BLASTX nr result
ID: Rauwolfia21_contig00014861
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00014861
(3449 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] 462 e-142
emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera] 427 e-133
gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobrom... 414 e-123
gb|EMJ22494.1| hypothetical protein PRUPE_ppa024499mg, partial [... 390 e-119
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera] 398 e-116
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia] 399 e-115
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] 391 e-115
gb|EMJ00160.1| hypothetical protein PRUPE_ppa020671mg, partial [... 402 e-114
gb|EOY16836.1| Uncharacterized protein TCM_035724 [Theobroma cacao] 413 e-112
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 391 e-111
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 366 e-108
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 368 e-108
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 384 e-108
gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus pe... 385 e-108
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 380 e-107
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 367 e-107
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 366 e-107
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum] 372 e-107
gb|EMJ21939.1| hypothetical protein PRUPE_ppa023598mg [Prunus pe... 383 e-107
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 363 e-107
>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
Length = 1521
Score = 462 bits (1190), Expect(3) = e-142
Identities = 238/471 (50%), Positives = 315/471 (66%), Gaps = 13/471 (2%)
Frame = -1
Query: 1376 YTDSIWCDVIPMTITHILLGRQWLYDREVKHNR-KNTHSFKFNKKKIVLRPLTAEEMNEY 1200
+ +S+WC+V+P+ ++HILLGR WL+DR+V+H+ +NT++ N +K +LRP+
Sbjct: 479 FEESVWCEVLPIKVSHILLGRPWLFDRKVQHDGYENTYALIHNGRKKILRPM-------- 530
Query: 1199 RGKRPSKHEETQSKAKMLSKKKPLQVFNKKTLEKEARETGTIFMVVVKDVSPTQANLEDF 1020
+E K +P +V E E++ET IF ++ + V + +++
Sbjct: 531 --------KEVPPIKKSNENAQPKKVLTMCQFENESKETXVIFALMARKVEEFKEQDKEY 582
Query: 1019 SPELKQLLADFSDVAPEDLPKGLPPMRNIQHATDFVPGSQLPNLPPYHMSPAAHAELKRQ 840
+++L DFSD+ P +LP LPPMR+IQHA D +PG+ LPNLP Y M+P HAELKRQ
Sbjct: 583 PANARKILDDFSDLWPVELPNELPPMRDIQHAIDLIPGASLPNLPAYRMNPTEHAELKRQ 642
Query: 839 VEELLDKGLIQECLTPCAVPALLTPKKDGTWRMCCDCRAINKITVKYRLPIPRLDDMLGM 660
V+ELL KG I+E L+PC VPALLTPKKDG+WRMC D RAINKIT+KYR PIPRLDDML M
Sbjct: 643 VDELLTKGFIRESLSPCGVPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDM 702
Query: 659 MADSTIYSKIDLTKGCYPLRIRPGDE*KTTFETKDGLYEWLVMPFGLANAASTFVRFMTQ 480
M S I+SKIDL G + +RIRPGDE KT+F+TKDGLYEWLVMPFGL NA STF+R MTQ
Sbjct: 703 MVGSVIFSKIDLRSGYHQIRIRPGDEWKTSFKTKDGLYEWLVMPFGLTNAPSTFMRIMTQ 762
Query: 479 VLQHLLG---ISLWYILMIYS-----FIVRLKMSI-*ITFKKF*SIASRKTIHQPEEVLF 327
VL+ +G + + ++IYS LK + + +KF + T P V
Sbjct: 763 VLKPFIGRFVVVYFDDILIYSRSCEDHEEHLKQVMRTLRAEKFYINLKKCTFMSPSVVFL 822
Query: 326 ---VSAKGIEVDPNNFMAILDWPLLTTSREFLSFHGLATFYRRFIRNFSTLVAPITDCLK 156
VS+KG+E DP AI+DWP+ T E SFHG+ATFYRRFIRNFS+++APIT+C+K
Sbjct: 823 GFVVSSKGVETDPEKIKAIVDWPVPTNIHEVRSFHGMATFYRRFIRNFSSIMAPITECMK 882
Query: 155 KGQFSWTSAATKEFKEVKKRMTKALV*HLPDFSKIFEVACDASNIGIGGVL 3
G F WT AA K F+E+K +M + LPDF K+FEVACDAS++GIG VL
Sbjct: 883 PGLFIWTKAANKAFEEIKSKMVNPPILRLPDFEKVFEVACDASHVGIGAVL 933
Score = 50.1 bits (118), Expect(3) = e-142
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = -3
Query: 1629 LVVWRILSAPKQQ-KEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNLN 1462
LVV +L+ PK + +EDWRR SIFQ + C +IIDGGS +N+ S+ ++ LN
Sbjct: 387 LVVRPLLTIPKVKGEEDWRRISIFQTRISCHGRLCTMIIDGGSSLNIASQELVEKLN 443
Score = 45.1 bits (105), Expect(3) = e-142
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = -2
Query: 1477 VEKLKLPTEPHPEPYRVAWIDSSSIPVNTFTMLHTLILFG 1358
VEKL L TE HP P+RVAW++ +SIPV +F L T LFG
Sbjct: 439 VEKLNLKTERHPNPFRVAWVNDTSIPV-SFRCLVT-FLFG 476
Score = 86.7 bits (213), Expect(2) = 2e-27
Identities = 43/106 (40%), Positives = 67/106 (63%)
Frame = -1
Query: 2288 TWEEMKLELKRKYLPRYYQQDLFDELTTLRQGSLTVIEYMNKFEELKIRCRGTEDSRQTL 2109
TW+EMKL++K +LP Y+Q ++ +L +L+QG+ +V EY +F EL IR + E Q
Sbjct: 158 TWDEMKLKMKEHFLPTDYEQLMYTKLFSLKQGTKSVEEYTEEFHELSIRNQVXESDAQLA 217
Query: 2108 SRFKQGLRPEIRNQMLTYQVNSIEDAFQLAHMIERNLKQPARRFPT 1971
+R+K GLR EI+ +M+ +++D +QLA IE LK R P+
Sbjct: 218 ARYKAGLRMEIQLEMIAAHTYTVDDVYQLALKIEEGLKFRVSRHPS 263
Score = 66.2 bits (160), Expect(2) = 2e-27
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Frame = -2
Query: 2653 EGSQNSGPLQAETTENNPAQIMVRPQNTLLGMANNILEGGRHENL-EIQDTTGDITKKVS 2477
E SQ P++ E + Q P + N ++ R L E+ D D+TKKV
Sbjct: 36 EKSQEKRPIEEEIASH---QFRQSPNRSREEQDNFMMGNQRRAKLFELDD---DVTKKVR 89
Query: 2476 IDVPDFDGKIDS*VFIDWLASLERFFDWYNMSDESKVRYIVMKLIGQAQ 2330
++V +F GK++ F+DW+ S+E +FDWY M + KVR++ KL G A+
Sbjct: 90 LEVAEFYGKLNPTAFLDWIMSMEDYFDWYAMPENRKVRFVKAKLKGAAR 138
>emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera]
Length = 1292
Score = 427 bits (1098), Expect(3) = e-133
Identities = 220/463 (47%), Positives = 301/463 (65%), Gaps = 5/463 (1%)
Frame = -1
Query: 1376 YTDSIWCDVIPMTITHILLGRQWLYDREVKHNR-KNTHSFKFNKKKIVLRPLTAEEMNEY 1200
+ +S+WC+V+P+ ++HILLGR WL+DR V+H+ +NT++ N K +LRP+
Sbjct: 397 FEESVWCEVLPIKVSHILLGRPWLFDRXVQHDGYENTYALIHNGCKTILRPM-------- 448
Query: 1199 RGKRPSKHEETQSKAKMLSKKKPLQVFNKKTLEKEARETGTIFMVVVKDVSPTQANLEDF 1020
+E K +P +V + E E++ET IF ++ + V ++ +++
Sbjct: 449 --------KEVSPIKKSDENAQPKKVLSMCQFENESKETKVIFALMARKVEESKEQDKEY 500
Query: 1019 SPELKQLLADFSDVAPEDLPKGLPPMRNIQHATDFVPGSQLPNLPPYHMSPAAHAELKRQ 840
++++L DFSD P +LP LPPMR++QHA D +PG+ LPNLP Y M+P HAELKRQ
Sbjct: 501 PANVRKILDDFSDFWPTELPNQLPPMRDVQHAIDLIPGASLPNLPAYRMNPTEHAELKRQ 560
Query: 839 VEELLDKGLIQECLTPCAVPALLTPKKDGTWRMCCDCRAINKITVKYRLPIPRLDDMLGM 660
V+ELL KG I+E L+P VPALLTPKKDG+WRMC D RA+NKIT+KYR PIPRLDDML M
Sbjct: 561 VDELLTKGFIRESLSPYGVPALLTPKKDGSWRMCVDSRAMNKITIKYRFPIPRLDDMLDM 620
Query: 659 MADSTIYSKIDLTKGCYPLRIRPGDE*KTTFETKDGLYEWLVMPFGLANAASTFVRFMTQ 480
M S I+SKIDL G + +RIRPGDE KT+F+TKDGLYEWLVM FGL NA STF+R MTQ
Sbjct: 621 MVRSVIFSKIDLRSGYHQIRIRPGDEWKTSFKTKDGLYEWLVMLFGLTNAPSTFMRIMTQ 680
Query: 479 VLQHLLGISLWYILMIYSFIVRLKMSI*ITFKKF*SIASRKTIHQPEEVLFVSAKGIEVD 300
VL+ +G ++++ + I+ S H + + + A+ ++
Sbjct: 681 VLKPFIGR---FVVVYFDDILIYSRS-----------CEDHEEHLKQVMCTLKAEKFYIN 726
Query: 299 ----PNNFMAILDWPLLTTSREFLSFHGLATFYRRFIRNFSTLVAPITDCLKKGQFSWTS 132
P AI+DWP+ T E SFHG+ATFYRRFIRNFS+++A IT+C+K G F WT
Sbjct: 727 LKKYPEKIKAIVDWPVPTNIHEVRSFHGMATFYRRFIRNFSSIMALITECMKLGLFIWTK 786
Query: 131 AATKEFKEVKKRMTKALV*HLPDFSKIFEVACDASNIGIGGVL 3
AA K F+E+K +M + LPDF K+ EVACDAS++GIG VL
Sbjct: 787 AANKAFEEIKSKMVNPPILRLPDFEKVCEVACDASHVGIGVVL 829
Score = 53.9 bits (128), Expect(3) = e-133
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = -3
Query: 1629 LVVWRILSAPK-QQKEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNLN 1462
LVV +L+ PK +++EDWRRTSIFQ + C +IIDGGS +N+ S+ ++ LN
Sbjct: 305 LVVRPLLTVPKVKREEDWRRTSIFQTRISCQGRLCTMIIDGGSSLNIASQELVEKLN 361
Score = 45.1 bits (105), Expect(3) = e-133
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = -2
Query: 1477 VEKLKLPTEPHPEPYRVAWIDSSSIPVNTFTMLHTLILFG 1358
VEKL L TE HP P+RVAW++ +SIPV +F L T LFG
Sbjct: 357 VEKLNLKTERHPNPFRVAWVNDTSIPV-SFRCLVT-FLFG 394
Score = 69.3 bits (168), Expect = 1e-08
Identities = 35/113 (30%), Positives = 63/113 (55%)
Frame = -2
Query: 2653 EGSQNSGPLQAETTENNPAQIMVRPQNTLLGMANNILEGGRHENLEIQDTTGDITKKVSI 2474
E SQ P++ E + Q+ R + +N + G + ++ + D+TKKV +
Sbjct: 46 EKSQEKXPIEEEIASHQFRQLPSRSRKE----QDNFMMGNQRR-AKLFELDDDVTKKVRL 100
Query: 2473 DVPDFDGKIDS*VFIDWLASLERFFDWYNMSDESKVRYIVMKLIGQAQSREYD 2315
+V +F GK++ F+DW+ S+E +FDWY M + KVR++ KL G A+++ +
Sbjct: 101 EVAEFYGKLNPTTFLDWIMSMEDYFDWYAMPENRKVRFVKAKLKGAARTKSVE 153
>gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1452
Score = 414 bits (1063), Expect(3) = e-123
Identities = 224/470 (47%), Positives = 301/470 (64%), Gaps = 14/470 (2%)
Frame = -1
Query: 1370 DSIWCDVIPMTITHILLGRQWLYDREVKHNRK-NTHSFKFNKKKIVLRPLTAEEMNEYRG 1194
D CDV+PM + HIL+GR WLYD ++ H K NT+SF N K+ L PL E
Sbjct: 398 DEALCDVVPMDVGHILVGRPWLYDHDMVHKTKPNTYSFYKNNKRYTLYPLREET------ 451
Query: 1193 KRPSKHEETQSKAKMLSKKKPLQVFNKKTLEKEARETGTIFMVVVKDVSPTQANLEDFSP 1014
