BLASTX nr result
ID: Rauwolfia21_contig00010926
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00010926
(444 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004512764.1| PREDICTED: replication factor C subunit 3-li... 116 4e-24
ref|XP_004497659.1| PREDICTED: replication factor C subunit 3-li... 116 4e-24
gb|AFK43839.1| unknown [Medicago truncatula] 116 4e-24
gb|ESW23801.1| hypothetical protein PHAVU_004G076500g [Phaseolus... 115 5e-24
ref|XP_002263213.1| PREDICTED: probable replication factor C sub... 115 5e-24
gb|AFK37872.1| unknown [Lotus japonicus] 115 6e-24
ref|XP_006367123.1| PREDICTED: replication factor C subunit 3-li... 115 8e-24
ref|XP_004144654.1| PREDICTED: replication factor C subunit 3-li... 114 1e-23
ref|XP_003524588.1| PREDICTED: replication factor C subunit 3-li... 114 1e-23
gb|EOY10483.1| ATPase family associated with various cellular ac... 114 1e-23
gb|AFK46759.1| unknown [Lotus japonicus] 114 1e-23
ref|XP_004228337.1| PREDICTED: replication factor C subunit 3-li... 114 2e-23
ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycin... 113 2e-23
ref|XP_006394942.1| hypothetical protein EUTSA_v10004490mg [Eutr... 113 3e-23
ref|NP_198126.1| replication factor C subunit 3 [Arabidopsis tha... 113 3e-23
ref|XP_002325862.1| hypothetical protein POPTR_0019s05640g [Popu... 111 9e-23
gb|ADE77654.1| unknown [Picea sitchensis] 111 1e-22
gb|EXB68032.1| Replication factor C subunit 3 [Morus notabilis] 110 2e-22
ref|XP_006288049.1| hypothetical protein CARUB_v10001283mg [Caps... 110 2e-22
gb|EMJ23413.1| hypothetical protein PRUPE_ppa007842mg [Prunus pe... 110 2e-22
>ref|XP_004512764.1| PREDICTED: replication factor C subunit 3-like [Cicer arietinum]
Length = 354
Score = 116 bits (290), Expect = 4e-24
Identities = 58/82 (70%), Positives = 62/82 (75%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LFQVRGKLYELL NCIPPEII E+ +WAAYYEHRMRLGQKAIF
Sbjct: 273 LFQVRGKLYELLINCIPPEIILKRLLYELLRKLDAELKHEICHWAAYYEHRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
H+EAFVAKFMS+YKSFLIATFG
Sbjct: 333 HIEAFVAKFMSVYKSFLIATFG 354
>ref|XP_004497659.1| PREDICTED: replication factor C subunit 3-like [Cicer arietinum]
Length = 354
Score = 116 bits (290), Expect = 4e-24
Identities = 58/82 (70%), Positives = 62/82 (75%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LFQVRGKLYELL NCIPPEII E+ +WAAYYEHRMRLGQKAIF
Sbjct: 273 LFQVRGKLYELLINCIPPEIILKRLLYELLRKLDAELKHEICHWAAYYEHRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
H+EAFVAKFMS+YKSFLIATFG
Sbjct: 333 HIEAFVAKFMSVYKSFLIATFG 354
>gb|AFK43839.1| unknown [Medicago truncatula]
Length = 354
Score = 116 bits (290), Expect = 4e-24
Identities = 58/82 (70%), Positives = 62/82 (75%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LFQVRGKLYELL+NCIPPEII EV +WAAYYEHRMRLGQKAIF
Sbjct: 273 LFQVRGKLYELLTNCIPPEIILKRLLYELLRKLDAELKHEVCHWAAYYEHRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
H+EAFVAKFMS+YKSFLI TFG
