BLASTX nr result
ID: Rauwolfia21_contig00017042
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00017042
(835 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec... 78 6e-15
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261... 76 6e-14
ref|XP_002526000.1| cleavage and polyadenylation specificity fac... 76 6e-14
emb|CBI26829.3| unnamed protein product [Vitis vinifera] 76 6e-14
ref|XP_002314781.2| metallo-beta-lactamase family protein [Popul... 76 6e-14
gb|EXB32338.1| Cleavage and polyadenylation specificity factor s... 75 6e-14
ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec... 74 1e-13
ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citr... 74 1e-13
gb|EOY01103.1| Cleavage and polyadenylation specificity factor 7... 72 3e-13
ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation spec... 74 4e-13
ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation spec... 76 4e-13
ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 74 8e-13
ref|XP_006574817.1| PREDICTED: cleavage and polyadenylation spec... 80 9e-13
ref|XP_006574816.1| PREDICTED: cleavage and polyadenylation spec... 80 9e-13
gb|EMJ26328.1| hypothetical protein PRUPE_ppa002557mg [Prunus pe... 74 1e-12
ref|XP_002875087.1| hypothetical protein ARALYDRAFT_322516 [Arab... 70 1e-12
gb|AAS80153.1| ACT11D09.9 [Cucumis melo] 79 2e-12
ref|XP_006395858.1| hypothetical protein EUTSA_v10005303mg [Eutr... 70 2e-12
ref|XP_006661200.1| PREDICTED: cleavage and polyadenylation spec... 71 2e-12
gb|AAD12712.1| putative cleavage and polyadenylation specifity f... 68 8e-12
>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Cucumis sativus]
Length = 649
Score = 78.2 bits (191), Expect(2) = 6e-15
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHIS 5
G+ GKSCVVVTINGKRIM DCGMH+GY+DHRRYPDFS IS
Sbjct: 11 GQEVGKSCVVVTINGKRIMFDCGMHLGYVDHRRYPDFSRIS 51
Score = 29.6 bits (65), Expect(2) = 6e-15
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
MAIDC LGAGQEVG+
Sbjct: 1 MAIDCLVLGAGQEVGK 16
>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 76.3 bits (186), Expect(2) = 6e-14
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHIS 5
G+ GKSC VVTINGKRIM DCGMHMGYLDHRR+PDFS IS
Sbjct: 11 GQEVGKSCAVVTINGKRIMFDCGMHMGYLDHRRFPDFSLIS 51
Score = 28.1 bits (61), Expect(2) = 6e-14
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
MAI+C LGAGQEVG+
Sbjct: 1 MAIECLVLGAGQEVGK 16
>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223534732|gb|EEF36424.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 76.3 bits (186), Expect(2) = 6e-14
Identities = 35/41 (85%), Positives = 36/41 (87%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHIS 5
G+ GKSCVVVTINGKRIM DCGMHMGY DHRRYPDFS IS
Sbjct: 11 GQEVGKSCVVVTINGKRIMFDCGMHMGYDDHRRYPDFSLIS 51
Score = 28.1 bits (61), Expect(2) = 6e-14
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
MAI+C LGAGQEVG+
Sbjct: 1 MAIECLVLGAGQEVGK 16
>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
Length = 686
Score = 76.3 bits (186), Expect(2) = 6e-14
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHIS 5
G+ GKSC VVTINGKRIM DCGMHMGYLDHRR+PDFS IS
Sbjct: 11 GQEVGKSCAVVTINGKRIMFDCGMHMGYLDHRRFPDFSLIS 51
Score = 28.1 bits (61), Expect(2) = 6e-14
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
MAI+C LGAGQEVG+
Sbjct: 1 MAIECLVLGAGQEVGK 16
>ref|XP_002314781.2| metallo-beta-lactamase family protein [Populus trichocarpa]
gi|550329586|gb|EEF00952.2| metallo-beta-lactamase
family protein [Populus trichocarpa]
Length = 625
Score = 76.3 bits (186), Expect(2) = 6e-14
Identities = 35/41 (85%), Positives = 36/41 (87%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHIS 5
G+ GKSCVVVTINGKRIM DCGMHMGY DHRRYPDFS IS
Sbjct: 11 GQEVGKSCVVVTINGKRIMFDCGMHMGYDDHRRYPDFSLIS 51
Score = 28.1 bits (61), Expect(2) = 6e-14
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
MAI+C LGAGQEVG+
Sbjct: 1 MAIECLVLGAGQEVGK 16
>gb|EXB32338.1| Cleavage and polyadenylation specificity factor subunit 3-II [Morus
notabilis]
Length = 375
Score = 74.7 bits (182), Expect(2) = 6e-14
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHI 8
G+ GKSCVVV+INGKRIM DCGMHMG+LDHRRYPDFS I
Sbjct: 11 GQEVGKSCVVVSINGKRIMFDCGMHMGFLDHRRYPDFSLI 50
Score = 29.6 bits (65), Expect(2) = 6e-14
