BLASTX nr result
ID: Rauwolfia21_contig00013930
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00013930
(495 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ18951.1| hypothetical protein PRUPE_ppa010369mg [Prunus pe... 104 1e-20
gb|ESW07605.1| hypothetical protein PHAVU_010G143300g [Phaseolus... 100 3e-19
ref|XP_006372643.1| RNA polymerase transcriptional regulation me... 100 3e-19
ref|XP_002331927.1| predicted protein [Populus trichocarpa] 100 3e-19
gb|AGZ15418.1| mediator of RNA polymerase II transcription subun... 99 8e-19
ref|XP_006585556.1| PREDICTED: mediator of RNA polymerase II tra... 97 2e-18
gb|EOY26989.1| RNA polymerase transcriptional regulation mediato... 97 2e-18
gb|EOY26988.1| RNA polymerase transcriptional regulation mediato... 97 2e-18
ref|XP_003531638.1| PREDICTED: mediator of RNA polymerase II tra... 97 2e-18
ref|XP_004165668.1| PREDICTED: mediator of RNA polymerase II tra... 97 2e-18
ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ... 97 2e-18
gb|AFK47538.1| unknown [Medicago truncatula] 96 4e-18
emb|CBI36012.3| unnamed protein product [Vitis vinifera] 96 5e-18
ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera... 96 5e-18
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera] 96 5e-18
ref|XP_004297626.1| PREDICTED: mediator of RNA polymerase II tra... 94 2e-17
ref|XP_004510329.1| PREDICTED: mediator of RNA polymerase II tra... 93 3e-17
ref|XP_004510328.1| PREDICTED: mediator of RNA polymerase II tra... 93 3e-17
ref|XP_004252362.1| PREDICTED: mediator of RNA polymerase II tra... 93 4e-17
gb|EXB74612.1| Putative mediator of RNA polymerase II transcript... 92 7e-17
>gb|EMJ18951.1| hypothetical protein PRUPE_ppa010369mg [Prunus persica]
Length = 252
Score = 104 bits (260), Expect = 1e-20
Identities = 56/89 (62%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = -1
Query: 495 VDSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGE 316
VDSENETAA +SK TKETID KE+KRVDHIL S+QRKL TAE E
Sbjct: 163 VDSENETAAFESKVTKETIDFKEVKRVDHILQSLQRKLPPAPPPPPFPEGYVPAPTAEAE 222
Query: 315 KGSENQQV-EPQQPSVDPIIDQGPTKRMK 232
G E QQ EPQQP +DPIIDQGP KRMK
Sbjct: 223 NGPETQQAGEPQQPQMDPIIDQGPAKRMK 251
>gb|ESW07605.1| hypothetical protein PHAVU_010G143300g [Phaseolus vulgaris]
Length = 247
Score = 99.8 bits (247), Expect = 3e-19
Identities = 54/89 (60%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Frame = -1
Query: 495 VDSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGE 316
VDSENETA +SK KETID+KE+KRVDHILAS+QRKL P TAE E
Sbjct: 158 VDSENETALVESKTAKETIDIKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAEAE 217
Query: 315 KGSENQQ-VEPQQPSVDPIIDQGPTKRMK 232
KG+E Q+ E Q P+ DPIIDQGP KRMK
Sbjct: 218 KGTETQEAAETQAPTADPIIDQGPAKRMK 246
>ref|XP_006372643.1| RNA polymerase transcriptional regulation mediator-related family
protein [Populus trichocarpa]
gi|550319272|gb|ERP50440.1| RNA polymerase
transcriptional regulation mediator-related family
protein [Populus trichocarpa]
Length = 259
Score = 99.8 bits (247), Expect = 3e-19
Identities = 55/89 (61%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = -1
Query: 495 VDSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGE 316
