BLASTX nr result
ID: Rauwolfia21_contig00013919
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00013919
(1018 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-li... 308 3e-81
ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|2235... 297 5e-78
gb|EOY16567.1| Polynucleotidyl transferase, ribonuclease H-like ... 296 9e-78
emb|CBI19949.3| unnamed protein product [Vitis vinifera] 296 9e-78
gb|EXB99571.1| Small RNA degrading nuclease 5 [Morus notabilis] 291 2e-76
ref|XP_006356308.1| PREDICTED: small RNA degrading nuclease 5-li... 286 9e-75
gb|EMJ00190.1| hypothetical protein PRUPE_ppa003497mg [Prunus pe... 286 1e-74
ref|XP_004237720.1| PREDICTED: small RNA degrading nuclease 5-li... 285 2e-74
ref|XP_006472902.1| PREDICTED: small RNA degrading nuclease 5-li... 284 4e-74
ref|XP_006434348.1| hypothetical protein CICLE_v10000720mg [Citr... 284 4e-74
ref|XP_006593769.1| PREDICTED: small RNA degrading nuclease 5-li... 275 2e-71
emb|CAN72872.1| hypothetical protein VITISV_030007 [Vitis vinifera] 275 2e-71
ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-li... 275 2e-71
ref|XP_002300948.1| exonuclease family protein [Populus trichoca... 273 1e-70
ref|NP_197952.2| polynucleotidyl transferase, ribonuclease H-lik... 272 1e-70
ref|XP_004146782.1| PREDICTED: small RNA degrading nuclease 5-li... 271 3e-70
gb|ESW33378.1| hypothetical protein PHAVU_001G064400g [Phaseolus... 268 3e-69
ref|XP_002307475.1| exonuclease family protein [Populus trichoca... 267 6e-69
ref|XP_006394828.1| hypothetical protein EUTSA_v10003904mg [Eutr... 266 1e-68
ref|XP_004498375.1| PREDICTED: small RNA degrading nuclease 5-li... 264 5e-68
>ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-like [Vitis vinifera]
Length = 572
Score = 308 bits (788), Expect = 3e-81
Identities = 150/207 (72%), Positives = 178/207 (85%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDD 180
ALLKIRHGP+FGSPPSF+RKKLLTVL +YGK SS ID+ISIV+RY S+ S++ PVSSD +
Sbjct: 366 ALLKIRHGPEFGSPPSFMRKKLLTVLNDYGKTSSFIDDISIVRRYTSEASHAFPVSSDVE 425
Query: 181 ALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKS 360
ALSKA+KEV+NDKVHF+WTQFSELN YFK+ A+D +K N KLAEMI++LTC++K K
Sbjct: 426 ALSKAKKEVKNDKVHFVWTQFSELNSYFKKQAEDTDKLNAKLAEMISLLTCNKKSTTPKG 485
Query: 361 IRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETAL 540
I+++VT ELKDIL+ +D RIR L+ LP NTM IICTGHGDTAIVHRLRK+L EQ ET +
Sbjct: 486 IKFSVTSELKDILTCIDTRIRSLYHELPANTMLIICTGHGDTAIVHRLRKMLREQIETTV 545
Query: 541 SRDKLVKVLEELQAQAEVGLCFVGVKH 621
SR+KLVKVLEELQAQAEV LCFVGVKH
Sbjct: 546 SREKLVKVLEELQAQAEVALCFVGVKH 572
>ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|223540467|gb|EEF42034.1|
rnase h, putative [Ricinus communis]
Length = 572
Score = 297 bits (760), Expect = 5e-78
Identities = 146/207 (70%), Positives = 176/207 (85%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDD 180
ALLKI++GPDFGSPPSF+R+KLLT+L E GKASS+ID++SIVKRYAS+ S++ PVSSDDD
Sbjct: 366 ALLKIKNGPDFGSPPSFVRRKLLTILSESGKASSVIDDVSIVKRYASESSHAFPVSSDDD 425
Query: 181 ALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKS 360
ALSKA KEV+ND+VHF+WTQ SELN YFK+ ADD K N KLAEMI++LTC +K K
Sbjct: 426 ALSKALKEVKNDRVHFVWTQLSELNSYFKKQADDEGKVNAKLAEMISLLTCQKKSANTKG 485
Query: 361 IRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETAL 540
+R ++T ELK+IL RMD R+R L+S+LP NTM IICTGHGDTAIV RLRKLL E+ ET +
Sbjct: 486 VRCSMTSELKEILIRMDARVRCLYSALPTNTMLIICTGHGDTAIVRRLRKLLTEKQETRI 545
Query: 541 SRDKLVKVLEELQAQAEVGLCFVGVKH 621
R+K+VKVLEELQAQAEV LCFVGVK+
Sbjct: 546 CREKIVKVLEELQAQAEVALCFVGVKN 572
>gb|EOY16567.1| Polynucleotidyl transferase, ribonuclease H-like superfamily
protein isoform 1 [Theobroma cacao]
Length = 565
Score = 296 bits (758), Expect = 9e-78
Identities = 143/207 (69%), Positives = 178/207 (85%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDD 180
ALLKI++GPDFGSPPS +R+KLL++LGE GK SS ID+ISIVKRYAS+ S++IPV SDD+
Sbjct: 359 ALLKIKNGPDFGSPPSLMRRKLLSLLGECGKTSSFIDDISIVKRYASESSHAIPVCSDDE 418
Query: 181 ALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKS 360
AL KARKEV+ND+VHF+WT FSELN YF++ A+D K N KLAEMI++LTC +KP K
Sbjct: 419 ALLKARKEVKNDRVHFVWTHFSELNSYFRKQAEDDVKLNGKLAEMISLLTCDKKPANWKG 478
Query: 361 IRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETAL 540
I+ NV+ ELK+IL+R++ R+ LH++LP N+MFIICTGHGD AIVHRLRK+L EQ+ET +
Sbjct: 479 IKNNVSTELKEILTRINARVYSLHTALPTNSMFIICTGHGDIAIVHRLRKMLTEQSETTV 538
Query: 541 SRDKLVKVLEELQAQAEVGLCFVGVKH 621
SR+KLVKVLEELQAQAEV LCFVG+KH
Sbjct: 539 SREKLVKVLEELQAQAEVALCFVGMKH 565
>emb|CBI19949.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 296 bits (758), Expect = 9e-78
Identities = 143/202 (70%), Positives = 173/202 (85%)
Frame = +1
Query: 16 RHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDDALSKA 195
++GP+FGSPPSF+RKKLLTVL +YGK SS ID+ISIV+RY S+ S++ PVSSD +ALSKA
Sbjct: 371 KYGPEFGSPPSFMRKKLLTVLNDYGKTSSFIDDISIVRRYTSEASHAFPVSSDVEALSKA 430
Query: 196 RKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKSIRYNV 375
+KEV+NDKVHF+WTQFSELN YFK+ A+D +K N KLAEMI++LTC++K K I+++V
Sbjct: 431 KKEVKNDKVHFVWTQFSELNSYFKKQAEDTDKLNAKLAEMISLLTCNKKSTTPKGIKFSV 490
Query: 376 TPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETALSRDKL 555
T ELKDIL+ +D RIR L+ LP NTM IICTGHGDTAIVHRLRK+L EQ ET +SR+KL
