BLASTX nr result

ID: Rauwolfia21_contig00011657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00011657
         (1464 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006346504.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-07
ref|XP_004230838.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-07
ref|XP_006384483.1| hypothetical protein POPTR_0004s15480g [Popu...    62   8e-07
ref|XP_004292464.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-06

>ref|XP_006346504.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Solanum tuberosum]
          Length = 618

 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 32/41 (78%), Positives = 37/41 (90%), Gaps = 1/41 (2%)
 Frame = +2

Query: 62  GVL-EELLKEMVSKGITPDDSTYISLIEGIGNAEEFLRKKD 181
           GVL EELLKEMVSKGITPDDSTY++LIEGIG+ + FL +KD
Sbjct: 576 GVLAEELLKEMVSKGITPDDSTYLALIEGIGDVDSFLGRKD 616


>ref|XP_004230838.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Solanum lycopersicum]
          Length = 618

 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 32/41 (78%), Positives = 37/41 (90%), Gaps = 1/41 (2%)
 Frame = +2

Query: 62  GVL-EELLKEMVSKGITPDDSTYISLIEGIGNAEEFLRKKD 181
           GVL EELLKEMVSKGITPDDSTY++LIEGIG+ + FL +KD
Sbjct: 576 GVLAEELLKEMVSKGITPDDSTYLALIEGIGDVDSFLGRKD 616


>ref|XP_006384483.1| hypothetical protein POPTR_0004s15480g [Populus trichocarpa]
           gi|550341101|gb|ERP62280.1| hypothetical protein
           POPTR_0004s15480g [Populus trichocarpa]
          Length = 524

 Score = 61.6 bits (148), Expect = 8e-07
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = +2

Query: 71  EELLKEMVSKGITPDDSTYISLIEGIGNAEEFLRKKDP 184
           E+LLKEM+SKGITP+D+TY+SLIEGIGN EEFL   +P
Sbjct: 487 EQLLKEMISKGITPNDNTYLSLIEGIGNVEEFLGISNP 524


>ref|XP_004292464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 623

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +2

Query: 65  VLEELLKEMVSKGITPDDSTYISLIEGIGNAEEFLRK 175
           V +ELLKEMVS+GITPDD+TY  LIEGI N EEFL+K
Sbjct: 584 VAQELLKEMVSRGITPDDNTYYYLIEGIENVEEFLKK 620


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