BLASTX nr result
ID: Rauwolfia21_contig00012033
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00012033
(456 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY02217.1| Helicase protein with RING/U-box domain isoform 1... 86 3e-30
gb|EOY02219.1| Helicase protein with RING/U-box domain isoform 3... 86 3e-30
gb|EOY02218.1| Helicase protein with RING/U-box domain isoform 2... 86 3e-30
ref|XP_004289174.1| PREDICTED: ATP-dependent helicase rhp16-like... 84 4e-30
ref|XP_006342255.1| PREDICTED: DNA repair protein RAD16-like [So... 80 4e-30
ref|XP_002269303.2| PREDICTED: ATP-dependent helicase rhp16-like... 84 9e-30
emb|CBI28814.3| unnamed protein product [Vitis vinifera] 84 9e-30
ref|XP_003605955.1| DNA repair protein RAD5 [Medicago truncatula... 86 1e-29
ref|XP_004240150.1| PREDICTED: ATP-dependent helicase rhp16-like... 78 3e-29
ref|XP_006592809.1| PREDICTED: ATP-dependent helicase rhp16-like... 84 8e-29
ref|XP_003539500.1| PREDICTED: ATP-dependent helicase rhp16-like... 84 8e-29
ref|XP_003541950.1| PREDICTED: ATP-dependent helicase rhp16-like... 84 1e-28
ref|XP_004506273.1| PREDICTED: ATP-dependent helicase rhp16-like... 86 2e-28
ref|XP_004506272.1| PREDICTED: ATP-dependent helicase rhp16-like... 86 2e-28
gb|EXB37878.1| ATP-dependent helicase rhp16 [Morus notabilis] 83 2e-28
ref|NP_172004.1| Helicase protein with RING/U-box domain [Arabid... 86 5e-28
gb|AAB71467.1| Similar to Saccharomyces RAD16 (gb|X78993) [Arabi... 86 5e-28
ref|XP_002892268.1| SNF2 domain-containing protein [Arabidopsis ... 86 2e-27
ref|XP_004248914.1| PREDICTED: DNA repair protein RAD16-like [So... 74 3e-27
gb|EMJ16163.1| hypothetical protein PRUPE_ppa001451mg [Prunus pe... 80 3e-27
>gb|EOY02217.1| Helicase protein with RING/U-box domain isoform 1 [Theobroma cacao]
Length = 896
Score = 86.3 bits (212), Expect(2) = 3e-30
Identities = 42/53 (79%), Positives = 48/53 (90%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K ++ VQLVGSM MAARDAAIK+FT++PDCKIFLMSLK GGVALNLTVASH+
Sbjct: 765 KSGINCVQLVGSMSMAARDAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHV 817
Score = 71.2 bits (173), Expect(2) = 3e-30
Identities = 46/109 (42%), Positives = 55/109 (50%), Gaps = 38/109 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDN---------EGYVRDAFL 154
VT C HVFCK+ LIDF A++GQVS SCS+ LTVD T D +G+ + L
Sbjct: 654 VTACAHVFCKACLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTTLKGFKSSSIL 713
Query: 155 -----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AKGIVFSQFTSFLDLI+YS
Sbjct: 714 NRIQLNDFQTSTKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYS 762
>gb|EOY02219.1| Helicase protein with RING/U-box domain isoform 3 [Theobroma cacao]
Length = 869
Score = 86.3 bits (212), Expect(2) = 3e-30
Identities = 42/53 (79%), Positives = 48/53 (90%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K ++ VQLVGSM MAARDAAIK+FT++PDCKIFLMSLK GGVALNLTVASH+
Sbjct: 765 KSGINCVQLVGSMSMAARDAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHV 817
Score = 71.2 bits (173), Expect(2) = 3e-30
Identities = 46/109 (42%), Positives = 55/109 (50%), Gaps = 38/109 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDN---------EGYVRDAFL 154
