BLASTX nr result
ID: Rauwolfia21_contig00012096
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00012096
(229 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC18499.1| Retrovirus-related Pol polyprotein from transposo... 76 1e-23
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera] 75 2e-22
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 71 2e-21
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] 71 8e-21
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 69 1e-20
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 70 5e-20
gb|EXB77770.1| hypothetical protein L484_000113 [Morus notabilis] 65 5e-19
gb|EMT06479.1| hypothetical protein F775_22266 [Aegilops tauschii] 74 7e-18
gb|EMS47553.1| Glutamyl-tRNA reductase 1, chloroplastic [Triticu... 74 1e-17
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 78 2e-17
dbj|BAA22288.1| polyprotein [Oryza australiensis] 75 4e-17
gb|EMT27510.1| hypothetical protein F775_52220 [Aegilops tauschii] 74 6e-17
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc... 73 8e-17
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 73 1e-16
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group] 73 1e-16
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc... 73 1e-16
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 72 1e-16
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 72 1e-16
gb|EMT12108.1| hypothetical protein F775_04960 [Aegilops tauschii] 70 1e-16
ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776... 70 2e-16
>gb|EXC18499.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 414
Score = 76.3 bits (186), Expect(2) = 1e-23
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYM 224
ETFS VAM+KSIRILLAIA ++DYEIW+MDVKT FLNGY +E IYM
Sbjct: 364 ETFSPVAMLKSIRILLAIAAYFDYEIWQMDVKTPFLNGYLDETIYM 409
Score = 59.3 bits (142), Expect(2) = 1e-23
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
KRG DGKVET+KARLVAKGYTQKEG+DY + F
Sbjct: 335 KRGVDGKVETYKARLVAKGYTQKEGVDYEETF 366
>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
Length = 961
Score = 75.5 bits (184), Expect(2) = 2e-22
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYM 224
+TFS VAM+KSIRILL+IA +YDYEIW+MDVKTTFLNG+ E IYM
Sbjct: 663 DTFSPVAMLKSIRILLSIAAYYDYEIWQMDVKTTFLNGHLEETIYM 708
Score = 55.8 bits (133), Expect(2) = 2e-22
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
KRG +GKVETFKARLVAKG+TQKEG+DY F
Sbjct: 634 KRGPNGKVETFKARLVAKGFTQKEGVDYEDTF 665
>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 71.2 bits (173), Expect(2) = 2e-21
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYM 224
ETFS VAM+KSIRILL+IA ++DYEIW+MDVKT FLNG +E IYM
Sbjct: 870 ETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGSLDECIYM 915
Score = 57.0 bits (136), Expect(2) = 2e-21
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
KRG DGKV+T+KA+LVAKGYTQKEGIDY + F
Sbjct: 841 KRGIDGKVQTYKAKLVAKGYTQKEGIDYEETF 872
>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
Length = 633
Score = 71.2 bits (173), Expect(2) = 8e-21
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYM 224
ETFS VAM+KSIRILL+IA ++DYEIW+MDVKT FLNG +E IYM
Sbjct: 192 ETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGSLDECIYM 237
Score = 54.7 bits (130), Expect(2) = 8e-21
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
KRG DGK +T+KA LVAKGYTQKEGIDY + F
Sbjct: 163 KRGIDGKXZTYKAXLVAKGYTQKEGIDYEETF 194
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 69.3 bits (168), Expect(2) = 1e-20
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYM 224
+TFS V M+KSIRILL+I +YDYEIW+MDVKT FLNG+ E IYM
Sbjct: 227 DTFSPVXMLKSIRILLSIXAYYDYEIWQMDVKTXFLNGHLEETIYM 272
Score = 55.8 bits (133), Expect(2) = 1e-20
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
KRG +GKVETFKARLVAKG+TQKEG+DY F
