BLASTX nr result

ID: Rauwolfia21_contig00016998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00016998
         (350 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   150   2e-34
gb|AAC12735.1| putative retrovirus-related polyprotein [Lithospe...   149   3e-34
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   148   8e-34
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   145   4e-33
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...   144   1e-32
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         144   1e-32
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        144   1e-32
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]           144   1e-32
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc...   144   1e-32
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     144   1e-32
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...   144   2e-32
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   143   2e-32
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   143   2e-32
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   143   3e-32
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   143   3e-32
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   142   3e-32
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           142   3e-32
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   142   5e-32
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]           142   5e-32
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc...   142   6e-32

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  150 bits (379), Expect = 2e-34
 Identities = 67/116 (57%), Positives = 82/116 (70%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           H+RLGH GE+ +Q L+K+ LL G K   LEFCEHCV GK HR KF  AIH TKG LDY+H
Sbjct: 415 HIRLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIH 474

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQTG 350
           SD WGP    SLGG  +FV+ +DD+SR  WV+ MK+K E  + F +WK  +ENQTG
Sbjct: 475 SDCWGPCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTG 530


>gb|AAC12735.1| putative retrovirus-related polyprotein [Lithospermum
           erythrorhizon]
          Length = 244

 Score =  149 bits (377), Expect = 3e-34
 Identities = 66/116 (56%), Positives = 87/116 (75%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH  EK L  L+ QGLLK  K   +EFCEH V GK HR+KF T+ H ++G+LDYVH
Sbjct: 112 HMRLGHMSEKGLSLLSGQGLLKNMKKSCMEFCEHWVYGKTHRLKFFTSKHKSRGLLDYVH 171

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQTG 350
           +D+WGPA   S  G +YFVTFVDD+SR  W++ +K+K+EV ++F +W+A VEN+TG
Sbjct: 172 TDLWGPAKVNSKDGSWYFVTFVDDYSRYAWIYFLKHKNEVFDIFKQWRAMVENRTG 227


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  148 bits (373), Expect = 8e-34
 Identities = 67/116 (57%), Positives = 83/116 (71%)
 Frame = +3

Query: 3    HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
            H RLGH  EK L  L+KQGLL G +T KL+FCE CV+GKQ RVKF    H T G+L+Y+H
Sbjct: 749  HRRLGHMSEKGLSILSKQGLLSGAETGKLKFCETCVMGKQRRVKFSMGSHTTNGVLEYIH 808

Query: 183  SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQTG 350
            SD+WGP+   S  G  Y+VTF+DDFSR+VWV+ +K KDEV   F +WK  VE +TG
Sbjct: 809  SDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTG 864


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  145 bits (367), Expect = 4e-33
 Identities = 67/75 (89%), Positives = 68/75 (90%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGHAGEKSLQ   KQGLLKGTK CKLEFCEHCVLGKQ RVKFGTAIHNTKGILDYVH
Sbjct: 362 HMRLGHAGEKSLQIFTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVH 421

Query: 183 SDVWGPANTPSLGGR 227
           SDVWGPA TPS+G R
Sbjct: 422 SDVWGPAKTPSIGVR 436


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score =  144 bits (363), Expect = 1e-32
 Identities = 65/115 (56%), Positives = 81/115 (70%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH  E  L  L+K+GLL G    KL+FCEHC+ GK  RVKF T+ H T+GILDYVH
Sbjct: 398 HMRLGHMSEIGLAELSKRGLLDGQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 457

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQT 347
           SD+WGPA   S GG  Y +T VDD+SR+VW + +K+K +  +VF +WK  VE QT
Sbjct: 458 SDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 512


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  144 bits (363), Expect = 1e-32
 Identities = 65/115 (56%), Positives = 81/115 (70%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH  E  L  L+K+GLL G    KL+FCEHC+ GK  RVKF T+ H T+GILDYVH
Sbjct: 269 HMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 328

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQT 347
           SD+WGPA   S GG  Y +T VDD+SR+VW + +K+K +  +VF +WK  VE QT
Sbjct: 329 SDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 383


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  144 bits (363), Expect = 1e-32
 Identities = 65/115 (56%), Positives = 80/115 (69%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH  E  L  L+K+GLL G    KL+FCEHC+ GK  RVKF T+ H T+GILDYVH
Sbjct: 437 HMRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 496

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQT 347
           SD+WGPA   S GG  Y +T VDD+SR+VW + +K+K +   VF +WK  VE QT
Sbjct: 497 SDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQT 551


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score =  144 bits (363), Expect = 1e-32
 Identities = 65/115 (56%), Positives = 81/115 (70%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH  E  L  L+K+GLL G    KL+FCEHC+ GK  RVKF T+ H T+GILDYVH
Sbjct: 269 HMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 328

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQT 347
           SD+WGPA   S GG  Y +T VDD+SR+VW + +K+K +  +VF +WK  VE QT
Sbjct: 329 SDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 383


>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1262

 Score =  144 bits (363), Expect = 1e-32
 Identities = 65/115 (56%), Positives = 81/115 (70%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH  E  L  L+K+GLL G    KL+FCEHC+ GK  RVKF T+ H T+GILDYVH
Sbjct: 452 HMRLGHMSEIGLAELSKRGLLDGQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 511

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQT 347
           SD+WGPA   S GG  Y +T VDD+SR+VW + +K+K +  +VF +WK  VE QT
Sbjct: 512 SDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 566


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  144 bits (363), Expect = 1e-32
 Identities = 65/115 (56%), Positives = 81/115 (70%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH  E  L  L+K+GLL G    KL+FCEHC+ GK  RVKF T+ H T+GILDYVH
Sbjct: 346 HMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 405