VT C HVFCK+ LIDF A++GQVS SCS+ LTVD T D +G+ + L
Sbjct: 654 VTACAHVFCKACLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTTLKGFKSSSIL 713
Query: 155 -----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AKGIVFSQFTSFLDLI+YS
Sbjct: 714 NRIQLNDFQTSTKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYS 762
>gb|EOY02218.1| Helicase protein with RING/U-box domain isoform 2 [Theobroma cacao]
gi|508710323|gb|EOY02220.1| Helicase protein with
RING/U-box domain isoform 2 [Theobroma cacao]
Length = 836
Score = 86.3 bits (212), Expect(2) = 3e-30
Identities = 42/53 (79%), Positives = 48/53 (90%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K ++ VQLVGSM MAARDAAIK+FT++PDCKIFLMSLK GGVALNLTVASH+
Sbjct: 705 KSGINCVQLVGSMSMAARDAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHV 757
Score = 71.2 bits (173), Expect(2) = 3e-30
Identities = 46/109 (42%), Positives = 55/109 (50%), Gaps = 38/109 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDN---------EGYVRDAFL 154
VT C HVFCK+ LIDF A++GQVS SCS+ LTVD T D +G+ + L
Sbjct: 594 VTACAHVFCKACLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTTLKGFKSSSIL 653
Query: 155 -----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AKGIVFSQFTSFLDLI+YS
Sbjct: 654 NRIQLNDFQTSTKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYS 702
>ref|XP_004289174.1| PREDICTED: ATP-dependent helicase rhp16-like [Fragaria vesca subsp.
vesca]
Length = 792
Score = 83.6 bits (205), Expect(2) = 4e-30
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K V+ VQLVGSM M+ARD AIKKFT++PDC+IFLMSLK GGVALNLTVASH+
Sbjct: 661 KSGVNCVQLVGSMTMSARDNAIKKFTEDPDCRIFLMSLKAGGVALNLTVASHV 713
Score = 73.6 bits (179), Expect(2) = 4e-30
Identities = 47/109 (43%), Positives = 55/109 (50%), Gaps = 38/109 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRS--------------------- 118
VT C HVFCK+ LIDF A++GQVS SCSK LTVD T S
Sbjct: 550 VTACEHVFCKACLIDFSASLGQVSCPSCSKLLTVDLTTSVGAGNQTTKTTIKGFRSSSIL 609
Query: 119 -----------------KDNEGYVRDAFLTAKGIVFSQFTSFLDLIHYS 214
K+ ++ + +AKGIVFSQFTSFLDLIHYS
Sbjct: 610 NRIQLENFQTSTKIEALKEEIRFMVERDGSAKGIVFSQFTSFLDLIHYS 658
>ref|XP_006342255.1| PREDICTED: DNA repair protein RAD16-like [Solanum tuberosum]
Length = 892
Score = 80.1 bits (196), Expect(2) = 4e-30
Identities = 50/108 (46%), Positives = 57/108 (52%), Gaps = 37/108 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDNE--------GYVRDAFL- 154
VT CTHVFCKS LIDF A++GQVS SCSKPLTVDFT + + G+ + L
Sbjct: 651 VTSCTHVFCKSCLIDFSASVGQVSCPSCSKPLTVDFTANDKGDQKSKATIKGFRSSSILN 710
Query: 155 ----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AK IVFSQFTSFLDLIHYS
Sbjct: 711 RIHLDDFQTSTKIEALREEIRFMIERDGSAKAIVFSQFTSFLDLIHYS 758
Score = 77.0 bits (188), Expect(2) = 4e-30
Identities = 38/53 (71%), Positives = 45/53 (84%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K VS VQL GSM M ARD+AI++FT++PDC+IFLMSLK GGVALNLTVAS +
Sbjct: 761 KSGVSCVQLDGSMSMTARDSAIRRFTEDPDCRIFLMSLKAGGVALNLTVASQV 813
>ref|XP_002269303.2| PREDICTED: ATP-dependent helicase rhp16-like [Vitis vinifera]
Length = 989
Score = 83.6 bits (205), Expect(2) = 9e-30
