BLASTX nr result
ID: Rauwolfia21_contig00011087
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00011087
(214 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY19559.1| T6D22.19, putative [Theobroma cacao] 67 2e-09
ref|XP_006292237.1| hypothetical protein CARUB_v10018444mg, part... 61 3e-09
gb|EOX99846.1| T6D22.19, putative [Theobroma cacao] 65 7e-09
gb|EOX99730.1| Ac-like transposase THELMA13 [Theobroma cacao] 64 3e-08
pir||H85073 probable transposon protein [imported] - Arabidopsis... 61 1e-07
ref|XP_006280333.1| hypothetical protein CARUB_v10026257mg [Caps... 60 2e-07
ref|XP_006279278.1| hypothetical protein CARUB_v100165484mg, par... 59 5e-07
ref|XP_003591130.1| DNA (cytosine-5)-methyltransferase 3B [Medic... 59 5e-07
ref|XP_006279432.1| hypothetical protein CARUB_v10007925mg, part... 59 9e-07
gb|AAD24567.1|AF120335_1 putative transposase [Arabidopsis thali... 55 7e-06
>gb|EOY19559.1| T6D22.19, putative [Theobroma cacao]
Length = 559
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = -1
Query: 166 EFLRSFYDITNLILGSSYPTSDLYFMQV*QIECLLVNNASNKDIVIKEMVARMKV 2
EFL FY+ NLI GSSYPTS+LYFMQV +IE +L N N+D VIK+M RMK+
Sbjct: 328 EFLEPFYETINLISGSSYPTSNLYFMQVWKIESILNENLHNEDEVIKDMSQRMKM 382
>ref|XP_006292237.1| hypothetical protein CARUB_v10018444mg, partial [Capsella rubella]
gi|482560944|gb|EOA25135.1| hypothetical protein
CARUB_v10018444mg, partial [Capsella rubella]
Length = 547
Score = 61.2 bits (147), Expect(2) = 3e-09
Identities = 27/61 (44%), Positives = 43/61 (70%)
Frame = -1
Query: 187 DKGSKMFEFLRSFYDITNLILGSSYPTSDLYFMQV*QIECLLVNNASNKDIVIKEMVARM 8
+K K++ FL FYDIT L G+SYPT++LYF Q+ +IECLL + +++ D+ ++ M M
Sbjct: 285 NKAEKIYTFLEPFYDITKLFSGTSYPTANLYFAQIWKIECLLNSYSNDGDMELQNMANEM 344
Query: 7 K 5
+
Sbjct: 345 R 345
Score = 25.4 bits (54), Expect(2) = 3e-09
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 213 KYCPSLEKWTRGQKCLNF 160
K+CPS E+W + +K F
Sbjct: 276 KFCPSDEEWNKAEKIYTF 293
>gb|EOX99846.1| T6D22.19, putative [Theobroma cacao]
Length = 247
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = -1
Query: 166 EFLRSFYDITNLILGSSYPTSDLYFMQV*QIECLLVNNASNKDIVIKEMVARMKV 2
EFL FY+ TNLI GSSYPTS+LYFMQV +IE +L N+D +IK+M RMK+
Sbjct: 5 EFLEPFYETTNLISGSSYPTSNLYFMQVWKIESILNEYLHNEDEMIKDMSQRMKM 59
>gb|EOX99730.1| Ac-like transposase THELMA13 [Theobroma cacao]
Length = 244
Score = 63.5 bits (153), Expect = 3e-08
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = -1
Query: 157 RSFYDITNLILGSSYPTSDLYFMQV*QIECLLVNNASNKDIVIKEMVARMKV 2
+ FY+ TNLI GSSYPTS+LYFMQV +IE +L N N+D +IK+M RMK+
Sbjct: 121 KPFYETTNLISGSSYPTSNLYFMQVWKIESILNANLHNEDEIIKDMSQRMKM 172
>pir||H85073 probable transposon protein [imported] - Arabidopsis thaliana
gi|5032279|gb|AAD38227.1|AF147264_10 may be a pseudogene
[Arabidopsis thaliana] gi|7267351|emb|CAB81124.1|
putative transposon protein [Arabidopsis thaliana]
Length = 483
Score = 61.2 bits (147), Expect = 1e-07