Sbjct: 491 TSELKDILTCIDTRIRSLYHELPANTMLIICTGHGDTAIVHRLRKMLREQIETTVSREKL 550
Query: 556 VKVLEELQAQAEVGLCFVGVKH 621
VKVLEELQAQAEV LCFVGVKH
Sbjct: 551 VKVLEELQAQAEVALCFVGVKH 572
>gb|EXB99571.1| Small RNA degrading nuclease 5 [Morus notabilis]
Length = 555
Score = 291 bits (746), Expect = 2e-76
Identities = 145/209 (69%), Positives = 178/209 (85%), Gaps = 2/209 (0%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDD 180
ALLKI+HGPDFGSPPS +RKKLLTVL + GK SSIID++SIVKRYAS+ S+ IPVSSD++
Sbjct: 348 ALLKIKHGPDFGSPPSLMRKKLLTVLSDCGKISSIIDDVSIVKRYASESSHVIPVSSDEE 407
Query: 181 ALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKS 360
ALSKA+KEV+N++VHF+WTQFSELN YFK+ A D EK N KLAEM+++LTC + +K
Sbjct: 408 ALSKAQKEVKNERVHFVWTQFSELNSYFKKQAGDPEKLNAKLAEMMSLLTCKSSAS-KKG 466
Query: 361 IRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTE--T 534
+ VTPELK+IL+RMD RIR LH++LP NTM I+CTGHG+TA+V+RLRK+LAE TE T
Sbjct: 467 GKCKVTPELKEILARMDARIRSLHNALPTNTMLIVCTGHGNTAMVYRLRKMLAESTETTT 526
Query: 535 ALSRDKLVKVLEELQAQAEVGLCFVGVKH 621
++SR +VKVLEELQAQAEV LCFVGVKH
Sbjct: 527 SMSRPNIVKVLEELQAQAEVALCFVGVKH 555
>ref|XP_006356308.1| PREDICTED: small RNA degrading nuclease 5-like isoform X1 [Solanum
tuberosum]
Length = 571
Score = 286 bits (732), Expect = 9e-75
Identities = 140/209 (66%), Positives = 179/209 (85%), Gaps = 2/209 (0%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPS--FLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSD 174
ALLKI++GPDFG PPS LR+KLL+VL + GK SSIID ISI +RYA++LS++IPVSSD
Sbjct: 363 ALLKIKNGPDFGIPPSQQLLRRKLLSVLSDSGKGSSIIDNISIARRYAAELSHTIPVSSD 422
Query: 175 DDALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGR 354
D+ALSKA KEVRNDKV FIWTQF+EL Y ++ ADD E+ N+KLAEMIA++TC ++ N R
Sbjct: 423 DEALSKAIKEVRNDKVQFIWTQFAELYAYLRKQADDSEELNKKLAEMIALMTCEKQSNSR 482
Query: 355 KSIRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTET 534
KSI+++VTPELKDIL M+ R+R ++S+LP+N M IICTGHG+TAIV R+RK+L+EQT+
Sbjct: 483 KSIKFDVTPELKDILGCMNRRVRSIYSNLPLNAMLIICTGHGNTAIVQRVRKILSEQTDA 542
Query: 535 ALSRDKLVKVLEELQAQAEVGLCFVGVKH 621
++ R+ +VK+LEELQAQAEVGLCFVGVKH
Sbjct: 543 SMPRENIVKLLEELQAQAEVGLCFVGVKH 571
>gb|EMJ00190.1| hypothetical protein PRUPE_ppa003497mg [Prunus persica]
Length = 569
Score = 286 bits (731), Expect = 1e-74
Identities = 138/206 (66%), Positives = 172/206 (83%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDD 180
ALLKIRHGPDFG+ PS +RK+LLTVL E GK SSIID++SIVKRYAS+LS+++PVSSDD+
Sbjct: 363 ALLKIRHGPDFGTRPSLIRKRLLTVLSESGKTSSIIDDVSIVKRYASELSHAVPVSSDDE 422
Query: 181 ALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKS 360
