BLASTX nr result
ID: Rauwolfia21_contig00010777
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00010777
(765 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001235453.1| uncharacterized protein LOC100500002 [Glycin... 62 3e-07
gb|ESW19238.1| hypothetical protein PHAVU_006G108000g [Phaseolus... 61 5e-07
ref|XP_004247411.1| PREDICTED: U1 small nuclear ribonucleoprotei... 61 5e-07
emb|CBI36876.3| unnamed protein product [Vitis vinifera] 61 5e-07
ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotei... 61 5e-07
ref|NP_001274791.1| uncharacterized protein LOC102601989 [Solanu... 61 5e-07
ref|XP_004494379.1| PREDICTED: U1 small nuclear ribonucleoprotei... 60 6e-07
gb|EOX95113.1| Spliceosomal protein U1A [Theobroma cacao] 60 8e-07
ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotei... 60 8e-07
gb|ACU24174.1| unknown [Glycine max] 60 8e-07
ref|XP_006840473.1| hypothetical protein AMTR_s00045p00183440 [A... 59 1e-06
gb|AFK36658.1| unknown [Medicago truncatula] 59 1e-06
ref|XP_002880313.1| hypothetical protein ARALYDRAFT_483938 [Arab... 59 1e-06
gb|ACJ84781.1| unknown [Medicago truncatula] 59 1e-06
ref|NP_182280.1| spliceosomal protein U1A [Arabidopsis thaliana]... 59 1e-06
ref|XP_004152246.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuc... 59 2e-06
gb|EPS69668.1| hypothetical protein M569_05098 [Genlisea aurea] 59 2e-06
ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotei... 59 2e-06
ref|XP_006654062.1| PREDICTED: U1 small nuclear ribonucleoprotei... 58 4e-06
ref|XP_006397952.1| hypothetical protein EUTSA_v10001603mg [Eutr... 58 4e-06
>ref|NP_001235453.1| uncharacterized protein LOC100500002 [Glycine max]
gi|255628437|gb|ACU14563.1| unknown [Glycine max]
Length = 241
Score = 61.6 bits (148), Expect = 3e-07
Identities = 26/31 (83%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYAKTKSD++AKADG+FVPREKRK+HDD+
Sbjct: 87 RIQYAKTKSDIIAKADGTFVPREKRKRHDDK 117
>gb|ESW19238.1| hypothetical protein PHAVU_006G108000g [Phaseolus vulgaris]
Length = 241
Score = 60.8 bits (146), Expect = 5e-07
Identities = 26/31 (83%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
+IQYAKTKSDV+AKADG+FVPREKRK+HDD+
Sbjct: 87 KIQYAKTKSDVIAKADGTFVPREKRKRHDDK 117
>ref|XP_004247411.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Solanum
lycopersicum]
Length = 253
Score = 60.8 bits (146), Expect = 5e-07
Identities = 27/31 (87%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYAKTKSDVVAKADG+FVPREKRK+H+D+
Sbjct: 96 RIQYAKTKSDVVAKADGTFVPREKRKRHEDK 126
>emb|CBI36876.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 60.8 bits (146), Expect = 5e-07
Identities = 26/31 (83%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYAKTKSDV+AKADG+FVPRE+R++HDDR
Sbjct: 74 RIQYAKTKSDVIAKADGTFVPRERRRRHDDR 104
>ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
Length = 245
Score = 60.8 bits (146), Expect = 5e-07
Identities = 26/31 (83%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYAKTKSDV+AKADG+FVPRE+R++HDDR
Sbjct: 87 RIQYAKTKSDVIAKADGTFVPRERRRRHDDR 117
>ref|NP_001274791.1| uncharacterized protein LOC102601989 [Solanum tuberosum]
gi|1050840|emb|CAA90282.1| U1snRNP-specific protein, U1A
[Solanum tuberosum]
Length = 253
Score = 60.8 bits (146), Expect = 5e-07
Identities = 27/31 (87%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYAKTKSDVVAKADG+FVPREKRK+H+D+
Sbjct: 96 RIQYAKTKSDVVAKADGTFVPREKRKRHEDK 126
>ref|XP_004494379.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cicer
arietinum]
Length = 241
Score = 60.5 bits (145), Expect = 6e-07
Identities = 25/31 (80%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYA+TKSD++AKADG+FVPREKRK+HDD+
Sbjct: 87 RIQYARTKSDIIAKADGTFVPREKRKRHDDK 117
>gb|EOX95113.1| Spliceosomal protein U1A [Theobroma cacao]
Length = 260
Score = 60.1 bits (144), Expect = 8e-07
Identities = 25/31 (80%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYAKTKSD++AKADG+FVPREKRK+H+D+
Sbjct: 87 RIQYAKTKSDIIAKADGTFVPREKRKRHEDK 117
>ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Glycine max]
Length = 241
Score = 60.1 bits (144), Expect = 8e-07
Identities = 25/31 (80%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYAKTKSD++AKADG+FVPREKRK+HD++
Sbjct: 87 RIQYAKTKSDIIAKADGTFVPREKRKRHDEK 117
>gb|ACU24174.1| unknown [Glycine max]
Length = 241
Score = 60.1 bits (144), Expect = 8e-07
Identities = 25/31 (80%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYAKTKSD++AKADG+FVPREKRK+HD++
Sbjct: 87 RIQYAKTKSDIIAKADGTFVPREKRKRHDEK 117
>ref|XP_006840473.1| hypothetical protein AMTR_s00045p00183440 [Amborella trichopoda]
gi|548842191|gb|ERN02148.1| hypothetical protein
AMTR_s00045p00183440 [Amborella trichopoda]
Length = 230
Score = 59.3 bits (142), Expect = 1e-06
Identities = 25/31 (80%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYAKTKSDV++KADG+FVPRE+RK+HD+R
Sbjct: 74 RIQYAKTKSDVISKADGTFVPRERRKRHDER 104
>gb|AFK36658.1| unknown [Medicago truncatula]
Length = 232
Score = 59.3 bits (142), Expect = 1e-06
Identities = 25/31 (80%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYA+TKSDV+AKA+G+FVPREKRK+HDD+
Sbjct: 74 RIQYARTKSDVIAKAEGTFVPREKRKRHDDK 104
>ref|XP_002880313.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
lyrata] gi|297326152|gb|EFH56572.1| hypothetical protein
ARALYDRAFT_483938 [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/31 (83%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYAKTKSDVVAKADG+FVPREKRK+H+++
Sbjct: 91 RIQYAKTKSDVVAKADGTFVPREKRKRHEEK 121
>gb|ACJ84781.1| unknown [Medicago truncatula]
Length = 245
Score = 59.3 bits (142), Expect = 1e-06
Identities = 25/31 (80%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYA+TKSDV+AKA+G+FVPREKRK+HDD+
Sbjct: 87 RIQYARTKSDVIAKAEGTFVPREKRKRHDDK 117
>ref|NP_182280.1| spliceosomal protein U1A [Arabidopsis thaliana]
gi|75319458|sp|Q39244.1|RU1A_ARATH RecName: Full=U1
small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A gi|1050430|emb|CAA90283.1| U1snRNP-specific
protein [Arabidopsis thaliana] gi|2529669|gb|AAC62852.1|
small nuclear ribonucleoprotein U1A [Arabidopsis
thaliana] gi|15450591|gb|AAK96567.1| At2g47580/T30B22.12
[Arabidopsis thaliana] gi|16649011|gb|AAL24357.1| small
nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|20259986|gb|AAM13340.1| small nuclear
ribonucleoprotein U1A [Arabidopsis thaliana]
gi|22655484|gb|AAM98334.1| At2g47580/T30B22.12
[Arabidopsis thaliana] gi|330255767|gb|AEC10861.1|
spliceosomal protein U1A [Arabidopsis thaliana]
Length = 250
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/31 (83%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYAKTKSDVVAKADG+FVPREKRK+H+++
Sbjct: 91 RIQYAKTKSDVVAKADGTFVPREKRKRHEEK 121
>ref|XP_004152246.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Cucumis sativus]
Length = 248
Score = 58.9 bits (141), Expect = 2e-06
Identities = 24/32 (75%), Positives = 32/32 (100%)
Frame = +2
Query: 668 QRIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
+RIQYAKTKSD++AK+DGSFVPREKRK+H+++
Sbjct: 93 RRIQYAKTKSDIIAKSDGSFVPREKRKRHEEK 124
>gb|EPS69668.1| hypothetical protein M569_05098 [Genlisea aurea]
Length = 237
Score = 58.5 bits (140), Expect = 2e-06
Identities = 25/31 (80%), Positives = 30/31 (96%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYAKTKSD +AKADG+FVPREK++KH+DR
Sbjct: 88 RIQYAKTKSDCIAKADGTFVPREKKRKHEDR 118
>ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 242
Score = 58.5 bits (140), Expect = 2e-06
Identities = 24/31 (77%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYAKTKSD++AK+DGSFVPREKRK+H+++
Sbjct: 88 RIQYAKTKSDIIAKSDGSFVPREKRKRHEEK 118
>ref|XP_006654062.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Oryza
brachyantha]
Length = 252
Score = 57.8 bits (138), Expect = 4e-06
Identities = 24/31 (77%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQYAKTKSD++AKADG+FVPRE+RK++DD+
Sbjct: 95 RIQYAKTKSDIIAKADGTFVPRERRKRNDDK 125
>ref|XP_006397952.1| hypothetical protein EUTSA_v10001603mg [Eutrema salsugineum]
gi|557099025|gb|ESQ39405.1| hypothetical protein
EUTSA_v10001603mg [Eutrema salsugineum]
Length = 247
Score = 57.8 bits (138), Expect = 4e-06
Identities = 25/31 (80%), Positives = 31/31 (100%)
Frame = +2
Query: 671 RIQYAKTKSDVVAKADGSFVPREKRKKHDDR 763
RIQ+AKTKSDVVAKADG+FVPREKRK+H+++
Sbjct: 89 RIQFAKTKSDVVAKADGTFVPREKRKRHEEK 119