BLASTX nr result
ID: Rauwolfia21_contig00012297
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00012297
(1181 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabi... 143 1e-31
ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis th... 140 8e-31
ref|XP_006417530.1| hypothetical protein EUTSA_v10009118mg [Eutr... 140 1e-30
gb|AAM65969.1| unknown [Arabidopsis thaliana] 139 2e-30
ref|XP_004247827.1| PREDICTED: DNA polymerase delta subunit 4-li... 137 7e-30
ref|XP_006360330.1| PREDICTED: uncharacterized protein LOC102606... 136 1e-29
ref|XP_006304299.1| hypothetical protein CARUB_v10010654mg [Caps... 136 2e-29
ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus comm... 135 3e-29
ref|XP_006484706.1| PREDICTED: uncharacterized protein LOC102608... 135 4e-29
ref|XP_006437397.1| hypothetical protein CICLE_v10033086mg [Citr... 135 4e-29
gb|EMJ19797.1| hypothetical protein PRUPE_ppa013345mg [Prunus pe... 132 2e-28
ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209... 129 2e-27
gb|EOY10256.1| Polymerase delta 4 [Theobroma cacao] 127 9e-27
ref|XP_002325451.1| DNA polymerase delta subunit 4 family protei... 125 3e-26
ref|XP_006349440.1| PREDICTED: DNA polymerase delta subunit 4-li... 125 4e-26
ref|XP_002319772.1| DNA polymerase delta subunit 4 family protei... 123 2e-25
gb|ABK93288.1| unknown [Populus trichocarpa] 123 2e-25
ref|XP_004288555.1| PREDICTED: DNA polymerase delta subunit 4-li... 120 1e-24
gb|EOY10253.1| Polymerase delta 4, putative [Theobroma cacao] 119 3e-24
ref|XP_002265281.1| PREDICTED: uncharacterized protein LOC100263... 116 2e-23
>ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp.
lyrata] gi|297335614|gb|EFH66031.1| DNA polymerase delta
subunit 4 family [Arabidopsis lyrata subsp. lyrata]
Length = 122
Score = 143 bits (361), Expect = 1e-31
Identities = 64/91 (70%), Positives = 78/91 (85%)
Frame = +2
Query: 392 TPKHSASYGSDNAQPAALVSHGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWER 571
TPKH+A+ GSD QPAAL+SHGS DL +DYD+ E MLRQFDMN+AYGPC+GM+RLDRWER
Sbjct: 32 TPKHAAAQGSDVIQPAALISHGSLDLNEDYDKEEEMLRQFDMNIAYGPCLGMTRLDRWER 91
Query: 572 AKLMGLNPPEEIEKLLKSGQVKYENLWNGRV 664
A +G+NPP EIEKLLK+G+V+ + LW GRV
Sbjct: 92 ALRLGMNPPNEIEKLLKTGKVQQDCLWQGRV 122
>ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis thaliana]
gi|98961061|gb|ABF59014.1| At1g09815 [Arabidopsis
thaliana] gi|332190377|gb|AEE28498.1| DNA polymerase
delta subunit 4 [Arabidopsis thaliana]
Length = 124
Score = 140 bits (354), Expect = 8e-31
Identities = 62/90 (68%), Positives = 76/90 (84%)
Frame = +2
Query: 395 PKHSASYGSDNAQPAALVSHGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWERA 574
PKH+A+ GSD QPAAL+SHGS DL +DYD+ E MLRQFDMN+ YGPC+GM+RLDRWERA