A SKA+KE RND+VHF+WTQFSELN YFK+ A+D EK N KLAEMI++LTC + +K
Sbjct: 423 ASSKAQKEARNDRVHFVWTQFSELNAYFKKQAEDPEKLNGKLAEMISLLTCDKNSGNKKG 482
Query: 361 IRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETAL 540
I+ N+ ELK+IL R+D RIR L+++LP N M I+CTGHGD A V+RLRKLL +++ET +
Sbjct: 483 IKCNLASELKEILKRVDTRIRTLYAALPTNAMIIVCTGHGDLATVYRLRKLLLDRSETTM 542
Query: 541 SRDKLVKVLEELQAQAEVGLCFVGVK 618
R+ +VKVLEELQAQAEV LCFVGVK
Sbjct: 543 CRESIVKVLEELQAQAEVALCFVGVK 568
>ref|XP_004237720.1| PREDICTED: small RNA degrading nuclease 5-like [Solanum
lycopersicum]
Length = 571
Score = 285 bits (730), Expect = 2e-74
Identities = 139/209 (66%), Positives = 179/209 (85%), Gaps = 2/209 (0%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPS--FLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSD 174
ALLKI++GPDFG P S LR+KLL+VL + GK SSIID ISI +RYA++LS++IPVSSD
Sbjct: 363 ALLKIKNGPDFGIPQSQQLLRRKLLSVLSDSGKGSSIIDNISIARRYAAELSHTIPVSSD 422
Query: 175 DDALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGR 354
D+ALSKA KEVRNDKV FIWTQF+EL Y ++ ADD E+ N+KLAEMIA+LTC ++ N R
Sbjct: 423 DEALSKAIKEVRNDKVQFIWTQFAELYAYLRKQADDSEELNKKLAEMIALLTCEKQSNSR 482
Query: 355 KSIRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTET 534
KSI++++TPELKDIL RM+ R++ ++S+LP+N M IICTGHG+TAIV R+RK+L+EQT+
Sbjct: 483 KSIKFDITPELKDILGRMNRRVKSIYSNLPLNAMLIICTGHGNTAIVQRVRKILSEQTDA 542
Query: 535 ALSRDKLVKVLEELQAQAEVGLCFVGVKH 621
++ R+ +VK+LEELQAQAEVGLCFVGVKH
Sbjct: 543 SMPRENIVKLLEELQAQAEVGLCFVGVKH 571
>ref|XP_006472902.1| PREDICTED: small RNA degrading nuclease 5-like [Citrus sinensis]
Length = 634
Score = 284 bits (726), Expect = 4e-74
Identities = 136/207 (65%), Positives = 173/207 (83%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDD 180
ALLKIR+GPDFGSPPS +R KLL VL EYGK S++ID +SI+KRYAS+ S++IPVSSDD+
Sbjct: 428 ALLKIRNGPDFGSPPSVMRTKLLKVLFEYGKTSTLIDNVSIIKRYASESSHAIPVSSDDE 487
Query: 181 ALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKS 360
ALSKARKEV+ND++HF+WTQFSELN +FK+ A D + N KLAE+I++ TC +K + K
Sbjct: 488 ALSKARKEVKNDRIHFVWTQFSELNLHFKKQAKDEAELNEKLAELISLATCDKKLSDSKR 547
Query: 361 IRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETAL 540
+ VTPE+K+IL+R D R+ L+++LP NTM IICTGHGDTAIVHRLR++L EQ++ ++
Sbjct: 548 FKSFVTPEIKEILARTDARVNSLYTALPTNTMLIICTGHGDTAIVHRLREMLREQSKNSM 607
Query: 541 SRDKLVKVLEELQAQAEVGLCFVGVKH 621
SR +VKVLEELQAQAEV LCFVGVKH
Sbjct: 608 SRKMIVKVLEELQAQAEVALCFVGVKH 634
>ref|XP_006434348.1| hypothetical protein CICLE_v10000720mg [Citrus clementina]
gi|557536470|gb|ESR47588.1| hypothetical protein
CICLE_v10000720mg [Citrus clementina]
Length = 569
Score = 284 bits (726), Expect = 4e-74
