59
Query: 584 XXXXXXXXXXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLC 763
IKEVVNIQ+KGRKHYMA+EFEPSKE++GGAWYV G+LD +I LK+ C
Sbjct: 60 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETC 119
Query: 764 KKIIRRQEVATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHS 943
K++ + +VAT E + + + K C+ QQIAEI+ LVLDNEI+EV+S+G GE+ S
Sbjct: 120 VKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179
Query: 944 IPIGAQCYRIANMAG-DDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
IPIGA CYR N G GPKIGAMASIPCG+CPRI QCTPDGIISP++C YY KWLD
Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWLD 238
>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 283 bits (723), Expect = 2e-73
Identities = 141/239 (58%), Positives = 176/239 (73%), Gaps = 1/239 (0%)
Frame = +2
Query: 404 MSHSGEAASLKRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKDTNLPDTVVN 583
MS S + +SLKRKR +N A+Q L +AER + ++I+SKE+MGIW RD+K++TNLPD VV
Sbjct: 1 MSRS-QGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVT 59
Query: 584 XXXXXXXXXXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLC 763
IKEVVNIQ+KGRKHYMA+EFEPSKE++GGAWYV G+LD +I LK C
Sbjct: 60 KSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTC 119
Query: 764 KKIIRRQEVATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHS 943
+++ + +VAT E + + + K C+ QQIAEI+ LVLDNEI+EV+S+G GE+ S
Sbjct: 120 VRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSS 179
Query: 944 IPIGAQCYRIANMAG-DDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
IPIGA CYR N G GP IGAMASIPCG+CPRI QCTPDGIISP+TC YYTKWLD
Sbjct: 180 IPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLD 238
>ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like isoform
1 [Solanum lycopersicum] gi|460400960|ref|XP_004245998.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc6-like isoform 2 [Solanum lycopersicum]
Length = 237
Score = 280 bits (717), Expect = 9e-73
Identities = 143/239 (59%), Positives = 178/239 (74%), Gaps = 1/239 (0%)
Frame = +2
Query: 404 MSHSGEAASLKRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKDTNLPDTVVN 583
MS S EAA+LKRKR S+ TQ L +AE VLNV+KSK+N G+WV DVKK+ N+ +V+
Sbjct: 1 MSRSSEAAALKRKRPDSS--TQGLVDAELVVLNVVKSKKNQGVWVADVKKEANIAPALVD 58
Query: 584 XXXXXXXXXXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLC 763
IK+V +IQNK +K+YMA+E+EPS+E++GGAWY G LDK FI L++ C
Sbjct: 59 KCLTSLVKKNLIKKVPSIQNKAKKYYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETC 118
Query: 764 KKIIRRQEVATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHS 943
K+I +VATVE ++DFL+K K ++ CT QQ+ EI+N +VLD+ IIEVKSTGLGEYHS
Sbjct: 119 LKVIGMMKVATVEGIHDFLKKRKVVE-CCTSQQVGEILNSMVLDDSIIEVKSTGLGEYHS 177
Query: 944 IPIGAQCYRIANMAGDDKGPK-IGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
IPIG+ CYRIA G GPK IG MASIPCG CPRI CTPDGIISP+TCVY+TKWLD
Sbjct: 178 IPIGSVCYRIA--VGVTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYFTKWLD 234
>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
gi|222866141|gb|EEF03272.1| hypothetical protein
POPTR_0018s04220g [Populus trichocarpa]
Length = 239
Score = 276 bits (706), Expect = 2e-71
Identities = 139/238 (58%), Positives = 166/238 (69%)
Frame = +2
Query: 404 MSHSGEAASLKRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKDTNLPDTVVN 583
MS +SLKRKR N QSL ER + +VI+SK+++GIW RD+KK+ LPD VVN
Sbjct: 1 MSRLQGPSSLKRKRPEVNSPAQSLTEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVN 60
Query: 584 XXXXXXXXXXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLC 763
IKEVVNIQNKGRKH+MA EFEPSKE+SGGAWY+ G LD FI+ LK LC
