BLASTX nr result
ID: Rauwolfia21_contig00011434
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00011434
(239 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB99107.1| DNA-directed RNA polymerases I, II, and III subun... 89 5e-16
gb|EOY00528.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao] 87 2e-15
gb|EMT31231.1| DNA-directed RNA polymerases I, II, and III subun... 85 9e-15
ref|XP_006483895.1| PREDICTED: DNA-directed RNA polymerase subun... 84 3e-14
ref|XP_006438333.1| hypothetical protein CICLE_v10033492mg [Citr... 84 3e-14
ref|NP_001148175.1| DNA-directed RNA polymerase II 8.2 kDa polyp... 83 3e-14
gb|ESW08328.1| hypothetical protein PHAVU_009G036800g [Phaseolus... 80 2e-13
ref|XP_006828771.1| hypothetical protein AMTR_s00001p00093860 [A... 80 2e-13
ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, I... 80 2e-13
gb|EMJ27037.1| hypothetical protein PRUPE_ppa014395mg [Prunus pe... 80 2e-13
ref|XP_003522765.1| PREDICTED: DNA-directed RNA polymerase subun... 80 2e-13
ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, I... 80 2e-13
ref|XP_002532739.1| DNA-directed RNA polymerase II, subunit n, p... 80 2e-13
ref|XP_001769186.1| predicted protein [Physcomitrella patens] gi... 80 2e-13
ref|XP_002326311.1| predicted protein [Populus trichocarpa] gi|5... 80 2e-13
gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK221... 80 2e-13
gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptid... 80 2e-13
ref|XP_004977216.1| PREDICTED: DNA-directed RNA polymerases I, I... 80 3e-13
ref|XP_004977215.1| PREDICTED: DNA-directed RNA polymerases I, I... 80 3e-13
ref|XP_004489826.1| PREDICTED: DNA-directed RNA polymerases I, I... 80 3e-13
>gb|EXB99107.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Morus
notabilis]
Length = 220
Score = 89.4 bits (220), Expect = 5e-16
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = +1
Query: 43 TSKDIIYKEKQGERDKERKSRQTRASKMIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGD 222
+S+ +++ +R + R+ + + KMIIPVRCFTCGKVIGNKWD+YLDLLQADY EGD
Sbjct: 91 SSQWLLFPVSGKQRRRSRREKDENSKKMIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGD 150
Query: 223 ALDAL 237
ALDAL
Sbjct: 151 ALDAL 155
>gb|EOY00528.1| RNA polymerases N / 8 kDa subunit [Theobroma cacao]
Length = 113
Score = 87.0 bits (214), Expect = 2e-15
Identities = 40/60 (66%), Positives = 49/60 (81%)
Frame = +1
Query: 58 IYKEKQGERDKERKSRQTRASKMIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
+ K ++ +R + KS++ +MIIPVRCFTCGKVIGNKWD+YLDLLQADY EGDALDAL
Sbjct: 21 VEKARRVKRRELGKSQEQELKRMIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAL 80
>gb|EMT31231.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5
[Aegilops tauschii]
Length = 230
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/42 (92%), Positives = 39/42 (92%)
Frame = +1
Query: 112 RASKMIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
R SKMIIPVRCFTCGKVIGNKWD YLDLLQADY EGDALDAL
Sbjct: 136 RGSKMIIPVRCFTCGKVIGNKWDHYLDLLQADYTEGDALDAL 177
>ref|XP_006483895.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
[Citrus sinensis]
Length = 71
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 124 MIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
MIIPVRCFTCGKVIGNKWD+YLDLLQADYPEGDALDAL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYPEGDALDAL 38
>ref|XP_006438333.1| hypothetical protein CICLE_v10033492mg [Citrus clementina]
gi|557540529|gb|ESR51573.1| hypothetical protein
CICLE_v10033492mg [Citrus clementina]
Length = 105
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +1
Query: 124 MIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
MIIPVRCFTCGKVIGNKWD+YLDLLQADYPEGDALDAL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYPEGDALDAL 38
>ref|NP_001148175.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide [Zea mays]
gi|224030055|gb|ACN34103.1| unknown [Zea mays]
gi|413916302|gb|AFW56234.1| LOW QUALITY PROTEIN:
DNA-directed RNA polymerase II polypeptide [Zea mays]
Length = 242
Score = 83.2 bits (204), Expect = 3e-14
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +1
Query: 115 ASKMIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
A+KMIIPVRCFTCGKVIGNKWD YLDLLQADY EGDALDAL
Sbjct: 169 AAKMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDAL 209
>gb|ESW08328.1| hypothetical protein PHAVU_009G036800g [Phaseolus vulgaris]
Length = 71
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 124 MIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
MIIPVRCFTCGKVIGNKWD+YLDLLQADY EGDALDAL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDAL 38
>ref|XP_006828771.1| hypothetical protein AMTR_s00001p00093860 [Amborella trichopoda]
gi|586757438|ref|XP_006853572.1| hypothetical protein
AMTR_s00032p00243320 [Amborella trichopoda]
gi|548833750|gb|ERM96187.1| hypothetical protein
AMTR_s00001p00093860 [Amborella trichopoda]
gi|548857225|gb|ERN15039.1| hypothetical protein
AMTR_s00032p00243320 [Amborella trichopoda]
Length = 71
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 124 MIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
