BLASTX nr result

ID: Rauwolfia21_contig00010114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00010114
         (1046 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869052.1| La domain-containing protein [Arabidopsis ly...    58   7e-06

>ref|XP_002869052.1| La domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314888|gb|EFH45311.1| La domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 526

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 49/159 (30%), Positives = 63/159 (39%), Gaps = 1/159 (0%)
 Frame = +2

Query: 455 MATAPSNPSPTQQHSPRAAVEXXXXXXXXXXXXXXXXXXXXXXPWTQIVRGGGDLEXXXX 634
           MA+A SN S +   SPR   E                      PWTQIVRG  +LE    
Sbjct: 1   MASATSNNSASSSMSPRRISENHGSPIAAVSQSPRRPSRQVSSPWTQIVRG--ELEPIAA 58

Query: 635 XXXXXXXXXXXXXXXXXXXXQEQIMTTPSDRSPPKAASTVTAAASIPAPLEDGAAEAQPD 814
                                    ++P  R+P +  ++V+ AA  PA +    A A  +
Sbjct: 59  AAAAAGP------------------SSPQSRAPIEPIASVSVAAP-PASVLTVEAAAGDE 99

Query: 815 XXXXXXXXXXXXKKPAWNK-LNGGTEVGPVMGAVSWPAL 928
                       KKP W +  NG +EVGPVMGA SWPAL
Sbjct: 100 KSEESGGQGNAGKKPVWKRPSNGASEVGPVMGASSWPAL 138


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