BLASTX nr result

ID: Rauwolfia21_contig00010704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00010704
         (998 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173390.1| hypothetical protein NitaMp044 [Nicotiana tabac...    95   6e-30
ref|XP_004510058.1| PREDICTED: uncharacterized protein LOC101507...    59   3e-10
ref|XP_003588347.1| NADH-ubiquinone oxidoreductase chain [Medica...    59   3e-10
gb|EXB74570.1| hypothetical protein L484_026267 [Morus notabilis]      63   6e-10
ref|YP_173391.1| hypothetical protein NitaMp045 [Nicotiana tabac...    67   8e-09

>ref|YP_173390.1| hypothetical protein NitaMp044 [Nicotiana tabacum]
           gi|56806553|dbj|BAD83454.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 222

 Score = 94.7 bits (234), Expect(3) = 6e-30
 Identities = 53/88 (60%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
 Frame = +2

Query: 308 ALFFSLLKRVIISITVLSY-PFEL*LGLFFGSQAAFFAPFLTDLLDFLLSAMDRIPLSVG 484
           ALFFSLLKR+ +S+TVL   P  L     F  +AAFF  FL+D LDF LS MDRIPLSVG
Sbjct: 17  ALFFSLLKRIFLSLTVLLLTPILLNCNWDFSFEAAFFTSFLSDFLDFWLSLMDRIPLSVG 76

Query: 485 DDRSGASFSKQPSFDLNVPAAEQAVYER 568
            D SG S SK+PSFDLN+ AAE+   +R
Sbjct: 77  GDGSGPSLSKKPSFDLNISAAEEEPGDR 104



 Score = 43.1 bits (100), Expect(3) = 6e-30
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
 Frame = +1

Query: 571 EIKNQKQTLANLLDPLIKKEAEK------YPDIKKLPSPTDVVEQLIRRIGSNKARAEND 732
           +IK QK  LA  + PLI+ E  +      + ++ +LPSP+++VE +I R GS  A   N 
Sbjct: 118 KIKEQKDLLAEQISPLIESEKARLVRRKWHRNLDELPSPSEMVEIIIDRFGSKAAYNANK 177

Query: 733 HNAPGISRR 759
            N P  + R
Sbjct: 178 PNVPRANLR 186



 Score = 41.2 bits (95), Expect(3) = 6e-30
 Identities = 18/35 (51%), Positives = 27/35 (77%)
 Frame = +3

Query: 744 RNLKTWLTRACQNAEDETKGHMSIRSEIRAIIQEY 848
           R+L+ WLTRA  +AE + KG+MSI++ I +II+ Y
Sbjct: 186 RHLRAWLTRAQHSAEQDGKGNMSIKNHISSIIEGY 220


>ref|XP_004510058.1| PREDICTED: uncharacterized protein LOC101507236 [Cicer arietinum]
          Length = 614

 Score = 58.5 bits (140), Expect(2) = 3e-10
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +1

Query: 907 PPPQAELVSRVIGDHFARFGGHLSQPP 987
           P PQAELVSRVIGDHFARFGGHLSQPP
Sbjct: 54  PTPQAELVSRVIGDHFARFGGHLSQPP 80



 Score = 33.9 bits (76), Expect(2) = 3e-10
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = +3

Query: 843 EYSQNDSENSLSFPDRRRIIGTPTP 917
           + S +D  +S   PDRRRIIGTPTP
Sbjct: 32  DLSADDDVHSWGAPDRRRIIGTPTP 56


>ref|XP_003588347.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477395|gb|AES58598.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 339

 Score = 58.5 bits (140), Expect(2) = 3e-10
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +1

Query: 907 PPPQAELVSRVIGDHFARFGGHLSQPP 987
           P PQAELVSRVIGDHFARFGGHLSQPP
Sbjct: 54  PTPQAELVSRVIGDHFARFGGHLSQPP 80



 Score = 33.9 bits (76), Expect(2) = 3e-10
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = +3

Query: 843 EYSQNDSENSLSFPDRRRIIGTPTP 917
           + S +D  +S   PDRRRIIGTPTP
Sbjct: 32  DLSADDDVHSWGAPDRRRIIGTPTP 56


>gb|EXB74570.1| hypothetical protein L484_026267 [Morus notabilis]
          Length = 169

 Score = 63.2 bits (152), Expect(2) = 6e-10
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = +3

Query: 909 PTPGRVSEPCNRRPFRAVRGALESAAGAR 995
           PTPGRVSEPCNRRPFRAVRGALESAAGAR
Sbjct: 124 PTPGRVSEPCNRRPFRAVRGALESAAGAR 152



 Score = 28.1 bits (61), Expect(2) = 6e-10
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +2

Query: 884 GPPTNNRYPHP 916
           GPPTNNRYP P
Sbjct: 116 GPPTNNRYPTP 126


>ref|YP_173391.1| hypothetical protein NitaMp045 [Nicotiana tabacum]
           gi|56806554|dbj|BAD83455.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 102

 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 43/77 (55%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = -3

Query: 534 LRSKEGCLEKLAPLRSSPTERGILSMAESKKSSKSVRNGAKKAAWL-XXXXXXXXXXXXX 358
           LRSKEG  +KL PL S PTERGILS+ ES+KS KS+RN  KKAA                
Sbjct: 2   LRSKEGFFDKLGPLPSPPTERGILSIKESQKSRKSLRNEVKKAASKEKSQLQFKRIGVSK 61

Query: 357 STVILIITRFKREKNKA 307
            TV L   RFKREKNKA
Sbjct: 62  RTVRLRKIRFKREKNKA 78


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