BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00010868
         (578 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006426150.1| hypothetical protein CICLE_v10025015mg [Citr...   265   8e-69
gb|EOX91779.1| Pentatricopeptide repeat (PPR) superfamily protei...   261   1e-67
gb|EMJ09350.1| hypothetical protein PRUPE_ppa022107mg [Prunus pe...   261   1e-67
ref|XP_006466415.1| PREDICTED: pentatricopeptide repeat-containi...   258   8e-67
ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi...   252   6e-65
emb|CBI29560.3| unnamed protein product [Vitis vinifera]              252   6e-65
emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]   252   6e-65
ref|XP_006358483.1| PREDICTED: pentatricopeptide repeat-containi...   251   1e-64
gb|EXB78258.1| hypothetical protein L484_007776 [Morus notabilis]     250   2e-64
ref|XP_004230390.1| PREDICTED: pentatricopeptide repeat-containi...   249   3e-64
ref|XP_004288283.1| PREDICTED: pentatricopeptide repeat-containi...   245   5e-63
ref|NP_190540.1| pentatricopeptide repeat-containing protein [Ar...   244   9e-63
ref|XP_006292229.1| hypothetical protein CARUB_v10018435mg [Caps...   243   2e-62
ref|XP_006404111.1| hypothetical protein EUTSA_v10010157mg [Eutr...   243   3e-62
ref|XP_002875992.1| pentatricopeptide repeat-containing protein ...   242   6e-62
ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containi...   240   2e-61
ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   237   1e-60
ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containi...   235   7e-60
ref|XP_002530602.1| pentatricopeptide repeat-containing protein,...   234   9e-60
ref|XP_002320672.2| pentatricopeptide repeat-containing family p...   231   1e-58

>ref|XP_006426150.1| hypothetical protein CICLE_v10025015mg [Citrus clementina]
           gi|557528140|gb|ESR39390.1| hypothetical protein
           CICLE_v10025015mg [Citrus clementina]
          Length = 718

 Score =  265 bits (676), Expect = 8e-69
 Identities = 122/191 (63%), Positives = 148/191 (77%)
 Frame = +3

Query: 6   LVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAY 185
           L++QLHCLA+  GF  YASVNN L+TCYS+NGFLDEAKRVFY M E KDEVSWNS++VAY
Sbjct: 156 LIKQLHCLAIYCGFDHYASVNNSLLTCYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 215

Query: 186 GQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENP 365
           GQHREG  AL L+Q+MV   L +DMY            +DL+GG+QFHA LIK GFH+N 
Sbjct: 216 GQHREGLEALQLFQEMVSLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLIKSGFHQNS 275

Query: 366 HVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQMQ 545
           H+GSGLIDLYAKC G M  C +VF EIP+PDLV+WNTMISG+SQ  E+S++AL  F+++ 
Sbjct: 276 HIGSGLIDLYAKCSGDMRDCMKVFEEIPQPDLVLWNTMISGYSQKEEYSDQALGCFKKLN 335

Query: 546 VAGHHPDDCSF 578
             G+HPDDCSF
Sbjct: 336 RVGYHPDDCSF 346



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 5/191 (2%)
 Frame = +3

Query: 6   LVRQLHCLAVVGGFHSYA-SVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVA 182
           L +Q+H L +     S   SVNN LV  YSK G L++A+R+F  MPE  + VS NS+I  
Sbjct: 360 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARRLFDRMPE-HNTVSLNSMIAG 418

Query: 183 YGQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKM-GFHE 359
           Y QH  G  AL L++ M+  N+                   +  G ++ + +  M GF  
Sbjct: 419 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 478

Query: 360 NPHVGSGLIDLYAKCRGSMLACKQVFSEIP-EPDLVIWNTMISGFSQ--NAEFSEEALAW 530
                S +IDL  +  G +   +++   +P  P  + W +++       N + + +A   
Sbjct: 479 EGEHYSCMIDLLGRA-GKLTDAERLIEAMPFNPGSIGWGSLLRACRTHGNMDLALKAANH 537

Query: 531 FRQMQVAGHHP 563
           F Q++ +   P
Sbjct: 538 FLQLEPSNAVP 548



 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 1/159 (0%)
 Frame = +3

Query: 69  NILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYGQHREGANALVLYQDMVHRNL 248
           N+L+  Y++   +  A+++F  +P+  D VS+N++I AY    +  +AL L++DM  R  
Sbjct: 78  NVLLAAYARQLRIASARQLFDQIPQ-PDLVSYNTLISAYADCGDTESALSLFKDM--REK 134

Query: 249 KVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENPHVGSGLIDLYAKCRGSMLACK 428
           + D              ++L    Q H   I  GF     V + L+  Y++  G +   K
Sbjct: 135 RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTCYSR-NGFLDEAK 193

Query: 429 QVFSEIPE-PDLVIWNTMISGFSQNAEFSEEALAWFRQM 542
           +VF E+ E  D V WN+M+  + Q+ E   EAL  F++M
Sbjct: 194 RVFYEMGEIKDEVSWNSMVVAYGQHRE-GLEALQLFQEM 231


>gb|EOX91779.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 718

 Score =  261 bits (666), Expect = 1e-67
 Identities = 123/191 (64%), Positives = 147/191 (76%)
 Frame = +3

Query: 6   LVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAY 185
           L+RQLHC  V  GFHSYASVNN L++CYSK G L+EAKRVFYGM E KDEVSWNS+IVAY
Sbjct: 156 LLRQLHCFLVFCGFHSYASVNNALLSCYSKEGLLEEAKRVFYGMGEGKDEVSWNSMIVAY 215

Query: 186 GQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENP 365
           GQH+EGA AL L+Q+MV   L VDM+            +DLLGG+QFHA LIK GFH+N 
Sbjct: 216 GQHKEGAKALALFQEMVRIGLVVDMFTLASVLTAFTSLEDLLGGLQFHAMLIKTGFHQNA 275

Query: 366 HVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQMQ 545
           HVGSGLIDLY+KC G M  C++VF E+  PDLV+WNT+ISG+S N E +EEAL  F++M+
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFDEVSGPDLVLWNTVISGYSLNEELAEEALECFQEMR 335