Sbjct: 198 KRGPNGKVETFKARLVAKGFTQKEGVDYEDTF 229
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 70.1 bits (170), Expect(2) = 5e-20
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYM 224
ETFS VAM+KSIRILL+IA Y+YEIW+MDVKT FLNG E IYM
Sbjct: 887 ETFSPVAMLKSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYM 932
Score = 53.1 bits (126), Expect(2) = 5e-20
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
KR GKV+TFKARLVAKGYTQKEG+DY + F
Sbjct: 858 KRDQAGKVQTFKARLVAKGYTQKEGVDYEETF 889
>gb|EXB77770.1| hypothetical protein L484_000113 [Morus notabilis]
Length = 294
Score = 65.1 bits (157), Expect(2) = 5e-19
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYMS 227
+TFSLVAM+KSIRI L+I DYEIW+MDVKT FLNG +E IYM+
Sbjct: 248 DTFSLVAMLKSIRIRLSITAALDYEIWQMDVKTAFLNGNPDERIYMA 294
Score = 54.7 bits (130), Expect(2) = 5e-19
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
KRG DG VETFKAR+VAKGY QKEGIDY F
Sbjct: 219 KRGPDGNVETFKARVVAKGYAQKEGIDYEDTF 250
>gb|EMT06479.1| hypothetical protein F775_22266 [Aegilops tauschii]
Length = 898
Score = 74.3 bits (181), Expect(2) = 7e-18
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYM 224
ETFS VAM+KS+RI+LAIA YDYEIW+MDVKT FLNG+ E++YM
Sbjct: 835 ETFSPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYM 880
Score = 41.6 bits (96), Expect(2) = 7e-18
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
K ADG V +KARLVAKG+ Q +GIDY + F
Sbjct: 806 KTDADGNVTVYKARLVAKGFRQVQGIDYDETF 837
>gb|EMS47553.1| Glutamyl-tRNA reductase 1, chloroplastic [Triticum urartu]
Length = 637
Score = 74.3 bits (181), Expect(2) = 1e-17
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYM 224
ETFS VAM+KS+RI+LAIA YDYEIW+MDVKT FLNG+ E++YM
Sbjct: 93 ETFSPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYM 138
Score = 40.8 bits (94), Expect(2) = 1e-17
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
K ADG + +KARLVAKG+ Q +GIDY + F
Sbjct: 64 KTDADGNITIYKARLVAKGFRQVQGIDYDETF 95
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 77.8 bits (190), Expect(2) = 2e-17
Identities = 35/47 (74%), Positives = 43/47 (91%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYMS 227
ETFSLVAM+KSIRI+LAIA ++DYEIW+MDVKT FLNG +ED+YM+
Sbjct: 873 ETFSLVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGKLSEDVYMT 919
Score = 37.0 bits (84), Expect(2) = 2e-17
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +1
Query: 13 DGKVETFKARLVAKGYTQKEGIDYRKPF 96
DG V KARLVAKG+ Q +G+DY + F
Sbjct: 848 DGNVHIHKARLVAKGFRQVQGVDYDETF 875
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 74.7 bits (182), Expect(2) = 4e-17
Identities = 34/46 (73%), Positives = 41/46 (89%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYM 224
ETFS VAM+KSIRI+LAIA ++DYEIW+MDVKT FLNG +ED+YM
Sbjct: 877 ETFSPVAMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGNLSEDVYM 922
Score = 38.9 bits (89), Expect(2) = 4e-17
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
K DG V +KARLVAKG+ Q +G+DY + F
Sbjct: 848 KADMDGNVHIYKARLVAKGFKQIQGVDYDETF 879
>gb|EMT27510.1| hypothetical protein F775_52220 [Aegilops tauschii]
Length = 1712
Score = 73.9 bits (180), Expect(2) = 6e-17
Identities = 32/46 (69%), Positives = 40/46 (86%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYM 224
ETFS +AM+KS+RI+LAIA YDYEIW+MDVKT FLNG+ E++YM
Sbjct: 259 ETFSPIAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYM 304
Score = 38.9 bits (89), Expect(2) = 6e-17
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
K ADG V +KARLVA G+ Q +GIDY + F
Sbjct: 230 KTEADGNVTVYKARLVAMGFRQVQGIDYDETF 261
>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1050
Score = 73.2 bits (178), Expect(2) = 8e-17
Identities = 32/47 (68%), Positives = 42/47 (89%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYMS 227
ETFSLVAM+KSI+I+LAI ++DYEIW+MDVKT F+NG +ED+YM+