Sbjct: 333 HIEAFVAKFMSVYKSFLITTFG 354
>gb|ESW23801.1| hypothetical protein PHAVU_004G076500g [Phaseolus vulgaris]
Length = 354
Score = 115 bits (289), Expect = 5e-24
Identities = 59/82 (71%), Positives = 62/82 (75%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LFQVRGKLY+LL NCIPPEII EV +WAAYYEHRMRLGQKAIF
Sbjct: 273 LFQVRGKLYDLLINCIPPEIILKRLLYELLRKLDAELKHEVCHWAAYYEHRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
H+EAFVAKFMSIYKSFLIATFG
Sbjct: 333 HIEAFVAKFMSIYKSFLIATFG 354
>ref|XP_002263213.1| PREDICTED: probable replication factor C subunit 3 [Vitis vinifera]
gi|296089274|emb|CBI39046.3| unnamed protein product
[Vitis vinifera]
Length = 354
Score = 115 bits (289), Expect = 5e-24
Identities = 59/82 (71%), Positives = 62/82 (75%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LFQVRGKLYELL NCIPPEII EV +WAAYYEHRMRLGQKAIF
Sbjct: 273 LFQVRGKLYELLINCIPPEIILKRLLLELLKKLDAELKHEVCHWAAYYEHRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
H+EAFVAKFMSIYK+FLIATFG
Sbjct: 333 HIEAFVAKFMSIYKAFLIATFG 354
>gb|AFK37872.1| unknown [Lotus japonicus]
Length = 354
Score = 115 bits (288), Expect = 6e-24
Identities = 58/82 (70%), Positives = 62/82 (75%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LFQVRGKLYELL NCIPPE+I EV +WAAYYEHRMRLGQKAIF
Sbjct: 273 LFQVRGKLYELLINCIPPEMILKRLLFELLRKLDAELKHEVCHWAAYYEHRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
H+EAFVAKFMS+YKSFLIATFG
Sbjct: 333 HIEAFVAKFMSVYKSFLIATFG 354
>ref|XP_006367123.1| PREDICTED: replication factor C subunit 3-like isoform X1 [Solanum
tuberosum]
Length = 354
Score = 115 bits (287), Expect = 8e-24
Identities = 59/82 (71%), Positives = 63/82 (76%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LF+VRGKLYELL+NCIPPEII EVS WAA+YEHRMRLGQKAIF
Sbjct: 273 LFEVRGKLYELLTNCIPPEIILKRLLFELLKKLDSELKHEVSNWAAHYEHRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
HLEAFVAKFMSIYKSFLI+TFG
Sbjct: 333 HLEAFVAKFMSIYKSFLISTFG 354
>ref|XP_004144654.1| PREDICTED: replication factor C subunit 3-like [Cucumis sativus]
gi|449521275|ref|XP_004167655.1| PREDICTED: replication
factor C subunit 3-like [Cucumis sativus]
Length = 354
Score = 114 bits (286), Expect = 1e-23
Identities = 58/82 (70%), Positives = 62/82 (75%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LFQVRGKLYELL NCIPPEII EV +WAAYYEHRMRLGQKAIF
Sbjct: 273 LFQVRGKLYELLVNCIPPEIILKRLLYELLKKLDAELKHEVCHWAAYYEHRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
H+EAFVAKFMSIYK+FLI+TFG
Sbjct: 333 HIEAFVAKFMSIYKTFLISTFG 354
>ref|XP_003524588.1| PREDICTED: replication factor C subunit 3-like isoform X1 [Glycine
max]
Length = 354
Score = 114 bits (286), Expect = 1e-23
Identities = 59/82 (71%), Positives = 62/82 (75%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LFQVRGKLYELL NCIPPEII EV +WAAYYE+RMRLGQKAIF
Sbjct: 273 LFQVRGKLYELLINCIPPEIILKRLLYELLRKLDAELKHEVCHWAAYYEYRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
H+EAFVAKFMSIYKSFLIATFG
