BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00016563
         (1049 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22121.1| polyprotein [Solanum melongena]                        299   1e-78
gb|ABG22123.1| polyprotein [Prunus avium]                             280   9e-73
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]          244   5e-62
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   214   3e-53
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     212   2e-52
emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]                210   9e-52
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa...   209   1e-51
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]         209   1e-51
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc...   208   3e-51
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     208   3e-51
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   207   4e-51
gb|AFB73911.1| polyprotein [Citrus sinensis]                          207   6e-51
gb|AFB73912.1| polyprotein [Citrus sinensis]                          206   1e-50
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           206   1e-50
gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus]         206   1e-50
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   206   2e-50
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   205   2e-50
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              205   2e-50
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              205   2e-50
emb|CAD40782.2| OSJNBb0012E08.6 [Oryza sativa Japonica Group]         205   2e-50

>gb|ABG22121.1| polyprotein [Solanum melongena]
          Length = 361

 Score =  299 bits (765), Expect = 1e-78
 Identities = 144/165 (87%), Positives = 155/165 (93%)
 Frame = +2

Query: 554  TDEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYI 733
            TDEEREYMAKVPYANAVGSLMYAMVCTR DISQAVS+VSRYMHDPGKGHWQAVKWILRYI
Sbjct: 178  TDEEREYMAKVPYANAVGSLMYAMVCTRSDISQAVSVVSRYMHDPGKGHWQAVKWILRYI 237

Query: 734  QNTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTV 913
            +NTVD+GLVFE+D++ G  VVGYCDSDYAGDLDKRRSTTGYLFT AK PVSWKSTLQ+TV
Sbjct: 238  KNTVDIGLVFEQDKSLGSCVVGYCDSDYAGDLDKRRSTTGYLFTLAKGPVSWKSTLQATV 297

Query: 914  ALSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            ALSTTEAEYMA+TEAVKEAIWL GLL++LGVGQKH+ V  DSQSA
Sbjct: 298  ALSTTEAEYMAITEAVKEAIWLHGLLEELGVGQKHLMVHSDSQSA 342


>gb|ABG22123.1| polyprotein [Prunus avium]
          Length = 276

 Score =  280 bits (715), Expect = 9e-73
 Identities = 134/165 (81%), Positives = 150/165 (90%)
 Frame = +2

Query: 554  TDEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYI 733
            TDEE  YMA++PYA+AVGSLMYAMVCTRPDISQAVSIVSRYMH+PGKGHWQAVKWILRYI
Sbjct: 93   TDEESHYMAQIPYASAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYI 152

Query: 734  QNTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTV 913
              TVDVGL+F++D+  G+ VVGY DSDYAGDLDKRRSTTG++FT A  PVSW+S LQSTV
Sbjct: 153  LGTVDVGLLFQQDKVSGQCVVGYVDSDYAGDLDKRRSTTGFVFTIAGGPVSWRSILQSTV 212

Query: 914  ALSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            ALSTTEAEYMAVTEA+KEAIWLQGLL DLGV Q H++V+CDSQSA
Sbjct: 213  ALSTTEAEYMAVTEAIKEAIWLQGLLDDLGVQQDHVDVYCDSQSA 257


>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score =  244 bits (622), Expect = 5e-62
 Identities = 119/165 (72%), Positives = 142/165 (86%)
 Frame = +2

Query: 554  TDEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYI 733
            + EER+YMA VPYA+ VGSL+YAMVCTRPDISQAVS+VSRYMH+PGK  W AVKWILRY+
Sbjct: 66   SQEERDYMACVPYASVVGSLIYAMVCTRPDISQAVSMVSRYMHNPGKSQWLAVKWILRYL 125

Query: 734  QNTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTV 913
              TVDVGL+F+++   G+  VGYCDSD+AGDLDK+RST+GY+FT     VSW+S LQST+
Sbjct: 126  YGTVDVGLLFKKN--CGQQCVGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQSTI 183

Query: 914  ALSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            ALSTTEAEY+A TEAVKEAIWL+GLL DLGV Q++I VFCD+QSA
Sbjct: 184  ALSTTEAEYIAATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSA 228