MIIPVRCFTCGKVIGNKWD+YLDLLQADY EGDALDAL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAL 38
>ref|XP_004297393.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Fragaria vesca subsp. vesca]
Length = 71
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 124 MIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
MIIPVRCFTCGKVIGNKWD+YLDLLQADY EGDALDAL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAL 38
>gb|EMJ27037.1| hypothetical protein PRUPE_ppa014395mg [Prunus persica]
Length = 71
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 124 MIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
MIIPVRCFTCGKVIGNKWD+YLDLLQADY EGDALDAL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAL 38
>ref|XP_003522765.1| PREDICTED: DNA-directed RNA polymerase subunit 10-like protein-like
isoform X1 [Glycine max]
gi|571449916|ref|XP_006578279.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein-like isoform X2
[Glycine max] gi|571449919|ref|XP_006578280.1|
PREDICTED: DNA-directed RNA polymerase subunit 10-like
protein-like isoform X3 [Glycine max]
gi|571449921|ref|XP_006578281.1| PREDICTED: DNA-directed
RNA polymerase subunit 10-like protein-like isoform X4
[Glycine max]
Length = 71
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 124 MIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
MIIPVRCFTCGKVIGNKWD+YLDLLQADY EGDALDAL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDAL 38
>ref|XP_002263065.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5 [Vitis vinifera] gi|297739069|emb|CBI28558.3|
unnamed protein product [Vitis vinifera]
gi|508787490|gb|EOY34746.1| RNA polymerases N / 8 kDa
subunit [Theobroma cacao]
Length = 71
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 124 MIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
MIIPVRCFTCGKVIGNKWD+YLDLLQADY EGDALDAL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAL 38
>ref|XP_002532739.1| DNA-directed RNA polymerase II, subunit n, putative [Ricinus
communis] gi|223527516|gb|EEF29641.1| DNA-directed RNA
polymerase II, subunit n, putative [Ricinus communis]
Length = 76
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 124 MIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
MIIPVRCFTCGKVIGNKWD+YLDLLQADY EGDALDAL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDAL 38
>ref|XP_001769186.1| predicted protein [Physcomitrella patens]
gi|162679612|gb|EDQ66058.1| predicted protein
[Physcomitrella patens]
Length = 73
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 124 MIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
MIIPVRCFTCGKVIGNKWD+YLDLLQADY EGDALDAL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYSEGDALDAL 38
>ref|XP_002326311.1| predicted protein [Populus trichocarpa]
gi|566176261|ref|XP_006381558.1| hypothetical protein
POPTR_0006s13850g [Populus trichocarpa]
gi|118486243|gb|ABK94963.1| unknown [Populus
trichocarpa] gi|550336264|gb|ERP59355.1| hypothetical
protein POPTR_0006s13850g [Populus trichocarpa]
Length = 71
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 124 MIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
MIIPVRCFTCGKVIGNKWD+YLDLLQADY EGDALDAL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAL 38
>gb|ABK20909.1| unknown [Picea sitchensis] gi|116781551|gb|ABK22149.1| unknown
[Picea sitchensis] gi|116789545|gb|ABK25286.1| unknown
[Picea sitchensis]
Length = 71
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 124 MIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
MIIPVRCFTCGKVIGNKWD+YLDLLQADY EGDALDAL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAL 38
>gb|ABF70104.1| DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative [Musa
balbisiana]
Length = 70
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 124 MIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
MIIPVRCFTCGKVIGNKWD+YLDLLQADY EGDALDAL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDAL 38
>ref|XP_004977216.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like isoform X2 [Setaria italica]
Length = 72
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = +1
Query: 124 MIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
MIIPVRCFTCGKVIGNKWD YLDLLQADY EGDALDAL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDQYLDLLQADYTEGDALDAL 38
>ref|XP_004977215.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like isoform X1 [Setaria italica]
Length = 83
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = +1
Query: 124 MIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
MIIPVRCFTCGKVIGNKWD YLDLLQADY EGDALDAL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDQYLDLLQADYTEGDALDAL 38
>ref|XP_004489826.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC5-like [Cicer arietinum]
Length = 71
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = +1
Query: 124 MIIPVRCFTCGKVIGNKWDSYLDLLQADYPEGDALDAL 237
MIIPVRCFTCGKVIGNKWDSYLD LQADY EGDALDAL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDSYLDFLQADYTEGDALDAL 38