BLASTX nr result
ID: Rauwolfia21_contig00011956
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00011956
(1033 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004237422.1| PREDICTED: DNA-directed RNA polymerase I sub... 127 5e-27
gb|EPS67751.1| hypothetical protein M569_07023 [Genlisea aurea] 113 1e-22
ref|XP_006416439.1| hypothetical protein EUTSA_v10009132mg [Eutr... 83 2e-13
ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thalian... 81 6e-13
ref|XP_006390663.1| hypothetical protein EUTSA_v10019327mg [Eutr... 81 8e-13
ref|XP_002875292.1| transcription factor S-II domain-containing ... 80 1e-12
gb|EOY15075.1| TFIIB zinc-binding protein, putative [Theobroma c... 78 5e-12
ref|XP_004501608.1| PREDICTED: DNA-directed RNA polymerase I sub... 78 7e-12
ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 ... 78 7e-12
ref|XP_006292047.1| hypothetical protein CARUB_v10018251mg [Caps... 77 9e-12
emb|CBI19898.3| unnamed protein product [Vitis vinifera] 77 9e-12
dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare] 77 1e-11
gb|ESW34724.1| hypothetical protein PHAVU_001G175600g [Phaseolus... 76 2e-11
ref|XP_006435209.1| hypothetical protein CICLE_v10003775mg [Citr... 76 2e-11
ref|XP_006473684.1| PREDICTED: DNA-directed RNA polymerase I sub... 75 3e-11
ref|XP_006473683.1| PREDICTED: DNA-directed RNA polymerase I sub... 75 3e-11
ref|XP_006837385.1| hypothetical protein AMTR_s00111p00127690 [A... 75 3e-11
ref|XP_004512027.1| PREDICTED: DNA-directed RNA polymerase I sub... 75 3e-11
ref|XP_002318989.1| transcription factor S-II domain-containing ... 75 6e-11
ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycin... 73 2e-10
>ref|XP_004237422.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like
[Solanum lycopersicum] gi|565396690|ref|XP_006363942.1|
PREDICTED: DNA-directed RNA polymerase I subunit
RPA12-like isoform X1 [Solanum tuberosum]
gi|565396692|ref|XP_006363943.1| PREDICTED: DNA-directed
RNA polymerase I subunit RPA12-like isoform X2 [Solanum
tuberosum]
Length = 121
Score = 127 bits (320), Expect = 5e-27
Identities = 63/89 (70%), Positives = 71/89 (79%)
Frame = -2
Query: 633 FGDLTSDIAGKVIRYTITAEDIQRELGISPSFDDFEVEKESKQMDYNAKCKTCQHVGMSY 454
F +IAG I+YT++AE I+RELGIS SFDD E EKE KQMDYNAKCK CQH+GMSY
Sbjct: 34 FKKRVKEIAGNEIQYTVSAEAIKRELGIS-SFDDLEEEKELKQMDYNAKCKGCQHLGMSY 92
Query: 453 VTMQTRSADEGQTIFYTCPKCGSKQTENS 367
+ Q RSADEGQTIFYTC CG+KQTENS
Sbjct: 93 IARQIRSADEGQTIFYTCLVCGNKQTENS 121
>gb|EPS67751.1| hypothetical protein M569_07023 [Genlisea aurea]
Length = 124
Score = 113 bits (283), Expect = 1e-22
Identities = 54/77 (70%), Positives = 62/77 (80%)
Frame = -2
Query: 597 IRYTITAEDIQRELGISPSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRSADEGQ 418
