BLASTX nr result
ID: Rauwolfia21_contig00009907
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00009907
(1239 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006360499.1| PREDICTED: ribosome-recycling factor, chloro... 320 6e-85
ref|XP_004250014.1| PREDICTED: ribosome-recycling factor-like [S... 319 1e-84
gb|EOY20313.1| Ribosome recycling factor [Theobroma cacao] 294 6e-77
ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis ... 293 1e-76
emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera] 293 1e-76
ref|XP_002298606.1| hypothetical protein POPTR_0001s34130g [Popu... 288 3e-75
ref|NP_186829.3| ribosome recycling factor [Arabidopsis thaliana... 279 1e-72
ref|XP_006447119.1| hypothetical protein CICLE_v10016267mg [Citr... 279 2e-72
dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis ... 278 3e-72
ref|XP_006408549.1| hypothetical protein EUTSA_v10021359mg [Eutr... 276 2e-71
ref|XP_006298338.1| hypothetical protein CARUB_v10014408mg [Caps... 270 7e-70
ref|XP_004511047.1| PREDICTED: ribosome-recycling factor-like is... 270 9e-70
ref|XP_004511046.1| PREDICTED: ribosome-recycling factor-like is... 270 9e-70
ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus... 270 9e-70
gb|ESW05716.1| hypothetical protein PHAVU_011G203500g [Phaseolus... 269 2e-69
gb|EMJ17040.1| hypothetical protein PRUPE_ppa010230mg [Prunus pe... 267 6e-69
ref|XP_003627922.1| Ribosome-recycling factor [Medicago truncatu... 266 1e-68
gb|AFK48535.1| unknown [Medicago truncatula] 263 1e-67
ref|NP_001242099.1| uncharacterized protein LOC100814905 [Glycin... 262 2e-67
gb|AAF03454.1|AC010797_30 putative ribosome recycling factor [Ar... 259 1e-66
>ref|XP_006360499.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Solanum
tuberosum]
Length = 280
Score = 320 bits (821), Expect = 6e-85
Identities = 176/285 (61%), Positives = 211/285 (74%), Gaps = 3/285 (1%)
Frame = +2
Query: 47 MAISVRRALISCRNLSHLIRTTTFVPARHISHLAS-FSPYPCRYSRCAAIPSS--SVMSF 217
MAIS RRAL + RN+ +R T F R S + S FSP R +P S +F
Sbjct: 1 MAISTRRALAAYRNIYGALRATNFTANRFSSLIGSTFSPI-----RYETVPCSLEQTTNF 55
Query: 218 LSESRRGFAKGRRQTKFXXXXXXXXXGIATQKNIQSSVKATAISQMEAAVDALSRELAKL 397
L ESRR FAKGR+Q + + T N+ ++KATA+SQMEAA+DALSREL KL
Sbjct: 56 LLESRRSFAKGRKQIR-DEVDGDDYGSVTTAVNVGPNIKATAVSQMEAAIDALSRELTKL 114
Query: 398 RTGRASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAITSSPL 577
RTGRASAGMLDHIIV++GG+K PL RMAV+SV+D KTLSV PYDP++LKELEKAI SSPL
Sbjct: 115 RTGRASAGMLDHIIVDSGGVKTPLCRMAVISVLDPKTLSVNPYDPDSLKELEKAIISSPL 174
Query: 578 GINPKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXXXXXXXX 757
G+NP++DNQRLI IPPLTKEH+QAVCKVVAKSSEDVKQSIRRARQKALD++
Sbjct: 175 GLNPQSDNQRLIVPIPPLTKEHVQAVCKVVAKSSEDVKQSIRRARQKALDTIKKSVPKKK 234
Query: 758 XXXXXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEITA 892
S+FS+D+AKRLEKEID++TKKFIK AEDMC+ K+KEIT+
Sbjct: 235 DKDKSASAFSDDDAKRLEKEIDDLTKKFIKSAEDMCKSKDKEITS 279
>ref|XP_004250014.1| PREDICTED: ribosome-recycling factor-like [Solanum lycopersicum]
Length = 277
Score = 319 bits (818), Expect = 1e-84