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
MAIDC LGAGQEVG+
Sbjct: 1 MAIDCLVLGAGQEVGK 16
>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Citrus sinensis]
Length = 1019
Score = 73.9 bits (180), Expect(2) = 1e-13
Identities = 33/41 (80%), Positives = 35/41 (85%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHIS 5
G+ GKSCVVVTINGKRIM DCGMHM Y DHR+YPDFS IS
Sbjct: 11 GQEVGKSCVVVTINGKRIMFDCGMHMAYNDHRQYPDFSRIS 51
Score = 29.6 bits (65), Expect(2) = 1e-13
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
MAIDC LGAGQEVG+
Sbjct: 1 MAIDCLVLGAGQEVGK 16
>ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citrus clementina]
gi|557550770|gb|ESR61399.1| hypothetical protein
CICLE_v10014563mg [Citrus clementina]
Length = 646
Score = 73.9 bits (180), Expect(2) = 1e-13
Identities = 33/41 (80%), Positives = 35/41 (85%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHIS 5
G+ GKSCVVVTINGKRIM DCGMHM Y DHR+YPDFS IS
Sbjct: 11 GQEVGKSCVVVTINGKRIMFDCGMHMAYNDHRQYPDFSRIS 51
Score = 29.6 bits (65), Expect(2) = 1e-13
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
MAIDC LGAGQEVG+
Sbjct: 1 MAIDCLVLGAGQEVGK 16
>gb|EOY01103.1| Cleavage and polyadenylation specificity factor 73 kDa subunit-II
[Theobroma cacao]
Length = 657
Score = 72.4 bits (176), Expect(2) = 3e-13
Identities = 33/41 (80%), Positives = 35/41 (85%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHIS 5
G+ GKSCVVV+INGKRIM DCGMHMGY D RRYPDFS IS
Sbjct: 11 GQEVGKSCVVVSINGKRIMFDCGMHMGYTDSRRYPDFSLIS 51
Score = 29.6 bits (65), Expect(2) = 3e-13
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
MAIDC LGAGQEVG+
Sbjct: 1 MAIDCLVLGAGQEVGK 16
>ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Solanum lycopersicum]
Length = 1043
Score = 73.6 bits (179), Expect(2) = 4e-13
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHIS 5
G+ GKSCVVVTINGKRIM DCGMHMG+ DH+RYPDFS IS
Sbjct: 11 GQEVGKSCVVVTINGKRIMFDCGMHMGHSDHQRYPDFSLIS 51
Score = 28.1 bits (61), Expect(2) = 4e-13
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
M IDC LGAGQEVG+
Sbjct: 1 MTIDCLVLGAGQEVGK 16
>ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Fragaria vesca subsp. vesca]
Length = 1009
Score = 75.9 bits (185), Expect(2) = 4e-13
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHIS 5
G+ GKSCV+VTINGKRIM DCGMHMG+LDHRRYPDFS I+
Sbjct: 11 GQEVGKSCVIVTINGKRIMFDCGMHMGHLDHRRYPDFSLIN 51
Score = 25.8 bits (55), Expect(2) = 4e-13
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
MAID LGAGQEVG+
Sbjct: 1 MAIDSLVLGAGQEVGK 16
>ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like [Solanum tuberosum]
Length = 948
Score = 73.6 bits (179), Expect(2) = 8e-13
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHIS 5
G+ GKSCVVVTINGKRIM DCGMHMG+ DHRRYPDFS IS
Sbjct: 11 GQDVGKSCVVVTINGKRIMFDCGMHMGHDDHRRYPDFSLIS 51
Score = 26.9 bits (58), Expect(2) = 8e-13
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
M IDC LGAGQ+VG+
Sbjct: 1 MTIDCLVLGAGQDVGK 16
>ref|XP_006574817.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like isoform X2 [Glycine max]
Length = 528
Score = 80.1 bits (196), Expect = 9e-13
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = -1
Query: 151 LTVLFWAQGKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHISP 2
+ L G+ GKSCVVVTIN KRIM DCGMHMGYLDHRRYPDF+ ISP
Sbjct: 3 IETLVLGAGQEVGKSCVVVTINAKRIMFDCGMHMGYLDHRRYPDFTRISP 52
>ref|XP_006574816.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like isoform X1 [Glycine max]
Length = 532
Score = 80.1 bits (196), Expect = 9e-13
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = -1
Query: 151 LTVLFWAQGKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHISP 2
+ L G+ GKSCVVVTIN KRIM DCGMHMGYLDHRRYPDF+ ISP
Sbjct: 3 IETLVLGAGQEVGKSCVVVTINAKRIMFDCGMHMGYLDHRRYPDFTRISP 52
>gb|EMJ26328.1| hypothetical protein PRUPE_ppa002557mg [Prunus persica]
Length = 658
Score = 74.3 bits (181), Expect(2) = 1e-12
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHI 8
G+ GKSCVVVTINGKRIM DCGMHMG+LDH+RYPDFS I
Sbjct: 11 GQEVGKSCVVVTINGKRIMFDCGMHMGHLDHQRYPDFSLI 50
Score = 25.8 bits (55), Expect(2) = 1e-12
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
MAID LGAGQEVG+
Sbjct: 1 MAIDSLVLGAGQEVGK 16
>ref|XP_002875087.1| hypothetical protein ARALYDRAFT_322516 [Arabidopsis lyrata subsp.