I Y+IT E ++RELG+S S DD E E+E KQMDYNAKCK CQH+GM+YV Q RSADEGQ
Sbjct: 49 ICYSITPESLRRELGVS-SLDDVEEERELKQMDYNAKCKGCQHLGMAYVARQIRSADEGQ 107
Query: 417 TIFYTCPKCGSKQTENS 367
TIFYTCP C +QTENS
Sbjct: 108 TIFYTCPVCAHRQTENS 124
>ref|XP_006416439.1| hypothetical protein EUTSA_v10009132mg [Eutrema salsugineum]
gi|312281609|dbj|BAJ33670.1| unnamed protein product
[Thellungiella halophila] gi|557094210|gb|ESQ34792.1|
hypothetical protein EUTSA_v10009132mg [Eutrema
salsugineum]
Length = 119
Score = 82.8 bits (203), Expect = 2e-13
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Frame = -2
Query: 615 DIAGKVIRYTITAEDIQRELGIS----PSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVT 448
+I GK I YT++AEDI+RELGIS + +D E+ K K C+ CQH + Y T
Sbjct: 40 EIIGKDIAYTVSAEDIRRELGISLFGEKTQEDAELPKIKKA------CEKCQHPELVYTT 93
Query: 447 MQTRSADEGQTIFYTCPKCGSKQTE 373
QTRSADEGQT +YTCP CG + TE
Sbjct: 94 RQTRSADEGQTTYYTCPNCGHRFTE 118
>ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thaliana]
gi|9279599|dbj|BAB01057.1| unnamed protein product
[Arabidopsis thaliana] gi|21536551|gb|AAM60883.1|
putative RNA polymerase I subunit [Arabidopsis thaliana]
gi|88011125|gb|ABD38906.1| At3g25940 [Arabidopsis
thaliana] gi|332643572|gb|AEE77093.1| TFIIB zinc-binding
protein [Arabidopsis thaliana]
Length = 119
Score = 81.3 bits (199), Expect = 6e-13
Identities = 41/81 (50%), Positives = 52/81 (64%)
Frame = -2
Query: 615 DIAGKVIRYTITAEDIQRELGISPSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTR 436
DI K I YT++AEDI+RELGIS + + E E ++ C+ CQH + Y T QTR
Sbjct: 40 DIIDKEIAYTVSAEDIRRELGISLFGEKTQAEAELPKI--KKACEKCQHPELVYTTRQTR 97
Query: 435 SADEGQTIFYTCPKCGSKQTE 373
SADEGQT +YTCP C + TE
Sbjct: 98 SADEGQTTYYTCPNCAHRFTE 118
>ref|XP_006390663.1| hypothetical protein EUTSA_v10019327mg [Eutrema salsugineum]
gi|557087097|gb|ESQ27949.1| hypothetical protein
EUTSA_v10019327mg [Eutrema salsugineum]
Length = 119
Score = 80.9 bits (198), Expect = 8e-13
Identities = 43/85 (50%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Frame = -2
Query: 615 DIAGKVIRYTITAEDIQRELGIS----PSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVT 448
+I GK I YT++AEDI+RELGIS + +D E+ K K C+ CQH + Y T
Sbjct: 40 EIIGKEIAYTVSAEDIRRELGISLFGEKTQEDAELPKIKKA------CEKCQHPELVYTT 93
Query: 447 MQTRSADEGQTIFYTCPKCGSKQTE 373
QTRSADEGQT +YTCP C + TE
Sbjct: 94 RQTRSADEGQTTYYTCPNCSHRFTE 118
>ref|XP_002875292.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata] gi|297321130|gb|EFH51551.1|
transcription factor S-II domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 119
Score = 80.5 bits (197), Expect = 1e-12
Identities = 41/81 (50%), Positives = 52/81 (64%)
Frame = -2
Query: 615 DIAGKVIRYTITAEDIQRELGISPSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTR 436