Query: 546 VAGHHPDDCSF 578
             G+HPDDCSF
Sbjct: 336 CVGYHPDDCSF 346



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
 Frame = +3

Query: 15  QLHCLAVVGGFHSYASVNNILVTCYSK-NGFLDEAKRVFYGMPEFKDEVSWNSIIVAYGQ 191
           Q H + +  GFH  A V + L+  YSK  G + + ++VF  +    D V WN++I  Y  
Sbjct: 261 QFHAMLIKTGFHQNAHVGSGLIDLYSKCGGGMSDCRKVFDEVSG-PDLVLWNTVISGYSL 319

Query: 192 HREGAN-ALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENPH 368
           + E A  AL  +Q+M       D                   G Q HA  IK   H    
Sbjct: 320 NEELAEEALECFQEMRCVGYHPDDCSFVNVISACSNLSSPSQGRQIHALAIKSETHNRIQ 379

Query: 369 VGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQMQV 548
           V + L+ +Y+KC G++   + +F  +PE + V  N+MI+G++++     E+L  F QM  
Sbjct: 380 VNNALVAMYSKC-GNLHDARWLFDRMPEHNTVSLNSMIAGYAEHG-IGMESLLLFEQMLE 437

Query: 549 AGHHPDDCSF 578
               P   +F
Sbjct: 438 RNISPTSVTF 447



 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
 Frame = +3

Query: 12  RQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYGQ 191
           RQ+H LA+    H+   VNN LV  YSK G L +A+ +F  MPE  + VS NS+I  Y +
Sbjct: 363 RQIHALAIKSETHNRIQVNNALVAMYSKCGNLHDARWLFDRMPE-HNTVSLNSMIAGYAE 421

Query: 192 HREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENPHV 371
           H  G  +L+L++ M+ RN+                   L  G Q +  ++K  F   P V
Sbjct: 422 HGIGMESLLLFEQMLERNISPTSVTFISVLSACAHTGKLEEG-QKYFNIMKEKFGIEPEV 480

Query: 372 G--SGLIDLYAKCRGSMLACKQVFSEIP-EPDLVIWNTMIS 485
              S +IDL  +  G +   +++   +P  P  + W  ++S
Sbjct: 481 EHYSCMIDLLGRA-GKLSEAERLIETMPFSPGSIGWAALLS 520


>gb|EMJ09350.1| hypothetical protein PRUPE_ppa022107mg [Prunus persica]
          Length = 720

 Score =  261 bits (666), Expect = 1e-67
 Identities = 129/192 (67%), Positives = 148/192 (77%), Gaps = 1/192 (0%)
 Frame = +3

Query: 6   LVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAY 185
           L+RQLH +AV GGF SY SVNN LVT YSKNGFL EAKRVFY M E +DEVSWNS+IVAY
Sbjct: 156 LIRQLHSVAVSGGFDSYVSVNNALVTYYSKNGFLGEAKRVFYVMGEMRDEVSWNSMIVAY 215

Query: 186 GQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENP 365
           GQHR+G  AL L+Q+MV   LKVDM+            +DLLGG+QFHA+LIK GFH+N 
Sbjct: 216 GQHRQGLRALALFQEMVRMGLKVDMFTLASVLTAFTCVEDLLGGLQFHAKLIKTGFHQNS 275

Query: 366 HVGSGLIDLYAKC-RGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQM 542
           HVGSGLIDLY+KC  G M  C+++F EIP PDLV+WNTMISG+SQN EFSE+AL  FRQM
Sbjct: 276 HVGSGLIDLYSKCAAGGMSDCRKLFEEIPYPDLVLWNTMISGYSQNDEFSEDALDCFRQM 335

Query: 543 QVAGHHPDDCSF 578
           Q  GH  DDCSF
Sbjct: 336 QRVGHCADDCSF 347



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 6/190 (3%)
 Frame = +3

Query: 12  RQLHCLAVVGGFHSY-ASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYG 188
           +Q+H LA+     S   SVNN LV  YSK G L +A+R+F  MPE  + VS NS+I  Y 
Sbjct: 364 KQIHALAIKSDIPSNKVSVNNALVAMYSKCGNLHDARRLFDRMPE-HNTVSLNSMIAGYA 422

Query: 189 QHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENPH 368
           QH  G  +L L++ M+  ++                   +  G Q +  ++K  F   P 
Sbjct: 423 QHGIGVESLRLFEHMLVMDIVPSSITFISVLSACAHTGKVEEG-QKYFNVMKEKFKIEPE 481

Query: 369 VG--SGLIDLYAKCRGSMLACKQVFSEIP-EPDLVIWNTMISGFSQ--NAEFSEEALAWF 533
               S +IDL  +  G +   +++   +P  P  V W T++       N E + +A   F
Sbjct: 482 AEHYSCMIDLLGRA-GKLDEAERLIETMPFNPGSVGWATLLGACRTHGNIELAVKAANQF 540

Query: 534 RQMQVAGHHP 563
            Q+  +   P
Sbjct: 541 LQLDPSNAAP 550


>ref|XP_006466415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Citrus sinensis]
          Length = 718

 Score =  258 bits (659), Expect = 8e-67
 Identities = 120/191 (62%), Positives = 146/191 (76%)
 Frame = +3

Query: 6   LVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAY 185
           L++QLHCLA+  GF  YASVNN L+T YS+NGFLDEAKRVFY M E KDEVSWNS++VAY
Sbjct: 156 LIKQLHCLAIYCGFDHYASVNNSLLTYYSRNGFLDEAKRVFYEMGEIKDEVSWNSMVVAY 215

Query: 186 GQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENP 365
           GQHREG  AL L+Q+MV   L +DMY            +DL+GG+QFHA L+K GFH+N 
Sbjct: 216 GQHREGLEALQLFQEMVRLQLGLDMYTLASILTAFTSLEDLVGGLQFHAHLVKSGFHQNS 275

Query: 366 HVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQMQ 545
           H+GSGLIDLYAKC G M  C +VF EI +PDLV+WNTMISG+SQ  E+SE+AL  F+++ 
Sbjct: 276 HIGSGLIDLYAKCSGDMRDCMKVFEEILQPDLVLWNTMISGYSQKEEYSEQALGCFKKLN 335