K+ + H+ + K + + + E E E G ++ +V K + Q + P
Sbjct: 452 KKSANHKIS----------KITRYLSAENFEAEGSEMGIMYALVTKHLKSDQMSKSPQYP 501
Query: 1013 -ELKQLLADFSDVAPEDLPKGLPPMRNIQHATDFVPGSQLPNLPPYHMSPAAHAELKRQV 837
E++QLL +F ++ EDLPK LPP+R+IQHA D VPG+ LPNLP Y M P AE++RQV
Sbjct: 502 TEIQQLLKEFGELFNEDLPKSLPPLRSIQHAIDLVPGAALPNLPAYRMPPMQRAEVQRQV 561
Query: 836 EELLDKGLIQECLTPCAVPALLTPKKDGTWRMCCDCRAINKITVKYRLPIPRLDDMLGMM 657
EEL +KGL++E +PCA PALL PKKDG+WRMC D RAINKIT+KYR PIPRLD+ML +
Sbjct: 562 EELFEKGLVRESKSPCACPALLAPKKDGSWRMCVDSRAINKITIKYRFPIPRLDEMLDQL 621
Query: 656 ADSTIYSKIDLTKGCYPLRIRPGDE*KTTFETKDGLYEWLVMPFGLANAASTFVRFMTQV 477
S ++SKIDL G + +R+R GDE KT F+T DGL+EWLVMPFGL+NA STF+R M +V
Sbjct: 622 VGSRVFSKIDLKSGYHQIRMRDGDEWKTAFKTPDGLFEWLVMPFGLSNAPSTFMRVMAEV 681
Query: 476 LQHLLG---ISLWYILMIYS-----FIVRLKMSI*ITFKKF*SIASRKTIHQPEEVLF-- 327
L+ L + + ++IYS + L+ + + K+ I +K EV+F
Sbjct: 682 LKPFLNSFVVVYFDDILIYSHTKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLG 741
Query: 326 --VSAKGIEVDPNNFMAILDWPLLTTSREFLSFHGLATFYRRFIRNFSTLVAPITDCLKK 153
VSA+G++ DP AI +WP T+ +E SFHGLA+FYRRFIRNFS++++PIT+ LKK
Sbjct: 742 FIVSAEGLKPDPEKIRAISEWPAPTSIKEVRSFHGLASFYRRFIRNFSSIMSPITESLKK 801
Query: 152 GQFSWTSAATKEFKEVKKRMTKALV*HLPDFSKIFEVACDASNIGIGGVL 3
F W+ +A K F+ VK MT+A V LPDF K+F V CDAS +GIG VL
Sbjct: 802 DGFEWSHSAQKAFERVKALMTEAPVLALPDFEKLFVVECDASYVGIGAVL 851
Score = 45.1 bits (105), Expect(3) = e-123
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = -3
Query: 1629 LVVWRILSAP-KQQKEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNLNYLQ 1453
LVV RI++ ++ EDW+R SIF+ V C L+IDGGS N++S+ + L
Sbjct: 303 LVVRRIMTTTVNEEAEDWKRRSIFRTRVVCEGKVCDLVIDGGSMENIISKEAVNKLKLPT 362
Query: 1452 N 1450
N
Sbjct: 363 N 363
Score = 37.0 bits (84), Expect(3) = e-123
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 1477 VEKLKLPTEPHPEPYRVAWIDSS-SIPVNT 1391
V KLKLPT HP PY++ W+ +PV T
Sbjct: 355 VNKLKLPTNKHPYPYKIGWLKKGHEVPVTT 384
>gb|EMJ22494.1| hypothetical protein PRUPE_ppa024499mg, partial [Prunus persica]
Length = 1364
Score = 390 bits (1003), Expect(3) = e-119
Identities = 222/462 (48%), Positives = 290/462 (62%), Gaps = 6/462 (1%)
Frame = -1
Query: 1370 DSIWCDVIPMTITHILLGRQWLYDREVKH-NRKNTHSFKFNKKKIVLRPLTAEEMNEYRG 1194
+ I+ D++PM + H+LLGR WLYD V++ R+NT++F+ K I LRP
Sbjct: 437 EDIYLDLLPMNVAHVLLGRPWLYDHCVQNCGRENTYTFQHEGKSITLRPANP-------A 489
Query: 1193 KRPSKHEETQSKAKMLSKKK--PLQVFNKKTLEKEARETGTIFMVVVKDVSPTQANLEDF 1020
+P+K T S L + + EKE +
Sbjct: 490 IKPTKTNITTSSPSQTGNVSGHQLALLSYGEFEKEKISAAPSYQ---------------- 533
Query: 1019 SPE-LKQLLADFSDVAPEDLPKGLPPMRNIQHATDFVPGSQLPNLPPYHMSPAAHAELKR 843
PE L QLL +FSDV +DLP LPPMR+IQHA D VPGSQL NLP Y M+ + AEL
Sbjct: 534 QPEPLHQLLNEFSDVMLDDLPNELPPMRDIQHAIDLVPGSQLLNLPHYRMNSSERAELNT 593
Query: 842 QVEELLDKGLIQECLTPCAVPALLTPKKDGTWRMCCDCRAINKITVKYRLPIPRLDDMLG 663
Q++ LLDKG I+ L+ CAVP LLTPKKDG+WRMC D RAINKITVKYR PIPRL+ ML
Sbjct: 594 QIQGLLDKGFIRHSLSSCAVPVLLTPKKDGSWRMCVDSRAINKITVKYRFPIPRLEAMLE 653
Query: 662 MMADSTIYSKIDLTKGCYPLRIRPGDE*KTTFETKDGLYEWLVMPFGLANAASTFVRFMT 483
+A S +SKIDL G + +RIR GDE KT F+T DGLYEWLVMPFG++NA STF+R MT
Sbjct: 654 ELAGSKWFSKIDLRSGYHQIRIREGDEWKTAFKTPDGLYEWLVMPFGMSNAPSTFMRVMT 713
Query: 482 QVLQHLLGISLWYILMIYSFIVRLKMSI*ITFKKF*SIASRKTIHQ--PEEVLFVSAKGI 309
VL+ +G L++Y + + + K + +TI +E LFV+ K
Sbjct: 714 HVLRPYIG----KFLVVYFDDILI-----YSHSKEDHLQHLRTIFHMLRQEKLFVNLK-- 762
Query: 308 EVDPNNFMAILDWPLLTTSREFLSFHGLATFYRRFIRNFSTLVAPITDCLKKGQFSWTSA 129
DP+ AI++WPL +T E SFHGLA+FYRRFI +FST++APITDC+K+G+F WT A
Sbjct: 763 NADPDKVHAIVNWPLPSTLTETRSFHGLASFYRRFIPSFSTIMAPITDCMKQGEFRWTHA 822
Query: 128 ATKEFKEVKKRMTKALV*HLPDFSKIFEVACDASNIGIGGVL 3
AT+ F+ +K++MT+A V P+ +K+FEVACDAS +GIGGVL
Sbjct: 823 ATRAFEALKQKMTEAPVLRHPELTKVFEVACDASGVGIGGVL 864
Score = 48.1 bits (113), Expect(3) = e-119
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = -3
Query: 1587 EDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNLN 1462
+ W+RTSIF V C + T KL+ID GS MNV+S++ + LN
Sbjct: 359 DSWKRTSIFHTYVPCNNQTCKLVIDSGSTMNVISKSAVTRLN 400
Score = 40.8 bits (94), Expect(3) = e-119
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -2
Query: 1486 RSYVEKLKLPTEPHPEPYRVAWIDSSSIPV 1397
+S V +L L EPHP P+ VAW+D + +PV
Sbjct: 393 KSAVTRLNLKPEPHPHPFHVAWVDKTKLPV 422
>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
Length = 1392
Score = 398 bits (1022), Expect(2) = e-116
Identities = 216/458 (47%), Positives = 278/458 (60%)
Frame = -1
Query: 1376 YTDSIWCDVIPMTITHILLGRQWLYDREVKHNRKNTHSFKFNKKKIVLRPLTAEEMNEYR 1197
+ +S+WC+V+P+ ++HILLGR WL+D RK H N ++ +
Sbjct: 490 FEESVWCEVLPIKVSHILLGRPWLFD------RKVQHDGYENTYALI-----------HN 532
Query: 1196 GKRPSKHEETQSKAKMLSKKKPLQVFNKKTLEKEARETGTIFMVVVKDVSPTQANLEDFS 1017
G+ KK L +K+V P + + E+
Sbjct: 533 GR-------------------------KKILRP------------MKEVPPIKKSDENAQ 555
Query: 1016 PELKQLLADFSDVAPEDLPKGLPPMRNIQHATDFVPGSQLPNLPPYHMSPAAHAELKRQV 837
P+ ++LP LPPMR+IQHA D +PG+ LPNLP Y M+P HAELKRQV
Sbjct: 556 PK-------------KELPNELPPMRDIQHAIDLIPGASLPNLPAYRMNPTEHAELKRQV 602
Query: 836 EELLDKGLIQECLTPCAVPALLTPKKDGTWRMCCDCRAINKITVKYRLPIPRLDDMLGMM 657
+ELL KG I+E L+PC VPALLTPKKDG+WRMC D RAINKIT+KYR PIPRLDDML MM
Sbjct: 603 DELLTKGFIRESLSPCGVPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMM 662
Query: 656 ADSTIYSKIDLTKGCYPLRIRPGDE*KTTFETKDGLYEWLVMPFGLANAASTFVRFMTQV 477
S I+SKIDL G + +RIRPGDE KT+F+TKDGLYEWLVMPFGL NA STF+R MTQV
Sbjct: 663 VGSVIFSKIDLRSGYHQIRIRPGDEWKTSFKTKDGLYEWLVMPFGLTNAPSTFMRIMTQV 722
Query: 476 LQHLLGISLWYILMIYSFIVRLKMSI*ITFKKF*SIASRKTIHQPEEVLFVSAKGIEVDP 297
L+ +G ++++ + I+ I SR E + +G+E DP
Sbjct: 723 LKPFIG---RFVVVYFDDIL---------------IYSRSCEDHEEHL----KQGVETDP 760
Query: 296 NNFMAILDWPLLTTSREFLSFHGLATFYRRFIRNFSTLVAPITDCLKKGQFSWTSAATKE 117
AI+DWP+ T E SFHG+ATFYRRFIRNFS+++APIT+C+K G F WT AA K
Sbjct: 761 EKIKAIVDWPVPTNIHEVRSFHGMATFYRRFIRNFSSIMAPITECMKPGLFIWTKAANKA 820
Query: 116 FKEVKKRMTKALV*HLPDFSKIFEVACDASNIGIGGVL 3
F+E+K +M + LPDF K+FEVACDAS++GIG VL
Sbjct: 821 FEEIKSKMVNPPILRLPDFEKVFEVACDASHVGIGAVL 858
Score = 52.8 bits (125), Expect(2) = e-116
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = -3
Query: 1629 LVVWRILSAPKQQ-KEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNLN 1462
LVV +L+ PK + +EDWRRTSIFQ + C +IIDGGS +N+ S+ ++ LN
Sbjct: 398 LVVRPLLTVPKVKGEEDWRRTSIFQTRISCQGRLCTMIIDGGSSLNIASQELVEKLN 454
Score = 81.3 bits (199), Expect(3) = 2e-33
Identities = 43/107 (40%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Frame = -1
Query: 2288 TWEEMKLELKRKYLPRYYQQDLFDELTTLRQGSLTVIEYMNKFEE-LKIRCRGTEDSRQT 2112
TW+EMKL++K +LP Y+Q ++ +L +L+QG+ +V EY +F E L IR + E Q
Sbjct: 168 TWDEMKLKMKEHFLPTDYEQLMYTKLFSLKQGTKSVEEYTEEFHELLSIRNQVRESDAQL 227
Query: 2111 LSRFKQGLRPEIRNQMLTYQVNSIEDAFQLAHMIERNLKQPARRFPT 1971
+R+K GLR EI+ +M+ +++D +QLA IE LK R P+
Sbjct: 228 AARYKAGLRMEIQLEMIAAHTYTVDDVYQLALKIEEGLKFRVSRRPS 274
Score = 66.2 bits (160), Expect(3) = 2e-33
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Frame = -2
Query: 2653 EGSQNSGPLQAETTENNPAQIMVRPQNTLLGMANNILEGGRHENL-EIQDTTGDITKKVS 2477
E SQ P++ E + Q P + N ++ R L E+ D D+TKKV
Sbjct: 46 EKSQEKRPIEEEIASH---QFRQSPNRSREEQDNFMMGNQRRAKLFELDD---DVTKKVR 99
Query: 2476 IDVPDFDGKIDS*VFIDWLASLERFFDWYNMSDESKVRYIVMKLIGQAQ 2330
++V +F GK++ F+DW+ S+E +FDWY M + KVR++ KL G A+
Sbjct: 100 LEVAEFYGKLNPTAFLDWIMSMEDYFDWYAMPENRKVRFVKAKLKGAAR 148
Score = 45.4 bits (106), Expect(3) = 2e-33
Identities = 63/226 (27%), Positives = 84/226 (37%), Gaps = 29/226 (12%)
Frame = -2
Query: 1948 PESTSN-------TGGTKAQQ*HPPTICQDNIKNKAQVVETRRQDANRECFNCRIRGHYA 1790
P STSN GG QQ N + R+ D CF C GHYA
Sbjct: 289 PLSTSNFRTPNHVNGGGNTQQTSNVAYKNGNKGKNSMSNGDRKVDVTPLCFKCGGHGHYA 348
Query: 1789 W*RPKRKNLHVGVDLNVEEQEAGDGEEK---------KADF*D-------------IRLP 1676
P K+LH V+ E E+ EE+ + D+ D + +P
Sbjct: 349 VVCPT-KSLHFCVEEPESELESYPKEEETYNEDEVSEECDYYDGMTEGXSLVVRPLLTVP 407
Query: 1675 RR**S*RWGRRLVVPSCCLAYT*CS*AAKGGLEKNIYFPGHSLLWRHNPKTYY*WG*LYE 1496
+ W R + + + +G L I G SL
Sbjct: 408 KVKGEEDWRRTSIFQTRI--------SCQGRLCTMIIDGGSSL----------------N 443
Query: 1495 CGVRSYVEKLKLPTEPHPEPYRVAWIDSSSIPVNTFTMLHTLILFG 1358
+ VEKL L TE HP P+RVAW++ +SIPV +F L T LFG
Sbjct: 444 IASQELVEKLNLKTERHPNPFRVAWVNDTSIPV-SFRCLVT-FLFG 487
>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
