BLASTX nr result
ID: Rauwolfia21_contig00013730
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00013730
(537 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002316148.2| hypothetical protein POPTR_0010s17940g [Popu... 60 4e-07
ref|XP_004249090.1| PREDICTED: pre-mRNA-splicing factor ATP-depe... 59 7e-07
ref|XP_006364743.1| PREDICTED: pre-mRNA-splicing factor ATP-depe... 58 1e-06
ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinu... 58 2e-06
gb|EMJ28270.1| hypothetical protein PRUPE_ppa000450mg [Prunus pe... 57 4e-06
ref|XP_006484072.1| PREDICTED: pre-mRNA-splicing factor ATP-depe... 56 5e-06
ref|XP_006438066.1| hypothetical protein CICLE_v100305312mg, par... 56 5e-06
gb|EOY13968.1| RNA helicase family protein isoform 3 [Theobroma ... 56 6e-06
gb|EOY13966.1| Pre-mRNA-splicing factor ATP-dependent RNA helica... 56 6e-06
ref|XP_004487236.1| PREDICTED: pre-mRNA-splicing factor ATP-depe... 55 8e-06
>ref|XP_002316148.2| hypothetical protein POPTR_0010s17940g [Populus trichocarpa]
gi|550330040|gb|EEF02319.2| hypothetical protein
POPTR_0010s17940g [Populus trichocarpa]
Length = 1284
Score = 59.7 bits (143), Expect = 4e-07
Identities = 33/69 (47%), Positives = 38/69 (55%)
Frame = +1
Query: 1 SDTSLLEHKRKQXXXXXXXXXXXXRLRQVQSXXXXXXXXXXXXXXXXXQQQVSTPGLKQG 180
SDTS+LEHKRKQ LR+VQ+ QQQVS PGLK+G
Sbjct: 1213 SDTSMLEHKRKQKEEKTAMEEEMENLRKVQAETDRESKEKEREKRAKRQQQVSMPGLKKG 1272
Query: 181 STTYLRPKK 207
S+TYLRPKK
Sbjct: 1273 SSTYLRPKK 1281
>ref|XP_004249090.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16-like [Solanum lycopersicum]
Length = 1285
Score = 58.9 bits (141), Expect = 7e-07
Identities = 35/73 (47%), Positives = 41/73 (56%)
Frame = +1
Query: 1 SDTSLLEHKRKQXXXXXXXXXXXXRLRQVQSXXXXXXXXXXXXXXXXXQQQVSTPGLKQG 180
SDTS+LEHK+KQ +LR+VQ+ QQVS PGLK+G
Sbjct: 1214 SDTSMLEHKKKQKEEKTAMEEEMEKLRKVQAEADRRNKEKEKEKRAKELQQVSMPGLKKG 1273
Query: 181 STTYLRPKKRLGL 219
STTYLRP KRLGL
Sbjct: 1274 STTYLRP-KRLGL 1285
>ref|XP_006364743.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16-like [Solanum tuberosum]
Length = 1285
Score = 58.2 bits (139), Expect = 1e-06
Identities = 35/73 (47%), Positives = 40/73 (54%)
Frame = +1
Query: 1 SDTSLLEHKRKQXXXXXXXXXXXXRLRQVQSXXXXXXXXXXXXXXXXXQQQVSTPGLKQG 180
SDTS+LEHK+KQ +LR VQ+ QQVS PGLK+G
Sbjct: 1214 SDTSMLEHKKKQKEEKTAMEEEMEKLRTVQAEAERRNKEKEKEKRAKELQQVSMPGLKKG 1273
Query: 181 STTYLRPKKRLGL 219
STTYLRP KRLGL
Sbjct: 1274 STTYLRP-KRLGL 1285
>ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223533556|gb|EEF35296.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 1269
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/69 (44%), Positives = 38/69 (55%)
Frame = +1
Query: 1 SDTSLLEHKRKQXXXXXXXXXXXXRLRQVQSXXXXXXXXXXXXXXXXXQQQVSTPGLKQG 180
SDTS+LEHK++Q LR+ Q+ QQQVSTPGL+QG
Sbjct: 1198 SDTSMLEHKKRQKEEKTAMEEEMENLRKEQAEAERESKEREKQKRAKQQQQVSTPGLRQG 1257
Query: 181 STTYLRPKK 207
S+TYLRPKK
Sbjct: 1258 SSTYLRPKK 1266