Query: 546 VAGHHPDDCSF 578
             G+HPDDCSF
Sbjct: 336 QVGYHPDDCSF 346



 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 5/191 (2%)
 Frame = +3

Query: 6   LVRQLHCLAVVGGFHSYA-SVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVA 182
           L +Q+H L +     S   SVNN LV  YSK G L++A+++F  MPE  + VS NS+I  
Sbjct: 360 LGKQIHALTIKIEIRSNRISVNNALVAMYSKCGNLEDARQLFDRMPE-HNTVSLNSMIAG 418

Query: 183 YGQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKM-GFHE 359
           Y QH  G  AL L++ M+  N+                   +  G ++ + +  M GF  
Sbjct: 419 YAQHGIGMEALRLFEWMLETNIPPTNITFVSVLSACAHTGKVAEGQKYFSMMKDMFGFEP 478

Query: 360 NPHVGSGLIDLYAKCRGSMLACKQVFSEIP-EPDLVIWNTMISGFSQ--NAEFSEEALAW 530
                S +IDL  +  G +   +++   +P  P  + W +++       N + + +A   
Sbjct: 479 EGEHYSCMIDLLGRA-GKLTDAERLIEAMPFNPGSIGWGSLLRACRTHGNMDLAVKAANQ 537

Query: 531 FRQMQVAGHHP 563
           F Q++ +   P
Sbjct: 538 FLQLEPSNAVP 548



 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 1/159 (0%)
 Frame = +3

Query: 69  NILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYGQHREGANALVLYQDMVHRNL 248
           N+L+  Y++   +  A+++F  +P+  D VS+N++I AY    +  +AL L++DM  R  
Sbjct: 78  NVLLAAYARQLRIASARQLFDQIPQ-PDLVSYNTLISAYADCGDTESALSLFKDM--REK 134

Query: 249 KVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENPHVGSGLIDLYAKCRGSMLACK 428
           + D              ++L    Q H   I  GF     V + L+  Y++  G +   K
Sbjct: 135 RFDTDGFTLSGLITASSNNLCLIKQLHCLAIYCGFDHYASVNNSLLTYYSR-NGFLDEAK 193

Query: 429 QVFSEIPE-PDLVIWNTMISGFSQNAEFSEEALAWFRQM 542
           +VF E+ E  D V WN+M+  + Q+ E   EAL  F++M
Sbjct: 194 RVFYEMGEIKDEVSWNSMVVAYGQHRE-GLEALQLFQEM 231


>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  252 bits (643), Expect = 6e-65
 Identities = 121/191 (63%), Positives = 144/191 (75%)
 Frame = +3

Query: 6   LVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAY 185
           L+ QLH +AV  GF SY SVNN L+T Y KNG LD+AKRVFYGM   +DEVSWNS+IVAY
Sbjct: 156 LIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAY 215

Query: 186 GQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENP 365
           GQH+EG+ AL L+Q+MV R L VDM+            +DL GG+QFH QLIK GFH+N 
Sbjct: 216 GQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS 275

Query: 366 HVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQMQ 545
           HVGSGLIDLY+KC G M  C++VF EI EPDLV+WNTM+SG+SQN EF E+AL  FRQMQ
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQ 335

Query: 546 VAGHHPDDCSF 578
             G+ P+DCSF
Sbjct: 336 GIGYRPNDCSF 346


>emb|CBI29560.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  252 bits (643), Expect = 6e-65
 Identities = 121/191 (63%), Positives = 144/191 (75%)
 Frame = +3

Query: 6   LVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAY 185
           L+ QLH +AV  GF SY SVNN L+T Y KNG LD+AKRVFYGM   +DEVSWNS+IVAY
Sbjct: 156 LIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAY 215

Query: 186 GQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENP 365
           GQH+EG+ AL L+Q+MV R L VDM+            +DL GG+QFH QLIK GFH+N 
Sbjct: 216 GQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS 275

Query: 366 HVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQMQ 545
           HVGSGLIDLY+KC G M  C++VF EI EPDLV+WNTM+SG+SQN EF E+AL  FRQMQ
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQ 335

Query: 546 VAGHHPDDCSF 578
             G+ P+DCSF
Sbjct: 336 GIGYRPNDCSF 346


>emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  252 bits (643), Expect = 6e-65
 Identities = 121/191 (63%), Positives = 144/191 (75%)
 Frame = +3

Query: 6   LVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAY 185
           L+ QLH +AV  GF SY SVNN L+T Y KNG LD+AKRVFYGM   +DEVSWNS+IVAY
Sbjct: 156 LIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAY 215

Query: 186 GQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENP 365
           GQH+EG+ AL L+Q+MV R L VDM+            +DL GG+QFH QLIK GFH+N 
Sbjct: 216 GQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNS 275

Query: 366 HVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQMQ 545
           HVGSGLIDLY+KC G M  C++VF EI EPDLV+WNTM+SG+SQN EF E+AL  FRQMQ
Sbjct: 276 HVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQ 335

Query: 546 VAGHHPDDCSF 578
             G+ P+DCSF
Sbjct: 336 GIGYRPNDCSF 346


>ref|XP_006358483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Solanum tuberosum]
          Length = 720

 Score =  251 bits (640), Expect = 1e-64
 Identities = 121/192 (63%), Positives = 145/192 (75%)
 Frame = +3

Query: 3   DLVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVA 182
           D + QLH L++  G  SY SVNN L+T YSKNG LD A+ VF  M E KDEVSWNS+IVA
Sbjct: 157 DFITQLHSLSISAGLDSYTSVNNTLITYYSKNGHLDYAREVFASMGEIKDEVSWNSMIVA 216

Query: 183 YGQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHEN 362
           YGQHREG  AL LY++M  R+L +DM+            +DL GG+QFHA+LI+MGFHEN
Sbjct: 217 YGQHREGIKALALYKEMELRDLYLDMFTLASVLTALTSMEDLRGGLQFHARLIRMGFHEN 276

Query: 363 PHVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQM 542
           PHVGSGLIDLY+KC G +  CK+VF EIP PDLV+WNTMISG+SQ ++  EEA+A FRQM
Sbjct: 277 PHVGSGLIDLYSKCSGGISECKKVFQEIPYPDLVLWNTMISGYSQ-SDLCEEAVACFRQM 335