Sbjct: 333 HIEAFVAKFMSIYKSFLIATFG 354
>gb|EOY10483.1| ATPase family associated with various cellular activities (AAA)
isoform 1 [Theobroma cacao]
Length = 354
Score = 114 bits (285), Expect = 1e-23
Identities = 57/82 (69%), Positives = 62/82 (75%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LFQVRGK+YELL NCIPPEII E+ +WAAYYEHRMRLGQKAIF
Sbjct: 273 LFQVRGKVYELLINCIPPEIILKRLLHELLKKLDAELKHEICHWAAYYEHRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
H+EAFVAKFMSIYK+FLIATFG
Sbjct: 333 HIEAFVAKFMSIYKAFLIATFG 354
>gb|AFK46759.1| unknown [Lotus japonicus]
Length = 201
Score = 114 bits (285), Expect = 1e-23
Identities = 58/82 (70%), Positives = 61/82 (74%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LFQVRGKLYELL NCIPPE+I EV WAAYYEHRMRLGQKAIF
Sbjct: 120 LFQVRGKLYELLINCIPPEMILKRLLFELLRKLDAELKHEVCLWAAYYEHRMRLGQKAIF 179
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
H+EAFVAKFMS+YKSFLIATFG
Sbjct: 180 HIEAFVAKFMSVYKSFLIATFG 201
>ref|XP_004228337.1| PREDICTED: replication factor C subunit 3-like [Solanum
lycopersicum]
Length = 354
Score = 114 bits (284), Expect = 2e-23
Identities = 58/82 (70%), Positives = 63/82 (76%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LF+VRGKLYELL+NCIPPEII EV+ WAA+YEHRMRLGQKAIF
Sbjct: 273 LFEVRGKLYELLTNCIPPEIILKRLLFELLKKLDSELKHEVTNWAAHYEHRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
HLEAFVAKFMSIYKSFLI+TFG
Sbjct: 333 HLEAFVAKFMSIYKSFLISTFG 354
>ref|NP_001241064.1| uncharacterized protein LOC100818329 [Glycine max]
gi|255645652|gb|ACU23320.1| unknown [Glycine max]
Length = 354
Score = 113 bits (283), Expect = 2e-23
Identities = 58/82 (70%), Positives = 62/82 (75%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LFQVRGKLYELL NCIPPEII EV +WAAYYE+RMRLGQKAIF
Sbjct: 273 LFQVRGKLYELLINCIPPEIILKRLLYELLRKLDAELKHEVCHWAAYYEYRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
H+EAFVAKFMSIYKSFLI+TFG
Sbjct: 333 HIEAFVAKFMSIYKSFLISTFG 354
>ref|XP_006394942.1| hypothetical protein EUTSA_v10004490mg [Eutrema salsugineum]
gi|557091581|gb|ESQ32228.1| hypothetical protein
EUTSA_v10004490mg [Eutrema salsugineum]
Length = 354
Score = 113 bits (282), Expect = 3e-23
Identities = 56/82 (68%), Positives = 62/82 (75%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LFQVRGK+YELL NCIPPE+I EV +WAAYYEHRMRLGQKAIF
Sbjct: 273 LFQVRGKVYELLVNCIPPEVIMKRLLHELLKKLDSELKLEVCHWAAYYEHRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
H+EAFVAKFMSIYK+FLI+TFG
Sbjct: 333 HIEAFVAKFMSIYKNFLISTFG 354
>ref|NP_198126.1| replication factor C subunit 3 [Arabidopsis thaliana]
gi|75331114|sp|Q8VXX4.1|RFC3_ARATH RecName:
Full=Replication factor C subunit 3; Short=AtRFC3;
AltName: Full=Activator 1 subunit 3; AltName:
Full=Protein EMBRYO DEFECTIVE 161; AltName: Full=Protein
EMBRYO DEFECTIVE 251; AltName: Full=Protein EMBRYO
DEFECTIVE 2775 gi|18389268|gb|AAL67077.1| putative
replication factor C [Arabidopsis thaliana]
gi|20259637|gb|AAM14175.1| putative replication factor C