Sbjct: 61 KSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLC 120
Query: 764 KKIIRRQEVATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHS 943
K+ I R+ VAT+E V D + A V TKQQI EI+ L+LDN I+EVKS G+GE+ S
Sbjct: 121 KRQIERRGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFAS 180
Query: 944 IPIGAQCYRIANMAGDDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
IP G CY+ + G PK GA+ASIPCG+CPRI QCTPDGIISP+TCVYY KWLD
Sbjct: 181 IPFGEVCYKYISKVGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWLD 238
>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
Length = 235
Score = 275 bits (704), Expect = 3e-71
Identities = 137/228 (60%), Positives = 166/228 (72%)
Frame = +2
Query: 434 KRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKDTNLPDTVVNXXXXXXXXXX 613
KRK+ SN + QSL E+A+ N I+SK++MGIW RD+K++TNLPDTVVN
Sbjct: 8 KRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRETNLPDTVVNKSLKVLQAKN 67
Query: 614 XIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLCKKIIRRQEVA 793
IKEVVNIQNKGRK+YMA EFEPSKE++GG WYV G+LD FI LKD CKK I + +VA
Sbjct: 68 LIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQCKKQIEKLKVA 127
Query: 794 TVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHSIPIGAQCYRI 973
TVE V DF+ + V TKQQI EI+ LVLDN++ EVKS G+GE+ SIP+G CY+
Sbjct: 128 TVEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNGMGEFASIPVGKVCYKS 187
Query: 974 ANMAGDDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
G PKIGAMASIPCG+CPRI CTP+GIISP+TCVYY KWL+
Sbjct: 188 IG-KGSSGDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGKWLE 234
>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
gi|550346475|gb|EEE82426.2| hypothetical protein
POPTR_0001s04090g [Populus trichocarpa]
Length = 291
Score = 275 bits (702), Expect = 5e-71
Identities = 137/240 (57%), Positives = 166/240 (69%)
Frame = +2
Query: 398 IGMSHSGEAASLKRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKDTNLPDTV 577
+GMS +SLKRKR N QSL ER + +VI+SK+++GIW RD+KK+ LPD V
Sbjct: 51 VGMSRVQGPSSLKRKRPELNSPVQSLTEHERILYDVIRSKQDIGIWTRDMKKEAKLPDNV 110
Query: 578 VNXXXXXXXXXXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKD 757
VN IKEVVNIQNKGRKH+MA EFEPSKE+SGGAWY+ G LD FI+ L+
Sbjct: 111 VNKSLKALRVKNLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLRQ 170
Query: 758 LCKKIIRRQEVATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEY 937
LCK+ I ++ VAT+E V D + A V TKQQI EI+ L+LDN I+EVKS G+GE+
Sbjct: 171 LCKRQIEKKGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNAIMEVKSNGMGEF 230
Query: 938 HSIPIGAQCYRIANMAGDDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
SIP G CYR + PK GA+ASIPCG+CPRI CTPDGIISP+TCVYY KWLD
Sbjct: 231 ASIPFGKVCYRYISKGALGGEPKAGALASIPCGVCPRISHCTPDGIISPKTCVYYQKWLD 290
>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 272 bits (695), Expect = 3e-70
Identities = 137/236 (58%), Positives = 174/236 (73%), Gaps = 1/236 (0%)
Frame = +2
Query: 398 IGMSHSGEAASLKRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKDTNLPDTV 577
+GMS S + SLKRKR +N A+Q L +AER + ++I+SKE+MGIW RD+K++TNLPD V
Sbjct: 89 LGMSRS-QGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNV 147
Query: 578 VNXXXXXXXXXXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKD 757
V IKEVVNIQ+KGRKHYMA+EFEPSKE++GGAWYV G+LD +I LK+
Sbjct: 148 VTKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKE 207
Query: 758 LCKKIIRRQEVATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEY 937
C K++ + +VAT E + + + K C+ QQIAEI+ LVLDNEI+EV+S+G GE+
Sbjct: 208 TCVKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEF 267