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQT 347
           SD+WGPA   S GG  Y +T VDD+SR+VW + +K+K +  +VF +WK  VE QT
Sbjct: 406 SDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 460


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score =  144 bits (362), Expect = 2e-32
 Identities = 65/115 (56%), Positives = 81/115 (70%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH  E  L  L+K+GLL G    KL+FCEHC+ GK  RVKF T+ H T+GILDYVH
Sbjct: 403 HMRLGHMSEIGLAELSKRGLLYGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 462

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQT 347
           SD+WGPA   S GG  Y +T VDD+SR+VW + +K+K +  +VF +WK  VE QT
Sbjct: 463 SDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 517


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77548751|gb|ABA91548.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 2340

 Score =  143 bits (361), Expect = 2e-32
 Identities = 65/115 (56%), Positives = 81/115 (70%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH  E  L  L+K+GLL G    KL+FCEHC+ GK  RVKF T+ H T+GILDYVH
Sbjct: 644 HMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 703

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQT 347
           SD+WGPA   S GG  Y +T VDD+SR+VW + +K+K +  +VF +WK  VE QT
Sbjct: 704 SDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 758


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  143 bits (361), Expect = 2e-32
 Identities = 65/115 (56%), Positives = 81/115 (70%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH  E  L  L+K+GLL G    KL+FCEHC+ GK  RVKF T+ H T+GILDYVH
Sbjct: 437 HMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVH 496

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQT 347
           SD+WGPA   S GG  Y +T VDD+SR+VW + +K+K +  +VF +WK  VE QT
Sbjct: 497 SDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 551


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  143 bits (360), Expect = 3e-32
 Identities = 59/115 (51%), Positives = 80/115 (69%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH     +  L K+ LLKG  + K++FCEHC+ GK  RV+F T++H TKG LDYVH
Sbjct: 429 HMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVH 488

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQT 347
           +D+WGP+  PSLGG  Y +T +DD+SR+VW + +K+KD+    F  WK  +E QT
Sbjct: 489 ADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQT 543


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549942|gb|ABA92739.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1373

 Score =  143 bits (360), Expect = 3e-32
 Identities = 59/115 (51%), Positives = 80/115 (69%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH     +  L K+ LLKG  + K++FCEHC+ GK  RV+F T++H TKG LDYVH
Sbjct: 429 HMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVH 488

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQT 347
           +D+WGP+  PSLGG  Y +T +DD+SR+VW + +K+KD+    F  WK  +E QT
Sbjct: 489 ADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQT 543


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  142 bits (359), Expect = 3e-32
 Identities = 59/115 (51%), Positives = 80/115 (69%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH     +  L K+ LLKG  + K++FCEHC+ GK  RV+F T++H TKG LDYVH
Sbjct: 429 HMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVH 488

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQT 347
           +D+WGP+  PSLGG  Y +T +DD+SR+VW + +K+KD+    F  WK  +E QT
Sbjct: 489 ADLWGPSKKPSLGGARYMLTVIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQT 543


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  142 bits (359), Expect = 3e-32
 Identities = 59/115 (51%), Positives = 80/115 (69%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH     +  L K+ LLKG  + K++FCEHC+ GK  RV+F T++H TKG LDYVH
Sbjct: 431 HMRLGHMSHLGMTELMKRNLLKGYTSSKIKFCEHCIFGKHKRVQFNTSVHTTKGTLDYVH 490

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQT 347
           +D+WGP+  PSLGG  Y +T +DD+SR+VW + +K+KD+    F  WK  +E QT
Sbjct: 491 ADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQT 545


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  142 bits (358), Expect = 5e-32
 Identities = 66/115 (57%), Positives = 80/115 (69%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH  E  L  L+K+GLL G    KL+FCEHC+ GK  RVKF T+ H T+GILDYVH
Sbjct: 376 HMRLGHMSEIGLAELSKRGLLDGQNIGKLKFCEHCIFGKHKRVKFTTSTHTTEGILDYVH 435

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQT 347
           SD+WGPA   S GG  Y +T VDD+SR+VW + +K+K E   VF +WK  VE QT
Sbjct: 436 SDLWGPARKRSFGGARYMMTIVDDYSRKVWPYFLKHKFEAFLVFKEWKTMVERQT 490


>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
          Length = 1009

 Score =  142 bits (358), Expect = 5e-32
 Identities = 63/115 (54%), Positives = 80/115 (69%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH  E  L  L+K+G+L G    KL FCEHC+ GK HRVKF T+ H T+GILDYVH
Sbjct: 258 HMRLGHMSEIGLAELSKRGMLDGQSIGKLIFCEHCIFGKHHRVKFNTSTHTTEGILDYVH 317

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQT 347
           SD+WGP    S GG  Y +T +DD+SR+VW + +K+K +  +VF +WK  VE QT
Sbjct: 318 SDLWGPTCKTSFGGARYMMTIIDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQT 372


>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1156

 Score =  142 bits (357), Expect = 6e-32
 Identities = 60/115 (52%), Positives = 80/115 (69%)
 Frame = +3

Query: 3   HMRLGHAGEKSLQTLAKQGLLKGTKTCKLEFCEHCVLGKQHRVKFGTAIHNTKGILDYVH 182
           HMRLGH  E  +  L K+ LL G     ++FCEHCV GK  RVKF T++H +KGILDYVH
Sbjct: 370 HMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVKFNTSVHRSKGILDYVH 429

Query: 183 SDVWGPANTPSLGGRYYFVTFVDDFSRRVWVFPMKNKDEVLEVFLKWKAEVENQT 347
           +D+WGP+  PSLGG  Y +T +DD+SR+VW + +K+KD+    F +WK  +E QT
Sbjct: 430 ADLWGPSRKPSLGGACYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIERQT 484


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