Identities = 136/207 (65%), Positives = 172/207 (83%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDD 180
ALLKIR+GPDFGSPPS +R KLL VL EYGK S++ID +SI+KRYAS+ S++IPVSSDD+
Sbjct: 363 ALLKIRNGPDFGSPPSVMRTKLLKVLFEYGKTSTLIDNVSIIKRYASESSHAIPVSSDDE 422
Query: 181 ALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKS 360
LSKARKEV+ND++HF+WTQFSELN +FK+ A D K N KLAE+I++ TC +K + K
Sbjct: 423 VLSKARKEVKNDRIHFVWTQFSELNLHFKKQAKDEAKLNEKLAELISLATCDKKLSDSKR 482
Query: 361 IRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETAL 540
+ VTPE+K+IL+R D R+ L+++LP NTM IICTGHGDTAIVHRLR++L EQ++ ++
Sbjct: 483 FKSFVTPEIKEILARTDARVNSLYTALPTNTMLIICTGHGDTAIVHRLREMLREQSKNSM 542
Query: 541 SRDKLVKVLEELQAQAEVGLCFVGVKH 621
SR +VKVLEELQAQAEV LCFVGVKH
Sbjct: 543 SRKMIVKVLEELQAQAEVALCFVGVKH 569
>ref|XP_006593769.1| PREDICTED: small RNA degrading nuclease 5-like isoform X1 [Glycine
max]
Length = 583
Score = 275 bits (704), Expect = 2e-71
Identities = 135/207 (65%), Positives = 168/207 (81%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDD 180
ALLKIR+GPDFGSPPSF RKKLL++L E GK SS+ID+IS+VKRYAS+ S++IPV+SDD
Sbjct: 377 ALLKIRNGPDFGSPPSFTRKKLLSILSESGKISSLIDDISVVKRYASESSHAIPVTSDDV 436
Query: 181 ALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKS 360
AL+KA KEV+N+KVHFIWTQFSEL+ Y K+ A+D E N++LAEMIA+ TC K
Sbjct: 437 ALAKANKEVKNEKVHFIWTQFSELHSYLKKQAEDSESLNKRLAEMIAIKTCQNNFAKGKG 496
Query: 361 IRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETAL 540
+ N + ELK+IL+RMD RI L+ SLP N M IICTGHGDTAIV RLRK+L EQ E+ L
Sbjct: 497 FKLNASAELKEILARMDARIHNLYLSLPTNAMMIICTGHGDTAIVRRLRKMLTEQNESNL 556
Query: 541 SRDKLVKVLEELQAQAEVGLCFVGVKH 621
R+++V++LEE+QA+AEV LCFVGVKH
Sbjct: 557 CREEIVEILEEVQARAEVALCFVGVKH 583
>emb|CAN72872.1| hypothetical protein VITISV_030007 [Vitis vinifera]
Length = 1020
Score = 275 bits (704), Expect = 2e-71
Identities = 134/190 (70%), Positives = 162/190 (85%)
Frame = +1
Query: 22 GPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDDALSKARK 201
GP+FGSPPSF+RKKLLTVL +YGK SS ID+ISIV+RY S+ S++ PVSSD +ALSKA+K
Sbjct: 769 GPEFGSPPSFMRKKLLTVLNDYGKTSSFIDDISIVRRYTSEASHAFPVSSDVEALSKAKK 828
Query: 202 EVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKSIRYNVTP 381
EV+NDKVHF+WTQFSELN YFK+ A+D +K N KLAEMI++LTC++K K I+++VT
Sbjct: 829 EVKNDKVHFVWTQFSELNSYFKKQAEDTDKLNAKLAEMISLLTCNKKSTTPKGIKFSVTS 888
Query: 382 ELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETALSRDKLVK 561
ELKDIL+ +D RIR L+ LP NTM IICTGHGDTAIVHRLRK+L EQ ET +SR+KLVK
Sbjct: 889 ELKDILTCIDTRIRSLYHELPANTMLIICTGHGDTAIVHRLRKMLREQIETTVSREKLVK 948
Query: 562 VLEELQAQAE 591
VLEELQAQAE
Sbjct: 949 VLEELQAQAE 958
>ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max]
Length = 567
Score = 275 bits (703), Expect = 2e-71
Identities = 134/207 (64%), Positives = 168/207 (81%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDD 180
ALLKIR+GP+FGSPPSF RKKLL++L E GK SS+ID+IS+VKRYAS+ S++IPV+SDD
Sbjct: 361 ALLKIRNGPNFGSPPSFTRKKLLSILSESGKTSSLIDDISVVKRYASESSHAIPVTSDDV 420
Query: 181 ALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKS 360
AL+KA KEV+N KVHFIWTQFSEL+ Y K+ A+D E+ NR+LAEM+A+ TC K
Sbjct: 421 ALAKANKEVKNGKVHFIWTQFSELHSYLKKQAEDSERLNRRLAEMLALQTCQNNFTKGKD 480
Query: 361 IRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETAL 540
+ + ELK+IL+RMD RI L+ SLP N M IICTGHGDTAIV RLRK+LAEQ E+ +
Sbjct: 481 FKLKASAELKEILARMDARIHNLYLSLPTNAMMIICTGHGDTAIVRRLRKMLAEQNESNI 540
Query: 541 SRDKLVKVLEELQAQAEVGLCFVGVKH 621
R+K+V++LEE+QA+AEV LCFVGVKH
Sbjct: 541 CREKIVEILEEVQARAEVALCFVGVKH 567
>ref|XP_002300948.1| exonuclease family protein [Populus trichocarpa]
gi|222842674|gb|EEE80221.1| exonuclease family protein
[Populus trichocarpa]
Length = 299
Score = 273 bits (697), Expect = 1e-70
Identities = 137/208 (65%), Positives = 169/208 (81%)
Frame = +1
Query: 4 LLKIRHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDDA 183
LL + GPDFGSPPSF+ +KLLTVL E GK SS+ID+ISIV YAS S+S PVSS ++A
Sbjct: 89 LLTLLLGPDFGSPPSFVSRKLLTVLSECGKTSSLIDDISIVNLYASGSSHSFPVSSGEEA 148
Query: 184 LSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKSI 363
L K RKEV ND+VHF+WTQFSELN YFK+ A+D K N KLAEMI++LTC +K RK++
Sbjct: 149 LLKVRKEVMNDRVHFVWTQFSELNSYFKKQAEDEGKLNGKLAEMISLLTCEKKSANRKAM 208
Query: 364 RYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETALS 543
+ ++T ELK+I ++MD +R L+S+LP NTM IICTGHGDTAIVHRLRK+L EQ ETA+S
Sbjct: 209 KCSLTSELKEIPTQMDAWVRCLYSTLPTNTMLIICTGHGDTAIVHRLRKILVEQKETAIS 268
Query: 544 RDKLVKVLEELQAQAEVGLCFVGVKH*G 627
+K+V+VLEELQAQAEV LCFVGVK+ G
Sbjct: 269 LEKIVQVLEELQAQAEVALCFVGVKNRG 296
>ref|NP_197952.2| polynucleotidyl transferase, ribonuclease H-like superfamily
protein [Arabidopsis thaliana]
gi|215274964|sp|Q8L7M4.2|SDN5_ARATH RecName: Full=Small
RNA degrading nuclease 5 gi|332006106|gb|AED93489.1|
polynucleotidyl transferase, ribonuclease H-like
superfamily protein [Arabidopsis thaliana]
Length = 567
Score = 272 bits (696), Expect = 1e-70
Identities = 133/206 (64%), Positives = 169/206 (82%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDD 180
ALLKI+HGPDFGSPP +RKKLL VL E GK +SIID I+IVKRYAS+ SN+IPVSSDD+
Sbjct: 364 ALLKIKHGPDFGSPPEVIRKKLLAVLNESGKTTSIIDNINIVKRYASESSNAIPVSSDDE 423
Query: 181 ALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKS 360