Length = 1518
Score = 399 bits (1026), Expect(3) = e-115
Identities = 219/472 (46%), Positives = 293/472 (62%), Gaps = 14/472 (2%)
Frame = -1
Query: 1376 YTDSIWCDVI-PMTITHILLGRQWLYDREVKHNRK-NTHSFKFNKKKIVLRPLTAEEMNE 1203
Y D + CDV+ PM H+LLGR W YDR H K N + FK KK+ L PL + +
Sbjct: 470 YKDEVLCDVVVPMDACHLLLGRPWEYDRNTTHQGKDNVYIFKHQGKKVTLTPLPPNQRDY 529
Query: 1202 YRGKRPSKHEETQSKAKMLSKKKPLQVFNKKTLEKEARETGTIFMVVVKDVSPTQANLED 1023
P E S LS+ + KE R+ + M++ ++V+ + +
Sbjct: 530 GSPNVP----EEMSGVLFLSEAAMI---------KEIRQAQPVLMLLSREVNQEENTVVP 576
Query: 1022 FSPELKQLLADFSDVAPEDLPKGLPPMRNIQHATDFVPGSQLPNLPPYHMSPAAHAELKR 843
+ + L+ F +V P++LP GLPP+R I+H D VPGS LPN P Y P A EL+
Sbjct: 577 TA--VAPLIQRFQEVFPDELPSGLPPLRGIEHHIDLVPGSVLPNKPAYRCDPNATKELQH 634
Query: 842 QVEELLDKGLIQECLTPCAVPALLTPKKDGTWRMCCDCRAINKITVKYRLPIPRLDDMLG 663
Q+EEL+ KG ++E L+PCAVPALL PKKDGTWRMC D RAIN ITVKYR PIPRLDDML
Sbjct: 635 QIEELMAKGFVRESLSPCAVPALLVPKKDGTWRMCTDSRAINNITVKYRFPIPRLDDMLD 694
Query: 662 MMADSTIYSKIDLTKGCYPLRIRPGDE*KTTFETKDGLYEWLVMPFGLANAASTFVRFMT 483
++ ++I+SKIDL +G + +RIR GDE KT F+TK GLYEWLVMPFGL+NA STF+R MT
Sbjct: 695 ELSGASIFSKIDLRQGYHQVRIREGDEWKTAFKTKHGLYEWLVMPFGLSNAPSTFMRLMT 754
Query: 482 QVLQHLLG---ISLWYILMIYS-----FIVRLKMSI*ITFKKF*SIASRKTIHQPEEVLF 327
+VL+ LG + + +++YS + L++ I ++ K EEV F
Sbjct: 755 EVLRPCLGKFAVVYFDDILVYSKTKGEHLKHLEVVFKILREQKLYGKLEKCTFMVEEVAF 814
Query: 326 ----VSAKGIEVDPNNFMAILDWPLLTTSREFLSFHGLATFYRRFIRNFSTLVAPITDCL 159
+S +GI VD N A+ WP TT E SFHGLA+FYRRFI+NFST+VAPIT+C+
Sbjct: 815 LGYLISGRGISVDQENIAAMQSWPTPTTVTEVRSFHGLASFYRRFIKNFSTVVAPITECM 874
Query: 158 KKGQFSWTSAATKEFKEVKKRMTKALV*HLPDFSKIFEVACDASNIGIGGVL 3
+KG+F WT A + F+++K+ M + LPDF ++FEV CDAS +GIG VL
Sbjct: 875 RKGEFQWTEQAQQSFEKIKQLMCNTPILKLPDFDQLFEVECDASGVGIGAVL 926
Score = 34.3 bits (77), Expect(3) = e-115
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = -3
Query: 1629 LVVWRILSAPKQQKEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNL 1465
L +WR++ + + E +R+ IF++ LII+GGSC NV S + L
Sbjct: 378 LFLWRVMHSQQAPLEADQRSMIFRSRCTVQGRVCNLIINGGSCTNVASTTMVSKL 432
Score = 33.9 bits (76), Expect(3) = e-115
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 1477 VEKLKLPTEPHPEPYRVAWIDSSS 1406
V KL LPT+ HP PY++ W+ S
Sbjct: 429 VSKLGLPTQEHPNPYKLRWLSKDS 452
Score = 62.8 bits (151), Expect(2) = 2e-12
Identities = 30/95 (31%), Positives = 56/95 (58%)
Frame = -1
Query: 2288 TWEEMKLELKRKYLPRYYQQDLFDELTTLRQGSLTVIEYMNKFEELKIRCRGTEDSRQTL 2109
+W ++K ++ K++ + Y QDLF +L+ L+Q TV Y+ +FE+L ++C E S Q +
Sbjct: 160 SWSKLKKKMLAKFVTKDYTQDLFIKLSNLKQKEKTVEAYLREFEQLTLQCEINEKSEQRI 219
Query: 2108 SRFKQGLRPEIRNQMLTYQVNSIEDAFQLAHMIER 2004
+RF +GL I ++ + S +D L+ +E+
Sbjct: 220 ARFLEGLDKNIAAEVRMQPLWSYDDVVNLSLRVEK 254
Score = 39.3 bits (90), Expect(2) = 2e-12
Identities = 17/67 (25%), Positives = 37/67 (55%)
Frame = -2
Query: 2533 RHENLEIQDTTGDITKKVSIDVPDFDGKIDS*VFIDWLASLERFFDWYNMSDESKVRYIV 2354
+ E+LE D + + +++P+F G ++ ++W+ +E+ F++ N +D + V
Sbjct: 79 QEEHLEQTD------RHIKVEIPEFSGSLNPDDLLEWIRDVEKIFEYKNYNDVKACKVAV 132
Query: 2353 MKLIGQA 2333
+KL G A
Sbjct: 133 LKLKGYA 139
>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
Length = 1475
Score = 391 bits (1005), Expect(3) = e-115
Identities = 209/475 (44%), Positives = 295/475 (62%), Gaps = 16/475 (3%)
Frame = -1
Query: 1379 SYTDSIWCDVIPMTITHILLGRQWLYDRE-VKHNRKNTHSFKFNKKKIVLRPLTAEEMNE 1203
+Y+D CDV+PM H+LLGR W +DR+ V H R NT++FKF +K++L PL
Sbjct: 458 NYSDEALCDVLPMDACHLLLGRPWEFDRDSVHHGRDNTYTFKFRSRKVILTPLPPV---- 513
Query: 1202 YRGKRPSKHEETQSKAKMLSKKKPLQVFNKKTLEKEARETGTIFMVVVKDVSPTQANLED 1023
KH S ML K + + N+ + +E + ++ ++ KDV Q
Sbjct: 514 ------LKHTTPPS---MLEPSKEVLLINEAEMLQELKGDEDVYALIAKDVVFGQN--VS 562
Query: 1022 FSPELKQLLADFSDVAPEDLPKGLPPMRNIQHATDFVPGSQLPNLPPYHMSPAAHAELKR 843
E+++LL + DV P +LP GLPP+R I+H DF+PG+ LPN Y P A EL++
Sbjct: 563 LPKEVQELLQSYEDVFPNELPSGLPPLRGIEHQIDFIPGATLPNKAAYRSDPKATQELQQ 622
Query: 842 QVEELLDKGLIQECLTPCAVPALLTPKKDGTWRMCCDCRAINKITVKYRLPIPRLDDMLG 663
Q+ EL+ KG ++E L+PC+VPALL PKKDG+WRMC D RAIN IT+KYR PIPRLDD+L
Sbjct: 623 QIGELVSKGFVRESLSPCSVPALLVPKKDGSWRMCTDSRAINNITIKYRFPIPRLDDILD 682
Query: 662 MMADSTIYSKIDLTKGCYPLRIRPGDE*KTTFETKDGLYEWLVMPFGLANAASTFVRFMT 483
++ + ++SKIDL +G + +RI+ GDE KT F+TK GLYEWLVMPFGL+NA STF+R MT
Sbjct: 683 ELSGAQLFSKIDLRQGYHQVRIKEGDEWKTAFKTKHGLYEWLVMPFGLSNAPSTFMRLMT 742
Query: 482 QVLQHLLGISLWYILMIYSFIVRLKMSI*ITFKK----F*SIASRKTIHQPEEVLF---- 327
+VL+ LG ++++ + I+ S K F ++ K + E+ F
Sbjct: 743 EVLRPYLG---RFVVVYFDDILVYSPSKEEHLKHLQVLFETLREHKLYGKLEKCSFMQNE 799
Query: 326 -------VSAKGIEVDPNNFMAILDWPLLTTSREFLSFHGLATFYRRFIRNFSTLVAPIT 168
+S +GI VD AI WP+ + SFHGLA+FYRRFI++FSTL+APIT
Sbjct: 800 VQFLGFIISDRGILVDQEKVKAIKSWPIPKNITDVRSFHGLASFYRRFIKDFSTLMAPIT 859
Query: 167 DCLKKGQFSWTSAATKEFKEVKKRMTKALV*HLPDFSKIFEVACDASNIGIGGVL 3
+C+KKG+F W A F +K+++ ++ + LP+F+K+FEV CDAS IGIG VL
Sbjct: 860 ECMKKGEFKWGDKAESSFNIIKEKLCESPILTLPNFNKLFEVECDASGIGIGAVL 914
Score = 39.7 bits (91), Expect(3) = e-115
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = -3
Query: 1629 LVVWRILSAPKQQKEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNLN 1462
LV WR++ Q E +R IF++ LIIDGGSC NV S ++ L+
Sbjct: 367 LVTWRVMHTQPQPLEMDQRQQIFRSRCTIKGRVCNLIIDGGSCTNVASSTLIEKLS 422
Score = 35.4 bits (80), Expect(3) = e-115
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 1477 VEKLKLPTEPHPEPYRVAWIDSSS 1406
+EKL LPT+ HP PY++ W++ +
Sbjct: 418 IEKLSLPTQDHPSPYKLRWLNKGA 441
Score = 68.6 bits (166), Expect(2) = 4e-16
Identities = 32/95 (33%), Positives = 58/95 (61%)
Frame = -1
Query: 2288 TWEEMKLELKRKYLPRYYQQDLFDELTTLRQGSLTVIEYMNKFEELKIRCRGTEDSRQTL 2109
+W ++K +L K++P+ Y QD+F +LT L+Q + Y+ FE+L ++C E Q +
Sbjct: 158 SWLKLKKKLNEKFIPKEYTQDIFIKLTQLKQDQQPLESYLRDFEQLTLQCELNEKPEQKI 217
Query: 2108 SRFKQGLRPEIRNQMLTYQVNSIEDAFQLAHMIER 2004
+RF +GL +I +++ QV S ++A LA +E+
Sbjct: 218 ARFVEGLDTKIAHRVRMQQVWSFDEAVNLALRVEK 252
Score = 45.8 bits (107), Expect(2) = 4e-16
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Frame = -2
Query: 2536 GRHENLEIQDTT--------GDITKKVSIDVPDFDGKIDS*VFIDWLASLERFFDWYNMS 2381
G HE E+ D+ G+ K + +++PDF G ++ +DW ++ER F++ S
Sbjct: 62 GGHEEEELSDSEESMAEAFHGEPNKDLKVEIPDFHGSLNPEDLLDWFRTIERVFEFKGYS 121
Query: 2380 DESKVRYIVMKLIGQA 2333
D + ++KL G A
Sbjct: 122 DGKAFKVAILKLKGYA 137
>gb|EMJ00160.1| hypothetical protein PRUPE_ppa020671mg, partial [Prunus persica]
Length = 1460
Score = 402 bits (1032), Expect(2) = e-114
Identities = 224/472 (47%), Positives = 301/472 (63%), Gaps = 16/472 (3%)
Frame = -1
Query: 1370 DSIWCDVIPMTITHILLGRQWLYDREVKH-NRKNTHSFKFNKKKIVLRPLTAEEMNEYRG 1194
+ I+ D +PM + H+LLGR WLYD V++ R+NT++F+ K I+LRP
Sbjct: 488 EDIYLDQLPMNVAHVLLGRPWLYDHRVQNCGRENTYTFQHEGKSIMLRPANP-------A 540
Query: 1193 KRPSKHEETQSKAKMLSKKKP--LQVFNKKTLEKEARETGTIFMVVVKDVSPTQANLEDF 1020
+P+K T S L + + EKE+ ETG +F +V+K++S + +
Sbjct: 541 IKPTKTNITTSSPSQTGNMSGHRLALLSYGEFEKESLETGVVFALVIKEISAAPSYQQ-- 598
Query: 1019 SPE-LKQLLADFSDVAPEDLPKGLPPMRNIQHATDFVPGSQLPNLPPYHMSPAAHAELKR 843
PE L Q L +FSDV P+DLP LPPMR+IQHA D VPGSQLPNLP Y M+ + HAEL
Sbjct: 599 -PEPLHQFLNEFSDVMPDDLPNELPPMRDIQHAIDLVPGSQLPNLPHYRMNSSEHAELNT 657
Query: 842 QVEELLDKGLIQECLTPCAVPALLTPKKDGTWRMCCDCRAINKITVKYRLPIPRLDDMLG 663
Q++ LLDKG I+ L+PCAVP L TPKKDG+WRMC D RAINKIT DML
Sbjct: 658 QIQGLLDKGFIRHSLSPCAVPVLFTPKKDGSWRMCVDSRAINKIT-----------DMLD 706
Query: 662 MMADSTIYSKIDLTKGCYPLRIRPGDE*KTTFETKDGLYEWLVMPFGLANAASTFVRFMT 483
+A S +SKIDL G + +RIR GDE KT F+T DGLYEWLVMPFG++NA STF+R MT
Sbjct: 707 ELAGSKWFSKIDLHSGYHQIRIREGDEWKTAFKTPDGLYEWLVMPFGMSNAPSTFMRVMT 766
Query: 482 QVLQHLLG---ISLWYILMIYS-----FIVRLKMSI*ITFKKF*SIASRKTIHQPEEVLF 327
V + +G + + ++IYS + L+ + ++ + +K E+VLF
Sbjct: 767 HVFRPYIGKFLVVYFDDILIYSHSKEDHLQHLRTIFHMLRQEKLFVNLKKCSFLQEQVLF 826
Query: 326 ----VSAKGIEVDPNNFMAILDWPLLTTSREFLSFHGLATFYRRFIRNFSTLVAPITDCL 159
VSA I DP+ AI++WPL +T E SFHGLA+FYRRFI +FST++APITDC+
Sbjct: 827 LGFIVSAASISADPDKVHAIVNWPLPSTLTETRSFHGLASFYRRFIPSFSTIMAPITDCM 886
Query: 158 KKGQFSWTSAATKEFKEVKKRMTKALV*HLPDFSKIFEVACDASNIGIGGVL 3
K+G+F WT A T+ F+ +K++MT+A V P+ +K+FEVACDAS +GIGGVL
Sbjct: 887 KQGEFRWTHATTRAFEALKQKMTEAPVLCHPELTKVFEVACDASGVGIGGVL 938
Score = 41.6 bits (96), Expect(2) = e-114
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -2