lyrata] gi|297320925|gb|EFH51346.1| hypothetical protein
ARALYDRAFT_322516 [Arabidopsis lyrata subsp. lyrata]
Length = 819
Score = 70.5 bits (171), Expect(2) = 1e-12
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHIS 5
G+ GKSCVVVTINGKRIM DCGMHMG DH RYPDFS +S
Sbjct: 11 GQEIGKSCVVVTINGKRIMFDCGMHMGCDDHNRYPDFSLVS 51
Score = 29.3 bits (64), Expect(2) = 1e-12
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
MAIDC LGAGQE+G+
Sbjct: 1 MAIDCLVLGAGQEIGK 16
>gb|AAS80153.1| ACT11D09.9 [Cucumis melo]
Length = 708
Score = 79.3 bits (194), Expect = 2e-12
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = -1
Query: 142 LFWAQGKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHIS 5
+F G+ GKSCVVVTINGKRIM DCGMH+GY+DHRRYPDFS IS
Sbjct: 38 VFGRAGQEVGKSCVVVTINGKRIMFDCGMHLGYVDHRRYPDFSRIS 83
>ref|XP_006395858.1| hypothetical protein EUTSA_v10005303mg [Eutrema salsugineum]
gi|557092497|gb|ESQ33144.1| hypothetical protein
EUTSA_v10005303mg [Eutrema salsugineum]
Length = 617
Score = 70.1 bits (170), Expect(2) = 2e-12
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHIS 5
G+ GKSCVVVTINGKRIM DCGMHMG DH RYPDFS +S
Sbjct: 11 GQEIGKSCVVVTINGKRIMFDCGMHMGCDDHNRYPDFSLLS 51
Score = 29.3 bits (64), Expect(2) = 2e-12
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
MAIDC LGAGQE+G+
Sbjct: 1 MAIDCLVLGAGQEIGK 16
>ref|XP_006661200.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Oryza brachyantha]
Length = 545
Score = 71.2 bits (173), Expect(2) = 2e-12
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHI 8
G+ GKSCVVVTI GKR+M DCGMHMGY DHRRYPDF +
Sbjct: 11 GQEVGKSCVVVTIGGKRVMFDCGMHMGYHDHRRYPDFPRV 50
Score = 28.1 bits (61), Expect(2) = 2e-12
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
MAI+C LGAGQEVG+
Sbjct: 1 MAIECLVLGAGQEVGK 16
>gb|AAD12712.1| putative cleavage and polyadenylation specifity factor [Arabidopsis
thaliana]
Length = 837
Score = 67.8 bits (164), Expect(2) = 8e-12
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = -1
Query: 127 GKRWGKSCVVVTINGKRIMVDCGMHMGYLDHRRYPDFSHIS 5
G+ GKSCVVVTINGK+IM DCGMHMG DH RYP+FS IS
Sbjct: 11 GQEIGKSCVVVTINGKKIMFDCGMHMGCDDHNRYPNFSLIS 51
Score = 29.3 bits (64), Expect(2) = 8e-12
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3
Query: 158 MAIDCPFLGAGQEVGE 111
MAIDC LGAGQE+G+
Sbjct: 1 MAIDCLVLGAGQEIGK 16