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  214 bits (546), Expect = 3e-53
 Identities = 105/165 (63%), Positives = 129/165 (78%)
 Frame = +2

Query: 554  TDEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYI 733
            ++EE+EYM++VPYA+AVGSLMYAMVCTRPD++ AVS+VSR+M  PG+ HWQAVK I RY+
Sbjct: 1080 SEEEKEYMSRVPYASAVGSLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYL 1139

Query: 734  QNTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTV 913
            + T DVGL++  D      V GY DSDYAGD+D RRS TGY+FT   + VSWK+TLQ TV
Sbjct: 1140 RGTSDVGLIYGGDTQCL--VTGYSDSDYAGDVDTRRSMTGYVFTLGGSVVSWKATLQPTV 1197

Query: 914  ALSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
             LSTTEAEYMA+TEA KE IWL+GL+ DLG+      V+CDS SA
Sbjct: 1198 TLSTTEAEYMALTEAAKEGIWLKGLVSDLGLHHDQATVYCDSLSA 1242


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  212 bits (540), Expect = 2e-52
 Identities = 102/163 (62%), Positives = 129/163 (79%)
 Frame = +2

Query: 560  EEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYIQN 739
            +E + M  VPYA+AVG LMYAM+CTRPD++QA+S+VS+YM +PGK HW+AVKWI +Y++N
Sbjct: 1073 KEIDMMKNVPYASAVGCLMYAMICTRPDLAQAMSVVSKYMSNPGKRHWEAVKWIFKYLKN 1132

Query: 740  TVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTVAL 919
            T  +G++FER +     V G+ DSD+AGDLD+RRST GY+FT    PVSWK+TLQ+  AL
Sbjct: 1133 TRQLGIMFERRQGEAC-VAGFVDSDFAGDLDRRRSTAGYVFTCGGGPVSWKATLQAVTAL 1191

Query: 920  STTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            STTEAEYMA+TEA KEAIWL GL   LGV Q+ + V CDSQSA
Sbjct: 1192 STTEAEYMALTEASKEAIWLNGLAGQLGVHQEGVVVKCDSQSA 1234


>emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]
          Length = 293

 Score =  210 bits (534), Expect = 9e-52
 Identities = 101/165 (61%), Positives = 127/165 (76%)
 Frame = +2

Query: 554  TDEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYI 733
            TDE+ EYM++VPY++AVGSLMYAMVC+RPD+S A+S+VSRYM +PGK HW+A+ WI RY+
Sbjct: 65   TDEDVEYMSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMTNPGKEHWKAIHWIFRYL 124

Query: 734  QNTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTV 913
            + T D  L F R +   +G+VGY DSD+A DLDKRRS TGY+FT     VSWK+TLQ  V
Sbjct: 125  RGTTDACLKFGRTD---KGLVGYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQPIV 181

Query: 914  ALSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            A STTEAEYMA+ EA KE++WL+GL  +L      I +FCDSQSA
Sbjct: 182  AQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSA 226


>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
            gi|18542925|gb|AAL75759.1| Putative pol polyprotein
            [Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1005

 Score =  209 bits (533), Expect = 1e-51
 Identities = 101/165 (61%), Positives = 129/165 (78%)
 Frame = +2

Query: 554  TDEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYI 733
            TDE+ EYM++VPY++AVGSLMYAMVC+RPD+S A+S+VSRYM +PGK HW+AV+WI RY+
Sbjct: 777  TDEDVEYMSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYL 836

Query: 734  QNTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTV 913
            + T D  L F R +   +G+VGY DSD+A DLDKRRS TGY+FT +   +SWK+TLQ  V
Sbjct: 837  RGTADACLKFGRTD---KGLVGYVDSDFAADLDKRRSLTGYVFTISSCAMSWKATLQPVV 893

Query: 914  ALSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            A STTEAEYMA+ EA KE++WL+GL  +L      I +FCDSQSA
Sbjct: 894  AQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCIILFCDSQSA 938


>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1363

 Score =  209 bits (532), Expect = 1e-51
 Identities = 99/162 (61%), Positives = 123/162 (75%)
 Frame = +2