VDSENE AAS+SK KE ID KE+KR+DHILAS+QRKL T E E
Sbjct: 170 VDSENEGAASESKTGKEVIDFKEVKRIDHILASLQRKLPPAPPPPSFPEGYVPQPTTEEE 229
Query: 315 KGSENQQ-VEPQQPSVDPIIDQGPTKRMK 232
KG E QQ EPQ PSVDPIIDQGP KRMK
Sbjct: 230 KGPETQQGGEPQLPSVDPIIDQGPAKRMK 258
>ref|XP_002331927.1| predicted protein [Populus trichocarpa]
Length = 235
Score = 99.8 bits (247), Expect = 3e-19
Identities = 55/89 (61%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = -1
Query: 495 VDSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGE 316
VDSENE AAS+SK KE ID KE+KR+DHILAS+QRKL T E E
Sbjct: 146 VDSENEGAASESKTGKEVIDFKEVKRIDHILASLQRKLPPAPPPPSFPEGYVPQPTTEEE 205
Query: 315 KGSENQQ-VEPQQPSVDPIIDQGPTKRMK 232
KG E QQ EPQ PSVDPIIDQGP KRMK
Sbjct: 206 KGPETQQGGEPQLPSVDPIIDQGPAKRMK 234
>gb|AGZ15418.1| mediator of RNA polymerase II transcription subunit 6 [Phaseolus
vulgaris]
Length = 250
Score = 98.6 bits (244), Expect = 8e-19
Identities = 54/89 (60%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = -1
Query: 495 VDSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGE 316
VDSENETA SK KETID+KE+KRVDHILAS+QRKL P TAE E
Sbjct: 161 VDSENETALVGSKTAKETIDIKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAEAE 220
Query: 315 KGSENQQ-VEPQQPSVDPIIDQGPTKRMK 232
KG+E Q+ E Q P+ DPIIDQGP KRMK
Sbjct: 221 KGTETQEAAETQAPTADPIIDQGPAKRMK 249
>ref|XP_006585556.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform X2 [Glycine max]
Length = 249
Score = 97.4 bits (241), Expect = 2e-18
Identities = 53/88 (60%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Frame = -1
Query: 492 DSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGEK 313
DSENETA +SK KETID+KE+KRVDHILAS+QRKL P TAE EK
Sbjct: 161 DSENETALLESKTAKETIDIKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAETEK 220
Query: 312 GSENQQ-VEPQQPSVDPIIDQGPTKRMK 232
G+E Q+ E Q P+ DPIIDQGP KRMK
Sbjct: 221 GTETQEAAETQAPTADPIIDQGPAKRMK 248
>gb|EOY26989.1| RNA polymerase transcriptional regulation mediator-related isoform
2 [Theobroma cacao]
Length = 184
Score = 97.4 bits (241), Expect = 2e-18
Identities = 52/89 (58%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = -1
Query: 495 VDSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGE 316
VD+ENE+ +SK KETID KE+KRVDHILAS+QRKL +TAE E
Sbjct: 95 VDTENESETFESKGGKETIDFKEVKRVDHILASLQRKLPPAPPPPPFPEGFIPLATAEAE 154
Query: 315 KGSENQQ-VEPQQPSVDPIIDQGPTKRMK 232
K ENQQ VE Q P++DPIIDQGP KRMK
Sbjct: 155 KDPENQQAVETQPPAIDPIIDQGPAKRMK 183
>gb|EOY26988.1| RNA polymerase transcriptional regulation mediator-related isoform
1 [Theobroma cacao]
Length = 257
Score = 97.4 bits (241), Expect = 2e-18
Identities = 52/89 (58%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = -1
Query: 495 VDSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGE 316
VD+ENE+ +SK KETID KE+KRVDHILAS+QRKL +TAE E
Sbjct: 168 VDTENESETFESKGGKETIDFKEVKRVDHILASLQRKLPPAPPPPPFPEGFIPLATAEAE 227
Query: 315 KGSENQQ-VEPQQPSVDPIIDQGPTKRMK 232
K ENQQ VE Q P++DPIIDQGP KRMK
Sbjct: 228 KDPENQQAVETQPPAIDPIIDQGPAKRMK 256
>ref|XP_003531638.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform X1 [Glycine max]
Length = 252
Score = 97.4 bits (241), Expect = 2e-18