Sbjct: 35 PKHAAAQGSDVTQPAALISHGSVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERA 94
Query: 575 KLMGLNPPEEIEKLLKSGQVKYENLWNGRV 664
+G+NPP EIEKLLK+G+V+ + LW GRV
Sbjct: 95 VRLGMNPPNEIEKLLKTGKVQQDCLWQGRV 124
>ref|XP_006417530.1| hypothetical protein EUTSA_v10009118mg [Eutrema salsugineum]
gi|557095301|gb|ESQ35883.1| hypothetical protein
EUTSA_v10009118mg [Eutrema salsugineum]
Length = 124
Score = 140 bits (352), Expect = 1e-30
Identities = 63/91 (69%), Positives = 76/91 (83%)
Frame = +2
Query: 392 TPKHSASYGSDNAQPAALVSHGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWER 571
TPKH+A+ GSD QPAAL+SHGS DL D YD+ E MLRQFDMNMAYGPC+GM+RLDRWER
Sbjct: 34 TPKHAATQGSDATQPAALISHGSLDLNDAYDKEEEMLRQFDMNMAYGPCLGMTRLDRWER 93
Query: 572 AKLMGLNPPEEIEKLLKSGQVKYENLWNGRV 664
A +G+NPP EIE+LLK+ +V+ + LW GRV
Sbjct: 94 ALRLGMNPPSEIERLLKTEKVQQDCLWQGRV 124
>gb|AAM65969.1| unknown [Arabidopsis thaliana]
Length = 124
Score = 139 bits (351), Expect = 2e-30
Identities = 61/90 (67%), Positives = 76/90 (84%)
Frame = +2
Query: 395 PKHSASYGSDNAQPAALVSHGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWERA 574
PKH+A+ GSD QPAAL+SHGS DL +DYD+ E MLRQFDMN+ YGPC+GM+RLDRW+RA
Sbjct: 35 PKHAAAQGSDVTQPAALISHGSVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWQRA 94
Query: 575 KLMGLNPPEEIEKLLKSGQVKYENLWNGRV 664
+G+NPP EIEKLLK+G+V+ + LW GRV
Sbjct: 95 VRLGMNPPNEIEKLLKTGKVQQDCLWQGRV 124
>ref|XP_004247827.1| PREDICTED: DNA polymerase delta subunit 4-like [Solanum
lycopersicum]
Length = 120
Score = 137 bits (346), Expect = 7e-30
Identities = 59/92 (64%), Positives = 80/92 (86%)
Frame = +2
Query: 389 TTPKHSASYGSDNAQPAALVSHGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWE 568
T PK++A+ GS+ QP+AL+SHGS DL+D+YD+NE +LRQFDMNM YGPC+GM+RLDRWE
Sbjct: 29 TKPKNAAAIGSNVTQPSALISHGSLDLKDNYDQNEEVLRQFDMNMVYGPCLGMNRLDRWE 88
Query: 569 RAKLMGLNPPEEIEKLLKSGQVKYENLWNGRV 664
RAK +G+NPP ++E+LL+S +V+ E LW+GRV
Sbjct: 89 RAKKLGMNPPADVERLLRSNKVRNECLWDGRV 120
>ref|XP_006360330.1| PREDICTED: uncharacterized protein LOC102606360 [Solanum tuberosum]
Length = 120
Score = 136 bits (343), Expect = 1e-29
Identities = 59/92 (64%), Positives = 78/92 (84%)
Frame = +2
Query: 389 TTPKHSASYGSDNAQPAALVSHGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWE 568
T PK++A+ GS+ QP AL+SHGS DL+D YD+NE +LRQFDMNM YGPC+GM+RLDRWE
Sbjct: 29 TKPKNAAAIGSNVTQPPALISHGSLDLKDSYDQNEEVLRQFDMNMVYGPCLGMNRLDRWE 88
Query: 569 RAKLMGLNPPEEIEKLLKSGQVKYENLWNGRV 664
RAK +G+NPP ++E+LL+S +V+ E LW+GRV
Sbjct: 89 RAKKLGMNPPTDVERLLRSNKVRNECLWDGRV 120
>ref|XP_006304299.1| hypothetical protein CARUB_v10010654mg [Capsella rubella]
gi|482573010|gb|EOA37197.1| hypothetical protein
CARUB_v10010654mg [Capsella rubella]