Query: 543 QVAGHHPDDCSF 578
           Q+AGH PDDCSF
Sbjct: 336 QLAGHQPDDCSF 347



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
 Frame = +3

Query: 15  QLHCLAVVGGFHSYASVNNILVTCYSK-NGFLDEAKRVFYGMPEFKDEVSWNSIIVAYGQ 191
           Q H   +  GFH    V + L+  YSK +G + E K+VF  +P + D V WN++I  Y Q
Sbjct: 263 QFHARLIRMGFHENPHVGSGLIDLYSKCSGGISECKKVFQEIP-YPDLVLWNTMISGYSQ 321

Query: 192 HREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENP-H 368
                 A+  ++ M     + D                   G Q H+  IK     N   
Sbjct: 322 SDLCEEAVACFRQMQLAGHQPDDCSFVCVISASSNLSSPSQGKQIHSLAIKSSISSNRIS 381

Query: 369 VGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEAL--AWFRQM 542
           V + LI +Y+KC GS+   + +F  +PE + V  N+MI+G++Q+   +E  L  AW  + 
Sbjct: 382 VNNALIAMYSKC-GSLQDARLLFDRMPEHNAVTLNSMIAGYAQHGHGAESLLLFAWMLER 440

Query: 543 QV 548
            +
Sbjct: 441 NI 442



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = +3

Query: 12  RQLHCLAVVGGFHSYA-SVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYG 188
           +Q+H LA+     S   SVNN L+  YSK G L +A+ +F  MPE  + V+ NS+I  Y 
Sbjct: 364 KQIHSLAIKSSISSNRISVNNALIAMYSKCGSLQDARLLFDRMPEH-NAVTLNSMIAGYA 422

Query: 189 QHREGANALVLYQDMVHRNL 248
           QH  GA +L+L+  M+ RN+
Sbjct: 423 QHGHGAESLLLFAWMLERNI 442


>gb|EXB78258.1| hypothetical protein L484_007776 [Morus notabilis]
          Length = 719

 Score =  250 bits (639), Expect = 2e-64
 Identities = 120/191 (62%), Positives = 142/191 (74%)
 Frame = +3

Query: 6   LVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAY 185
           L+RQLH +AV GGF SY SVNN L+T Y KNG L EAK++FYGM E KDEVSWNS+IVAY
Sbjct: 156 LIRQLHSVAVSGGFDSYTSVNNSLITYYGKNGHLGEAKKIFYGMSEMKDEVSWNSMIVAY 215

Query: 186 GQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENP 365
           GQ+REG+ AL L+++MV     VDM+             D LGG+QFHA+LIK GF+ N 
Sbjct: 216 GQNREGSKALSLFREMVRMGFNVDMFTLASVLTAFTSMGDFLGGLQFHAKLIKAGFNRNS 275

Query: 366 HVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQMQ 545
           HVGSGLID Y+KC G ML C+++F EI  PDLV+WNTMISG+SQN EFSE AL  F+QMQ
Sbjct: 276 HVGSGLIDFYSKCPGDMLVCRKIFEEILSPDLVLWNTMISGYSQNEEFSEAALDCFQQMQ 335

Query: 546 VAGHHPDDCSF 578
             GH PDDCSF
Sbjct: 336 RIGHCPDDCSF 346



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 5/189 (2%)
 Frame = +3

Query: 12  RQLHCLAVVGGFHSYA-SVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYG 188
           +Q+H LA+     S   SV+N L+T YSK G L +A+R+F  MPE  + VS NS+I  Y 
Sbjct: 363 KQIHSLAIKSEIPSNRISVSNALITMYSKCGNLRDARRLFDRMPE-HNTVSLNSMITGYA 421

Query: 189 QHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQ-FHAQLIKMGFHENP 365
           QH  G  ++ L++ ++  N+                   +  G + F+    K G     
Sbjct: 422 QHGFGMESISLFEQLLQANIVPSSITFISIISACAHTGKVSEGQKYFNMMKEKFGIEPEA 481

Query: 366 HVGSGLIDLYAKCRGSMLACKQVFSEIP-EPDLVIWNTMISGFSQ--NAEFSEEALAWFR 536
              S +IDL  +  G +   K++   +P  P   +W  ++    +  N E + +A     
Sbjct: 482 EHYSCVIDLLGRA-GKLAEAKRLIESMPIRPGSDVWAALLGACRKHGNVELAVKAANQCL 540

Query: 537 QMQVAGHHP 563
           Q++ +   P
Sbjct: 541 QLEPSNAVP 549


>ref|XP_004230390.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Solanum lycopersicum]
          Length = 720

 Score =  249 bits (637), Expect = 3e-64
 Identities = 121/192 (63%), Positives = 144/192 (75%)
 Frame = +3

Query: 3   DLVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVA 182
           D + QLH L++  G  SYASVNN L+T Y KNG LD A+ VF  M E KDEVSWNS+IVA
Sbjct: 157 DFITQLHSLSISAGLDSYASVNNTLITYYGKNGHLDYAREVFASMGEIKDEVSWNSMIVA 216

Query: 183 YGQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHEN 362
           YGQHREG  AL LY++M  R+L +DM+            +DL GG+QFH +LI+MGFHEN
Sbjct: 217 YGQHREGIKALALYKEMELRDLYLDMFTLASVLTALTSMEDLRGGLQFHGRLIRMGFHEN 276

Query: 363 PHVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQM 542
           PHVGSGLIDLY+KC  S+  CK+VF EIP PDLV+WNTMISG+SQ +E  EEA+A FRQM
Sbjct: 277 PHVGSGLIDLYSKCSASISECKKVFQEIPYPDLVLWNTMISGYSQ-SELCEEAVACFRQM 335

Query: 543 QVAGHHPDDCSF 578
           Q+AGH PDDCSF
Sbjct: 336 QLAGHQPDDCSF 347



 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 4/182 (2%)
 Frame = +3

Query: 15  QLHCLAVVGGFHSYASVNNILVTCYSK-NGFLDEAKRVFYGMPEFKDEVSWNSIIVAYGQ 191
           Q H   +  GFH    V + L+  YSK +  + E K+VF  +P + D V WN++I  Y Q
Sbjct: 263 QFHGRLIRMGFHENPHVGSGLIDLYSKCSASISECKKVFQEIP-YPDLVLWNTMISGYSQ 321