Query: 1486 RSYVEKLKLPTEPHPEPYRVAWIDSSSIPVNTFTML 1379
+S V +L L EPHP P+ VAW+D + +PV + ++
Sbjct: 444 KSAVTRLNLKPEPHPHPFHVAWVDKTKLPVTEWCLV 479
Score = 60.1 bits (144), Expect(2) = 1e-16
Identities = 38/117 (32%), Positives = 60/117 (51%)
Frame = -1
Query: 2291 VTWEEMKLELKRKYLPRYYQQDLFDELTTLRQGSLTVIEYMNKFEELKIRCRGTEDSRQT 2112
+ W+EMKL+L+ +YLP +Y QD Y +F E K+ E+ T
Sbjct: 262 ILWDEMKLKLREQYLPSFYLQD-----------------YYCRFVEHKLHSALQEELAVT 304
Query: 2111 LSRFKQGLRPEIRNQMLTYQVNSIEDAFQLAHMIERNLKQPARRFPTKAGEVTNTRK 1941
+SRF GLR +I+ ++ + + +EDA+ A E L+ P RR+P G+ T T +
Sbjct: 305 VSRFIHGLRIDIKREVSRSRPDVLEDAYCQALEAETYLR-PQRRYPGYPGQPTTTNQ 360
Score = 56.2 bits (134), Expect(2) = 1e-16
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = -2
Query: 2530 HENLEIQDTTGDITKKVSIDVPDFDGKIDS*VFIDWLASLERFFDWYNMSDESKVRYIVM 2351
H NL+ + I PDFDG+ D +F+DW++++E +F+W +MSD ++R+ +
Sbjct: 182 HRNLDFE-----IAHHAKPTAPDFDGRGDPTLFVDWISAMEDYFEWDDMSDAQRIRFAKL 236
Query: 2350 KLIG 2339
KL+G
Sbjct: 237 KLVG 240
>gb|EOY16836.1| Uncharacterized protein TCM_035724 [Theobroma cacao]
Length = 475
Score = 413 bits (1061), Expect = e-112
Identities = 226/470 (48%), Positives = 299/470 (63%), Gaps = 14/470 (2%)
Frame = -1
Query: 1370 DSIWCDVIPMTITHILLGRQWLYDREVKHNRK-NTHSFKFNKKKIVLRPLTAEEMNEYRG 1194
D CDV+PM + HIL+GR WLYD ++ H K NT+SF N K+ L PL
Sbjct: 7 DEALCDVVPMDVGHILVGRPWLYDHDMVHKTKPNTYSFYKNNKRYTLYPL---------- 56
Query: 1193 KRPSKHEETQSKAKMLSKKKPLQVFNKKTLEKEARETGTIFMVVVKDVSPTQANLEDFSP 1014
EET+ A K + + E E E G ++ +V K + Q + P
Sbjct: 57 -----REETKKSANN-KISKITGYLSAENFEAEGSEMGIMYALVTKHLKSDQMSKSPQYP 110
Query: 1013 -ELKQLLADFSDVAPEDLPKGLPPMRNIQHATDFVPGSQLPNLPPYHMSPAAHAELKRQV 837
E++QLL +F ++ EDLPK LPP+R+IQHA D VPG+ LPNLP Y M P AE++RQV
Sbjct: 111 TEIQQLLKEFGELFNEDLPKSLPPLRSIQHAIDLVPGAALPNLPAYRMPPMQRAEVQRQV 170
Query: 836 EELLDKGLIQECLTPCAVPALLTPKKDGTWRMCCDCRAINKITVKYRLPIPRLDDMLGMM 657
EELL+KGL++E +PCA PALL PKKDG+WRMC D RAINKIT+KYR PIPRLD+ML +
Sbjct: 171 EELLEKGLVRESKSPCACPALLAPKKDGSWRMCVDSRAINKITIKYRFPIPRLDEMLDQL 230
Query: 656 ADSTIYSKIDLTKGCYPLRIRPGDE*KTTFETKDGLYEWLVMPFGLANAASTFVRFMTQV 477
S ++SKIDL G + +R+R GDE KT F+T DGL+EWLVMPFGL+NA STF+R M +V
Sbjct: 231 VGSRVFSKIDLKSGYHQIRMRDGDEWKTAFKTPDGLFEWLVMPFGLSNAPSTFMRVMAEV 290
Query: 476 LQHLLG---ISLWYILMIYS-----FIVRLKMSI*ITFKKF*SIASRKTIHQPEEVLF-- 327
L+ L + + ++IYS + L+ + + K+ I +K EV+F
Sbjct: 291 LKPFLNSFVVVYFDDILIYSHTKEKHLKYLRQVLEVLQKEQLYINLKKCSFMQPEVVFLG 350
Query: 326 --VSAKGIEVDPNNFMAILDWPLLTTSREFLSFHGLATFYRRFIRNFSTLVAPITDCLKK 153
VSA+G++ DP AI +WP T+ +E SFHGLA+FYRRFIRNFS++++PIT+ LKK
Sbjct: 351 FIVSAEGLKPDPEKIRAISEWPAPTSIKEVRSFHGLASFYRRFIRNFSSIMSPITESLKK 410
Query: 152 GQFSWTSAATKEFKEVKKRMTKALV*HLPDFSKIFEVACDASNIGIGGVL 3
F W+ +A K F+ VK MT+A V LPDF K+F V CDAS +GIG VL
Sbjct: 411 DGFEWSHSAQKAFERVKALMTEAPVLALPDFEKLFVVECDASYVGIGAVL 460
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 391 bits (1004), Expect(3) = e-111
Identities = 219/499 (43%), Positives = 292/499 (58%), Gaps = 41/499 (8%)
Frame = -1
Query: 1376 YTDSIWCDVIPMTITHILLGRQWLYDREVKHNRK-NTHSFKFNKKKIVLRPLTAEEMNEY 1200
Y D + CDVIPM HILLGR W YDR+ H+ K N ++ KK L PL +E+
Sbjct: 474 YQDDVLCDVIPMHACHILLGRPWQYDRDTLHHGKTNKYTIHKGGKKYTLTPLAPKEVYNL 533
Query: 1199 RGKRPSKHEETQSKAKMLSKKKPLQVFNKKTLEKEARETGT------------------- 1077
+ + EE KAK K+ N EK+ R+ G
Sbjct: 534 QVQSKKLREELAQKAKEAMKETTSGKQNTIAHEKKQRKEGMKKDTTQSSHNLLMTKREVE 593
Query: 1076 --------IFMVVVKDVSPTQANLEDFSPELKQLLADFSDVAPEDLPKGLPPMRNIQHAT 921
+F++ D E ++ LL++F+DV PE+LPKGLPP+R I+H
Sbjct: 594 QALRRGEGVFLLYPIDFCLNVIKSEIIPSDVSALLSEFADVFPEELPKGLPPIRGIEHQI 653
Query: 920 DFVPGSQLPNLPPYHMSPAAHAELKRQVEELLDKGLIQECLTPCAVPALLTPKKDGTWRM 741
D +PG+ LPN P Y +P E++RQV+ELL G IQE L+PCAVP LL PKKDGTWRM
Sbjct: 654 DLIPGASLPNRPAYRTNPDEAKEIQRQVDELLQAGFIQESLSPCAVPVLLVPKKDGTWRM 713
Query: 740 CCDCRAINKITVKYRLPIPRLDDMLGMMADSTIYSKIDLTKGCYPLRIRPGDE*KTTFET 561
C DCRAIN ITVKYR PIPRLDDML + + I+SKIDL +G + +R++ GDE KT F+T
Sbjct: 714 CVDCRAINNITVKYRYPIPRLDDMLDELHGAKIFSKIDLRRGYHQIRMQKGDEWKTAFKT 773
Query: 560 KDGLYEWLVMPFGLANAASTFVRFMTQVLQHLLG---ISLWYILMIYS-----FIVRLKM 405
K+GLYEWLVMPFGL NA STF+R M VL++ +G + + ++IYS I+ LK
Sbjct: 774 KNGLYEWLVMPFGLTNAPSTFMRLMNHVLRNFIGKFVVVYFDDILIYSKDPQKHIIHLKE 833
Query: 404 SI*ITFKKF*SIASRKTIHQPEEVLF----VSAKGIEVDPNNFMAILDWPLLTTSREFLS 237
+ ++ K E V+F VS+KGIEVD AI DWP T+ + S
Sbjct: 834 VFLVLRREQLYANLEKCYFGVESVVFLGFIVSSKGIEVDETKIQAIRDWPTPKTATKVRS 893
Query: 236 FHGLATFYRRFIRNFSTLVAPITDCLKKG-QFSWTSAATKEFKEVKKRMTKALV*HLPDF 60
FHGLA+FYRRF+++FST+ AP+ + +KK +F W + F+ +K+++ A V LP+F
Sbjct: 894 FHGLASFYRRFVKDFSTIAAPLNELVKKDVKFEWGPKQEQAFQTLKEKLCSAQVLSLPNF 953
Query: 59 SKIFEVACDASNIGIGGVL 3
K FE+ CDAS IGIG VL
Sbjct: 954 DKTFEIECDASGIGIGAVL 972
Score = 32.7 bits (73), Expect(3) = e-111
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = -3
Query: 1635 FLLVVWRILSAPKQQKEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSE 1483
F VV + LS ++ +R +IF T IIDGGSC NV+SE
Sbjct: 381 FNCVVHKALSTLVVLDQEEQRENIFYGKCKIPGATCSFIIDGGSCTNVISE 431
Score = 30.4 bits (67), Expect(3) = e-111
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -2
Query: 1477 VEKLKLPTEPHPEPYRVAWID 1415
V +K+PT HP+PY++ W++
Sbjct: 434 VNAMKIPTIQHPQPYKLQWLN 454
Score = 67.8 bits (164), Expect(3) = 3e-14
Identities = 32/116 (27%), Positives = 63/116 (54%)
Frame = -1
Query: 2288 TWEEMKLELKRKYLPRYYQQDLFDELTTLRQGSLTVIEYMNKFEELKIRCRGTEDSRQTL 2109
TW E+K E++RK++P + +D+ +L L+QGS +V E+ + E LK R ED T+
Sbjct: 155 TWGELKREMRRKFVPSNFYRDMRRKLQELKQGSKSVREFYKEMERLKARANIQEDDETTI 214
Query: 2108 SRFKQGLRPEIRNQMLTYQVNSIEDAFQLAHMIERNLKQPARRFPTKAGEVTNTRK 1941
+R +G +IR ++ + + ++ ++A +E L+ P+ + + R+
Sbjct: 215 ARILEGFNRDIRRELRNQEFDDVDKLVRVASKVEDELRSERGSKPSLSSQWDQPRR 270
Score = 32.3 bits (72), Expect(3) = 3e-14
Identities = 12/57 (21%), Positives = 30/57 (52%)
Frame = -2
Query: 2515 IQDTTGDITKKVSIDVPDFDGKIDS*VFIDWLASLERFFDWYNMSDESKVRYIVMKL 2345
+++ + + +++P F+G + VF++W+ +E F +N +E K + + L
Sbjct: 74 VEERVDNNLSSLRMEMPTFNGDDEPEVFLNWVDEVEDIFGLHNFGEEKKFKTAIASL 130
Score = 27.3 bits (59), Expect(3) = 3e-14
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = -2
Query: 1942 STSNTGGTKAQQ*HP-PTICQDNIKNKAQVVETRRQDANRE-----CFNCRIRGHYAW*R 1781
+T+N+ ++ Q+ + P+ Q+ KN + E ++ + ++ C+ C+ RGHYA
Sbjct: 271 ATNNSYQSRTQKEYSRPSHTQEEKKNNQREKEKFQEGSKQKVSTVTCYRCQGRGHYAREC 330
Query: 1780 PKRKNL 1763
P K +
Sbjct: 331 PNTKKI 336
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 366 bits (940), Expect(3) = e-108
Identities = 208/507 (41%), Positives = 300/507 (59%), Gaps = 43/507 (8%)
Frame = -1
Query: 1394 YFHHASYTDSIWCDVIPMTITHILLGRQWLYDREVKH-NRKNTHSFKFNKKKIVLRPLTA 1218
+F SY DSI CDV+PM +LLGR W +D++ H + N +SF N KK+VL P++
Sbjct: 554 HFAIGSYHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHPMSP 613
Query: 1217 EEMNEYRGKRPSKH---EETQSKAKMLS------KKKPLQ----------------VFNK 1113
E + + R SK E T+S+ + + KKKP + K
Sbjct: 614 EVILKDELARASKQKNQEHTRSEHLIAANELEKHKKKPTNSVQNNKNEIKLKGSCFIATK 673
Query: 1112 KTLEKEARETGTIFMVVVKD-VSPTQANLEDFSPELKQLLADFSDVAPEDLPKGLPPMRN 936
L++ +T + +V K+ + P + P + LL +++D+ P+++P GLPP+R
Sbjct: 674 SDLDEVDTDTVVCYALVCKETLFPIEDTPISLPPPVTNLLQEYADIFPKEVPPGLPPIRG 733
Query: 935 IQHATDFVPGSQLPNLPPYHMSPAAHAELKRQVEELLDKGLIQECLTPCAVPALLTPKKD 756
I+H D +PG+ LPN PY +P E++RQV+ELLDKG ++E L+PC+VP LL PKKD
Sbjct: 734 IEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKD 793
Query: 755 GTWRMCCDCRAINKITVKYRLPIPRLDDMLGMMADSTIYSKIDLTKGCYPLRIRPGDE*K 576
G+WRMC DCRAIN IT++YR PIPRLDDML ++ S ++SKIDL G + +R++ GDE K
Sbjct: 794 GSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWK 853
Query: 575 TTFETKDGLYEWLVMPFGLANAASTFVRFMTQVLQHLLGISLWYILMIYSFIVRLKMSI* 396
T F+TK GLYEWLVMPFGL NA STF+R M +VL+ +G ++++ + I+ SI
Sbjct: 854 TAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIG---RFVVVYFDDILIYSRSIE 910
Query: 395 ITF----KKF*SIASRKTIHQPEEVLF-----------VSAKGIEVDPNNFMAILDWPLL 261
F ++ + E+ F V+ +GIEVD AI +WP+
Sbjct: 911 DHHGHLRAVFDALRDARLFGNLEKCTFCTDRVSFLSYVVTPQGIEVDQAKVEAIHNWPVP 970
Query: 260 TTSREFLSFHGLATFYRRFIRNFSTLVAPITDCLKKG-QFSWTSAATKEFKEVKKRMTKA 84
TT + SF GLA FYRRF+++FST+ AP+ + K+ F+W +A F +K ++T A
Sbjct: 971 TTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAAAQRNAFDTLKDKLTHA 1030
Query: 83 LV*HLPDFSKIFEVACDASNIGIGGVL 3