Query: 938 HSIPIGAQCYRIANMAG-DDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYY 1102
SIPIGA CYR N G GPKIGAMASIPCG+CPRI QCTPDGIISP++ V+Y
Sbjct: 268 SSIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSSVHY 323
>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Glycine
max]
Length = 239
Score = 269 bits (687), Expect = 3e-69
Identities = 135/238 (56%), Positives = 166/238 (69%)
Frame = +2
Query: 404 MSHSGEAASLKRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKDTNLPDTVVN 583
MSH ++SLKRKR T SL + ER + N+I SK++MGIW D+K++TNLPD++V
Sbjct: 1 MSHLQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVK 60
Query: 584 XXXXXXXXXXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLC 763
IKEVVNIQNKGRKHYMA EFEPSKE++GG WY G LD FI+ +KD+C
Sbjct: 61 KSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVC 120
Query: 764 KKIIRRQEVATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHS 943
K I RQ+VAT + V ++ K V T QQI EI+ LVLD+EI+EVKSTG G++ S
Sbjct: 121 LKYIFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSS 180
Query: 944 IPIGAQCYRIANMAGDDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
+P+G CYR + G+ K GAMASIPCG+CPRI CTPDGIISPRTCVYY KWLD
Sbjct: 181 VPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLD 238
>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
polymerase III subunit F, putative [Ricinus communis]
Length = 236
Score = 268 bits (685), Expect = 4e-69
Identities = 133/230 (57%), Positives = 163/230 (70%)
Frame = +2
Query: 428 SLKRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKDTNLPDTVVNXXXXXXXX 607
+LKRK+ S+ QSL E + NVI SK++MGIW RD+K++TNLPD VVN
Sbjct: 6 ALKRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVNKSLKVLQA 65
Query: 608 XXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLCKKIIRRQE 787
IKEVVNIQNKGRKHYMA EFEPSKE++GGAWYV G+LD FI LK++C K + + +
Sbjct: 66 KNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLKLK 125
Query: 788 VATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHSIPIGAQCY 967
VAT+E + D +++ TKQQI EIV LVLDN +IEVKS G+ E+ IPIG CY
Sbjct: 126 VATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPIGKVCY 185
Query: 968 RIANMAGDDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
+ P+IGAMASIPCG+CPRI QCTPDGIISP+TCVYY+KWLD
Sbjct: 186 KCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWLD 235
>gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
Length = 236
Score = 266 bits (681), Expect = 1e-68
Identities = 129/231 (55%), Positives = 167/231 (72%)
Frame = +2
Query: 425 ASLKRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKDTNLPDTVVNXXXXXXX 604
++LKRK+ S+ ++SL E+ V +VI+SK++MGIW RD+KK+ NLPD +V
Sbjct: 5 SALKRKQPDSSSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSLQ 64
Query: 605 XXXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLCKKIIRRQ 784
IKEVVN+Q+KGRKHYMA EFEPSKE++GG WY G LDK +I +KD KII +
Sbjct: 65 AKNLIKEVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNGTLDKYYISCVKDGFAKIIYQL 124
Query: 785 EVATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHSIPIGAQC 964
+VAT+E + D ++K K + TKQQI EI+ LVLD + EVKSTG+GE+ S P+G C
Sbjct: 125 KVATLEGISDEVKKSGIFKTSFTKQQIEEILRVLVLDKRVTEVKSTGMGEFGSFPVGKVC 184
Query: 965 YRIANMAGDDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
Y+ + G + PK+GAMASIPCG+CPRI QCTPDGIISPRTCVY+TKWLD
Sbjct: 185 YKSTSKGGSKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWLD 235
>gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
Length = 239
Score = 264 bits (674), Expect = 8e-68