>gb|EMJ28270.1| hypothetical protein PRUPE_ppa000450mg [Prunus persica]
Length = 1168
Score = 56.6 bits (135), Expect = 4e-06
Identities = 33/73 (45%), Positives = 40/73 (54%)
Frame = +1
Query: 1 SDTSLLEHKRKQXXXXXXXXXXXXRLRQVQSXXXXXXXXXXXXXXXXXQQQVSTPGLKQG 180
SDTS+LEHK++Q LR+ Q+ QQQVSTPGL +G
Sbjct: 1097 SDTSMLEHKKRQKEEKTAMEEEMENLRKTQAEEEKENKRKEKEKRSKQQQQVSTPGLHKG 1156
Query: 181 STTYLRPKKRLGL 219
S+TYLRPKK LGL
Sbjct: 1157 SSTYLRPKK-LGL 1168
>ref|XP_006484072.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16-like [Citrus sinensis]
Length = 1284
Score = 56.2 bits (134), Expect = 5e-06
Identities = 30/69 (43%), Positives = 37/69 (53%)
Frame = +1
Query: 1 SDTSLLEHKRKQXXXXXXXXXXXXRLRQVQSXXXXXXXXXXXXXXXXXQQQVSTPGLKQG 180
SDTS+LEHK+KQ LR++Q+ +QQVS PG +QG
Sbjct: 1213 SDTSMLEHKKKQKESKTAMEEEMENLRKIQADEERENKAKEREKRVKERQQVSMPGWRQG 1272
Query: 181 STTYLRPKK 207
STTYLRPKK
Sbjct: 1273 STTYLRPKK 1281
>ref|XP_006438066.1| hypothetical protein CICLE_v100305312mg, partial [Citrus clementina]
gi|557540262|gb|ESR51306.1| hypothetical protein
CICLE_v100305312mg, partial [Citrus clementina]
Length = 882
Score = 56.2 bits (134), Expect = 5e-06
Identities = 30/69 (43%), Positives = 37/69 (53%)
Frame = +1
Query: 1 SDTSLLEHKRKQXXXXXXXXXXXXRLRQVQSXXXXXXXXXXXXXXXXXQQQVSTPGLKQG 180
SDTS+LEHK+KQ LR++Q+ +QQVS PG +QG
Sbjct: 811 SDTSMLEHKKKQKESKTAMEEEMENLRKIQADEERENKAKEREKRVKERQQVSMPGWRQG 870
Query: 181 STTYLRPKK 207
STTYLRPKK
Sbjct: 871 STTYLRPKK 879
>gb|EOY13968.1| RNA helicase family protein isoform 3 [Theobroma cacao]
Length = 1025
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/69 (43%), Positives = 37/69 (53%)
Frame = +1
Query: 1 SDTSLLEHKRKQXXXXXXXXXXXXRLRQVQSXXXXXXXXXXXXXXXXXQQQVSTPGLKQG 180
SDT+LLEHK++Q LR+ Q+ QQQVS PGL+QG
Sbjct: 954 SDTTLLEHKKRQKEEKTAMEEEMENLRKAQAEAERESKEKERQKRAKQQQQVSMPGLRQG 1013
Query: 181 STTYLRPKK 207
S+TYLRPKK
Sbjct: 1014 SSTYLRPKK 1022
>gb|EOY13966.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform 1
[Theobroma cacao] gi|508722070|gb|EOY13967.1|
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
isoform 1 [Theobroma cacao]
Length = 1279
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/69 (43%), Positives = 37/69 (53%)
Frame = +1
Query: 1 SDTSLLEHKRKQXXXXXXXXXXXXRLRQVQSXXXXXXXXXXXXXXXXXQQQVSTPGLKQG 180
SDT+LLEHK++Q LR+ Q+ QQQVS PGL+QG
Sbjct: 1208 SDTTLLEHKKRQKEEKTAMEEEMENLRKAQAEAERESKEKERQKRAKQQQQVSMPGLRQG 1267
Query: 181 STTYLRPKK 207
S+TYLRPKK
Sbjct: 1268 SSTYLRPKK 1276
>ref|XP_004487236.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16-like [Cicer arietinum]
Length = 1254
Score = 55.5 bits (132), Expect = 8e-06
Identities = 32/73 (43%), Positives = 39/73 (53%)
Frame = +1
Query: 1 SDTSLLEHKRKQXXXXXXXXXXXXRLRQVQSXXXXXXXXXXXXXXXXXQQQVSTPGLKQG 180
SDTSLLEHK+KQ L++ Q+ QQQ+S PGLK+G
Sbjct: 1183 SDTSLLEHKKKQKQEKTAMEEEMENLKKTQAEFERENKQREKEKMAKNQQQISMPGLKKG 1242
Query: 181 STTYLRPKKRLGL 219
STT+LRP KR GL
Sbjct: 1243 STTFLRP-KRFGL 1254