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K ++ VQLVGSM MAARDAAI +FT+ PDCKIFLMSLK GGVALNLTVASH+
Sbjct: 858 KSGITCVQLVGSMSMAARDAAISRFTNEPDCKIFLMSLKAGGVALNLTVASHV 910
Score = 72.4 bits (176), Expect(2) = 9e-30
Identities = 47/109 (43%), Positives = 54/109 (49%), Gaps = 38/109 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDN---------EGYVRDAFL 154
VT C HVFCK+ L DF +GQVS SCSKPLTVD T S D +G+ + L
Sbjct: 747 VTSCAHVFCKACLNDFSTTLGQVSCPSCSKPLTVDLTTSMDPGDRDMKTTIKGFKPSSIL 806
Query: 155 -----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AKGIVFSQFTSFLDLI+YS
Sbjct: 807 NRIRLDDFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLINYS 855
>emb|CBI28814.3| unnamed protein product [Vitis vinifera]
Length = 964
Score = 83.6 bits (205), Expect(2) = 9e-30
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K ++ VQLVGSM MAARDAAI +FT+ PDCKIFLMSLK GGVALNLTVASH+
Sbjct: 833 KSGITCVQLVGSMSMAARDAAISRFTNEPDCKIFLMSLKAGGVALNLTVASHV 885
Score = 72.4 bits (176), Expect(2) = 9e-30
Identities = 47/109 (43%), Positives = 54/109 (49%), Gaps = 38/109 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDN---------EGYVRDAFL 154
VT C HVFCK+ L DF +GQVS SCSKPLTVD T S D +G+ + L
Sbjct: 722 VTSCAHVFCKACLNDFSTTLGQVSCPSCSKPLTVDLTTSMDPGDRDMKTTIKGFKPSSIL 781
Query: 155 -----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AKGIVFSQFTSFLDLI+YS
Sbjct: 782 NRIRLDDFQTSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLINYS 830
>ref|XP_003605955.1| DNA repair protein RAD5 [Medicago truncatula]
gi|355507010|gb|AES88152.1| DNA repair protein RAD5
[Medicago truncatula]
Length = 935
Score = 85.9 bits (211), Expect(2) = 1e-29
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K VS VQLVGSM + ARD AIKKFTD+PDCKIFLMSLK GGVALNLTVASH+
Sbjct: 804 KSGVSCVQLVGSMTLTARDNAIKKFTDDPDCKIFLMSLKAGGVALNLTVASHV 856
Score = 69.7 bits (169), Expect(2) = 1e-29
Identities = 45/108 (41%), Positives = 54/108 (50%), Gaps = 37/108 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDN--------EGYVRDAFL- 154
VT C H FCK LIDF A++GQ+S SCSK LTVD T +KD +G+ + L
Sbjct: 694 VTSCEHTFCKGCLIDFSASLGQISCPSCSKLLTVDLTSNKDAVVDKTTTIKGFRSSSILN 753
Query: 155 ----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AK IVFSQFTSFLDLI+YS
Sbjct: 754 RIQIENFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDLINYS 801
>ref|XP_004240150.1| PREDICTED: ATP-dependent helicase rhp16-like [Solanum lycopersicum]
Length = 889
Score = 78.2 bits (191), Expect(2) = 3e-29
Identities = 48/108 (44%), Positives = 57/108 (52%), Gaps = 37/108 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDNE--------GYVRDAFL- 154
VT CTH+FCKS LIDF A++GQVS SCS+PLTVDFT + + G+ + L
Sbjct: 648 VTSCTHIFCKSCLIDFSASVGQVSCPSCSEPLTVDFTANDKGDQKSKATIKGFRSSSILN 707
Query: 155 ----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AK IVFSQFTSFLDLIHYS
Sbjct: 708 RIHLDNFQTSTKIEALREEIRFMIEIDGSAKAIVFSQFTSFLDLIHYS 755
Score = 75.9 bits (185), Expect(2) = 3e-29
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K VS VQL GSM M ARD+AI +FT++PDC+IFLMSLK GGVALNLTVAS +
Sbjct: 758 KSGVSCVQLDGSMSMTARDSAITRFTEDPDCRIFLMSLKAGGVALNLTVASQV 810