Query: 563  EREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYIQNT 742
            E EYM  VPY++AVGS+MYAM+ TRPD++  V +VSR+M  P K HW  VKW+LRYI+ T
Sbjct: 1136 EEEYMNSVPYSSAVGSIMYAMIGTRPDLAYPVGVVSRFMSQPAKEHWLGVKWVLRYIKGT 1195

Query: 743  VDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTVALS 922
            VD  L ++R+  F   + GYCD+DYA DLDKRRS TG +FT     +SWKS LQ  VA S
Sbjct: 1196 VDTRLCYKRNSDFS--ICGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRVVAQS 1253

Query: 923  TTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            +TE EYM++TEAVKEAIWL+GLLKD G  QK++E+FCDSQSA
Sbjct: 1254 STECEYMSLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQSA 1295


>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1156

 Score =  208 bits (529), Expect = 3e-51
 Identities = 100/165 (60%), Positives = 127/165 (76%)
 Frame = +2

Query: 554  TDEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYI 733
            TDE+ EYM++VPY++AVGSLMYAMVC+RPD+S A+S+VSRYM +PGK HW+AV+WI RY+
Sbjct: 944  TDEDVEYMSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYL 1003

Query: 734  QNTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTV 913
            +   D  L F R +   +G+VGY DSD+A DLDKRRS TGY+FT     +SWK+TLQ  V
Sbjct: 1004 KGIADACLKFGRTD---KGLVGYVDSDFAADLDKRRSLTGYVFTIGSCAMSWKATLQPVV 1060

Query: 914  ALSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            A STTEAEYMA+ EA KE++WL+GL  +L      I +FCDSQSA
Sbjct: 1061 AQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSA 1105


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  208 bits (529), Expect = 3e-51
 Identities = 102/165 (61%), Positives = 128/165 (77%)
 Frame = +2

Query: 554  TDEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYI 733
            +D + EYM++VPY++AVGSLMYAMVC RPD+S A+S+V+RYM +PGK HW+AV+WI RY+
Sbjct: 1076 SDYDIEYMSRVPYSSAVGSLMYAMVCCRPDLSHALSVVNRYMANPGKEHWKAVQWIFRYL 1135

Query: 734  QNTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTV 913
            + T    L FER      G+VGY DSD+AGDLD+RRS TGY+FT     VSWK++LQ+TV
Sbjct: 1136 RGTSSACLQFERSRD---GLVGYVDSDFAGDLDRRRSITGYVFTIGGCAVSWKASLQATV 1192

Query: 914  ALSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            ALSTTEAEYMA+ EA KEAIWL+GL  +L      I +FCDSQSA
Sbjct: 1193 ALSTTEAEYMAIFEACKEAIWLRGLYTELCGVTSCINIFCDSQSA 1237


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53370655|gb|AAU89150.1| integrase core domain
            containing protein [Oryza sativa Japonica Group]
            gi|108710286|gb|ABF98081.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1322

 Score =  207 bits (528), Expect = 4e-51
 Identities = 101/165 (61%), Positives = 127/165 (76%)
 Frame = +2

Query: 554  TDEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYI 733
            TDE+ EYM++VPY++AVGSLMYAMVC+ PD+S A+S+VSRYM +PGK HW+AV+WI RY+
Sbjct: 1094 TDEDVEYMSRVPYSSAVGSLMYAMVCSWPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYL 1153

Query: 734  QNTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTV 913
            + T D  L F R +   +G+VGY DSD+A DLDKRRS TGY+FT     VSWK+TLQ  V
Sbjct: 1154 RGTADACLKFGRID---KGLVGYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQPVV 1210

Query: 914  ALSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            A STTEAEYMA+ EA KE++WL+GL  +L      I +FCDSQSA
Sbjct: 1211 AQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSA 1255


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  207 bits (527), Expect = 6e-51
 Identities = 107/164 (65%), Positives = 129/164 (78%)
 Frame = +2

Query: 557  DEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYIQ 736
            + ER+ M++VPYA+AVGSLM+AM+CTRPDI+QAV +VSRYM +PG  HW AVK ILRYI+
Sbjct: 1081 EAERKEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGGEHWIAVKRILRYIR 1140

Query: 737  NTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTVA 916
             T DV L +   E   RG   Y DSD+AGDLDKR+STTGY+FT A A VSW S LQ+ VA
Sbjct: 1141 GTSDVALCYGGSEFTVRG---YVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVA 1197

Query: 917  LSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            LSTTEAEYMA T+A K+AIW+Q LL++LG  Q+ I VFCDSQSA
Sbjct: 1198 LSTTEAEYMAATQACKKAIWIQRLLEELGHKQQKILVFCDSQSA 1241


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  206 bits (524), Expect = 1e-50
 Identities = 107/164 (65%), Positives = 128/164 (78%)
 Frame = +2

Query: 557  DEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYIQ 736
            + ER+ M++VPYA+AVGSLM+AM+CTRPDI+QAV  VSRYM +PG  HW AVK ILRYI+
Sbjct: 1081 EAERKEMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGGEHWIAVKRILRYIR 1140

Query: 737  NTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTVA 916
             T +V L +   E   RG   Y DSD+AGDLDKR+STTGY+FT A A VSW S LQ+ VA
Sbjct: 1141 GTSNVALCYGGSEFTVRG---YVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQTVVA 1197

Query: 917  LSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            LSTTEAEYMA T+A KEAIW+Q LL++LG  Q+ I VFCDSQSA
Sbjct: 1198 LSTTEAEYMAATQACKEAIWIQRLLEELGHKQQKIPVFCDSQSA 1241


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  206 bits (524), Expect = 1e-50
 Identities = 100/165 (60%), Positives = 127/165 (76%)
 Frame = +2

Query: 554  TDEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYI 733
            TD E EYM++VPY++AVGSLMYAMVC+RPD+S A+S+VSRYM +PGK HW+A++WI RY+
Sbjct: 1107 TDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRALQWIFRYL 1166

Query: 734  QNTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTV 913
            + T    L F R +   +G++GY DSDYA DLD+RRS TGY+FT     VSW++TLQS V
Sbjct: 1167 RGTTYSCLKFGRTD---KGLIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVV 1223

Query: 914  ALSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            ALSTTEAEYMA+ EA KE IWL+GL  +L   +  I + CDSQSA
Sbjct: 1224 ALSTTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSQSA 1268


>gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 358

 Score =  206 bits (524), Expect = 1e-50
 Identities = 101/168 (60%), Positives = 129/168 (76%), Gaps = 3/168 (1%)
 Frame = +2

Query: 554  TDEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYI 733
            ++EE+EYM++VPY++AVGSLMYAM+CTRPD++ AVS+VSRYM +PG+ HW+AV+W+LRY+
Sbjct: 177  SNEEKEYMSRVPYSSAVGSLMYAMICTRPDLAYAVSMVSRYMANPGREHWKAVQWVLRYL 236

Query: 734  QNTVDVGLVF--ERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQS 907
              T D  + F   RD     GV GY DSDY GDLD RRS TGY+FT     +SWK+ LQ 
Sbjct: 237  SGTRDYCMCFGTSRD-----GVQGYVDSDYGGDLDGRRSLTGYVFTMGSCAISWKAVLQP 291

Query: 908  TVALSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIE-VFCDSQSA 1048
            TVA+STTEAEYMA+TE  KEAIWL+GL K L   +  ++ VFCD+QSA
Sbjct: 292  TVAVSTTEAEYMAITEGFKEAIWLKGLFKSLSGDELTVDSVFCDNQSA 339


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  206 bits (523), Expect = 2e-50
 Identities = 100/165 (60%), Positives = 126/165 (76%)
 Frame = +2

Query: 554  TDEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYI 733
            TD E EYM++VPY++AVGSLMYAMVC+RPD+S A+S+VSRYM +PGK HW+ V+WI RY+
Sbjct: 1105 TDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRVVQWIFRYL 1164

Query: 734  QNTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTV 913
            + T    L F R +   +G++GY DSDYA DLD+RRS TGY+FT     VSW++TLQS V
Sbjct: 1165 RGTTYSCLKFGRTD---KGLIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVV 1221