Length = 124
Score = 136 bits (342), Expect = 2e-29
Identities = 61/90 (67%), Positives = 75/90 (83%)
Frame = +2
Query: 395 PKHSASYGSDNAQPAALVSHGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWERA 574
PKH+A+ GSD QPAAL+SHGS DL DY + E MLRQFDM++AYGPC+GM+RLDRWERA
Sbjct: 35 PKHAAAQGSDVTQPAALISHGSIDLNGDYGKEEEMLRQFDMDIAYGPCLGMTRLDRWERA 94
Query: 575 KLMGLNPPEEIEKLLKSGQVKYENLWNGRV 664
+G+NPP EIEKLLK+G+V+ + LW GRV
Sbjct: 95 LRLGMNPPNEIEKLLKTGKVQQDCLWQGRV 124
>ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus communis]
gi|223536760|gb|EEF38401.1| delta DNA polymerase,
putative [Ricinus communis]
Length = 126
Score = 135 bits (340), Expect = 3e-29
Identities = 62/91 (68%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Frame = +2
Query: 395 PKHSASYGSDNAQPAALVSHGSA-DLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWER 571
PKH+A+ GS+ QP AL+SHG A DLQDDYD+NE +LRQFDMNMAYGPC+GM+R+ RWER
Sbjct: 36 PKHAAAIGSNITQPTALISHGGALDLQDDYDKNEEVLRQFDMNMAYGPCLGMTRVGRWER 95
Query: 572 AKLMGLNPPEEIEKLLKSGQVKYENLWNGRV 664
A+ +GLNPP++IE LLK G+V E LW+GRV
Sbjct: 96 AQRLGLNPPKQIEDLLKGGKVNSECLWDGRV 126
>ref|XP_006484706.1| PREDICTED: uncharacterized protein LOC102608934 [Citrus sinensis]
Length = 122
Score = 135 bits (339), Expect = 4e-29
Identities = 64/91 (70%), Positives = 75/91 (82%)
Frame = +2
Query: 392 TPKHSASYGSDNAQPAALVSHGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWER 571
TPK SA++GSD QP AL+SHGS DL+ DYD+NE +LRQFDMNMAYGPCIGMSRL RWER
Sbjct: 32 TPKISATFGSDVTQPTALISHGSLDLKGDYDDNEEVLRQFDMNMAYGPCIGMSRLARWER 91
Query: 572 AKLMGLNPPEEIEKLLKSGQVKYENLWNGRV 664
A +GLNPP+EIE LLK+ +V+ E LW RV
Sbjct: 92 AYRLGLNPPKEIEVLLKTRKVQAECLWEDRV 122
>ref|XP_006437397.1| hypothetical protein CICLE_v10033086mg [Citrus clementina]
gi|557539593|gb|ESR50637.1| hypothetical protein
CICLE_v10033086mg [Citrus clementina]
Length = 122
Score = 135 bits (339), Expect = 4e-29
Identities = 64/91 (70%), Positives = 75/91 (82%)
Frame = +2
Query: 392 TPKHSASYGSDNAQPAALVSHGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWER 571
TPK SA++GSD QP AL+SHGS DL+ DYD+NE +LRQFDMNMAYGPCIGMSRL RWER
Sbjct: 32 TPKISATFGSDVTQPTALISHGSLDLKGDYDDNEEVLRQFDMNMAYGPCIGMSRLARWER 91
Query: 572 AKLMGLNPPEEIEKLLKSGQVKYENLWNGRV 664
A +GLNPP+EIE LLK+ +V+ E LW RV
Sbjct: 92 AYRLGLNPPKEIEVLLKTRKVQAECLWEDRV 122
>gb|EMJ19797.1| hypothetical protein PRUPE_ppa013345mg [Prunus persica]
Length = 128
Score = 132 bits (333), Expect = 2e-28
Identities = 60/92 (65%), Positives = 75/92 (81%)
Frame = +2
Query: 389 TTPKHSASYGSDNAQPAALVSHGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWE 568
TT +AS+GSD QP AL+SH S DL+DDYDE E +LRQFDMNMAYGPC+GM+RL+RWE
Sbjct: 37 TTHPAAASFGSDVTQPTALMSHASLDLKDDYDEQEALLRQFDMNMAYGPCVGMTRLERWE 96