Identities = 53/88 (60%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Frame = -1
Query: 492 DSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGEK 313
DSENETA +SK KETID+KE+KRVDHILAS+QRKL P TAE EK
Sbjct: 164 DSENETALLESKTAKETIDIKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAETEK 223
Query: 312 GSENQQ-VEPQQPSVDPIIDQGPTKRMK 232
G+E Q+ E Q P+ DPIIDQGP KRMK
Sbjct: 224 GTETQEAAETQAPTADPIIDQGPAKRMK 251
>ref|XP_004165668.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like [Cucumis sativus]
Length = 226
Score = 97.1 bits (240), Expect = 2e-18
Identities = 53/88 (60%), Positives = 59/88 (67%)
Frame = -1
Query: 495 VDSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGE 316
VDSENE+ + K KETI+ KE+KRVDHILAS+QRKL +TAE E
Sbjct: 137 VDSENES--EEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETE 194
Query: 315 KGSENQQVEPQQPSVDPIIDQGPTKRMK 232
KG ENQQ E QQPS DPIIDQGP KRMK
Sbjct: 195 KGPENQQGESQQPSADPIIDQGPAKRMK 222
>ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 6-like [Cucumis sativus]
Length = 260
Score = 97.1 bits (240), Expect = 2e-18
Identities = 53/88 (60%), Positives = 59/88 (67%)
Frame = -1
Query: 495 VDSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGE 316
VDSENE+ + K KETI+ KE+KRVDHILAS+QRKL +TAE E
Sbjct: 171 VDSENES--EEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPFPEGYAPAATAETE 228
Query: 315 KGSENQQVEPQQPSVDPIIDQGPTKRMK 232
KG ENQQ E QQPS DPIIDQGP KRMK
Sbjct: 229 KGPENQQGESQQPSADPIIDQGPAKRMK 256
>gb|AFK47538.1| unknown [Medicago truncatula]
Length = 248
Score = 96.3 bits (238), Expect = 4e-18
Identities = 54/89 (60%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = -1
Query: 495 VDSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGE 316
VDSENET + K KETIDLKEIKRVDHILAS+QRKL PSTAE E
Sbjct: 159 VDSENETTIPEPKVAKETIDLKEIKRVDHILASLQRKLPPAPPPPPFPEGYVPPSTAETE 218
Query: 315 KGSENQQ-VEPQQPSVDPIIDQGPTKRMK 232
KG E Q+ E P+VDPI+DQGP KRMK
Sbjct: 219 KGPETQEAAESLAPTVDPILDQGPAKRMK 247
>emb|CBI36012.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 95.9 bits (237), Expect = 5e-18
Identities = 53/89 (59%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = -1
Query: 495 VDSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGE 316
VD+ENE A +SK KETID KE+ RVD ILAS+QRKL P TAEGE
Sbjct: 137 VDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAPPPPQFPEGYAPPPTAEGE 196
Query: 315 KGSENQQ-VEPQQPSVDPIIDQGPTKRMK 232
KG E QQ EPQ P++DPIIDQGP+KRMK
Sbjct: 197 KGPETQQAAEPQLPALDPIIDQGPSKRMK 225
>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
subunit 6 [Vitis vinifera]
Length = 258
Score = 95.9 bits (237), Expect = 5e-18
Identities = 53/89 (59%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = -1
Query: 495 VDSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGE 316
VD+ENE A +SK KETID KE+ RVD ILAS+QRKL P TAEGE
Sbjct: 169 VDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAPPPPQFPEGYAPPPTAEGE 228
Query: 315 KGSENQQ-VEPQQPSVDPIIDQGPTKRMK 232
KG E QQ EPQ P++DPIIDQGP+KRMK
Sbjct: 229 KGPETQQAAEPQLPALDPIIDQGPSKRMK 257
>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
Length = 253
Score = 95.9 bits (237), Expect = 5e-18