ALSKA KEV+N + F+WTQFSELN +F+ ADD +K N +LAEMI++LTC++K +KS
Sbjct: 424 ALSKAVKEVKNKRSQFVWTQFSELNAHFQSRADDPQKLNSRLAEMISLLTCNKKSGLKKS 483
Query: 361 IRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETAL 540
NV+PE K+IL +M+ R++ L+++LP N MFI+CTGHGDT+IVHR+RK+L ++ E
Sbjct: 484 ---NVSPETKEILKKMNERVQSLYAALPTNAMFIVCTGHGDTSIVHRVRKMLKDEDEIGF 540
Query: 541 SRDKLVKVLEELQAQAEVGLCFVGVK 618
R+KLVKVLEELQAQAEV LCFVG+K
Sbjct: 541 DREKLVKVLEELQAQAEVALCFVGIK 566
>ref|XP_004146782.1| PREDICTED: small RNA degrading nuclease 5-like [Cucumis sativus]
Length = 572
Score = 271 bits (693), Expect = 3e-70
Identities = 130/207 (62%), Positives = 164/207 (79%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDD 180
ALLKI+HGPDFGSPPS +RKKLL +LGE GK SS ID+I+ VKRY S+ S++ PV+SDD+
Sbjct: 366 ALLKIKHGPDFGSPPSLIRKKLLNILGESGKTSSFIDDIATVKRYCSESSHAFPVTSDDE 425
Query: 181 ALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKS 360
ALS+A+KE N+KVHFIWTQFSELN Y K+ DD EK N KLAE++++LTC K +K
Sbjct: 426 ALSRAKKEAMNEKVHFIWTQFSELNSYHKKQVDDEEKLNVKLAELLSLLTCDTKSVNKKR 485
Query: 361 IRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETAL 540
R ++ EL++IL+RMD RI L++SLP N M IICTGHGD +V RLRK+L EQ+ET++
Sbjct: 486 NRAKISVELQEILARMDSRINDLYTSLPTNAMLIICTGHGDITLVQRLRKMLQEQSETSI 545
Query: 541 SRDKLVKVLEELQAQAEVGLCFVGVKH 621
R+K+VK+LEEL AQAEV LCFV KH
Sbjct: 546 CREKIVKILEELHAQAEVALCFVCTKH 572
>gb|ESW33378.1| hypothetical protein PHAVU_001G064400g [Phaseolus vulgaris]
Length = 569
Score = 268 bits (685), Expect = 3e-69
Identities = 130/207 (62%), Positives = 162/207 (78%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDD 180
ALLKIR+GPDFGSPPSF +KK L++L E GK SS+ID+ISIVKRYAS+ SN+IPV SDD+
Sbjct: 363 ALLKIRNGPDFGSPPSFTKKKFLSILSESGKTSSLIDDISIVKRYASESSNAIPVISDDE 422
Query: 181 ALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKS 360
AL+K +KEV+NDKVHFIWTQFSEL+ Y K+ A+D + N +LAEM+A+ TC + + +K
Sbjct: 423 ALAKTKKEVKNDKVHFIWTQFSELHSYLKKKAEDSDSLNERLAEMMALQTCQKNSDQQKG 482
Query: 361 IRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETAL 540
+ ELK+IL RMD R+ L+ SLP N M II TGHGDTAIV RLR++LAEQTE
Sbjct: 483 FKLKAPAELKEILVRMDARVHNLYLSLPTNAMMIIFTGHGDTAIVRRLRRMLAEQTEPNF 542
Query: 541 SRDKLVKVLEELQAQAEVGLCFVGVKH 621
R+K+V +L E QAQAEV LCFVG+KH
Sbjct: 543 CREKIVDILAEFQAQAEVALCFVGIKH 569
>ref|XP_002307475.1| exonuclease family protein [Populus trichocarpa]
gi|222856924|gb|EEE94471.1| exonuclease family protein
[Populus trichocarpa]
Length = 545
Score = 267 bits (682), Expect = 6e-69
Identities = 137/207 (66%), Positives = 167/207 (80%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDD 180