[Arabidopsis thaliana] gi|332006337|gb|AED93720.1|
protein embryo defective 161 [Arabidopsis thaliana]
Length = 354
Score = 113 bits (282), Expect = 3e-23
Identities = 56/82 (68%), Positives = 62/82 (75%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LFQVRGK+YELL NCIPPE+I EV +WAAYYEHRMRLGQKAIF
Sbjct: 273 LFQVRGKVYELLVNCIPPEVILKRLLHELLKKLDSELKLEVCHWAAYYEHRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
H+EAFVAKFMSIYK+FLI+TFG
Sbjct: 333 HIEAFVAKFMSIYKNFLISTFG 354
>ref|XP_002325862.1| hypothetical protein POPTR_0019s05640g [Populus trichocarpa]
gi|222862737|gb|EEF00244.1| hypothetical protein
POPTR_0019s05640g [Populus trichocarpa]
Length = 353
Score = 111 bits (278), Expect = 9e-23
Identities = 58/82 (70%), Positives = 61/82 (74%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LFQVRGKLYELL NCIPPEII V +WAAYYEHRMR+GQKAIF
Sbjct: 273 LFQVRGKLYELLINCIPPEIILKLLSELLKKLDEELKHE-VCHWAAYYEHRMRMGQKAIF 331
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
HLEAFVAKFMSIYK+FLIATFG
Sbjct: 332 HLEAFVAKFMSIYKAFLIATFG 353
>gb|ADE77654.1| unknown [Picea sitchensis]
Length = 354
Score = 111 bits (277), Expect = 1e-22
Identities = 54/82 (65%), Positives = 60/82 (73%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
L+ VRGK+YELL NCIPPE++ EV +WAAYYEHRMRLGQKAIF
Sbjct: 273 LYMVRGKIYELLVNCIPPEVVLKRLLFELMKKLDSELKHEVCHWAAYYEHRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
HLEAF+AKFMSIYK FLIATFG
Sbjct: 333 HLEAFIAKFMSIYKKFLIATFG 354
>gb|EXB68032.1| Replication factor C subunit 3 [Morus notabilis]
Length = 354
Score = 110 bits (275), Expect = 2e-22
Identities = 57/82 (69%), Positives = 60/82 (73%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
L+QVR KLYELL NCIPPEII EV +WAAYYEHRMRLGQKAIF
Sbjct: 273 LYQVRHKLYELLVNCIPPEIILKRLLFELLKKLDAELKHEVCHWAAYYEHRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
HLEAFVAKFMSIYK+FLIA FG
Sbjct: 333 HLEAFVAKFMSIYKAFLIAAFG 354
>ref|XP_006288049.1| hypothetical protein CARUB_v10001283mg [Capsella rubella]
gi|482556755|gb|EOA20947.1| hypothetical protein
CARUB_v10001283mg [Capsella rubella]
Length = 354
Score = 110 bits (275), Expect = 2e-22
Identities = 55/82 (67%), Positives = 61/82 (74%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
LF VRGK+YELL NCIPPE+I EV +WAAYYEHRMRLGQKAIF
Sbjct: 273 LFLVRGKVYELLVNCIPPEVILKKLLHELLKKLDSELKLEVCHWAAYYEHRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
H+EAFVAKFMSIYK+FLI+TFG
Sbjct: 333 HIEAFVAKFMSIYKNFLISTFG 354
>gb|EMJ23413.1| hypothetical protein PRUPE_ppa007842mg [Prunus persica]
Length = 354
Score = 110 bits (275), Expect = 2e-22
Identities = 57/82 (69%), Positives = 60/82 (73%)
Frame = -3
Query: 442 LFQVRGKLYELLSNCIPPEIIXXXXXXXXXXXXXXXXXXEVSYWAAYYEHRMRLGQKAIF 263
L+QVR KLYELL NCIPPEII EV +WAAYYEHRMRLGQKAIF
Sbjct: 273 LYQVRQKLYELLLNCIPPEIILKRLLFELLKKLDAELKHEVCHWAAYYEHRMRLGQKAIF 332
Query: 262 HLEAFVAKFMSIYKSFLIATFG 197
HLEAFVAKFMSIYK+FLIA FG
Sbjct: 333 HLEAFVAKFMSIYKAFLIAAFG 354