>ref|XP_006592809.1| PREDICTED: ATP-dependent helicase rhp16-like isoform X2 [Glycine
max]
Length = 927
Score = 84.0 bits (206), Expect(2) = 8e-29
Identities = 42/53 (79%), Positives = 47/53 (88%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K VS VQL GSM +AARDAAIK+FT++PDCKIFLMSLK GGVALNLTVASH+
Sbjct: 796 KSGVSCVQLNGSMSLAARDAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHV 848
Score = 68.9 bits (167), Expect(2) = 8e-29
Identities = 45/109 (41%), Positives = 56/109 (51%), Gaps = 38/109 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDN---------EGYVRDAFL 154
VT C H FCK+ LIDF A++G+VS +CSK LTVD T +KD +G+ + L
Sbjct: 685 VTTCEHAFCKACLIDFSASLGRVSCPTCSKLLTVDLTFNKDVGDQANKTTIKGFRSSSIL 744
Query: 155 -----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AKGIVFSQFTSFLDLI+YS
Sbjct: 745 NRICLENFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYS 793
>ref|XP_003539500.1| PREDICTED: ATP-dependent helicase rhp16-like isoform X1 [Glycine
max]
Length = 926
Score = 84.0 bits (206), Expect(2) = 8e-29
Identities = 42/53 (79%), Positives = 47/53 (88%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K VS VQL GSM +AARDAAIK+FT++PDCKIFLMSLK GGVALNLTVASH+
Sbjct: 795 KSGVSCVQLNGSMSLAARDAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHV 847
Score = 68.9 bits (167), Expect(2) = 8e-29
Identities = 45/109 (41%), Positives = 56/109 (51%), Gaps = 38/109 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDN---------EGYVRDAFL 154
VT C H FCK+ LIDF A++G+VS +CSK LTVD T +KD +G+ + L
Sbjct: 684 VTTCEHAFCKACLIDFSASLGRVSCPTCSKLLTVDLTFNKDVGDQANKTTIKGFRSSSIL 743
Query: 155 -----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AKGIVFSQFTSFLDLI+YS
Sbjct: 744 NRICLENFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYS 792
>ref|XP_003541950.1| PREDICTED: ATP-dependent helicase rhp16-like [Glycine max]
Length = 924
Score = 84.0 bits (206), Expect(2) = 1e-28
Identities = 42/53 (79%), Positives = 47/53 (88%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K VS VQL GSM +AARDAAIK+FT++PDCKIFLMSLK GGVALNLTVASH+
Sbjct: 793 KSGVSCVQLNGSMSLAARDAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHV 845
Score = 68.2 bits (165), Expect(2) = 1e-28
Identities = 44/109 (40%), Positives = 56/109 (51%), Gaps = 38/109 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDN---------EGYVRDAFL 154
VT C H FCK+ LIDF +++G+VS +CSK LTVD T +KD +G+ + L
Sbjct: 682 VTSCEHAFCKACLIDFSSSLGRVSCPTCSKLLTVDLTSNKDVGDQANKTTIKGFRSSSIL 741
Query: 155 -----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AKGIVFSQFTSFLDLI+YS
Sbjct: 742 NRIRLENFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYS 790
>ref|XP_004506273.1| PREDICTED: ATP-dependent helicase rhp16-like isoform X2 [Cicer
arietinum]
Length = 888
Score = 85.5 bits (210), Expect(2) = 2e-28
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K VS VQL GSM + ARDAAIKKFTD+PDCKIFLMSLK GGVALNLTVASH+
Sbjct: 757 KSGVSCVQLNGSMTLGARDAAIKKFTDDPDCKIFLMSLKAGGVALNLTVASHV 809
Score = 66.2 bits (160), Expect(2) = 2e-28
Identities = 44/107 (41%), Positives = 54/107 (50%), Gaps = 36/107 (33%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDN-------EGYVRDAFL-- 154