+ LPDF+K FE CDAS IG+GGVL
Sbjct: 1031 PLLQLPDFNKTFEHECDASGIGLGGVL 1057
Score = 40.0 bits (92), Expect(3) = e-108
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -3
Query: 1629 LVVWRILSAPKQQKEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNL 1465
LVV R+LSA ++ E +R ++FQ + + ++IIDGGSC N+ S ++ L
Sbjct: 469 LVVQRVLSAQMERAEQNQRHTLFQTKCVIKERSCRVIIDGGSCNNLASAEMVEKL 523
Score = 38.9 bits (89), Expect(3) = e-108
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -2
Query: 1477 VEKLKLPTEPHPEPYRVAWIDSS-SIPVNTFTMLHTLI 1367
VEKL L T+PHP+PY + W++SS + V +H I
Sbjct: 520 VEKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAI 557
Score = 65.9 bits (159), Expect(2) = 3e-11
Identities = 36/111 (32%), Positives = 59/111 (53%)
Frame = -1
Query: 2303 SNYSVTWEEMKLELKRKYLPRYYQQDLFDELTTLRQGSLTVIEYMNKFEELKIRCRGTED 2124
+N TW+ MK ++ +++P Y+ +DL +L LRQG+ +V EY + +RC E+
Sbjct: 217 NNTPQTWDAMKRVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQTGMLRCGLVEN 276
Query: 2123 SRQTLSRFKQGLRPEIRNQMLTYQVNSIEDAFQLAHMIERNLKQPARRFPT 1971
++RF GL EI++ + + NSI F LA ER ++ F T
Sbjct: 277 DDAGMARFMGGLNREIQDILTYKEYNSINHLFHLACKAEREVQGRRASFRT 327
Score = 32.0 bits (71), Expect(2) = 3e-11
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = -2
Query: 2596 QIMVRPQNTLLGMANNILEGGRHENLEIQDTTGDITKKVSIDVPDFDGKIDS*VFIDWLA 2417
+++ RPQ + + R E + D+ G K+ +P FDGK D ++ W
Sbjct: 121 EVLGRPQRQQRRQRHGLGAPPRREVRDNDDSLG----KIKFTIPCFDGKYDPDAYLTWEL 176
Query: 2416 SLERFFDWYNMSDESKVR 2363
++++ F ++ + VR
Sbjct: 177 AIDQKFACHDFPENKCVR 194
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 368 bits (944), Expect(3) = e-108
Identities = 207/507 (40%), Positives = 299/507 (58%), Gaps = 43/507 (8%)
Frame = -1
Query: 1394 YFHHASYTDSIWCDVIPMTITHILLGRQWLYDREVKH-NRKNTHSFKFNKKKIVLRPLTA 1218
+F SY DSI CDV+PM I LGR W +D++ H + N +SF N KK+VL P++
Sbjct: 554 HFAIGSYHDSINCDVVPMQACSIFLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHPMSP 613
Query: 1217 EEMNEYRGKRPSKH---EETQSKAKMLS------KKKPLQ----------------VFNK 1113
E + + R SK E T+S+ + + KKKP + K
Sbjct: 614 EVILKDELARASKQKNQEHTRSEHLIAANELEKHKKKPTNSVQNNKNEIKLKGSCFIATK 673
Query: 1112 KTLEKEARETGTIFMVVVKD-VSPTQANLEDFSPELKQLLADFSDVAPEDLPKGLPPMRN 936
L++ +T + +V K+ + P + P + LL +++D+ P+++P GLPP+R
Sbjct: 674 SDLDEVDTDTVVCYALVCKETLFPIEDTPISLPPPVTNLLQEYADIFPKEVPPGLPPIRG 733
Query: 935 IQHATDFVPGSQLPNLPPYHMSPAAHAELKRQVEELLDKGLIQECLTPCAVPALLTPKKD 756
I+H D +PG+ LPN PY +P E++RQV+ELLDKG ++E L+PC++P LL PKKD
Sbjct: 734 IEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSIPVLLVPKKD 793
Query: 755 GTWRMCCDCRAINKITVKYRLPIPRLDDMLGMMADSTIYSKIDLTKGCYPLRIRPGDE*K 576
G+WRMC DCRAIN IT++YR PIPRLDDML ++ S ++SKIDL G + +R++ GDE K
Sbjct: 794 GSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWK 853
Query: 575 TTFETKDGLYEWLVMPFGLANAASTFVRFMTQVLQHLLGISLWYILMIYSFIVRLKMSI* 396
T F+TK GLYEWLVMPFGL NA STF+R M +VL+ +G ++++ + I+ SI
Sbjct: 854 TAFKTKFGLYEWLVMPFGLTNAPSTFIRLMNEVLRAFIG---RFVVVYFDDILIYSRSIE 910
Query: 395 ITF----KKF*SIASRKTIHQPEEVLF-----------VSAKGIEVDPNNFMAILDWPLL 261
F ++ + E+ F V+ +GIEVD AI WP+
Sbjct: 911 DHHGHLRAVFDALRDERLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHSWPVP 970
Query: 260 TTSREFLSFHGLATFYRRFIRNFSTLVAPITDCLKKG-QFSWTSAATKEFKEVKKRMTKA 84
TT + SF GLA FYRRF+++FST+ AP+ + K+ F+W +A F +K ++T A
Sbjct: 971 TTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAAAQRNAFDTLKDKLTHA 1030
Query: 83 LV*HLPDFSKIFEVACDASNIGIGGVL 3
+ LPDF+K FE+ CDAS IG+GGVL
Sbjct: 1031 PLLQLPDFNKTFELECDASGIGLGGVL 1057
Score = 38.9 bits (89), Expect(3) = e-108
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -2
Query: 1477 VEKLKLPTEPHPEPYRVAWIDSS-SIPVNTFTMLHTLI 1367
VEKL L T+PHP+PY + W++SS + V +H I
Sbjct: 520 VEKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAI 557
Score = 37.0 bits (84), Expect(3) = e-108
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = -3
Query: 1629 LVVWRILSAPKQQKEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNL 1465
LVV R+LSA ++ E +R ++FQ + + ++IID GSC N+ S ++ L
Sbjct: 469 LVVQRVLSAQMERAEQNQRHTLFQTKCVIKERSCRVIIDRGSCNNLASAEMVEKL 523
Score = 65.9 bits (159), Expect = 1e-07
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Frame = -1
Query: 2303 SNYSVTWEEMKLELKRKYLPRYYQQDLFDELTTLRQGSLTVIEYMNKFEELKIRCRGTED 2124
+N TW+ MK ++ +++P Y+ +DL +L LRQG+ +V EY + +RC E+
Sbjct: 217 NNTPQTWDAMKRVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQTGMLRCGLVEN 276
Query: 2123 SRQTLSRFKQGLRPEIRNQMLTYQVNSIEDAFQLAHMIERNLKQPARRFPT--KAGEVTN 1950
++RF GL EI++ + + NSI F LA ER ++ F T AG ++
Sbjct: 277 DDAGMARFMGGLNREIQDILAYKEYNSINRLFHLACKAEREVQGRRASFRTNISAGRASS 336
Query: 1949 -TRKYLQHWRHKSSTMTSANNMPR 1881
T + +++ +S+NN R
Sbjct: 337 WTSSNVAAPSTRAAAPSSSNNKLR 360
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 384 bits (986), Expect(4) = e-108
Identities = 229/529 (43%), Positives = 296/529 (55%), Gaps = 66/529 (12%)
Frame = -1
Query: 1391 FHHASYTDSIWCDVIPMTITHILLGRQWLYDREVKHN-RKNTHSFKFNKKKIVLRPLTA- 1218
F+ Y D I CDV+PM H+LLGR W YDR+ H+ RKN +S N KK L PL+
Sbjct: 487 FNVGRYEDEILCDVVPMQACHVLLGRPWQYDRDTTHHGRKNRYSLLHNGKKYTLAPLSPS 546
Query: 1217 ----------EEMNEYRGKRPSKHE---------------ETQSKAKMLSKK------KP 1131
E M + +G+ S+ E E + + LSK+ K
Sbjct: 547 QVFEDQKRLRETMGKQKGEVKSELEGKEKGQEIEKKKDGREKEREGSDLSKEVKEGVSKK 606
Query: 1130 LQVFNKKTLEKEA----------------RETGTIFMVVVKDVSPTQANLEDFSPEL--- 1008
++ F ++ KE RE I ++ K++ N E +P L
Sbjct: 607 IKCFGERKEAKEKKNESLYIKAKECLNARREGLPIILLTYKEIL---INFEQLTPSLPNS 663
Query: 1007 -KQLLADFSDVAPEDLPKGLPPMRNIQHATDFVPGSQLPNLPPYHMSPAAHAELKRQVEE 831
LL +F DV P+D PKGLPP+R I+H DFVPGSQLPN P Y +P EL+RQVEE
Sbjct: 664 VSSLLQNFEDVFPDDTPKGLPPLRGIEHQIDFVPGSQLPNRPAYRSNPEETKELQRQVEE 723
Query: 830 LLDKGLIQECLTPCAVPALLTPKKDGTWRMCCDCRAINKITVKYRLPIPRLDDMLGMMAD 651
LL KG ++E ++PC+VP LL PKKDGTWRMC DCRAINKITVKYR PIPRLDDML +
Sbjct: 724 LLVKGFVRESMSPCSVPVLLVPKKDGTWRMCVDCRAINKITVKYRHPIPRLDDMLDQLCG 783
Query: 650 STIYSKIDLTKGCYPLRIRPGDE*KTTFETKDGLYEWLVMPFGLANAASTFVRFMTQVLQ 471
S I+SKIDL G + +R+ PGDE KT F+TK GLYEWLVMPFGL NA STF+R M V +
Sbjct: 784 SKIFSKIDLKSGYHQIRLNPGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVFK 843
Query: 470 HLLG-ISLWYILMIYSFIVRLKMSI*ITFKKF*SIASRKTIHQPEEVLF----------- 327
G + Y I F L + K F + +++ ++ F
Sbjct: 844 DFHGKFIVVYFDDILIFSQNLDEHLEHLKKVFEVLRNQRLFANLKKCTFCVDRVVFLGFV 903
Query: 326 VSAKGIEVDPNNFMAILDWPLLTTSREFLSFHGLATFYRRFIRNFSTLVAPITDCLKKGQ 147
VS+ G+EVD AI +WP + E SFHGLA+FYRRF+R+FST+ AP+T+ +KK +
Sbjct: 904 VSSMGVEVDDEKIKAIKEWPKPNSVTEVRSFHGLASFYRRFVRDFSTIAAPLTEVIKKDK 963
Query: 146 -FSWTSAATKEFKEVKKRMTKALV*HLPDFSKIFEVACDASNIGIGGVL 3
F+W F +K ++ A + LPDFSK FEV CDAS GIG VL
Sbjct: 964 VFTWGKEQDDAFNLLKDKLCSAPLLQLPDFSKSFEVECDASGKGIGAVL 1012
Score = 32.3 bits (72), Expect(4) = e-108
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -3
Query: 1626 VVWRILSAPKQQKEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNL 1465
VV RI++ ++ +R ++F T +IIDGGSC NVVS + L
Sbjct: 402 VVRRIMTINLGSVDEGQRENLFHTRCGIKGKTYSMIIDGGSCANVVSSYLVDKL 455
Score = 25.0 bits (53), Expect(4) = e-108
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = -2
Query: 1852 ETRRQDANRECFNCRIRGHYAW*RPKRKNLHVGVDLNVE------EQEAGDGEEKKAD 1697
++ + ++ +C C RGH P R+N+ + + E E+E G+G ++ D
Sbjct: 334 KSSKPSSSIQCHKCHGRGHMMHECPSRRNILLRENGEYESEKSEREEEEGEGVSEEDD 391
Score = 23.5 bits (49), Expect(4) = e-108
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -2
Query: 1489 VRSY-VEKLKLPTEPHPEPYRVAWI-DSSSIPVNTFTML 1379
V SY V+KL + PYR+ W+ D + VN M+
Sbjct: 447 VSSYLVDKLGIACMKRSTPYRLQWLNDCGEVQVNKQCMI 485
Score = 68.9 bits (167), Expect(2) = 4e-13
Identities = 31/99 (31%), Positives = 58/99 (58%)
Frame = -1
Query: 2288 TWEEMKLELKRKYLPRYYQQDLFDELTTLRQGSLTVIEYMNKFEELKIRCRGTEDSRQTL 2109
TW EMK ++++++P Y+Q+DL L L+QGS++V EY + I+ E+ T+
Sbjct: 187 TWAEMKRVMRKRFIPSYFQRDLQSRLQRLKQGSMSVDEYFKSMDMAMIQANCMEEEEATI 246
Query: 2108 SRFKQGLRPEIRNQMLTYQVNSIEDAFQLAHMIERNLKQ 1992
+RF GL EI N + Q ++++ L+ +E+ +++
Sbjct: 247 ARFLNGLNTEIANVVEIQQYVTLDELVDLSVKVEKQIEK 285
Score = 35.4 bits (80), Expect(2) = 4e-13
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = -2
Query: 2524 NLEIQDTTG-------DITKKVSIDVPDFDGKIDS*VFIDWLASLERFFDWYNMSDESKV 2366
NLE +D G D + + + F G D +++DW +E FD +N S+ KV