ALLKIR+G KKLLTVL E GK SS ID+ISIVKRY S S+S PVSSD++
Sbjct: 350 ALLKIRNG-----------KKLLTVLSECGKTSSFIDDISIVKRYTSGSSHSFPVSSDEE 398
Query: 181 ALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKS 360
AL KARKEV+ND VHF+WTQFSELN YFK+ A+D K N KLAEMI++LTC +K K
Sbjct: 399 ALLKARKEVKNDGVHFVWTQFSELNSYFKKQAEDEGKLNGKLAEMISLLTCEKKSTNTKG 458
Query: 361 IRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETAL 540
++ ++TP+LK+IL++MD R+R L+S+LP NTM IICTGHGDTAIV+R+RK+LAEQ ETA+
Sbjct: 459 MKCSMTPQLKEILTQMDARVRCLYSTLPTNTMLIICTGHGDTAIVNRVRKMLAEQKETAI 518
Query: 541 SRDKLVKVLEELQAQAEVGLCFVGVKH 621
SR+K+VKVLEELQAQAEV LCFVGVK+
Sbjct: 519 SREKIVKVLEELQAQAEVALCFVGVKN 545
>ref|XP_006394828.1| hypothetical protein EUTSA_v10003904mg [Eutrema salsugineum]
gi|557091467|gb|ESQ32114.1| hypothetical protein
EUTSA_v10003904mg [Eutrema salsugineum]
Length = 575
Score = 266 bits (679), Expect = 1e-68
Identities = 128/206 (62%), Positives = 165/206 (80%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDD 180
ALLKI++GPDFGSPP + KKLL +L E GK +SI+D I+IVKRYAS+ SNSIPVSSDD+
Sbjct: 369 ALLKIKYGPDFGSPPEMITKKLLAILNESGKTTSIVDNINIVKRYASESSNSIPVSSDDE 428
Query: 181 ALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKS 360
ALSKA KEV+N + F+WTQFSELN +F+ ADD +K N +LAEMI++LTCS+ +K
Sbjct: 429 ALSKAMKEVKNKRSQFVWTQFSELNKHFQSRADDPQKLNSRLAEMISLLTCSKDSGLKKR 488
Query: 361 IRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETAL 540
+ V+ E K+IL +MD R+ L+++LP N MFI+CTGHGDT+IVHR+RK+L ++ E
Sbjct: 489 RKSKVSLETKEILKKMDDRVHTLYAALPTNAMFIVCTGHGDTSIVHRVRKMLRDEKEIEF 548
Query: 541 SRDKLVKVLEELQAQAEVGLCFVGVK 618
SR+K+VKVLEELQAQAEV LCFVG+K
Sbjct: 549 SREKVVKVLEELQAQAEVALCFVGIK 574
>ref|XP_004498375.1| PREDICTED: small RNA degrading nuclease 5-like isoform X2 [Cicer
arietinum]
Length = 571
Score = 264 bits (674), Expect = 5e-68
Identities = 123/207 (59%), Positives = 168/207 (81%)
Frame = +1
Query: 1 ALLKIRHGPDFGSPPSFLRKKLLTVLGEYGKASSIIDEISIVKRYASDLSNSIPVSSDDD 180
A+LKIR+GP FG+PPSF+R+KLL++L EYGK SS+ID+ISIV+R+AS+ SNSIPV+SD++
Sbjct: 365 AVLKIRNGPGFGAPPSFMREKLLSILSEYGKTSSMIDDISIVRRFASETSNSIPVTSDEE 424
Query: 181 ALSKARKEVRNDKVHFIWTQFSELNHYFKRHADDLEKFNRKLAEMIAMLTCSEKPNGRKS 360
AL+K KE++N+KVHFIWTQFSEL+ Y + A+D + N+K+AEMIA+ TC + + K
Sbjct: 425 ALAKTIKELKNEKVHFIWTQFSELHSYLNKQAEDSDSLNKKIAEMIALHTCQKNHSKGKG 484
Query: 361 IRYNVTPELKDILSRMDGRIRGLHSSLPVNTMFIICTGHGDTAIVHRLRKLLAEQTETAL 540
+ N + ELK++++RMD RI L+ SLP N M I+CTGHGDTA+V RLRK+L E++ +
Sbjct: 485 PKSNTSAELKEVVARMDNRIHKLYKSLPTNAMMIVCTGHGDTAVVRRLRKMLKEESGSNF 544
Query: 541 SRDKLVKVLEELQAQAEVGLCFVGVKH 621
RDK+V+VLE+ QA+AEV LCFVGVKH
Sbjct: 545 GRDKIVEVLEDFQARAEVALCFVGVKH 571