Identities = 53/89 (59%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = -1
Query: 495 VDSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGE 316
VD+ENE A +SK KETID KE+ RVD ILAS+QRKL P TAEGE
Sbjct: 164 VDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAPPAPQFPEGYAPPPTAEGE 223
Query: 315 KGSENQQ-VEPQQPSVDPIIDQGPTKRMK 232
KG E QQ EPQ P++DPIIDQGP+KRMK
Sbjct: 224 KGPETQQAAEPQLPALDPIIDQGPSKRMK 252
>ref|XP_004297626.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like [Fragaria vesca subsp. vesca]
Length = 249
Score = 94.0 bits (232), Expect = 2e-17
Identities = 52/89 (58%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = -1
Query: 495 VDSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGE 316
VD ENETAA + KA+KETIDL+E RV+ IL S+ RKL ST E E
Sbjct: 160 VDPENETAAPEPKASKETIDLREFNRVNQILQSLLRKLPPAPPPPPFPEGYVPVSTGEAE 219
Query: 315 KGSENQQV-EPQQPSVDPIIDQGPTKRMK 232
GSE QQ EPQQP VDPIIDQGP KRMK
Sbjct: 220 NGSETQQAGEPQQPPVDPIIDQGPAKRMK 248
>ref|XP_004510329.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform X2 [Cicer arietinum]
Length = 249
Score = 93.2 bits (230), Expect = 3e-17
Identities = 53/90 (58%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Frame = -1
Query: 495 VDSENETAASDSKA-TKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEG 319
VDSEN+T + KA +KET+D+KE+KRVDHILAS+Q KL PSTAE
Sbjct: 159 VDSENDTTLPEPKAASKETVDIKELKRVDHILASLQHKLPPAPPPPPFPEGYVPPSTAET 218
Query: 318 EKGSENQQ-VEPQQPSVDPIIDQGPTKRMK 232
EKG E Q+ E Q PSVDPIIDQGP KRMK
Sbjct: 219 EKGPETQEATESQAPSVDPIIDQGPAKRMK 248
>ref|XP_004510328.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform X1 [Cicer arietinum]
Length = 252
Score = 93.2 bits (230), Expect = 3e-17
Identities = 53/90 (58%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Frame = -1
Query: 495 VDSENETAASDSKA-TKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEG 319
VDSEN+T + KA +KET+D+KE+KRVDHILAS+Q KL PSTAE
Sbjct: 162 VDSENDTTLPEPKAASKETVDIKELKRVDHILASLQHKLPPAPPPPPFPEGYVPPSTAET 221
Query: 318 EKGSENQQ-VEPQQPSVDPIIDQGPTKRMK 232
EKG E Q+ E Q PSVDPIIDQGP KRMK
Sbjct: 222 EKGPETQEATESQAPSVDPIIDQGPAKRMK 251
>ref|XP_004252362.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform 1 [Solanum lycopersicum]
Length = 251
Score = 92.8 bits (229), Expect = 4e-17
Identities = 53/89 (59%), Positives = 60/89 (67%)
Frame = -1
Query: 495 VDSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGE 316
V SENE+AAS+ KA KETID KE+KRVDHI AS+QR L PSTAE
Sbjct: 166 VASENESAASEPKAAKETIDFKELKRVDHIFASLQRTLPPVPPPPPFPEGYVPPSTAE-- 223
Query: 315 KGSENQQVEPQQPSVDPIIDQGPTKRMKL 229
SEN+Q E Q P VDPIIDQGP+KRMK+
Sbjct: 224 -ASENEQEETQLPPVDPIIDQGPSKRMKV 251
>gb|EXB74612.1| Putative mediator of RNA polymerase II transcription subunit 6
[Morus notabilis]
Length = 251
Score = 92.0 bits (227), Expect = 7e-17
Identities = 52/89 (58%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = -1
Query: 495 VDSENETAASDSKATKETIDLKEIKRVDHILASMQRKLXXXXXXXXXXXXXXXPSTAEGE 316
VDSENE A DSK KETID KE+KR+DHILAS+QRKL P A+ E
Sbjct: 162 VDSENENAPLDSKIGKETIDFKEMKRIDHILASLQRKLPPAPPPPPFPEGYVPPQNADSE 221
Query: 315 KGSENQQV-EPQQPSVDPIIDQGPTKRMK 232
KG E QQ E QQ VDPIIDQGP KRM+
Sbjct: 222 KGPEAQQAGEAQQAPVDPIIDQGPAKRMR 250