Identities = 133/238 (55%), Positives = 166/238 (69%)
Frame = +2
Query: 404 MSHSGEAASLKRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKDTNLPDTVVN 583
MS E++SLKRKR + S+ + ER + N+I SK++MGIW D+K++TNLPD++V
Sbjct: 1 MSQLQESSSLKRKRQDLALVSGSMTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVK 60
Query: 584 XXXXXXXXXXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLC 763
IKEVVNIQNKGRKHYMA EFEPSKE++GG WY G LD FI+ +K++C
Sbjct: 61 KSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEVC 120
Query: 764 KKIIRRQEVATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHS 943
K I RQ+VAT + V ++ K V T QQI EI+ LVLD+EI EVKSTGLG++ S
Sbjct: 121 LKCIFRQKVATHDGVLEWSRKSGVFTVEVTAQQIDEILRALVLDDEIEEVKSTGLGDFSS 180
Query: 944 IPIGAQCYRIANMAGDDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
+P+G CYR + G+ K GAMASIPCG+CPRI CTPDGIISPRTCVYY KWLD
Sbjct: 181 VPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLD 238
>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gi|557529238|gb|ESR40488.1| hypothetical protein
CICLE_v10026399mg [Citrus clementina]
Length = 233
Score = 253 bits (646), Expect = 1e-64
Identities = 125/230 (54%), Positives = 161/230 (70%), Gaps = 2/230 (0%)
Frame = +2
Query: 434 KRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKD--TNLPDTVVNXXXXXXXX 607
KRKR SN + SL + ER + +VI+SK++MGIW RD+K++ NLPD +V
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 608 XXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLCKKIIRRQE 787
IKEVVNI +KG+KH MA+EFEPSKE+SGGAWY G LD FI +K C K I + +
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 788 VATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHSIPIGAQCY 967
VAT+E + D +++ A KV TKQQI EIV LVLDN+I+EVKS G GE+ +IP+G CY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 968 RIANMAGDDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
+ + G PK G++ASIPCG+CP+I C PDG+ISP+TCVYYTKWLD
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICKPDGVISPKTCVYYTKWLD 232
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Citrus
sinensis]
Length = 233
Score = 253 bits (645), Expect = 2e-64
Identities = 125/230 (54%), Positives = 161/230 (70%), Gaps = 2/230 (0%)
Frame = +2
Query: 434 KRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKD--TNLPDTVVNXXXXXXXX 607
KRKR SN + SL + ER + +VI+SK++MGIW RD+K++ NLPD +V
Sbjct: 3 KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 608 XXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLCKKIIRRQE 787
IKEVVNI +KG+KH MA+EFEPSKE+SGGAWY G LD FI +K C K I + +
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 788 VATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHSIPIGAQCY 967
VAT+E + D +++ A KV TKQQI EIV LVLDN+I+EVKS G GE+ +IP+G CY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 968 RIANMAGDDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
+ + G PK G++ASIPCG+CP+I CTPDG+ISP+TCVYYT WLD
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICTPDGVISPKTCVYYTTWLD 232
>gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
Length = 238
Score = 251 bits (640), Expect = 7e-64
Identities = 124/238 (52%), Positives = 160/238 (67%)
Frame = +2
Query: 404 MSHSGEAASLKRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKDTNLPDTVVN 583
MS E +SLKRK+ S SL ER + NVI+SK++MGIW++D+K+ +PD V N
Sbjct: 1 MSRLQEPSSLKRKQPDSRSPLDSLTEHERIIYNVIRSKQDMGIWMQDMKRVAKVPDNVAN 60
Query: 584 XXXXXXXXXXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLC 763
IKEVVNIQ +G+KHY+A EFEP+ E++GGAWY G +D I+ LKD C
Sbjct: 61 KALKSLETKKLIKEVVNIQKRGKKHYVAAEFEPATEITGGAWYSNGKMDFVVINILKDQC 120