Sbjct: 96 NLERRDRRGQRGRVEDDNINSIKMKMSSFKGTRDPDLYLDWERRVEAIFDCHNYSEGKKV 155
Query: 2365 RYIVMKLIGQAQS 2327
+ V++ A S
Sbjct: 156 KLAVVEFSDYAAS 168
>gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
Length = 1485
Score = 385 bits (988), Expect(2) = e-108
Identities = 215/471 (45%), Positives = 287/471 (60%), Gaps = 13/471 (2%)
Frame = -1
Query: 1376 YTDSIWCDVIPMTITHILLGRQWLYDREVKHN-RKNTHSFKFNKKKIVLRPLTAEEMNEY 1200
Y D + CDVI M HILLGR W +D + R N F +N +KI M
Sbjct: 495 YRDEVLCDVIDMDACHILLGRPWQFDVDATFKGRDNVILFSWNNRKIA--------MTTT 546
Query: 1199 RGKRPSKHEETQSKAKMLSKKKPLQVFNKKTLEKEARETGTIFMVVVKDVSPTQANLEDF 1020
+ +PS +T+S + L+ Q N+ KEA G D
Sbjct: 547 QPSKPSVEVKTRSSS-FLTLISNEQELNEAV--KEAEGEG------------------DI 585
Query: 1019 SPELKQLLADFSDVAPEDLPKGLPPMRNIQHATDFVPGSQLPNLPPYHMSPAAHAELKRQ 840
+++Q+L+ F ++ E+LP LPPMR+IQH D VPG+ L NLP Y MSP + L+ Q
Sbjct: 586 PQDVQQILSQFQELFSENLPNELPPMRDIQHRIDLVPGASLQNLPHYRMSPKENDILREQ 645
Query: 839 VEELLDKGLIQECLTPCAVPALLTPKKDGTWRMCCDCRAINKITVKYRLPIPRLDDMLGM 660
+EELL KG I+E L+PCAVP LL PKKD TWRMC D RAINKITVKYR PIPRL+DML +
Sbjct: 646 IEELLRKGFIRESLSPCAVPVLLVPKKDKTWRMCVDSRAINKITVKYRFPIPRLEDMLDV 705
Query: 659 MADSTIYSKIDLTKGCYPLRIRPGDE*KTTFETKDGLYEWLVMPFGLANAASTFVRFMTQ 480
++ S ++SKIDL G + +RIRPGDE KT F++KDGL+EWLVMPFGL+N STF+R M Q
Sbjct: 706 LSGSKVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGLFEWLVMPFGLSNTPSTFMRLMNQ 765
Query: 479 VLQHLLG---ISLWYILMIYS-----FIVRLKMSI*ITFKKF*SIASRKTIHQPEEVLF- 327
VL+ +G + + ++IYS +V L+ + + + + +K ++LF
Sbjct: 766 VLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLDVLRENKLFVNLKKCTFCTNKLLFL 825
Query: 326 ---VSAKGIEVDPNNFMAILDWPLLTTSREFLSFHGLATFYRRFIRNFSTLVAPITDCLK 156
V GI+VD AILDWP T E SFHGLATFYRRF+R+FS++VAPIT+CLK
Sbjct: 826 GFVVGEHGIQVDDEKIKAILDWPAPKTVSEVRSFHGLATFYRRFVRHFSSIVAPITECLK 885
Query: 155 KGQFSWTSAATKEFKEVKKRMTKALV*HLPDFSKIFEVACDASNIGIGGVL 3
KG+FSW + F ++K+++ A V LP+F K+FEV CDAS +G+G VL
Sbjct: 886 KGRFSWGEEQERSFADIKEKLCTAPVLALPNFEKVFEVECDASGVGVGAVL 936
Score = 36.2 bits (82), Expect(2) = e-108
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = -3
Query: 1629 LVVWRILSAPKQQKEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNLNYLQ 1453
LV+ R+L AP+ E+ +R SIF+++ + +I+D GSC N VS+ K + YLQ
Sbjct: 406 LVLQRVLLAPR---EEGQRHSIFRSLCSIKNKVCDVIVDNGSCENFVSK---KLVEYLQ 458
Score = 56.2 bits (134), Expect(2) = 3e-12
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Frame = -1
Query: 2288 TWEEMKLELKRKYLPRYYQQDLFDELTTLRQGSLTVIEYMNKFEELKIRCRGTEDSRQTL 2109
TW +MK + ++LP Y+Q L+ QG+ +V EY +F L R TE Q +
Sbjct: 174 TWRKMKSLMMEQFLPTDYEQILYRMYLGCAQGTHSVSEYTEEFMRLAERNHLTETDNQKV 233
Query: 2108 SRFKQGLRPEIRNQMLTYQVNSIEDAFQL---AHMIERNLKQP-ARRFPTKAGEVT 1953
+R+ GL+ I+ ++ + ++++A + A ++E+ +QP RR T+A + T
Sbjct: 234 ARYNNGLKISIQEKIGMQNIWTLQEAINMALKAELLEKEKRQPNFRRNTTEASDYT 289
Score = 45.1 bits (105), Expect(2) = 3e-12
Identities = 34/142 (23%), Positives = 64/142 (45%)
Frame = -2
Query: 2770 KRVDALEAKFNELMTMKTGAKSEATSSGAKDNKKQVEEEEGSQNSGPLQAETTENNPAQI 2591
+R+D L +F E+ + A +DN+++ + E N L ++ + ++
Sbjct: 22 RRIDNLTNQFGEMRELLLQALGGNNRREGRDNERR--DGERRDNMRQLNPDSESESEEEL 79
Query: 2590 MVRPQNTLLGMANNILEGGRHENLEIQDTTGDITKKVSIDVPDFDGKIDS*VFIDWLASL 2411
P ANN RH N ++ GD ++ ++P+F G + F+DWL +
Sbjct: 80 EEPPPP-----ANN----PRHHNRNYENF-GDY--RIKAEIPNFWGNLKIEDFLDWLVEV 127
Query: 2410 ERFFDWYNMSDESKVRYIVMKL 2345
ERFFD + + V+ + +L
Sbjct: 128 ERFFDIMEVPEHKMVKMVAFRL 149
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 380 bits (977), Expect(2) = e-107
Identities = 214/502 (42%), Positives = 301/502 (59%), Gaps = 39/502 (7%)
Frame = -1
Query: 1391 FHHASYTDSIWCDVIPMTITHILLGRQWLYDREVKH-NRKNTHSFKFNKKKIVLRPLTAE 1215
F Y D++ CDV PMT+ H+LLGR W YDR H R N ++ K+ K+++L+P+T +
Sbjct: 531 FKIGEYIDTMECDVAPMTVCHMLLGRPWQYDRSSLHCGRTNQYTIKWKGKELILKPMTPQ 590
Query: 1214 EM--------NEYRGKRPSKHEETQSKA--KMLSKK-KPLQVFNKK---------TLEKE 1095
++ +E R + + ++ A K +S+ KP NKK + E
Sbjct: 591 QILAEHLQKSSEVRNESAKEGQKNNLSAPHKSVSESHKPNMRDNKKREGENLVMIATKSE 650
Query: 1094 ARETG-----TIFMVVVKDVSPTQANLEDFSPELKQLLADFSDVAPEDLPKGLPPMRNIQ 930
R+ +F++V KD + +L + ++L ++ DV PE+ P GLPP+R I+
Sbjct: 651 MRDVRRNPEQVLFILVCKDTLLSANDLTSVPSVVARVLQEYEDVFPEETPVGLPPLRGIE 710
Query: 929 HATDFVPGSQLPNLPPYHMSPAAHAELKRQVEELLDKGLIQECLTPCAVPALLTPKKDGT 750
H D +PG+ LPN P Y +P E++RQV+ LLDKG ++E L+PCAVP +L PKKDG+
Sbjct: 711 HQIDLIPGATLPNRPAYRTNPEETKEIQRQVQALLDKGYVRESLSPCAVPVILVPKKDGS 770
Query: 749 WRMCCDCRAINKITVKYRLPIPRLDDMLGMMADSTIYSKIDLTKGCYPLRIRPGDE*KTT 570
WRMC DCRAIN ITV+YR PIPRLDDML ++ S I+SKIDL G + +R++ GDE KT
Sbjct: 771 WRMCVDCRAINNITVRYRHPIPRLDDMLDELSGSMIFSKIDLRSGFHQIRMKIGDEWKTA 830
Query: 569 FETKDGLYEWLVMPFGLANAASTFVRFMTQVLQHLLG---ISLWYILMIYS-----FIVR 414
F+TK GLYEWLVMPFGL NA STF+R M VL+ +G + + ++IYS +
Sbjct: 831 FKTKFGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILIYSKTLEEHVAH 890
Query: 413 LKMSI*ITFKKF*SIASRKTIHQPEEVLF----VSAKGIEVDPNNFMAILDWPLLTTSRE 246
++ + + K+ K ++V+F VS GI+VD + AI DWP +
Sbjct: 891 IQQVLDVLRKEQLYANLEKCTFCTDQVVFLGFVVSGLGIQVDESKVKAIKDWPTPENVSQ 950
Query: 245 FLSFHGLATFYRRFIRNFSTLVAPITDCLKKG-QFSWTSAATKEFKEVKKRMTKALV*HL 69
SF GLA FYRRF+R FST+ AP+ + KKG F W K F+E+KKR+++ + L
Sbjct: 951 VKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGEPQEKAFQELKKRLSEGPLLVL 1010
Query: 68 PDFSKIFEVACDASNIGIGGVL 3
PDF+K FEV CDAS IGIGGVL
Sbjct: 1011 PDFTKTFEVECDASGIGIGGVL 1032
Score = 40.0 bits (92), Expect(2) = e-107
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = -3
Query: 1629 LVVWRILSAPKQQKEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNL 1465
LVV +ILS E+ +R ++FQ D K+IIDGGSC N+ S+ ++ L
Sbjct: 445 LVVTQILSVQMSDAENGQRHNLFQTRAKVQDKVVKVIIDGGSCHNLASKEMVEKL 499
Score = 77.4 bits (189), Expect(3) = 1e-19
Identities = 37/99 (37%), Positives = 61/99 (61%)
Frame = -1
Query: 2288 TWEEMKLELKRKYLPRYYQQDLFDELTTLRQGSLTVIEYMNKFEELKIRCRGTEDSRQTL 2109
+W EMK E++ +++P++Y++DLFD+L L+QGSL+V EY + E+ IR ED Q++
Sbjct: 210 SWAEMKREMRARFVPKHYRRDLFDKLQNLKQGSLSVDEYYKEMEKAMIRANVYEDEEQSI 269
Query: 2108 SRFKQGLRPEIRNQMLTYQVNSIEDAFQLAHMIERNLKQ 1992
+RF GL I+ + Q ++ + A ER L+Q
Sbjct: 270 ARFMSGLHRNIQRIVEFQQYRNLIELVHQASKAERQLQQ 308
Score = 35.8 bits (81), Expect(3) = 1e-19
Identities = 43/180 (23%), Positives = 68/180 (37%), Gaps = 3/180 (1%)
Frame = -2
Query: 1939 TSNTGGTKAQQ*HPPTICQDNIKNKAQVVETRRQDANRECFNCRIRGHYAW*RPKRKNLH 1760
+SN G + + P ++ + V + + + +CF C RGH A P + +
Sbjct: 349 SSNYGTSSGKDLAAPNERKNAANTSSTSVGSSTKSSGIQCFKCGGRGHVARECPNNRTIV 408
Query: 1759 V---GVDLNVEEQEAGDGEEKKADF*DIRLPRR**S*RWGRRLVVPSCCLAYT*CS*AAK 1589
V G + E+E D EE+ L + G LVV A+
Sbjct: 409 VNDQGEYESTSEEEQEDSEEEN------NLEKDICEFESGAALVVTQILSVQMS---DAE 459
Query: 1588 GGLEKNIYFPGHSLLWRHNPKTYY*WG*LYECGVRSYVEKLKLPTEPHPEPYRVAWIDSS 1409
G N+ F + + K G + + VEKL L HP PY V W+++S
Sbjct: 460 NGQRHNL-FQTRAKVQDKVVKVIIDGGSCHNLASKEMVEKLGLKLLKHPHPYHVQWLNNS 518
Score = 33.1 bits (74), Expect(3) = 1e-19
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -2
Query: 2539 GGRHENLEIQDTTGDITKKVSIDVPDFDGKIDS*VFIDWLASLERFFDWYNMSDESKVRY 2360
G R N ++ G K+ +P F+G D V++ W +++ F +N S+ KV
Sbjct: 125 GNRGRNQPNEERFG----KLKFTMPKFEGGSDPEVYLTWELKVDKIFRLHNYSERKKVAM 180
Query: 2359 IVMKLIGQA 2333
++ G A
Sbjct: 181 AALEFDGYA 189
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 367 bits (942), Expect(3) = e-107
Identities = 208/507 (41%), Positives = 298/507 (58%), Gaps = 43/507 (8%)
Frame = -1
Query: 1394 YFHHASYTDSIWCDVIPMTITHILLGRQWLYDREVKH-NRKNTHSFKFNKKKIVLRPLTA 1218
+F SY DSI CDV+PM +LLGR W +D++ H + N +SF N KK+VL P++
Sbjct: 554 HFAIGSYHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHPMSP 613
Query: 1217 EEMNEYRGKRPSKH---EETQSK----AKMLSKKKPLQVFNKKTLEKEARETGTIFMVVV 1059
E + + R SK E T+S+ A L K K + + + E + G+ F+
Sbjct: 614 EVILKDELARASKQKNQEHTRSEHLIAANELEKHKKKPTNSVQNNKNEIKLKGSCFIATK 673
Query: 1058 KDVSPTQAN---------------LED----FSPELKQLLADFSDVAPEDLPKGLPPMRN 936
D+ + +ED P + LL +++D+ P+++P GLPP+R
Sbjct: 674 SDLDEVDTDTVFCYALVCKETLFPIEDTPISLRPPVTNLLQEYADIFPKEVPPGLPPIRG 733
Query: 935 IQHATDFVPGSQLPNLPPYHMSPAAHAELKRQVEELLDKGLIQECLTPCAVPALLTPKKD 756
I+H D +PG+ LPN PY +P E++RQV+ELLDKG ++E L+PC+VP LL PKKD
Sbjct: 734 IEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKD 793