VT C H FCK LIDF A++G+VS SCS+ LTVD T +KD +G+ + L
Sbjct: 648 VTSCEHTFCKGCLIDFSASLGRVSCPSCSQLLTVDLTFNKDVVVTKTTIKGFRSSSILNR 707
Query: 155 ---------------------------TAKGIVFSQFTSFLDLIHYS 214
+AK IVFSQFTSFLDLI+YS
Sbjct: 708 IQIENFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDLINYS 754
>ref|XP_004506272.1| PREDICTED: ATP-dependent helicase rhp16-like isoform X1 [Cicer
arietinum]
Length = 888
Score = 85.5 bits (210), Expect(2) = 2e-28
Identities = 43/53 (81%), Positives = 46/53 (86%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K VS VQL GSM + ARDAAIKKFTD+PDCKIFLMSLK GGVALNLTVASH+
Sbjct: 757 KSGVSCVQLNGSMTLGARDAAIKKFTDDPDCKIFLMSLKAGGVALNLTVASHV 809
Score = 66.2 bits (160), Expect(2) = 2e-28
Identities = 44/107 (41%), Positives = 54/107 (50%), Gaps = 36/107 (33%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDN-------EGYVRDAFL-- 154
VT C H FCK LIDF A++G+VS SCS+ LTVD T +KD +G+ + L
Sbjct: 648 VTSCEHTFCKGCLIDFSASLGRVSCPSCSQLLTVDLTFNKDVVVTKTTIKGFRSSSILNR 707
Query: 155 ---------------------------TAKGIVFSQFTSFLDLIHYS 214
+AK IVFSQFTSFLDLI+YS
Sbjct: 708 IQIENFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDLINYS 754
>gb|EXB37878.1| ATP-dependent helicase rhp16 [Morus notabilis]
Length = 837
Score = 82.8 bits (203), Expect(2) = 2e-28
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K + VQLVGSM + ARDAAIKKFT++PDC+IFLMSLK GGVALNLTVASH+
Sbjct: 706 KSGIKCVQLVGSMTLNARDAAIKKFTEDPDCRIFLMSLKAGGVALNLTVASHV 758
Score = 68.9 bits (167), Expect(2) = 2e-28
Identities = 43/109 (39%), Positives = 56/109 (51%), Gaps = 38/109 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDN---------EGYVRDAFL 154
VT C H+FCK+ L+D+ ++G+VS SCSK LTVDFT + D +G+ + L
Sbjct: 595 VTSCEHIFCKACLLDYSDSLGEVSCPSCSKLLTVDFTTNPDTTNKTSKTTVKGFRSSSIL 654
Query: 155 -----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AKGIVFSQFTSFLDLI+YS
Sbjct: 655 NRIELDKFQTSTKIEALREEIRFMVEGDGSAKGIVFSQFTSFLDLINYS 703
>ref|NP_172004.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
gi|332189671|gb|AEE27792.1| Helicase protein with
RING/U-box domain [Arabidopsis thaliana]
Length = 833
Score = 85.9 bits (211), Expect(2) = 5e-28
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
KC VS VQLVGSM MAARD AI KF ++PDC++FLMSLK GGVALNLTVASH+
Sbjct: 702 KCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFLMSLKAGGVALNLTVASHV 754
Score = 64.3 bits (155), Expect(2) = 5e-28
Identities = 42/109 (38%), Positives = 54/109 (49%), Gaps = 38/109 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDNE---------GYVRDAFL 154
VT C HVFCK+ LI F A++G+V+ +CSK LTVD+T D E G+ + L
Sbjct: 591 VTSCAHVFCKACLIGFSASLGKVTCPTCSKLLTVDWTTKADTEHKASKTTLKGFRASSIL 650
Query: 155 -----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AK IVFSQFTSFLDLI+Y+
Sbjct: 651 NRIKLDDFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDLINYT 699
>gb|AAB71467.1| Similar to Saccharomyces RAD16 (gb|X78993) [Arabidopsis thaliana]
Length = 822
Score = 85.9 bits (211), Expect(2) = 5e-28
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
KC VS VQLVGSM MAARD AI KF ++PDC++FLMSLK GGVALNLTVASH+