Query: 914  ALSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            ALSTTEAEYMA+ EA KE IWL+GL  +L   +  I + CDSQSA
Sbjct: 1222 ALSTTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSQSA 1266


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  205 bits (522), Expect = 2e-50
 Identities = 100/164 (60%), Positives = 126/164 (76%)
 Frame = +2

Query: 557  DEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYIQ 736
            D E EYM++VPY++AVGSLMYAMVC+RPD+S A+S+VSRYM +PGK HW+AV+WI RY++
Sbjct: 1106 DAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLR 1165

Query: 737  NTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTVA 916
             T    L F R +   +G++GY DSDYA DLD+RRS TGY+FT     VSW++TLQS VA
Sbjct: 1166 GTTYSCLKFGRTD---KGLIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVA 1222

Query: 917  LSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            LSTTEAEYMA+ EA KE IWL+GL  +L   +  I + CDSQSA
Sbjct: 1223 LSTTEAEYMAICEACKELIWLKGLYAELSGVESCISLHCDSQSA 1266


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  205 bits (522), Expect = 2e-50
 Identities = 104/164 (63%), Positives = 126/164 (76%)
 Frame = +2

Query: 557  DEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYIQ 736
            + ER  M++VPYA+AVGSLMYAM+CTRPDI+QAV +VSR+M DPGK HW AVK I+RYI+
Sbjct: 1077 EAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIK 1136

Query: 737  NTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTVA 916
             T  V + F   E   RG   Y DSD+AGD DKR+STTGY+FT A   VSW S LQ+ VA
Sbjct: 1137 GTSGVAVCFGGSELTVRG---YVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVA 1193

Query: 917  LSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            LSTTEAEYMA T+A KEAIW+Q L+++LG  Q+ I V+CDSQSA
Sbjct: 1194 LSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSA 1237


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  205 bits (522), Expect = 2e-50
 Identities = 104/164 (63%), Positives = 126/164 (76%)
 Frame = +2

Query: 557  DEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYIQ 736
            + ER  M++VPYA+AVGSLMYAM+CTRPDI+QAV +VSR+M DPGK HW AVK I+RYI+
Sbjct: 1077 EAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIK 1136

Query: 737  NTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTVA 916
             T  V + F   E   RG   Y DSD+AGD DKR+STTGY+FT A   VSW S LQ+ VA
Sbjct: 1137 GTSGVAVCFGGSELTVRG---YVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVA 1193

Query: 917  LSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            LSTTEAEYMA T+A KEAIW+Q L+++LG  Q+ I V+CDSQSA
Sbjct: 1194 LSTTEAEYMAATQACKEAIWMQRLMEELGHKQEQITVYCDSQSA 1237


>emb|CAD40782.2| OSJNBb0012E08.6 [Oryza sativa Japonica Group]
          Length = 375

 Score =  205 bits (522), Expect = 2e-50
 Identities = 99/165 (60%), Positives = 126/165 (76%)
 Frame = +2

Query: 554  TDEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVSIVSRYMHDPGKGHWQAVKWILRYI 733
            TDE+ EYM++VPY++ VGSLMYAMVC+RPD+S A+S+VSRYM +PGK HW+AV+WI RY+
Sbjct: 161  TDEDVEYMSRVPYSSDVGSLMYAMVCSRPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYL 220

Query: 734  QNTVDVGLVFERDEAFGRGVVGYCDSDYAGDLDKRRSTTGYLFTFAKAPVSWKSTLQSTV 913
            + T D  L F R +   +G+VGY DSD+A DLDKRRS T Y+FT     +SWK+TLQ  V
Sbjct: 221  RGTADACLKFGRTD---KGLVGYVDSDFAADLDKRRSLTDYVFTIGSCAMSWKATLQPVV 277

Query: 914  ALSTTEAEYMAVTEAVKEAIWLQGLLKDLGVGQKHIEVFCDSQSA 1048
            A STTEAEYMA+ EA KE++WL+GL  +L      I +FCDSQSA
Sbjct: 278  AQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSA 322