Query: 755 GTWRMCCDCRAINKITVKYRLPIPRLDDMLGMMADSTIYSKIDLTKGCYPLRIRPGDE*K 576
G+WRMC DCRAIN IT++YR PIPRLDDML ++ S ++SKIDL G + +R++ GDE K
Sbjct: 794 GSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWK 853
Query: 575 TTFETKDGLYEWLVMPFGLANAASTFVRFMTQVLQHLLGISLWYILMIYSFIVRLKMSI* 396
T F+TK GLYEWLVMPFGL NA STF+R M +VL+ +G ++++ + I+ SI
Sbjct: 854 TAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIG---RFVVVYFDDILIYSRSIE 910
Query: 395 ITF----KKF*SIASRKTIHQPEEVLF-----------VSAKGIEVDPNNFMAILDWPLL 261
F ++ + E+ F V+ +GIEVD AI WP+
Sbjct: 911 DHHGHLRAVFDALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHSWPVP 970
Query: 260 TTSREFLSFHGLATFYRRFIRNFSTLVAPITDCLKKG-QFSWTSAATKEFKEVKKRMTKA 84
TT + SF GLA FYRRF+++FST+ AP+ + K+ F+W +A F +K ++T A
Sbjct: 971 TTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAAAQRNAFDTLKDKLTHA 1030
Query: 83 LV*HLPDFSKIFEVACDASNIGIGGVL 3
+ LPDF+K FE+ CDAS IG+GGVL
Sbjct: 1031 PLLQLPDFNKTFELECDASGIGLGGVL 1057
Score = 38.9 bits (89), Expect(3) = e-107
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -2
Query: 1477 VEKLKLPTEPHPEPYRVAWIDSS-SIPVNTFTMLHTLI 1367
VEKL L T+PHP+PY + W++SS + V +H I
Sbjct: 520 VEKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAI 557
Score = 36.2 bits (82), Expect(3) = e-107
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = -3
Query: 1629 LVVWRILSAPKQQKEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNL 1465
LVV R+LSA ++ E + ++FQ + + +IIDGGSC N+ S ++ L
Sbjct: 469 LVVQRVLSAQMERAEQNQLHTLFQTKCVIKERSCHVIIDGGSCNNLASAEMVEKL 523
Score = 64.7 bits (156), Expect(2) = 6e-11
Identities = 36/111 (32%), Positives = 59/111 (53%)
Frame = -1
Query: 2303 SNYSVTWEEMKLELKRKYLPRYYQQDLFDELTTLRQGSLTVIEYMNKFEELKIRCRGTED 2124
+N TW+ MK ++ +++P Y+ +DL +L LRQG+ +V EY + +RC E+
Sbjct: 217 NNTPQTWDAMKRVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQIGMLRCGLVEN 276
Query: 2123 SRQTLSRFKQGLRPEIRNQMLTYQVNSIEDAFQLAHMIERNLKQPARRFPT 1971
++RF GL EI++ + + NSI F LA ER ++ F T
Sbjct: 277 DDAGMARFMGGLNREIQDILAYKEYNSINRLFHLACKAEREVQGRRASFRT 327
Score = 32.3 bits (72), Expect(2) = 6e-11
Identities = 21/87 (24%), Positives = 41/87 (47%)
Frame = -2
Query: 2623 AETTENNPAQIMVRPQNTLLGMANNILEGGRHENLEIQDTTGDITKKVSIDVPDFDGKID 2444
A TE++ +++ RPQ + + R E + D+ G K+ +P FDGK D
Sbjct: 113 AADTEHDE-EVLGRPQRQQRRQRHGMGAPPRREVRDNDDSLG----KIKFTIPCFDGKYD 167
Query: 2443 S*VFIDWLASLERFFDWYNMSDESKVR 2363
++ W ++ + F ++ + +VR
Sbjct: 168 PDAYLTWELAIVQKFACHDFPENKRVR 194
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 366 bits (940), Expect(3) = e-107
Identities = 200/489 (40%), Positives = 290/489 (59%), Gaps = 26/489 (5%)
Frame = -1
Query: 1391 FHHASYTDSIWCDVIPMTITHILLGRQWLYDRE-VKHNRKNTHSFKFNKKKIVLRPLTAE 1215
F +Y D + CDV+PM +ILLGR W +DR+ + H R N +SF ++ KKIVL ++ E
Sbjct: 544 FAIGNYHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHSMSPE 603
Query: 1214 EMNEYRGKRPSKHEETQSKAKMLSKKKPLQV--------FNKKTLEKEARETGTIFMVVV 1059
++ + +K + K KKP + K + + + +V
Sbjct: 604 DILRDDVAKAAKSKCESDKKAQSDGKKPETINLKPKCLLATKSDINELIASPSVAYALVC 663
Query: 1058 KDVSPTQANLE-DFSPELKQLLADFSDVAPEDLPKGLPPMRNIQHATDFVPGSQLPNLPP 882
KD + +++ P + +L ++SDV P+++P GLPP+R I+H D +PG+ LPN P
Sbjct: 664 KDALISLHDMQHSLPPAVANILQEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAP 723
Query: 881 YHMSPAAHAELKRQVEELLDKGLIQECLTPCAVPALLTPKKDGTWRMCCDCRAINKITVK 702
Y +P E++RQV ELLDKG ++E L+PCAVP +L PKKDG+WRMC DCRAIN IT++
Sbjct: 724 YRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIR 783
Query: 701 YRLPIPRLDDMLGMMADSTIYSKIDLTKGCYPLRIRPGDE*KTTFETKDGLYEWLVMPFG 522
YR PIPRLDDML ++ S ++SK+DL G + +R++ GDE KT F+TK GLYEWLVMPFG
Sbjct: 784 YRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFG 843
Query: 521 LANAASTFVRFMTQVLQHLLGISLWYILMIYSFIVRLKMSI*ITFKK----F*SIASRKT 354
L NA STF+R M +VL+ +G ++++ + I+ S+ F F ++ +
Sbjct: 844 LTNAPSTFMRLMNEVLRPFIG---KFVVVYFDDILIYSKSMGEHFNHLRAVFNALRDARL 900
Query: 353 IHQPEEVLF-----------VSAKGIEVDPNNFMAILDWPLLTTSREFLSFHGLATFYRR 207
E+ F V+ +GIEVD AI WP T + SF GLA FYRR
Sbjct: 901 FGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIQSWPTPKTVSQVRSFLGLAGFYRR 960
Query: 206 FIRNFSTLVAPITDCLKKG-QFSWTSAATKEFKEVKKRMTKALV*HLPDFSKIFEVACDA 30
F+++FST+ AP+ KKG F+W ++ F +K ++T A + LPDF+K FE+ CDA
Sbjct: 961 FVQDFSTIAAPLNVLTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDA 1020
Query: 29 SNIGIGGVL 3
S IG+GGVL
Sbjct: 1021 SGIGLGGVL 1029
Score = 39.7 bits (91), Expect(3) = e-107
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = -3
Query: 1629 LVVWRILSAPKQQKEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNL 1465
L+V R+LSA ++ E +R ++FQ + ++IIDGGSC N+ S ++ L
Sbjct: 458 LIVQRVLSAQMEKAEQNQRHTLFQTKCVVKERCCRMIIDGGSCNNLASSEMVEKL 512
Score = 35.8 bits (81), Expect(3) = e-107
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -2
Query: 1477 VEKLKLPTEPHPEPYRVAWIDSS 1409
VEKL L T+PHP PY + W+++S
Sbjct: 509 VEKLALSTKPHPHPYYIQWLNNS 531
Score = 101 bits (252), Expect = 2e-18
Identities = 73/199 (36%), Positives = 107/199 (53%), Gaps = 15/199 (7%)
Frame = -1
Query: 554 GLYEWLVMPFGLANAASTFVRFMTQV-LQHLLGISLWYI--LMIYS-------FIVRLKM 405
GLYE+ VM FGL NA + F+ M +V +++L + +I +++YS +RL +
Sbjct: 1625 GLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILVYSQSEEDHQHHLRLVL 1684
Query: 404 SI*ITFKKF*SIASRKTIHQPEEVLF----VSAKGIEVDPNNFMAILDWPLLTTSREFLS 237
+ + ++ K EV F +SAKG+ VDP A+ DW T + S
Sbjct: 1685 GKLREHQLYAKLS--KCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRS 1742
Query: 236 FHGLATFYRRFIRNFSTLVAPITDCLKKGQ-FSWTSAATKEFKEVKKRMTKALV*HLPDF 60
F GLA +YRRFI NFS + P+T LKK + F W+ K F+ +K+++ + V LPD
Sbjct: 1743 FLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSPVLILPDT 1802
Query: 59 SKIFEVACDASNIGIGGVL 3
K F V CDAS G+G VL
Sbjct: 1803 RKDFMVYCDASPQGLGCVL 1821
Score = 58.9 bits (141), Expect(2) = 1e-09
Identities = 35/113 (30%), Positives = 58/113 (51%)
Frame = -1
Query: 2303 SNYSVTWEEMKLELKRKYLPRYYQQDLFDELTTLRQGSLTVIEYMNKFEELKIRCRGTED 2124
+N TW+ +K ++ +++P YY +DL + L LRQG+ +V EY + + +RC E
Sbjct: 215 NNMPQTWDALKRVMRARFVPSYYARDLLNRLQQLRQGAKSVEEYYQELQMGLLRCNLEET 274
Query: 2123 SRQTLSRFKQGLRPEIRNQMLTYQVNSIEDAFQLAHMIERNLKQPARRFPTKA 1965
++RF GL EI + + ++ F LA ER ++ RR KA
Sbjct: 275 EDAAMARFLGGLNREIYDIVDYKDYTNMTRLFHLACKAEREVQ--GRRASAKA 325
Score = 33.5 bits (75), Expect(2) = 1e-09
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = -2
Query: 2539 GGRHENLEIQDTTGDITKKVSIDVPDFDGKIDS*VFIDWLASLERFFDWYNMSDESKVR 2363
GGR E+++ D K+ +P FDGK D ++ W ++++ F + + ++VR
Sbjct: 136 GGRRRR-EVRNND-DAFSKIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPESTRVR 192
>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
Length = 1004
Score = 372 bits (955), Expect(3) = e-107
Identities = 205/490 (41%), Positives = 298/490 (60%), Gaps = 27/490 (5%)
Frame = -1
Query: 1391 FHHASYTDSIWCDVIPMTITHILLGRQWLYDREVKHNR-KNTHSFKFNKKKIVLRPLTAE 1215
F Y D + CDV+PM +H+LLGR W +DR+ H+ N +SF ++ +KI L PL
Sbjct: 430 FKIGKYEDVVLCDVVPMEASHLLLGRPWQFDRKANHDGYSNKYSFMYHDQKINLVPLNPS 489
Query: 1214 EMNEYRGKRPSKHE----ETQSKAKMLSKKKPLQVFNKKTLEKEARETGT-------IFM 1068
E+ E + K K++ E + + + KKK + K++L + R+ +++
Sbjct: 490 EVREDQRKMSEKYDQERKEKEKEKEKNEKKKNDKREKKQSLIAKIRDVKEAIVSHQPLYL 549
Query: 1067 VVVKDVS--PTQANLEDFSPELKQLLADFSDVAPEDLPKGLPPMRNIQHATDFVPGSQLP 894
+ K+V T +N + ++ LL +F ++ PE++P GLPP+R I+H D PG+ LP
Sbjct: 550 LFCKEVPLLTTISNEKKLPNCIESLLQEFKELFPEEVPSGLPPIRGIEHHIDLNPGASLP 609
Query: 893 NLPPYHMSPAAHAELKRQVEELLDKGLIQECLTPCAVPALLTPKKDGTWRMCCDCRAINK 714
N P Y +P E++RQV EL+ KG ++E L+PCAVP +L PKKDG+WRMC DCRAI+
Sbjct: 610 NRPAYRSNPQQTQEIQRQVAELISKGWVRESLSPCAVPIILVPKKDGSWRMCTDCRAISN 669
Query: 713 ITVKYRLPIPRLDDMLGMMADSTIYSKIDLTKGCYPLRIRPGDE*KTTFETKDGLYEWLV 534
IT+KYR PIPRLDD+L + + ++SKIDL G + +RIR GDE KT F+TK GLYEW+V
Sbjct: 670 ITIKYRHPIPRLDDLLDELFGACLFSKIDLKSGYHQIRIREGDEWKTAFKTKFGLYEWMV 729
Query: 533 MPFGLANAASTFVRFMTQVLQHLLG---ISLWYILMIYS-----FIVRLKMSI*ITFKKF 378
MPFGL NA STF+R M VL+ LG + + ++IYS + LK + + +
Sbjct: 730 MPFGLTNAPSTFMRLMNHVLREFLGKFVVVYFDDILIYSKNLDDHCIHLKAVLQVLRYEN 789
Query: 377 *SIASRKTIHQPEEVLF----VSAKGIEVDPNNFMAILDWPLLTTSREFLSFHGLATFYR 210
K + + V+F VS+KG+ VD AI +WP E SFHGLA+FYR
Sbjct: 790 LYANLEKCVFCTDHVIFLGFIVSSKGVHVDEEKVKAIREWPPPKNVSEVRSFHGLASFYR 849
Query: 209 RFIRNFSTLVAPITDCLKKG-QFSWTSAATKEFKEVKKRMTKALV*HLPDFSKIFEVACD 33