Query: 764 KKIIRRQEVATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHS 943
K I +Q VAT+E + D + K V T QI E+V LVLDNE++EVKS G+GE+ S
Sbjct: 121 LKWIYKQRVATLEGILDAIRKSGISNVELTTVQIEELVRALVLDNEVVEVKSNGMGEFDS 180
Query: 944 IPIGAQCYRIANMAGDDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
IP+G CY+ + G PKIGAM+SIPCG+CPRI CTPDGIISP+TC YY++WLD
Sbjct: 181 IPVGKVCYK-STSKGSRGDPKIGAMSSIPCGVCPRISDCTPDGIISPKTCKYYSQWLD 237
>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like isoform
X2 [Citrus sinensis]
Length = 234
Score = 250 bits (638), Expect = 1e-63
Identities = 125/231 (54%), Positives = 161/231 (69%), Gaps = 3/231 (1%)
Frame = +2
Query: 434 KRKRLGSNPATQSLPNAERAVLNVIKS-KENMGIWVRDVKKD--TNLPDTVVNXXXXXXX 604
KRKR SN + SL + ER + +VI+S K++MGIW RD+K++ NLPD +V
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62
Query: 605 XXXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLCKKIIRRQ 784
IKEVVNI NKG+KH MA+EFEPSKE+SGGAWY G LD FI +K C K I +
Sbjct: 63 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 122
Query: 785 EVATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHSIPIGAQC 964
+VAT+E + D +++ A KV TKQQI EIV +VLDN+I+EVKS G GE+ +IP+G C
Sbjct: 123 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 182
Query: 965 YRIANMAGDDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
Y+ + G PK G+ AS+PCG+CP+I CTPDG+ISP+TCVYYTKWLD
Sbjct: 183 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLD 233
>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like isoform
X1 [Citrus sinensis]
Length = 252
Score = 250 bits (638), Expect = 1e-63
Identities = 125/231 (54%), Positives = 161/231 (69%), Gaps = 3/231 (1%)
Frame = +2
Query: 434 KRKRLGSNPATQSLPNAERAVLNVIKS-KENMGIWVRDVKKD--TNLPDTVVNXXXXXXX 604
KRKR SN + SL + ER + +VI+S K++MGIW RD+K++ NLPD +V
Sbjct: 21 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 80
Query: 605 XXXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLCKKIIRRQ 784
IKEVVNI NKG+KH MA+EFEPSKE+SGGAWY G LD FI +K C K I +
Sbjct: 81 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 140
Query: 785 EVATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHSIPIGAQC 964
+VAT+E + D +++ A KV TKQQI EIV +VLDN+I+EVKS G GE+ +IP+G C
Sbjct: 141 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 200
Query: 965 YRIANMAGDDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
Y+ + G PK G+ AS+PCG+CP+I CTPDG+ISP+TCVYYTKWLD
Sbjct: 201 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLD 251
>gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
[Theobroma cacao] gi|508778535|gb|EOY25791.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao]
Length = 237
Score = 243 bits (621), Expect = 1e-61
Identities = 121/230 (52%), Positives = 160/230 (69%)
Frame = +2
Query: 428 SLKRKRLGSNPATQSLPNAERAVLNVIKSKENMGIWVRDVKKDTNLPDTVVNXXXXXXXX 607
+LKRKR G+ + SL ER V +VI+ K++MGI RD+K++ NLPD +V
Sbjct: 9 ALKRKRPGAT--SDSLTEHERIVHDVIQGKQDMGISQRDMKREINLPDNLVTKCLKSLLA 66
Query: 608 XXXIKEVVNIQNKGRKHYMAIEFEPSKEVSGGAWYVGGHLDKGFIDELKDLCKKIIRRQE 787
IKEV NIQN+GRKH+++ EFEPS E++GGAWYV G LD +I+ LK+ C + I +
Sbjct: 67 KNLIKEVKNIQNRGRKHFISAEFEPSNEITGGAWYVEGSLDTEYINVLKEQCWRKIYGLK 126
Query: 788 VATVETVYDFLEKGKAIKVACTKQQIAEIVNCLVLDNEIIEVKSTGLGEYHSIPIGAQCY 967
VAT+E V D +++ ++ +KQQI EIV LVLDNE++EVKS+G GE+ SIP+G CY
Sbjct: 127 VATLEGVTDAIKRSNVSQIELSKQQIEEIVKALVLDNEVMEVKSSGTGEFASIPVGKVCY 186
Query: 968 RIANMAGDDKGPKIGAMASIPCGMCPRIMQCTPDGIISPRTCVYYTKWLD 1117
+ G PK+G MASIPCG+CP+I CTPDGIISP+TCVYY KWLD
Sbjct: 187 KCIGKRGYGGEPKVGTMASIPCGVCPQISHCTPDGIISPKTCVYYKKWLD 236