Query: 192 HREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENP-H 368
                 A+  ++ M     + D                   G Q H+  IK     N   
Sbjct: 322 SELCEEAVACFRQMQLAGHQPDDCSFVCVISASSNLSSPSQGKQIHSLAIKSSIPSNRIS 381

Query: 369 VGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEAL--AWFRQM 542
           V + LI +Y+KC GS+   + +F  +PE + V  N+MI+G++Q+   +E  L  AW  + 
Sbjct: 382 VNNALIAMYSKC-GSVQDARLLFDRMPEHNAVTLNSMIAGYAQHGHGTESLLLFAWMLES 440

Query: 543 QV 548
            +
Sbjct: 441 NI 442



 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
 Frame = +3

Query: 12  RQLHCLAVVGGFHSYA-SVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYG 188
           +Q+H LA+     S   SVNN L+  YSK G + +A+ +F  MPE  + V+ NS+I  Y 
Sbjct: 364 KQIHSLAIKSSIPSNRISVNNALIAMYSKCGSVQDARLLFDRMPE-HNAVTLNSMIAGYA 422

Query: 189 QHREGANALVLYQDMVHRNLK 251
           QH  G  +L+L+  M+  N+K
Sbjct: 423 QHGHGTESLLLFAWMLESNIK 443


>ref|XP_004288283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Fragaria vesca subsp. vesca]
          Length = 719

 Score =  245 bits (626), Expect = 5e-63
 Identities = 118/191 (61%), Positives = 143/191 (74%)
 Frame = +3

Query: 6   LVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAY 185
           L+RQLHC+ V GGF  Y SV+N L++ YSKNG L+EAKRVF  M   +DEV+WNS+IVAY
Sbjct: 156 LIRQLHCVVVRGGFDWYVSVSNALLSYYSKNGLLEEAKRVFSLMGGMQDEVTWNSMIVAY 215

Query: 186 GQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENP 365
           GQHREG  AL L+Q+MV R   VDM+            +DLLGG+QFHA+LIK GFH+N 
Sbjct: 216 GQHREGLKALGLFQEMVRRGFSVDMFTLASVLTAFTCVEDLLGGLQFHAKLIKTGFHQNS 275

Query: 366 HVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQMQ 545
           HVGSGLIDLY+KC G M  C++VF EIP PDLV+WNTMISG+SQ+ EFSE+A+   R MQ
Sbjct: 276 HVGSGLIDLYSKCAGGMSECRKVFEEIPAPDLVLWNTMISGYSQSDEFSEDAIDCLRHMQ 335

Query: 546 VAGHHPDDCSF 578
             G+ PDDCSF
Sbjct: 336 RVGYCPDDCSF 346



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
 Frame = +3

Query: 12  RQLHCLAVVGGFHSYA-SVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYG 188
           +Q+H LA+     S   SVNN LV  YSK G L +A+R+F  MPE  + VS NS+I  Y 
Sbjct: 363 KQIHALAIKSEIPSNRISVNNALVAMYSKCGKLQDARRLFDRMPE-HNTVSLNSMIAGYA 421

Query: 189 QHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENPH 368
           QH  G  +L L++ M+  N+                   +  G ++ + +++  F   P 
Sbjct: 422 QHGIGMESLCLFEHMLQTNVVPTSITFISVLSACAHTGKVEEGRKYFS-MMQEKFGIKPD 480

Query: 369 VG--SGLIDLYAKCRGSMLACKQVFSEIP-EPDLVIWNTMISGFSQ--NAEFSEEALAWF 533
           VG  S +IDL  +  G +   +++   +P  P  + W T++S      N + + EA   F
Sbjct: 481 VGHYSCMIDLLGRA-GKLGEAERLIEAMPFSPGTIGWATLLSACRTHGNIDLAVEAANKF 539

Query: 534 RQMQ 545
            Q++
Sbjct: 540 LQLE 543


>ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g49710 gi|6723416|emb|CAB66909.1| putative protein
           [Arabidopsis thaliana] gi|332645058|gb|AEE78579.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 721

 Score =  244 bits (624), Expect = 9e-63
 Identities = 118/194 (60%), Positives = 140/194 (72%), Gaps = 2/194 (1%)
 Frame = +3

Query: 3   DLVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVA 182
           DL++QLHC +V GGF SY+SVNN  VT YSK G L EA  VFYGM E +DEVSWNS+IVA
Sbjct: 155 DLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVA 214

Query: 183 YGQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHEN 362
           YGQH+EGA AL LY++M+ +  K+DM+            D L+GG QFH +LIK GFH+N
Sbjct: 215 YGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQN 274

Query: 363 PHVGSGLIDLYAKCRG--SMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFR 536
            HVGSGLID Y+KC G   M   ++VF EI  PDLV+WNTMISG+S N E SEEA+  FR
Sbjct: 275 SHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFR 334

Query: 537 QMQVAGHHPDDCSF 578
           QMQ  GH PDDCSF
Sbjct: 335 QMQRIGHRPDDCSF 348



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = +3

Query: 12  RQLHCLAVVGGFHSYA-SVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYG 188
           +Q+H LA+     S   SVNN L++ Y K+G L +A+ VF  MPE  + VS+N +I  Y 
Sbjct: 365 KQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPEL-NAVSFNCMIKGYA 423

Query: 189 QHREGANALVLYQDMV 236
           QH  G  AL+LYQ M+
Sbjct: 424 QHGHGTEALLLYQRML 439


>ref|XP_006292229.1| hypothetical protein CARUB_v10018435mg [Capsella rubella]
           gi|482560936|gb|EOA25127.1| hypothetical protein
           CARUB_v10018435mg [Capsella rubella]
          Length = 721

 Score =  243 bits (621), Expect = 2e-62
 Identities = 118/193 (61%), Positives = 139/193 (72%), Gaps = 2/193 (1%)
 Frame = +3

Query: 6   LVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAY 185
           L++QLHC AV GGF SY+SVNN  VT YSK G L EA  VFYGM E +DEVSWNS+IVAY
Sbjct: 156 LIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLKEAVSVFYGMDEIRDEVSWNSMIVAY 215

Query: 186 GQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENP 365
           GQH+EGA AL LY++M+ +  K+DM+            D L+GG QFH +LIK GFH+N 
Sbjct: 216 GQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDYLIGGRQFHCKLIKAGFHQNS 275

Query: 366 HVGSGLIDLYAKCRG--SMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQ 539
           HVGSGLID Y+KC G   M  C++VF EI  PDLV+WNTMISG+S N E SEEA+  F Q
Sbjct: 276 HVGSGLIDFYSKCGGRHGMSECEKVFQEILSPDLVLWNTMISGYSMNEELSEEAVKSFIQ 335

Query: 540 MQVAGHHPDDCSF 578
           MQ  GH PDDCSF
Sbjct: 336 MQRIGHRPDDCSF 348



 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +3

Query: 12  RQLHCLAVVGGFHSYA-SVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYG 188
           +Q+H LA+     S   SVNN L++ Y KNG L +A+RVF  MPE ++ VS+N +I  Y 
Sbjct: 365 KQIHGLAIKSHIPSNRISVNNALISLYYKNGNLQDARRVFDRMPE-RNVVSYNCMIKGYA 423

Query: 189 QHREGANALVLYQDMVHRNL 248
           QH  G  AL LYQ M++  +
Sbjct: 424 QHGHGTEALHLYQQMLNSGI 443


>ref|XP_006404111.1| hypothetical protein EUTSA_v10010157mg [Eutrema salsugineum]
           gi|557105230|gb|ESQ45564.1| hypothetical protein
           EUTSA_v10010157mg [Eutrema salsugineum]
          Length = 721

 Score =  243 bits (619), Expect = 3e-62
 Identities = 120/194 (61%), Positives = 140/194 (72%), Gaps = 2/194 (1%)
 Frame = +3

Query: 3   DLVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVA 182
           DL++QLHC +V GGF SY+SVNN  VT YSKNGFL EA  VFY M E +DEVSWNS+IV 
Sbjct: 155 DLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKNGFLKEAVSVFYVMDELRDEVSWNSMIVV 214

Query: 183 YGQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHEN 362
           YGQH+EGA AL LY++M+ +  K+DMY            + L+GG QFH  LIK GFH+N
Sbjct: 215 YGQHKEGAKALALYKEMILKGFKIDMYTLSSVLNALTSLNHLIGGRQFHGMLIKAGFHQN 274

Query: 363 PHVGSGLIDLYAKCRG--SMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFR 536
            HVGSGLIDLY+KC G   M   ++VF EI  PDLVIWNTMISG+S N E SEEA+  FR
Sbjct: 275 SHVGSGLIDLYSKCGGRYGMSDSEKVFREILFPDLVIWNTMISGYSLNEELSEEAVKSFR 334

Query: 537 QMQVAGHHPDDCSF 578
           QMQ  GH PDDCSF
Sbjct: 335 QMQRVGHRPDDCSF 348



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = +3

Query: 12  RQLHCLAVVGGFHSYA-SVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYG 188
           +Q+H LA+     S   SVNN L++ Y KNG L +A+R F  MPE  + VS+N +I  Y 
Sbjct: 365 KQIHGLAIKSHIPSNRISVNNALISLYCKNGNLKDARRAFDRMPEL-NVVSYNCMIKGYA 423

Query: 189 QHREGANALVLYQDMV 236
           QH     AL+LYQ M+
Sbjct: 424 QHGRVTEALLLYQQML 439


>ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321830|gb|EFH52251.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 721

 Score =  242 bits (617), Expect = 6e-62
 Identities = 118/194 (60%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
 Frame = +3

Query: 3   DLVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVA 182
           DL++QLHC AV GGF SY+SVNN  VT YSK G L EA  VFYGM   +DEVSWNS+IVA
Sbjct: 155 DLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVA 214

Query: 183 YGQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHEN 362
           YGQH+EGA AL LY++M+ +  K+DM+            D L+GG QFH +LIK GFH+N
Sbjct: 215 YGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQN 274

Query: 363 PHVGSGLIDLYAKC--RGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFR 536
            HVGSGLID Y+KC  R  M   ++VF EI  PDLV+WNTMISG+S N E SEEA+  FR
Sbjct: 275 SHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFR 334

Query: 537 QMQVAGHHPDDCSF 578
           QMQ  GH PDDCSF
Sbjct: 335 QMQRIGHRPDDCSF 348



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
 Frame = +3

Query: 12  RQLHCLAVVGGFHSYA-SVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYG 188
           +Q+H LA+     S   SVNN L++ Y K+G L +A+RVF  MPE  + VS+N +I  Y 
Sbjct: 365 KQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPEL-NAVSFNCMIKGYA 423

Query: 189 QHREGANALVLYQDMV 236
           QH  G  AL LYQ M+
Sbjct: 424 QHGHGTEALRLYQRML 439


>ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  240 bits (612), Expect = 2e-61
 Identities = 115/190 (60%), Positives = 141/190 (74%)
 Frame = +3

Query: 6   LVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAY 185
           L+RQLH L+VV G  SY SV N L+T YSKNGFL EA+R+F+ + E +DEVSWNS++VAY
Sbjct: 156 LIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAY 215

Query: 186 GQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENP 365
            QHREG+ AL LY +M  R L VD++             DLLGG+QFHA+LIK G+H+N 
Sbjct: 216 MQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNS 275

Query: 366 HVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQMQ 545
           HVGSGLIDLY+KC G ML C++VF EI  PDLV+WNTMISG+S   + S+EAL  FRQ+Q
Sbjct: 276 HVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQ 335

Query: 546 VAGHHPDDCS 575
           V GH PDDCS
Sbjct: 336 VVGHRPDDCS 345



 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
 Frame = +3

Query: 69  NILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYGQHREGANALVLYQDMVHRNL 248
           N L++ Y+K  +++ A ++F  MP+  D VS+N++I AY +  +   A  L+ +M    L
Sbjct: 78  NTLISAYAKESYVEVAHQLFDEMPQ-PDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFL 136

Query: 249 KVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENPHVGSGLIDLYAKCRGSMLACK 428
            +D +              L+   Q HA  +  G      VG+ LI  Y+K  G +   +
Sbjct: 137 DMDGFTLSGIITACGINVGLIR--QLHALSVVTGLDSYVSVGNALITSYSK-NGFLKEAR 193

Query: 429 QVFSEIPEP-DLVIWNTMISGFSQNAEFSEEALAWFRQMQVAG 554
           ++F  + E  D V WN+M+  + Q+ E S +AL  + +M V G
Sbjct: 194 RIFHWLSEDRDEVSWNSMVVAYMQHREGS-KALELYLEMTVRG 235



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 3/191 (1%)
 Frame = +3

Query: 15  QLHCLAVVGGFHSYASVNNILVTCYSK-NGFLDEAKRVFYGMPEFKDEVSWNSIIVAYGQ 191
           Q H   +  G+H  + V + L+  YSK  G + + ++VF  +    D V WN++I  Y  
Sbjct: 261 QFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISN-PDLVLWNTMISGYSL 319

Query: 192 HREGAN-ALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENP- 365
           + + ++ AL  ++ +     + D                   G Q H   +K+    N  
Sbjct: 320 YEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRI 379

Query: 366 HVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQMQ 545
            V + LI +Y+KC G++   K +F  +PE + V +N+MI+G++Q+     ++L  F++M 
Sbjct: 380 SVNNALIAMYSKC-GNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHG-MGFQSLHLFQRML 437

Query: 546 VAGHHPDDCSF 578
             G  P + +F
Sbjct: 438 EMGFTPTNITF 448



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 5/162 (3%)
 Frame = +3

Query: 12  RQLHCLAVVGGFHSYA-SVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYG 188
           RQ+H LA+     S   SVNN L+  YSK G L +AK +F  MPE  + VS+NS+I  Y 
Sbjct: 363 RQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPE-HNTVSYNSMIAGYA 421

Query: 189 QHREGANALVLYQDMVHRNL---KVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHE 359
           QH  G  +L L+Q M+        +               +D  G + F+    K G   
Sbjct: 422 QHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVED--GKIYFNMMKQKFGIEP 479

Query: 360 NPHVGSGLIDLYAKCRGSMLACKQVFSEIP-EPDLVIWNTMI 482
                S +IDL  +  G +   +++   IP +P    W+ ++
Sbjct: 480 EAGHFSCMIDLLGRA-GKLSEAERLIETIPFDPGFFFWSALL 520


>ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  237 bits (605), Expect = 1e-60
 Identities = 114/190 (60%), Positives = 140/190 (73%)
 Frame = +3

Query: 6   LVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAY 185
           L+RQLH L+VV G  SY SV N L+T YSKNGFL EA+R+F+ + E +DEVSWNS++VAY
Sbjct: 156 LIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAY 215

Query: 186 GQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENP 365
            QHREG+ AL LY +M  R L VD++             DLLGG+QFHA+LIK G+H+N 
Sbjct: 216 MQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNS 275

Query: 366 HVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQMQ 545
           HVGSGLIDLY+KC G ML C++VF EI  PDLV+WNTMISG+S   + S+EAL  FRQ+Q
Sbjct: 276 HVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQ 335

Query: 546 VAGHHPDDCS 575
             GH PDDCS
Sbjct: 336 GVGHRPDDCS 345



 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
 Frame = +3

Query: 69  NILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYGQHREGANALVLYQDMVHRNL 248
           N L++ Y+K  +++ A ++F  MP+  D VS+N++I AY +  +   A  L+ +M    L
Sbjct: 78  NTLISAYAKESYVEVAHQLFDEMPQ-PDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFL 136

Query: 249 KVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENPHVGSGLIDLYAKCRGSMLACK 428
            +D +              L+   Q HA  +  G      VG+ LI  Y+K  G +   +
Sbjct: 137 DMDGFTLSGIITACGINVGLIR--QLHALSVVTGLDSYVSVGNALITSYSK-NGFLKEAR 193

Query: 429 QVFSEIPEP-DLVIWNTMISGFSQNAEFSEEALAWFRQMQVAG 554
           ++F  + E  D V WN+M+  + Q+ E S +AL  + +M V G
Sbjct: 194 RIFHWLSEDRDEVSWNSMVVAYMQHREGS-KALELYLEMTVRG 235



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
 Frame = +3

Query: 15  QLHCLAVVGGFHSYASVNNILVTCYSK-NGFLDEAKRVFYGMPEFKDEVSWNSIIVAYGQ 191
           Q H   +  G+H  + V + L+  YSK  G + + ++VF  +    D V WN++I  Y  
Sbjct: 261 QFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISN-PDLVLWNTMISGYSL 319

Query: 192 HREGAN-ALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENP- 365
           + + ++ AL  ++ +     + D                   G Q H   +K+    N  
Sbjct: 320 YEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRI 379

Query: 366 HVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQMQ 545
            V + LI +Y+KC G++   K +F  +PE + V +N+MI+G++Q+     ++L  F++M 
Sbjct: 380 SVNNALIAMYSKC-GNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHG-MGFQSLHLFQRML 437

Query: 546 VAGHHPDDCSF 578
                P + +F
Sbjct: 438 EMDFTPTNITF 448



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
 Frame = +3

Query: 12  RQLHCLAVVGGFHSYA-SVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYG 188
           RQ+H LA+     S   SVNN L+  YSK G L +AK +F  MPE  + VS+NS+I  Y 
Sbjct: 363 RQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPE-HNTVSYNSMIAGYA 421

Query: 189 QHREGANALVLYQDMVHRNL---KVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHE 359
           QH  G  +L L+Q M+  +     +               +D  G + F+    K G   
Sbjct: 422 QHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVED--GKIYFNMMKQKFGIEP 479

Query: 360 NPHVGSGLIDLYAKCRGSMLACKQVFSEIP-EPDLVIWNTMI 482
                S +IDL  +  G +   +++   IP +P    W+ ++
Sbjct: 480 EAGHFSCMIDLLGRA-GKLSEAERLIETIPFDPGFFXWSALL 520


>ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  235 bits (599), Expect = 7e-60
 Identities = 114/193 (59%), Positives = 140/193 (72%), Gaps = 2/193 (1%)
 Frame = +3

Query: 6   LVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMPEF--KDEVSWNSIIV 179
           LVRQLHC  VV G+  YASVNN ++ CYS+ GFL+EA+RVF  M E   +DEVSWN++IV
Sbjct: 157 LVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIV 216

Query: 180 AYGQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHE 359
           A GQHREG  A+ L+++MV R LKVDM+             DL+GG+QFH  +IK GFH 
Sbjct: 217 ACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHG 276

Query: 360 NPHVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQ 539
           N HVGSGLIDLY+KC G M+ C++VF EI  PDLV+WNTMISGFSQ  + SE+ +  FR+
Sbjct: 277 NSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFRE 336

Query: 540 MQVAGHHPDDCSF 578
           MQ  G HPDDCSF
Sbjct: 337 MQHNGFHPDDCSF 349



 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 6/184 (3%)
 Frame = +3

Query: 12  RQLHCLAVVGGF-HSYASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYG 188
           +Q+H LA+     ++  SVNN LV  YSK G + +A+RVF  MPE  + VS NS+I  Y 
Sbjct: 366 KQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPE-HNMVSLNSMIAGYA 424

Query: 189 QHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENPH 368
           QH     +L L++ M+ +++  +                +  G Q +  ++K  F   P 
Sbjct: 425 QHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEG-QKYFNMMKERFRIEPE 483

Query: 369 VG--SGLIDLYAKCRGSMLACKQVFSEIP-EPDLVIWNTMISGFSQ--NAEFSEEALAWF 533
               S +IDL  +  G +   +++   +P  P  + W T++    +  N E + +A   F
Sbjct: 484 AEHYSCMIDLLGRA-GKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEF 542

Query: 534 RQMQ 545
            Q++
Sbjct: 543 LQLE 546


>ref|XP_002530602.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529850|gb|EEF31782.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 567

 Score =  234 bits (598), Expect = 9e-60
 Identities = 116/193 (60%), Positives = 139/193 (72%), Gaps = 1/193 (0%)
 Frame = +3

Query: 3   DLVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGMP-EFKDEVSWNSIIV 179
           +L+RQLHCLA   G  SY SV N  VT Y KNGFL+EA+RVFYG+  E +D+VSWN++IV
Sbjct: 155 NLIRQLHCLAGNYGLDSYVSVKNSFVTYYGKNGFLEEAERVFYGIEIENRDQVSWNTMIV 214

Query: 180 AYGQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHE 359
           AYG+ REG  AL L+Q+M HR + VDMY            +DL GG QFHA LIK GF+ 
Sbjct: 215 AYGRQREGFKALKLFQEMTHRGIDVDMYTLASVLTAFTCLEDLFGGFQFHANLIKTGFYR 274

Query: 360 NPHVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQ 539
           N HVGSGL+DLYAKC G ML C+++F EI EPDLV+WNTMIS +S + E SEE L  FR+
Sbjct: 275 NCHVGSGLVDLYAKCGGGMLDCRKIFVEIREPDLVLWNTMISAYSLDEELSEETLDCFRR 334

Query: 540 MQVAGHHPDDCSF 578
           MQ AG  PDDCSF
Sbjct: 335 MQRAGFRPDDCSF 347



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
 Frame = +3

Query: 69  NILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYGQHREGANALVLYQDMVHRNL 248
           N+L+  Y+K      A+ +F  +P+  D +S+N++I AY    +  NAL L+++M    +
Sbjct: 78  NVLLDAYAKKSLTHIARGLFDQIPQ-PDAISYNTLITAYADCGDSLNALYLFREMRETGI 136

Query: 249 KVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHENPHVGSGLIDLYAKCRGSMLACK 428
            +D Y             +L+   Q H      G      V +  +  Y K  G +   +
Sbjct: 137 DMDGYTLSGVITACCNDVNLIR--QLHCLAGNYGLDSYVSVKNSFVTYYGK-NGFLEEAE 193

Query: 429 QVF--SEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQMQVAG 554
           +VF   EI   D V WNTMI  + +  E   +AL  F++M   G
Sbjct: 194 RVFYGIEIENRDQVSWNTMIVAYGRQRE-GFKALKLFQEMTHRG 236


>ref|XP_002320672.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550323097|gb|EEE98987.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 720

 Score =  231 bits (589), Expect = 1e-58
 Identities = 116/192 (60%), Positives = 138/192 (71%), Gaps = 1/192 (0%)
 Frame = +3

Query: 6   LVRQLHCLAVVGGFHSYASVNNILVTCYSKNGFLDEAKRVFYGM-PEFKDEVSWNSIIVA 182
           L+RQLH LA   GF SY SV N L+T YSKNG L+EA+ VF GM  E +DEVSWNS+IVA
Sbjct: 156 LIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVA 215

Query: 183 YGQHREGANALVLYQDMVHRNLKVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHEN 362
           YGQH+ G  AL LY+DMVHR  ++DM+            +DL GG+QFHA+ IK GF++N
Sbjct: 216 YGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKN 275

Query: 363 PHVGSGLIDLYAKCRGSMLACKQVFSEIPEPDLVIWNTMISGFSQNAEFSEEALAWFRQM 542
            HVGSGLID+YAKC   M   ++VF EI   DLV+WNTMISG+SQN E S EAL  FRQM
Sbjct: 276 RHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQM 335

Query: 543 QVAGHHPDDCSF 578
           Q AG+ PDDCSF
Sbjct: 336 QRAGYWPDDCSF 347



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 7/185 (3%)
 Frame = +3

Query: 12  RQLHCLAVVGGFHS-YASVNNILVTCYSKNGFLDEAKRVFYGMPEFKDEVSWNSIIVAYG 188
           +Q H LA+     S   SVNN LVT YSK G L +A+++F  MP+  + V+ NSII  Y 
Sbjct: 364 KQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQ-HNTVTLNSIIAGYA 422

Query: 189 QHREGANALVLYQDMVHRNL---KVDMYXXXXXXXXXXXXDDLLGGVQFHAQLIKMGFHE 359
           QH  G  +L L++ M+  ++    + +             ++  G   F+      G   
Sbjct: 423 QHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEE--GKKYFNMMKDIFGIEP 480

Query: 360 NPHVGSGLIDLYAKCRGSMLACKQVFSEIP-EPDLVIWNTMISGFSQ--NAEFSEEALAW 530
                S +IDL  +  G +   +++   +P  P    W  ++    +  N E +E+A   
Sbjct: 481 EAEHYSCMIDLLGRA-GKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQ 539

Query: 531 FRQMQ 545
           F Q++
Sbjct: 540 FLQLE 544