Sbjct: 625 ETFSLVAMLKSIQIVLAITAYFDYEIWQMDVKTAFVNGNIDEDVYMT 671
Score = 39.3 bits (90), Expect(2) = 8e-17
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
K DG V +KARLVAKG+ Q +G+DY + F
Sbjct: 596 KTDVDGNVHIYKARLVAKGFRQIQGVDYDETF 627
>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1073
Score = 72.8 bits (177), Expect(2) = 1e-16
Identities = 33/47 (70%), Positives = 42/47 (89%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYMS 227
ETFS VAM+KSIRI+LAIA ++DYEIW+M+VKT FLNG +ED+YM+
Sbjct: 807 ETFSPVAMLKSIRIVLAIAAYFDYEIWQMEVKTAFLNGNHDEDVYMT 853
Score = 39.3 bits (90), Expect(2) = 1e-16
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
K DG V +KARLVAKG+ Q +G+DY + F
Sbjct: 778 KTDVDGNVHIYKARLVAKGFRQIQGVDYDETF 809
>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1063
Score = 72.8 bits (177), Expect(2) = 1e-16
Identities = 33/47 (70%), Positives = 42/47 (89%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYMS 227
ETFS VAM+KSIRI+LAIA ++DYEIW+M+VKT FLNG +ED+YM+
Sbjct: 797 ETFSPVAMLKSIRIVLAIAAYFDYEIWQMEVKTAFLNGNHDEDVYMT 843
Score = 39.3 bits (90), Expect(2) = 1e-16
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
K DG V +KARLVAKG+ Q +G+DY + F
Sbjct: 768 KTDVDGNVHIYKARLVAKGFRQIQGVDYDETF 799
>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 829
Score = 72.8 bits (177), Expect(2) = 1e-16
Identities = 33/47 (70%), Positives = 42/47 (89%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYMS 227
ETFS AM+KSIRI+LAIA +++YEIW+MDVKTTFLNG +ED+YM+
Sbjct: 662 ETFSPFAMLKSIRIVLAIAAYFNYEIWQMDVKTTFLNGNLDEDVYMT 708
Score = 39.3 bits (90), Expect(2) = 1e-16
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
K DG V +KARLVAKG+ Q +G+DY + F
Sbjct: 633 KTDVDGNVHIYKARLVAKGFRQIQGVDYDETF 664
>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 72.4 bits (176), Expect(2) = 1e-16
Identities = 33/47 (70%), Positives = 41/47 (87%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYMS 227
ETF VAM+KSIRI+LAIA ++DYEIW+MDVKT FLNG +ED+YM+
Sbjct: 800 ETFLPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMT 846
Score = 39.3 bits (90), Expect(2) = 1e-16
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
K DG V +KARLVAKG+ Q +G+DY + F
Sbjct: 771 KTDVDGNVHIYKARLVAKGFRQIQGVDYDETF 802
>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 72.4 bits (176), Expect(2) = 1e-16
Identities = 33/47 (70%), Positives = 41/47 (87%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYMS 227
ETF VAM+KSIRI+LAIA ++DYEIW+MDVKT FLNG +ED+YM+
Sbjct: 742 ETFLPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMT 788
Score = 39.3 bits (90), Expect(2) = 1e-16
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
K DG V +KARLVAKG+ Q +G+DY + F
Sbjct: 713 KTDVDGNVHIYKARLVAKGFRQIQGVDYDETF 744
>gb|EMT12108.1| hypothetical protein F775_04960 [Aegilops tauschii]
Length = 610
Score = 70.1 bits (170), Expect(2) = 1e-16
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIY 221
ETFS VAM+KS+RI+LAIA YDYEIW+MDVKT FLNG+ E+ +
Sbjct: 76 ETFSPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEEFF 120
Score = 41.6 bits (96), Expect(2) = 1e-16
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
K ADG V +KARLVAKG+ Q +GIDY + F
Sbjct: 47 KTDADGNVTVYKARLVAKGFRQVQGIDYDETF 78
>ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776990, partial [Setaria
italica]
Length = 1686
Score = 70.5 bits (171), Expect(2) = 2e-16
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +3
Query: 87 ETFSLVAMVKSIRILLAIACHYDYEIWKMDVKTTFLNGYFNEDIYM 224
ETFS V M+KSIRI+LAIA ++DYEIW+MDVKT FLNG +D+YM
Sbjct: 288 ETFSPVVMLKSIRIILAIAAYFDYEIWQMDVKTAFLNGNLAKDVYM 333
Score = 40.4 bits (93), Expect(2) = 2e-16
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +1
Query: 1 KRGADGKVETFKARLVAKGYTQKEGIDYRKPF 96
K+ DG V +KARLVAKG+ Q +G+DY + F
Sbjct: 259 KKDMDGNVHIYKARLVAKGFRQVQGVDYDETF 290