BLASTX nr result

ID: Rauwolfia21_contig00016913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00016913
         (660 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004235781.1| PREDICTED: geranylgeranyl transferase type-2...    59   2e-06

>ref|XP_004235781.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta-like
           [Solanum lycopersicum]
          Length = 313

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 35/77 (45%), Positives = 37/77 (48%)
 Frame = +2

Query: 80  ISKEKLVRFILDCQVSQLICHYQLEIFSILVERVALIFKQLVLVSWMLDKGNGGISDRPE 259
           I K KLV+FILDCQ                                  DK NGGISDRP+
Sbjct: 244 IDKGKLVKFILDCQ----------------------------------DKENGGISDRPD 269

Query: 260 DVVDVFHTYFGVTGKSL 310
           D VDVFHTYFGV G SL
Sbjct: 270 DAVDVFHTYFGVAGLSL 286


Top