RF+++FSTL AP+ + ++K F W + F +K+++T+A V LP+FSK FE+ CD
Sbjct: 850 RFVKDFSTLAAPLNEIVEKDVGFKWGEKQEQAFAALKEKLTQAPVLALPNFSKSFEIECD 909
Query: 32 ASNIGIGGVL 3
ASN+GIG VL
Sbjct: 910 ASNVGIGAVL 919
Score = 35.8 bits (81), Expect(3) = e-107
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = -2
Query: 1477 VEKLKLPTEPHPEPYRVAWIDSS 1409
V +LKL T+PHP+PY++ W++ S
Sbjct: 395 VSRLKLETKPHPKPYKLQWLNES 417
Score = 33.1 bits (74), Expect(3) = e-107
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -3
Query: 1632 LLVVWRILSAPKQQKEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNL 1465
LL+V R+L + ++++ +R ++F LIIDGGSC NV S + L
Sbjct: 343 LLMVRRMLGSQIKEEDTSQRENLFHIRCFVQGKVCSLIIDGGSCTNVASTRLVSRL 398
Score = 73.2 bits (178), Expect(2) = 1e-16
Identities = 36/102 (35%), Positives = 61/102 (59%)
Frame = -1
Query: 2288 TWEEMKLELKRKYLPRYYQQDLFDELTTLRQGSLTVIEYMNKFEELKIRCRGTEDSRQTL 2109
TWEEMK ++R+++P YY ++L ++L L QGS +V EY + E LKIR ED T+
Sbjct: 142 TWEEMKRIMRRRFVPSYYHRELHNKLQRLTQGSKSVEEYFKEMEVLKIRANVEEDDEATM 201
Query: 2108 SRFKQGLRPEIRNQMLTYQVNSIEDAFQLAHMIERNLKQPAR 1983
+RF GL +I + + + +++ A +E+ LK+ ++
Sbjct: 202 ARFLHGLNHDISDIVELHHYVEMDELVHQAIKVEQQLKRKSQ 243
Score = 42.7 bits (99), Expect(2) = 1e-16
Identities = 32/107 (29%), Positives = 50/107 (46%)
Frame = -2
Query: 2683 KDNKKQVEEEEGSQNSGPLQAETTENNPAQIMVRPQNTLLGMANNILEGGRHENLEIQDT 2504
+DN +++ E+G Q LQ E + RPQN+ G G E +
Sbjct: 20 RDNFERLLREQGEQ----LQQRIDE-----LERRPQNSNDG------SGDEEERRRRRRQ 64
Query: 2503 TGDITKKVSIDVPDFDGKIDS*VFIDWLASLERFFDWYNMSDESKVR 2363
GD + + I VP F GK D +++W LE+ F+ +N S+ KV+
Sbjct: 65 GGDNLRGIKIKVPTFVGKSDPEAYLEWETKLEQIFNCHNYSNLEKVQ 111
>gb|EMJ21939.1| hypothetical protein PRUPE_ppa023598mg [Prunus persica]
Length = 1457
Score = 383 bits (983), Expect(2) = e-107
Identities = 209/471 (44%), Positives = 287/471 (60%), Gaps = 13/471 (2%)
Frame = -1
Query: 1376 YTDSIWCDVIPMTITHILLGRQWLYDREVKHN-RKNTHSFKFNKKKIVLRPLTAEEMNEY 1200
Y D + CDVI M HILLG+ W +D + + R N F +N +KI +
Sbjct: 470 YIDDVLCDVIDMDACHILLGQLWQFDVDATYKGRDNVILFSWNNRKIAMATT-------- 521
Query: 1199 RGKRPSKHEETQSKAKMLSKKKPLQVFNKKTLEKEARETGTIFMVVVKDVSPTQANLEDF 1020
+PSK + K S + +++ L K +E +V+K + D
Sbjct: 522 ---KPSKQSV---EPKTRSSSFLTLISSEQELNKVVKEAEYFCPLVLKGLLKLGRGESDI 575
Query: 1019 SPELKQLLADFSDVAPEDLPKGLPPMRNIQHATDFVPGSQLPNLPPYHMSPAAHAELKRQ 840
+++++L+ F ++ E LP LP MR+IQH D VPG+ LPNLP Y MSP + L+ Q
Sbjct: 576 PQDVQKILSQFQELLSEKLPNELPSMRDIQHRIDLVPGANLPNLPHYRMSPKENDILREQ 635
Query: 839 VEELLDKGLIQECLTPCAVPALLTPKKDGTWRMCCDCRAINKITVKYRLPIPRLDDMLGM 660
+EELL KG I+E L+PCAVP LL PKKD TWRMC D RAINKITVK R PIPRL+DML +
Sbjct: 636 IEELLQKGFIRESLSPCAVPVLLVPKKDKTWRMCVDSRAINKITVKSRFPIPRLEDMLDV 695
Query: 659 MADSTIYSKIDLTKGCYPLRIRPGDE*KTTFETKDGLYEWLVMPFGLANAASTFVRFMTQ 480
++ S ++SKIDL G + +RIRPGDE KT F++KDGL+EWLVMPFGL+NA STF+R M Q
Sbjct: 696 LSGSRVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGLFEWLVMPFGLSNAPSTFMRLMNQ 755
Query: 479 VLQHLLG---ISLWYILMIYS-----FIVRLKMSI*ITFKKF*SIASRKTIHQPEEVLF- 327
VL+ +G + + ++IYS +V L+ + + + + +K ++LF
Sbjct: 756 VLRPFIGSFVVVYFDDILIYSTTKEEHLVHLRQVLDVLRENKLYMNLKKCTFCTNKLLFL 815
Query: 326 ---VSAKGIEVDPNNFMAILDWPLLTTSREFLSFHGLATFYRRFIRNFSTLVAPITDCLK 156
V GI+VD AILDWP E SFHGLATFYRRF+R+FS++ APIT+CLK
Sbjct: 816 GFVVGENGIQVDDEKIKAILDWPTPKIVSEVRSFHGLATFYRRFVRHFSSITAPITECLK 875
Query: 155 KGQFSWTSAATKEFKEVKKRMTKALV*HLPDFSKIFEVACDASNIGIGGVL 3
KG+FSW + F ++K+++ A V LP+F K+FEV CDAS +G+G VL
Sbjct: 876 KGRFSWGDEQERSFADIKEKLCTAPVLALPNFEKVFEVECDASGVGVGAVL 926
Score = 36.2 bits (82), Expect(2) = e-107
Identities = 25/70 (35%), Positives = 38/70 (54%)
Frame = -3
Query: 1632 LLVVWRILSAPKQQKEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNLNYLQ 1453
+LV+ R+L APK E+ +R SI +++ + +I+D GSC N VS+ L
Sbjct: 380 ILVLQRVLLAPK---EEGQRHSICRSLCSIKNKVCDVIVDNGSCENFVSKK-------LV 429
Query: 1452 NHIQNLTELH 1423
H+Q TE H
Sbjct: 430 EHLQLSTEPH 439
Score = 56.6 bits (135), Expect(2) = 2e-10
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Frame = -1
Query: 2288 TWEEMKLELKRKYLPRYYQQDLFDELTTLRQGSLTVIEYMNKFEELKIRCRGTEDSRQTL 2109
TW +MK + ++LP Y+Q L+ QG+ +V EY +F L R TE Q +
Sbjct: 150 TWRKMKSLMMERFLPTDYEQILYRMYLGCTQGNRSVSEYTEEFMHLAERNHLTETDNQKV 209
Query: 2108 SRFKQGLRPEIRNQMLTYQVNSIEDAFQL---AHMIERNLKQP-ARRFPTKAGE 1959
+R+ GL+ I+ ++ + ++++A + A ++E+ +QP RR T+A E
Sbjct: 210 ARYNNGLKISIQEKIGMQNIWTLQEAINMAMKAELLEKEKRQPNFRRNTTEASE 263
Score = 38.5 bits (88), Expect(2) = 2e-10
Identities = 29/126 (23%), Positives = 54/126 (42%)
Frame = -2
Query: 2722 KTGAKSEATSSGAKDNKKQVEEEEGSQNSGPLQAETTENNPAQIMVRPQNTLLGMANNIL 2543
+ G + + G +DN+ + + E N ++ + + P ANN
Sbjct: 14 RRGGRDDERREGREDNRTEGRDGERRDNRRQHIPDSESESEEEHEEPPPP-----ANN-- 66
Query: 2542 EGGRHENLEIQDTTGDITKKVSIDVPDFDGKIDS*VFIDWLASLERFFDWYNMSDESKVR 2363
R+ N E GD ++ ++P+F G + F+DWL +ERFFD + + V+
Sbjct: 67 --RRNRNYE---NFGDY--RIKAEIPNFWGNLKIEDFLDWLVEVERFFDIMEVPEHKMVK 119
Query: 2362 YIVMKL 2345
+ +L
Sbjct: 120 MVAFRL 125
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 363 bits (931), Expect(3) = e-107
Identities = 200/488 (40%), Positives = 287/488 (58%), Gaps = 25/488 (5%)
Frame = -1
Query: 1391 FHHASYTDSIWCDVIPMTITHILLGRQWLYDRE-VKHNRKNTHSFKFNKKKIVLRPLTAE 1215
F SY D + CDV+PM +ILLGR W +D + + H R N +S + KKI+L P++ E
Sbjct: 547 FAIGSYRDVVDCDVVPMDACNILLGRPWQFDSDCMHHGRSNQYSLIHHDKKIILLPMSPE 606
Query: 1214 EM-NEYRGKRPSKHEETQSKAKMLSKKKP-------LQVFNKKTLEKEARETGTIFMVVV 1059
+ + K E K++ K + K + + T + +V
Sbjct: 607 AIVRDDVAKATKAKTENNKNIKVVGNNKDGIKLKGHCLLATKTDVNELFASTTVAYALVC 666
Query: 1058 KDVSPTQANLE-DFSPELKQLLADFSDVAPEDLPKGLPPMRNIQHATDFVPGSQLPNLPP 882
KD + +++ P + +L ++SDV P ++P+GLPP+R I+H D +PG+ LPN P
Sbjct: 667 KDALISIQDMQHSLPPVITNILQEYSDVFPSEIPEGLPPIRGIEHQIDLIPGASLPNRAP 726
Query: 881 YHMSPAAHAELKRQVEELLDKGLIQECLTPCAVPALLTPKKDGTWRMCCDCRAINKITVK 702
Y +P E++RQV+ELLDKG ++E L+PCAVP +L PKKDGTWRMC DCRAIN IT++
Sbjct: 727 YRTNPEETKEIQRQVQELLDKGYVRESLSPCAVPVILVPKKDGTWRMCVDCRAINNITIR 786
Query: 701 YRLPIPRLDDMLGMMADSTIYSKIDLTKGCYPLRIRPGDE*KTTFETKDGLYEWLVMPFG 522
YR PIPRLDDML ++ + ++SK+DL G + +R++ GDE KT F+TK GLYEWLVMPFG
Sbjct: 787 YRHPIPRLDDMLDELSGAIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMPFG 846
Query: 521 LANAASTFVRFMTQVLQHLLG---ISLWYILMIYSFIVRLKMSI*ITFKKF*SIASRKTI 351
L NA STF+R M +VL+ +G + + ++IYS + + F ++ +
Sbjct: 847 LTNAPSTFMRLMNEVLRAFIGKFVVVYFDDILIYS--KSMDEHVDHMRAVFNALRDARLF 904
Query: 350 HQPEEVLF-----------VSAKGIEVDPNNFMAILDWPLLTTSREFLSFHGLATFYRRF 204
E+ F V+ +GIEVD AI WP+ T + SF GLA FYRRF
Sbjct: 905 GNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHGWPMPKTITQVRSFLGLAGFYRRF 964
Query: 203 IRNFSTLVAPITDCLKKG-QFSWTSAATKEFKEVKKRMTKALV*HLPDFSKIFEVACDAS 27
+++FST+ AP+ + KKG FSW F +K ++T A + LPDF+K FE+ CDAS
Sbjct: 965 VKDFSTIAAPLNELTKKGVHFSWGKVQEHAFNVLKDKLTHAPLLQLPDFNKTFELECDAS 1024
Query: 26 NIGIGGVL 3
IG+GGVL
Sbjct: 1025 GIGLGGVL 1032
Score = 40.8 bits (94), Expect(3) = e-107
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -3
Query: 1629 LVVWRILSAPKQQKEDWRRTSIFQAIVCCGDITRKLIIDGGSCMNVVSEATLKNL 1465
L+V R+LSA ++ E +R ++FQ + + +LIIDGGSC N+ S ++ L
Sbjct: 461 LIVQRVLSAQMEKAEQNQRHTLFQTKCVIKERSCRLIIDGGSCNNLASSDMVEKL 515
Score = 36.6 bits (83), Expect(3) = e-107
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -2
Query: 1477 VEKLKLPTEPHPEPYRVAWIDSS 1409
VEKL L T+PHP PY + W+++S
Sbjct: 512 VEKLALTTKPHPHPYHIQWLNNS 534
Score = 63.5 bits (153), Expect(2) = 6e-11
Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Frame = -1
Query: 2303 SNYSVTWEEMKLELKRKYLPRYYQQDLFDELTTLRQGSLTVIEYMNKFEELKIRCRGTED 2124
+N TW+ +K ++ +++P YY +D+ ++L LRQG+ +V EY + + +RC E
Sbjct: 209 NNMPQTWDALKRVMRARFVPSYYARDMLNKLQQLRQGTKSVEEYYQELQMGMLRCNIEEG 268
Query: 2123 SRQTLSRFKQGLRPEIRNQMLTYQVNSIEDAFQLAHMIERNL--KQPARRFPTKAGEVTN 1950
++RF GL EI++ + ++ F LA ER + ++ + R AG+ T
Sbjct: 269 EESAMARFLGGLNREIQDILAYKDYANVTRLFHLACKAEREVQGRRASARSNVSAGKST- 327
Query: 1949 TRKYLQHWRHKSSTMTSANNM 1887
W+ +++T + +
Sbjct: 328 ------PWQQRTTTSMTGRTL 342
Score = 33.5 bits (75), Expect(2) = 6e-11
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -2
Query: 2497 DITKKVSIDVPDFDGKIDS*VFIDWLASLERFFDWYNMSDESKVR 2363
D KV +P FDGK D +I W ++++ F + + ++VR
Sbjct: 142 DAFSKVKFKIPPFDGKYDPDAYITWEIAVDQKFACHEFPENARVR 186