Query: 569 RAKLMGLNPPEEIEKLLKSGQVKYENLWNGRV 664
RA ++GLNPP+E+E LL G+V E LW+GR+
Sbjct: 97 RACILGLNPPKEVESLLTGGKVCCECLWDGRI 128
>ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209940 [Cucumis sativus]
gi|449523375|ref|XP_004168699.1| PREDICTED:
uncharacterized protein LOC101228956 [Cucumis sativus]
Length = 125
Score = 129 bits (325), Expect = 2e-27
Identities = 61/91 (67%), Positives = 74/91 (81%)
Frame = +2
Query: 392 TPKHSASYGSDNAQPAALVSHGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWER 571
+P +SAS GSD QPAALVSHGS DLQDDY +EN LRQFDMN AYGPC+GM+R+ RWER
Sbjct: 35 SPANSASLGSDAVQPAALVSHGSLDLQDDYGVSENTLRQFDMNTAYGPCLGMTRMARWER 94
Query: 572 AKLMGLNPPEEIEKLLKSGQVKYENLWNGRV 664
A +GLNPP++I LLK+G+V+ E LW+ RV
Sbjct: 95 ACSLGLNPPKDIGTLLKAGKVQLECLWDSRV 125
>gb|EOY10256.1| Polymerase delta 4 [Theobroma cacao]
Length = 178
Score = 127 bits (319), Expect = 9e-27
Identities = 59/92 (64%), Positives = 78/92 (84%), Gaps = 1/92 (1%)
Frame = +2
Query: 392 TPKHSASYGSDNAQPAALVSHG-SADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWE 568
+PKH+A++GS+ QP AL S G S DL+DD+DE E +LRQFDMNMAYGPC+G++R+ RWE
Sbjct: 87 SPKHAATFGSNITQPFALTSPGGSLDLKDDFDEQEEVLRQFDMNMAYGPCLGITRMARWE 146
Query: 569 RAKLMGLNPPEEIEKLLKSGQVKYENLWNGRV 664
RA+ +GLNPP+EIE LLK G+VK E+L++GRV
Sbjct: 147 RAQRLGLNPPKEIENLLKGGKVKLESLFDGRV 178
>ref|XP_002325451.1| DNA polymerase delta subunit 4 family protein [Populus trichocarpa]
gi|222862326|gb|EEE99832.1| DNA polymerase delta subunit
4 family protein [Populus trichocarpa]
Length = 121
Score = 125 bits (315), Expect = 3e-26
Identities = 58/86 (67%), Positives = 72/86 (83%)
Frame = +2
Query: 401 HSASYGSDNAQPAALVSHGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWERAKL 580
H+A+ GSD QP ALVSH S DL+DDYD++E++LRQFDMN AYGPC+GMSRL RWERA+
Sbjct: 34 HAATLGSDITQPTALVSHDSPDLKDDYDKHEDVLRQFDMNPAYGPCLGMSRLARWERAQR 93
Query: 581 MGLNPPEEIEKLLKSGQVKYENLWNG 658
+GLNPP+EIE LLK +V+ E LW+G
Sbjct: 94 LGLNPPKEIEGLLKGEKVRSECLWDG 119
>ref|XP_006349440.1| PREDICTED: DNA polymerase delta subunit 4-like [Solanum tuberosum]
Length = 133
Score = 125 bits (313), Expect = 4e-26
Identities = 58/92 (63%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Frame = +2
Query: 392 TPKHSASYGSDNAQPAALVSHGSADLQDD-YDENENMLRQFDMNMAYGPCIGMSRLDRWE 568
TPK +A+ S+ + AL+SHGS DLQDD YDENE +LRQFDMNM YGPC+G+SRLDRWE
Sbjct: 42 TPKLAAARSSNITRSPALISHGSPDLQDDDYDENEELLRQFDMNMTYGPCLGLSRLDRWE 101
Query: 569 RAKLMGLNPPEEIEKLLKSGQVKYENLWNGRV 664
RAK GLNPP ++E +L+S +V+ E LW+G V
Sbjct: 102 RAKSFGLNPPRDVEPILRSSKVRNECLWDGMV 133
>ref|XP_002319772.1| DNA polymerase delta subunit 4 family protein [Populus trichocarpa]
gi|118488437|gb|ABK96033.1| unknown [Populus