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = -1
Query: 175 KMFEFLRSFYDITNLILGSSYPTSDLYFMQV*QIECLLVNNASNKDIVIKEMVARMK 5
+M +FL SF ITNLI GS YPTS+LYFMQV + + L N SN+D VI+ M+ MK
Sbjct: 266 QMSDFLESFDQITNLISGSIYPTSNLYFMQVWKFQNWLTVNESNQDEVIRNMIVLMK 322
>ref|XP_006280333.1| hypothetical protein CARUB_v10026257mg [Capsella rubella]
gi|482549037|gb|EOA13231.1| hypothetical protein
CARUB_v10026257mg [Capsella rubella]
Length = 508
Score = 60.1 bits (144), Expect(2) = 2e-07
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = -1
Query: 184 KGSKMFEFLRSFYDITNLILGSSYPTSDLYFMQV*QIECLLVNNASNKDIVIKEMVARMK 5
K + E L+ FY IT L+LG SY TS+LYF+ V +IECLL N + D I++M RM+
Sbjct: 257 KAKNILEILKPFYKITVLMLGRSYSTSNLYFVNVWKIECLLKENERHSDKDIRDMAGRMR 316
Query: 4 V 2
+
Sbjct: 317 I 317
Score = 20.4 bits (41), Expect(2) = 2e-07
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -2
Query: 213 KYCPSLEKWTRGQKCL 166
K+CPS + W + + L
Sbjct: 247 KHCPSNDDWCKAKNIL 262
>ref|XP_006279278.1| hypothetical protein CARUB_v100165484mg, partial [Capsella rubella]
gi|482547957|gb|EOA12176.1| hypothetical protein
CARUB_v100165484mg, partial [Capsella rubella]
Length = 171
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = -1
Query: 205 PIFGKMDKGSKMFEFLRSFYDITNLILGSSYPTSDLYFMQV*QIECLLVNNASNKDIVIK 26
P K +G + EFL+ F +IT + GS+YPTS+LYF Q+ IEC L + + D VI+
Sbjct: 23 PTDAKWVRGKLICEFLKPFDEITKMFSGSTYPTSNLYFKQIWNIECWLRRHEFSSDEVIE 82
Query: 25 EMVARMKV 2
+MV MK+
Sbjct: 83 KMVENMKL 90
>ref|XP_003591130.1| DNA (cytosine-5)-methyltransferase 3B [Medicago truncatula]
gi|355480178|gb|AES61381.1| DNA
(cytosine-5)-methyltransferase 3B [Medicago truncatula]
Length = 722
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = -1
Query: 205 PIFGKMDKGSKMFEFLRSFYDITNLILGSSYPTSDLYFMQV*QIECLLVNNASNKDIVIK 26
P + + M + L+ FY+ITNLI SSYP S+LYF ++ ++ECL+ + +N+D++I+
Sbjct: 577 PTSDEWRRAETMCDILKPFYNITNLICDSSYPPSNLYFGEIWKLECLIRSYLTNEDLLIQ 636
Query: 25 EMVARMK 5
M MK
Sbjct: 637 NMAGSMK 643
>ref|XP_006279432.1| hypothetical protein CARUB_v10007925mg, partial [Capsella rubella]
gi|482548132|gb|EOA12330.1| hypothetical protein
CARUB_v10007925mg, partial [Capsella rubella]
Length = 539
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = -1
Query: 166 EFLRSFYDITNLILGSSYPTSDLYFMQV*QIECLLVNNASNKDIVIKEMVARMK 5
EFL F ITNLI GS+YPT +LYFMQV +I L++N+ N+D VI+ M+ M+
Sbjct: 472 EFLEPFDHITNLISGSTYPTFNLYFMQVWKINEWLISNSENQDEVIRNMIVPMR 525
>gb|AAD24567.1|AF120335_1 putative transposase [Arabidopsis thaliana]
Length = 577
Score = 55.5 bits (132), Expect = 7e-06
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 13/81 (16%)
Frame = -1
Query: 211 VLPIFGKMDKGSKMF-------------EFLRSFYDITNLILGSSYPTSDLYFMQV*QIE 71
VL ++D+G K F + L+ F +IT LI GSSYPT+++YFMQV I+
Sbjct: 276 VLRSLAEVDRGYKSFPSAVEWERAELICDLLKPFAEITKLISGSSYPTANVYFMQVWAIK 335
Query: 70 CLLVNNASNKDIVIKEMVARM 8
C L ++ + D VI+EMV M
Sbjct: 336 CWLGDHDDSHDRVIREMVEDM 356