+I K I YT+TAEDI+RELGIS + + E E ++ C+ CQH + Y T QTR
Sbjct: 40 EIINKDIAYTVTAEDIRRELGISLFGEKTQEEAELPKI--KKACEKCQHPELVYTTRQTR 97
Query: 435 SADEGQTIFYTCPKCGSKQTE 373
SADEGQT +YTCP C + TE
Sbjct: 98 SADEGQTTYYTCPNCAHRFTE 118
>gb|EOY15075.1| TFIIB zinc-binding protein, putative [Theobroma cacao]
Length = 119
Score = 78.2 bits (191), Expect = 5e-12
Identities = 42/81 (51%), Positives = 50/81 (61%)
Frame = -2
Query: 612 IAGKVIRYTITAEDIQRELGISPSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRS 433
I G+ I YTITAEDI+R+LGIS + + KES + CK C H + Y T Q RS
Sbjct: 41 ILGREIGYTITAEDIRRDLGISHVSEGMKT-KESAAL-IKQTCKKCGHPELEYTTRQMRS 98
Query: 432 ADEGQTIFYTCPKCGSKQTEN 370
ADEGQT+F CP C K TEN
Sbjct: 99 ADEGQTVFLVCPNCKFKDTEN 119
>ref|XP_004501608.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
X1 [Cicer arietinum] gi|502132990|ref|XP_004501609.1|
PREDICTED: DNA-directed RNA polymerase I subunit
RPA12-like isoform X2 [Cicer arietinum]
gi|502132992|ref|XP_004501610.1| PREDICTED: DNA-directed
RNA polymerase I subunit RPA12-like isoform X3 [Cicer
arietinum]
Length = 116
Score = 77.8 bits (190), Expect = 7e-12
Identities = 41/82 (50%), Positives = 51/82 (62%)
Frame = -2
Query: 615 DIAGKVIRYTITAEDIQRELGISPSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTR 436
DI GK I YTI+AEDI+RELGI D E++ + N C+ C H ++ T Q R
Sbjct: 40 DIKGKEISYTISAEDIRRELGI-----DLIEEQKVQLSKVNKTCEKCGHGEATFYTRQMR 94
Query: 435 SADEGQTIFYTCPKCGSKQTEN 370
SADEGQT FYTC +CG + EN
Sbjct: 95 SADEGQTTFYTCTRCGHQFQEN 116
>ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 [Medicago truncatula]
gi|357470681|ref|XP_003605625.1| DNA-directed RNA
polymerase I subunit RPA12 [Medicago truncatula]
gi|355492151|gb|AES73354.1| DNA-directed RNA polymerase
I subunit RPA12 [Medicago truncatula]
gi|355506680|gb|AES87822.1| DNA-directed RNA polymerase
I subunit RPA12 [Medicago truncatula]
Length = 115
Score = 77.8 bits (190), Expect = 7e-12
Identities = 41/82 (50%), Positives = 51/82 (62%)
Frame = -2
Query: 615 DIAGKVIRYTITAEDIQRELGISPSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTR 436
DI GK I YTI+AEDI+RELGI D E++ + N C+ C H ++ T Q R
Sbjct: 39 DIKGKEISYTISAEDIRRELGI-----DLIEEQKVQLSKVNKTCEKCGHGEAAFYTRQMR 93
Query: 435 SADEGQTIFYTCPKCGSKQTEN 370
SADEGQT FYTC +CG + EN
Sbjct: 94 SADEGQTTFYTCTRCGHQFQEN 115
>ref|XP_006292047.1| hypothetical protein CARUB_v10018251mg [Capsella rubella]
gi|482560754|gb|EOA24945.1| hypothetical protein
CARUB_v10018251mg [Capsella rubella]
Length = 119
Score = 77.4 bits (189), Expect = 9e-12
Identities = 42/82 (51%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = -2
Query: 615 DIAGKVIRYTITAEDIQRELGISPSFDDFEVEKESKQMDYNAK-CKTCQHVGMSYVTMQT 439
DI K I Y ++AEDI+RELGIS E ++E +Q+ K C+ CQH + Y T QT
Sbjct: 40 DIIDKDIAYKVSAEDIRRELGISLFG---EKQQEDEQLPKIKKACEKCQHPELVYTTRQT 96
Query: 438 RSADEGQTIFYTCPKCGSKQTE 373
RSADEGQT +YTCP C + TE
Sbjct: 97 RSADEGQTTYYTCPNCAHRFTE 118
>emb|CBI19898.3| unnamed protein product [Vitis vinifera]
Length = 126
Score = 77.4 bits (189), Expect = 9e-12
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = -2
Query: 615 DIAGKVIRYTITAEDIQRELGISP--SFDDFEVEK-ESKQMDYNAKCKTCQH-VGMSYVT 448
DI+G+ IRYT++AEDI+REL I P D E+ E++ +C C+ + Y T
Sbjct: 40 DISGREIRYTVSAEDIRRELNIEPFVKLDGIITEESEAQNAKTKGRCDRCEEDTWLYYYT 99
Query: 447 MQTRSADEGQTIFYTCPKCGSKQTENS 367
Q RSADEGQTIFY C KCG K ++N+
Sbjct: 100 RQLRSADEGQTIFYECTKCGHKWSQNT 126
>dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 125
Score = 77.0 bits (188), Expect = 1e-11
Identities = 42/90 (46%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Frame = -2
Query: 615 DIAGKVIRYTITAEDIQRELGISPSFDDFEVEKESKQMDYNAK-------CKTCQHVGMS 457
DI GK RY +TAEDI+REL I P F V + + +D + C C H +
Sbjct: 40 DIEGKETRYAVTAEDIRRELKIKP----FVVLESAPNLDIVVQRSLTERACPKCNHHELE 95
Query: 456 YVTMQTRSADEGQTIFYTCPKCGSKQTENS 367
Y T Q RSADEGQTIFY CP+CG EN+
Sbjct: 96 YYTKQLRSADEGQTIFYECPECGHAFNENT 125
>gb|ESW34724.1| hypothetical protein PHAVU_001G175600g [Phaseolus vulgaris]
Length = 115
Score = 75.9 bits (185), Expect = 2e-11
Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = -2
Query: 615 DIAGKVIRYTITAEDIQRELGISPSFDDFEVEKESKQMD-YNAKCKTCQHVGMSYVTMQT 439
DI K I YTI AEDI+RELGI +E++ Q+ N KC+ C H ++ T Q
Sbjct: 39 DIRDKEIGYTIYAEDIRRELGIEI------IEEQKVQLSKVNKKCEKCGHDEANFYTRQM 92
Query: 438 RSADEGQTIFYTCPKCGSKQTEN 370
RSADEGQT FYTC +CG + EN
Sbjct: 93 RSADEGQTTFYTCTRCGHQSQEN 115
>ref|XP_006435209.1| hypothetical protein CICLE_v10003775mg [Citrus clementina]
gi|557537331|gb|ESR48449.1| hypothetical protein
CICLE_v10003775mg [Citrus clementina]
Length = 120
Score = 75.9 bits (185), Expect = 2e-11
Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = -2
Query: 615 DIAGKVIRYTITAEDIQRELGISPSFDDFEVEKESKQMD-YNAKCKTCQHVGMSYVTMQT 439
D+A + I Y +TAE+I+RELGIS F+ + +K Q+ C+ CQ+ M Y T QT
Sbjct: 39 DVADREISYAVTAEEIKRELGIS-LFEQPQGDKGETQLSKVKRACEKCQNPEMYYSTRQT 97
Query: 438 RSADEGQTIFYTCPKCGSKQTEN 370
RSADEGQT +Y CP+CG + E+
Sbjct: 98 RSADEGQTTYYICPRCGHRCQES 120
>ref|XP_006473684.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
X2 [Citrus sinensis]
Length = 120
Score = 75.5 bits (184), Expect = 3e-11
Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = -2
Query: 615 DIAGKVIRYTITAEDIQRELGISPSFDDFEVEKESKQMD-YNAKCKTCQHVGMSYVTMQT 439
D+A + I Y +TAE+I+RELGIS F+ + +K Q+ C+ CQ+ M Y T QT
Sbjct: 39 DVADREISYAVTAEEIKRELGIS-LFEQPQGDKGETQLSKVKRACEKCQNPEMYYSTRQT 97
Query: 438 RSADEGQTIFYTCPKCGSKQTEN 370
RSADEGQT +Y CP+CG + E+
Sbjct: 98 RSADEGQTTYYICPRCGYRCQES 120
>ref|XP_006473683.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