trichocarpa] gi|222858148|gb|EEE95695.1| DNA polymerase
delta subunit 4 family protein [Populus trichocarpa]
Length = 122
Score = 123 bits (308), Expect = 2e-25
Identities = 59/88 (67%), Positives = 68/88 (77%)
Frame = +2
Query: 401 HSASYGSDNAQPAALVSHGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWERAKL 580
H AS GSD QP A VSHGS D +D YDE+E +LRQFDMNMAYGPC+GMSRL RWERA+
Sbjct: 35 HIASLGSDITQPTAQVSHGSPDHKDYYDEHEELLRQFDMNMAYGPCLGMSRLARWERAQR 94
Query: 581 MGLNPPEEIEKLLKSGQVKYENLWNGRV 664
+GLNPP E E LLK+ V+ E W+GRV
Sbjct: 95 LGLNPPNEFEGLLKAEMVQSECWWDGRV 122
>gb|ABK93288.1| unknown [Populus trichocarpa]
Length = 122
Score = 123 bits (308), Expect = 2e-25
Identities = 59/88 (67%), Positives = 68/88 (77%)
Frame = +2
Query: 401 HSASYGSDNAQPAALVSHGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWERAKL 580
H AS GSD QP A VSHGS D +D YDE+E +LRQFDMNMAYGPC+GMSRL RWERA+
Sbjct: 35 HIASLGSDITQPTAQVSHGSPDHKDYYDEHEGLLRQFDMNMAYGPCLGMSRLARWERAQR 94
Query: 581 MGLNPPEEIEKLLKSGQVKYENLWNGRV 664
+GLNPP E E LLK+ V+ E W+GRV
Sbjct: 95 LGLNPPNEFEGLLKAEMVQSECWWDGRV 122
>ref|XP_004288555.1| PREDICTED: DNA polymerase delta subunit 4-like [Fragaria vesca
subsp. vesca]
Length = 112
Score = 120 bits (300), Expect = 1e-24
Identities = 51/87 (58%), Positives = 71/87 (81%)
Frame = +2
Query: 404 SASYGSDNAQPAALVSHGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWERAKLM 583
SAS GS QP+AL+SH + DL+DDYD E +LRQFD+N AYGPC+G++RL RWERA +
Sbjct: 26 SASLGSKVTQPSALISHAAPDLKDDYDAQEELLRQFDLNTAYGPCLGITRLARWERACRL 85
Query: 584 GLNPPEEIEKLLKSGQVKYENLWNGRV 664
G++PP+E+E LLK G+V+ ++LW+GR+
Sbjct: 86 GMDPPKEVESLLKGGKVRLDSLWDGRI 112
>gb|EOY10253.1| Polymerase delta 4, putative [Theobroma cacao]
Length = 127
Score = 119 bits (297), Expect = 3e-24
Identities = 57/92 (61%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
Frame = +2
Query: 392 TPKHSASYGSDNAQPAALVS-HGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWE 568
+PK A++ SD QPAAL GS DL+DD DE E +LRQFDMNM YGPC+G++R+ RWE
Sbjct: 36 SPKQPATFSSDITQPAALTFLGGSLDLKDDSDEQEEVLRQFDMNMVYGPCLGITRMARWE 95
Query: 569 RAKLMGLNPPEEIEKLLKSGQVKYENLWNGRV 664
RA+ +GLNPP+EIE LLK G VK E+L++GRV
Sbjct: 96 RAQRLGLNPPKEIENLLKGGTVKLESLFDGRV 127
>ref|XP_002265281.1| PREDICTED: uncharacterized protein LOC100263057 [Vitis vinifera]
Length = 122
Score = 116 bits (290), Expect = 2e-23
Identities = 55/90 (61%), Positives = 68/90 (75%)
Frame = +2
Query: 395 PKHSASYGSDNAQPAALVSHGSADLQDDYDENENMLRQFDMNMAYGPCIGMSRLDRWERA 574
P H A+ GSD QP+ L +H D D+YD NE +LRQFDMNMAYGPC+GMSRL RWERA
Sbjct: 35 PTHVATLGSDVVQPSTLSAHNLQD--DEYDGNETVLRQFDMNMAYGPCLGMSRLARWERA 92
Query: 575 KLMGLNPPEEIEKLLKSGQVKYENLWNGRV 664
+ +GLNPP+EIE LLK G+ + + LW+G V
Sbjct: 93 QRLGLNPPKEIETLLKQGKARADCLWDGCV 122