BLASTX nr result

ID: Rauwolfia21_contig00011630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00011630
         (739 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004242397.1| PREDICTED: uncharacterized protein LOC101246...    91   4e-16
ref|XP_006349305.1| PREDICTED: DNA-directed RNA polymerase III s...    79   1e-12
ref|XP_006352701.1| PREDICTED: DNA-directed RNA polymerase III s...    73   9e-11
gb|EPS63125.1| hypothetical protein M569_11664 [Genlisea aurea]        57   5e-06
emb|CBI36039.3| unnamed protein product [Vitis vinifera]               57   5e-06

>ref|XP_004242397.1| PREDICTED: uncharacterized protein LOC101246067 [Solanum
           lycopersicum]
          Length = 204

 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 45/80 (56%), Positives = 55/80 (68%)
 Frame = +1

Query: 1   DENEASGKTQRAEIERYSDRKSEKTRTKPPLSHFIRMEPDYVPAELAXXXXXXXXXXXXX 180
           DE++ S KT + +IER+SD+KSE+ + KPPL  FIRMEPDYVPAELA             
Sbjct: 65  DESDVSKKT-KMDIERFSDKKSERDKAKPPLDKFIRMEPDYVPAELAEGGRKRRDNTDGM 123

Query: 181 XWTPDADMQKLDIFEKLEQK 240
            WTPD DM KLD+ EKL+QK
Sbjct: 124 RWTPDLDMGKLDLLEKLDQK 143


>ref|XP_006349305.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC7-like
           [Solanum tuberosum]
          Length = 201

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 37/80 (46%), Positives = 53/80 (66%)
 Frame = +1

Query: 1   DENEASGKTQRAEIERYSDRKSEKTRTKPPLSHFIRMEPDYVPAELAXXXXXXXXXXXXX 180
           +E++   KT+  +IER+SDR  E+ ++KPPL+H IRM+  +VPAELA             
Sbjct: 61  EESDVLKKTKGMDIERFSDRSLERDKSKPPLTHSIRMDSAHVPAELAKGGTEDRHAAKRV 120

Query: 181 XWTPDADMQKLDIFEKLEQK 240
            W P++DMQKLD+ EKL+QK
Sbjct: 121 RWNPESDMQKLDLLEKLDQK 140


>ref|XP_006352701.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC7-like
           [Solanum tuberosum]
          Length = 206

 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
 Frame = +1

Query: 1   DENEASGKTQRAEIERYSDRKSEKTRTKPPLSHFIRMEPDYVPAELA-XXXXXXXXXXXX 177
           DE++   KT+  +IER+SD KSE+   + PL HFI+M+ DYVPAELA             
Sbjct: 65  DESDVLKKTKGMDIERFSDSKSERAEPESPLEHFIKMDSDYVPAELAKGGREVRRAPPGG 124

Query: 178 XXWTPDADMQKLDIFEKLEQK 240
             W  + DM+KLD+ EKL+QK
Sbjct: 125 VRWKQEPDMRKLDLLEKLDQK 145


>gb|EPS63125.1| hypothetical protein M569_11664 [Genlisea aurea]
          Length = 197

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = +1

Query: 28  QRAEIERYSDRKS-EKTRTKPPLSHFIRMEPDYVPAELAXXXXXXXXXXXXXXWTPDADM 204
           + ++IERYSDR +      KPPL HFI ++  +VP+ELA              WT D+D 
Sbjct: 74  ENSKIERYSDRNNLPSAAAKPPLWHFIMLDSGHVPSELALGGKRVAKKIR---WTLDSDT 130

Query: 205 QKLDIFEKLEQK 240
            K D+FEKLE+K
Sbjct: 131 TKYDVFEKLEEK 142


>emb|CBI36039.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
 Frame = +1

Query: 22  KTQRAEIERYSDR-KSEKTRTKPPLSHFIRMEPDYVPAELAXXXXXXXXXXXXXXWTPDA 198
           K+Q  +IER+SDR K   T  + PL   +R+  +  P EL               W P++
Sbjct: 123 KSQSTDIERFSDRVKLRTTLKRDPLEQILRLTSNNFPLELVQGMKGATHNKRKVQWNPES 182

Query: 199 DMQKLDIFEKLEQKFQ 246
           DMQKL++FEKLE+K +
Sbjct: 183 DMQKLELFEKLEKKLE 198


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