Sbjct: 768 KCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFLMSLKAGGVALNLTVASHV 820
Score = 64.3 bits (155), Expect(2) = 5e-28
Identities = 42/109 (38%), Positives = 54/109 (49%), Gaps = 38/109 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDNE---------GYVRDAFL 154
VT C HVFCK+ LI F A++G+V+ +CSK LTVD+T D E G+ + L
Sbjct: 657 VTSCAHVFCKACLIGFSASLGKVTCPTCSKLLTVDWTTKADTEHKASKTTLKGFRASSIL 716
Query: 155 -----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AK IVFSQFTSFLDLI+Y+
Sbjct: 717 NRIKLDDFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDLINYT 765
>ref|XP_002892268.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297338110|gb|EFH68527.1| SNF2 domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 843
Score = 85.9 bits (211), Expect(2) = 2e-27
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
KC VS VQLVGSM MAARD AI KF ++PDC++FLMSLK GGVALNLTVASH+
Sbjct: 712 KCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFLMSLKAGGVALNLTVASHV 764
Score = 62.4 bits (150), Expect(2) = 2e-27
Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 38/109 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDNE---------GYVRDAFL 154
VT C HVFCK+ LI F ++G+V+ +CSK LTVD+T D E G+ + L
Sbjct: 601 VTTCAHVFCKACLIGFSTSLGKVTCPTCSKLLTVDWTTKADTEHKASKTTLKGFRASSIL 660
Query: 155 -----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AK IVFSQFTSFLD+I+Y+
Sbjct: 661 NRIKLDDFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDIINYT 709
>ref|XP_004248914.1| PREDICTED: DNA repair protein RAD16-like [Solanum lycopersicum]
Length = 889
Score = 74.3 bits (181), Expect(2) = 3e-27
Identities = 37/53 (69%), Positives = 43/53 (81%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K V VQL GSM M ARD+AI +FT++PDC+IFLMSLK GGVALNLTVAS +
Sbjct: 758 KSGVGCVQLDGSMSMTARDSAITRFTEDPDCRIFLMSLKAGGVALNLTVASQV 810
Score = 73.2 bits (178), Expect(2) = 3e-27
Identities = 46/108 (42%), Positives = 56/108 (51%), Gaps = 37/108 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDNE--------GYVRDAFL- 154
VT CTHVFCKS LIDF A++GQVS SC+K LTV+FT + + G+ + L
Sbjct: 648 VTSCTHVFCKSCLIDFSASVGQVSCPSCAKTLTVEFTANDKGDHKSKATIKGFRSSSILN 707
Query: 155 ----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AK IVFSQFTSFLDLIHY+
Sbjct: 708 RIHLDNFQTSTKIEALREEIRFMIERDGSAKAIVFSQFTSFLDLIHYA 755
>gb|EMJ16163.1| hypothetical protein PRUPE_ppa001451mg [Prunus persica]
Length = 826
Score = 80.5 bits (197), Expect(2) = 3e-27
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +1
Query: 220 KCSVSYVQLVGSMLMAARDAAIKKFTDNPDCKIFLMSLKVGGVALNLTVASHL 378
K + VQLVGSM M+ARD AIK FT++PDC+IFLMSLK GGVALNLTVASH+
Sbjct: 695 KSGIKCVQLVGSMTMSARDNAIKTFTEDPDCRIFLMSLKAGGVALNLTVASHV 747
Score = 67.0 bits (162), Expect(2) = 3e-27
Identities = 43/109 (39%), Positives = 54/109 (49%), Gaps = 38/109 (34%)
Frame = +2
Query: 2 VTLCTHVFCKSFLIDFFANMGQVSYSSCSKPLTVDFTRSKDN---------EGYVRDAFL 154
VT C H FCK+ L DF A+ GQVS +CSK LTVDFT + D +G+ + +
Sbjct: 584 VTTCQHAFCKACLTDFSASFGQVSCPTCSKVLTVDFTTNLDAANQTTKTTIKGFRSSSIM 643
Query: 155 -----------------------------TAKGIVFSQFTSFLDLIHYS 214
+AKGIVFSQFT+FLDLI+YS
Sbjct: 644 NRIQLDNFQTSTKIEALREEIRCMVEKDGSAKGIVFSQFTAFLDLINYS 692