X1 [Citrus sinensis]
Length = 139
Score = 75.5 bits (184), Expect = 3e-11
Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = -2
Query: 615 DIAGKVIRYTITAEDIQRELGISPSFDDFEVEKESKQMD-YNAKCKTCQHVGMSYVTMQT 439
D+A + I Y +TAE+I+RELGIS F+ + +K Q+ C+ CQ+ M Y T QT
Sbjct: 58 DVADREISYAVTAEEIKRELGIS-LFEQPQGDKGETQLSKVKRACEKCQNPEMYYSTRQT 116
Query: 438 RSADEGQTIFYTCPKCGSKQTEN 370
RSADEGQT +Y CP+CG + E+
Sbjct: 117 RSADEGQTTYYICPRCGYRCQES 139
>ref|XP_006837385.1| hypothetical protein AMTR_s00111p00127690 [Amborella trichopoda]
gi|548840003|gb|ERN00239.1| hypothetical protein
AMTR_s00111p00127690 [Amborella trichopoda]
Length = 102
Score = 75.5 bits (184), Expect = 3e-11
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Frame = -2
Query: 618 SDIAGKVIRYTITAEDIQRELGISPSF----DDFEVEKESKQMDYNAKCKTCQHVGMSYV 451
S++AG+ I YTITAED++R+L + P D E +K ++ N C C + + Y
Sbjct: 15 SELAGREICYTITAEDLRRDLNLEPFVQLDKDTREEDKGVQRTVVNEPCPKCLNPQLEYH 74
Query: 450 TMQTRSADEGQTIFYTCPKCGSKQTENS 367
T Q RSADEGQT+FY CPKC K + N+
Sbjct: 75 TKQLRSADEGQTVFYDCPKCRHKFSVNT 102
>ref|XP_004512027.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Cicer
arietinum]
Length = 116
Score = 75.5 bits (184), Expect = 3e-11
Identities = 40/81 (49%), Positives = 50/81 (61%)
Frame = -2
Query: 612 IAGKVIRYTITAEDIQRELGISPSFDDFEVEKESKQMDYNAKCKTCQHVGMSYVTMQTRS 433
I GK I YTI+AEDI+RELGI D E++ + N C+ C H ++ T Q RS
Sbjct: 41 IKGKEISYTISAEDIRRELGI-----DLIEEQKVQLSKVNKTCEKCGHGEATFYTRQMRS 95
Query: 432 ADEGQTIFYTCPKCGSKQTEN 370
ADEGQT FYTC +CG + EN
Sbjct: 96 ADEGQTTFYTCTRCGHQFQEN 116
>ref|XP_002318989.1| transcription factor S-II domain-containing family protein [Populus
trichocarpa] gi|222857365|gb|EEE94912.1| transcription
factor S-II domain-containing family protein [Populus
trichocarpa]
Length = 117
Score = 74.7 bits (182), Expect = 6e-11
Identities = 37/88 (42%), Positives = 52/88 (59%)
Frame = -2
Query: 633 FGDLTSDIAGKVIRYTITAEDIQRELGISPSFDDFEVEKESKQMDYNAKCKTCQHVGMSY 454
F D++ + I Y +++ED++R+LGIS FE + E K M+ N KC+ C H + +
Sbjct: 34 FKKSAKDLSEREISYQVSSEDMRRDLGIS----HFEGKMEVKDMEINKKCEKCGHTKLKF 89
Query: 453 VTMQTRSADEGQTIFYTCPKCGSKQTEN 370
T Q RSADEGQT F+ C C TEN
Sbjct: 90 STRQMRSADEGQTTFFHCANCSYTFTEN 117
>ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycine max]
gi|255632466|gb|ACU16583.1| unknown [Glycine max]
Length = 116
Score = 73.2 bits (178), Expect = 2e-10
Identities = 40/85 (47%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Frame = -2
Query: 615 DIAGKVIRYTITAEDIQRELGISPSFDDFEVEKESKQMDYNA---KCKTCQHVGMSYVTM 445
DI K I +TI+ EDI+RELG+ E+ +E M+Y+ KC+ C H +Y T
Sbjct: 39 DICDKEISFTISDEDIRRELGM-------EIIEEHAVMEYSKVSKKCEKCGHGEATYYTR 91
Query: 444 QTRSADEGQTIFYTCPKCGSKQTEN 370
Q RSADEGQT FYTC CG + EN
Sbjct: 92 QMRSADEGQTTFYTCTGCGHQSQEN 116