BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00012398
         (254 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III s...    71   1e-10
ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III s...    69   6e-10
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s...    66   5e-09
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s...    61   2e-07

>ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Solanum lycopersicum]
          Length = 193

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 38/84 (45%), Positives = 44/84 (52%)
 Frame = -3

Query: 252 SLGFFDDIYVPVPLLPNPSHSEPDQENK*VACFA*LISSGSIESIQQANLVTCFASVPMC 73
           SLGFFDDIYVP PLLP+PS SEPD ENK                                
Sbjct: 100 SLGFFDDIYVPAPLLPDPSRSEPDPENK-------------------------------- 127

Query: 72  INRNQVRWIWEYNGDNYPIDGMDE 1
              NQVRWIW+++  +YPIDG+DE
Sbjct: 128 ---NQVRWIWKFDELDYPIDGIDE 148


>ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Solanum tuberosum]
          Length = 193

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 37/84 (44%), Positives = 43/84 (51%)
 Frame = -3

Query: 252 SLGFFDDIYVPVPLLPNPSHSEPDQENK*VACFA*LISSGSIESIQQANLVTCFASVPMC 73
           SLGFFDDIYVP PLLP+PS S PD ENK                                
Sbjct: 100 SLGFFDDIYVPAPLLPDPSRSAPDPENK-------------------------------- 127

Query: 72  INRNQVRWIWEYNGDNYPIDGMDE 1
              NQVRWIW+++  +YPIDG+DE
Sbjct: 128 ---NQVRWIWKFDELDYPIDGVDE 148


>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
           vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 34/84 (40%), Positives = 40/84 (47%)
 Frame = -3

Query: 252 SLGFFDDIYVPVPLLPNPSHSEPDQENK*VACFA*LISSGSIESIQQANLVTCFASVPMC 73
           SLGFFDDIY+PV L+PNP H EPD ENK                                
Sbjct: 100 SLGFFDDIYIPVHLMPNPCHCEPDPENK-------------------------------- 127

Query: 72  INRNQVRWIWEYNGDNYPIDGMDE 1
              +QV WIW+Y    +PIDG+DE
Sbjct: 128 ---SQVIWIWDYQEQKFPIDGLDE 148


>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/84 (38%), Positives = 38/84 (45%)
 Frame = -3

Query: 252 SLGFFDDIYVPVPLLPNPSHSEPDQENK*VACFA*LISSGSIESIQQANLVTCFASVPMC 73
           SLGFFDDIY+PV L+PNP H EP+ E K                                
Sbjct: 100 SLGFFDDIYIPVHLMPNPCHCEPNPEKK-------------------------------- 127

Query: 72  INRNQVRWIWEYNGDNYPIDGMDE 1
               QV WIW+Y    +PIDG+DE
Sbjct: 128 ---GQVIWIWDYQEQKFPIDGIDE 148