Identities = 175/284 (61%), Positives = 209/284 (73%), Gaps = 2/284 (0%)
Frame = +2
Query: 47 MAISVRRALISCRNLSHLIRTTTFVPARHISHLASFSPYPCRYSRCAAIPSS--SVMSFL 220
MAIS RRAL + RN+ +R T F R I S P RY +P S +FL
Sbjct: 1 MAISTRRALAAYRNIYGALRATNFTANRLIGSTLS----PIRYE---TVPCSLEQTTNFL 53
Query: 221 SESRRGFAKGRRQTKFXXXXXXXXXGIATQKNIQSSVKATAISQMEAAVDALSRELAKLR 400
ESRR FAKGR+Q + + T N+ ++KATA+SQMEAA+DALSREL KLR
Sbjct: 54 LESRRSFAKGRKQIR-EEVDGDDYGSVTTAVNVGPNIKATAVSQMEAAIDALSRELTKLR 112
Query: 401 TGRASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAITSSPLG 580
TGRASAGMLDHIIV++GG+K PL RMAV+SV+D KTLSV PYDP++LKELEKAI SSPLG
Sbjct: 113 TGRASAGMLDHIIVDSGGVKTPLCRMAVISVLDPKTLSVNPYDPDSLKELEKAIISSPLG 172
Query: 581 INPKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXXXXXXXXX 760
+NP++DNQRLI IPPLTKEH+QAVCKVVAKSSEDVKQSIRRARQKALD++
Sbjct: 173 LNPQSDNQRLIVPIPPLTKEHVQAVCKVVAKSSEDVKQSIRRARQKALDTIKKSVPKKKD 232
Query: 761 XXXXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEITA 892
S+FSED+AKRLEKEID++TKKFIK AEDMC+ K++EIT+
Sbjct: 233 KDKSASAFSEDDAKRLEKEIDDLTKKFIKSAEDMCKSKDREITS 276
>gb|EOY20313.1| Ribosome recycling factor [Theobroma cacao]
Length = 264
Score = 294 bits (752), Expect = 6e-77
Identities = 168/284 (59%), Positives = 207/284 (72%), Gaps = 1/284 (0%)
Frame = +2
Query: 47 MAISVRRALISCRNLSHLIRTTTFVPARHISH-LASFSPYPCRYSRCAAIPSSSVMSFLS 223
MA+ +RRA I RN + L+R++ + ++SH + S + C + + + S FL
Sbjct: 1 MALYLRRA-IRLRNTALLLRSSK-IQTCNVSHFIFSQNQKTCHSQKPSPLSS---FDFLR 55
Query: 224 ESRRGFAKGRRQTKFXXXXXXXXXGIATQKNIQSSVKATAISQMEAAVDALSRELAKLRT 403
+SRRGFAKG++ I +I +VKA+A SQM+AA+ ALSRELAKLRT
Sbjct: 56 DSRRGFAKGKKSKD-----DSGGNTIELAPDIGPTVKASAASQMDAAIVALSRELAKLRT 110
Query: 404 GRASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAITSSPLGI 583
GRASAGMLDHIIVETGG+KM L+ +AVVSVIDSKTLS+ PYDPNT+KELE AI SSPLG+
Sbjct: 111 GRASAGMLDHIIVETGGVKMQLNHLAVVSVIDSKTLSINPYDPNTIKELESAIVSSPLGL 170
Query: 584 NPKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXXXXXXXXXX 763
NP+ D QRLIAAIPPLTKEHMQA+CKVVAKSSEDVKQSIRRARQKALD++
Sbjct: 171 NPRVDGQRLIAAIPPLTKEHMQAMCKVVAKSSEDVKQSIRRARQKALDAI---------- 220
Query: 764 XXXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEITAG 895
GSSF +D AKRLEKEIDE+TK+ +K A+D+C+ KEKEIT G
Sbjct: 221 KKAGSSFPKDEAKRLEKEIDELTKRLVKAADDLCKAKEKEITQG 264
>ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis vinifera]
gi|296090242|emb|CBI40061.3| unnamed protein product
[Vitis vinifera]
Length = 258
Score = 293 bits (750), Expect = 1e-76
Identities = 170/290 (58%), Positives = 202/290 (69%), Gaps = 7/290 (2%)
Frame = +2
Query: 47 MAISVRRA-------LISCRNLSHLIRTTTFVPARHISHLASFSPYPCRYSRCAAIPSSS 205
MAISVRRA L+ CR+LSH+I + +++ S +P +SS
Sbjct: 1 MAISVRRAFSYRSILLLHCRHLSHIIHSP------NLTGSPSLNP-----------SASS 43
Query: 206 VMSFLSESRRGFAKGRRQTKFXXXXXXXXXGIATQKNIQSSVKATAISQMEAAVDALSRE 385
+ FL ESRRGFAKGR+ + +I +VK A+SQM+AAV ALSRE
Sbjct: 44 ALDFLRESRRGFAKGRKSKDSDAGNT-----VEVVPDIGPAVKENAMSQMDAAVVALSRE 98
Query: 386 LAKLRTGRASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAIT 565
L+KLRTGRASAGMLDHIIVETGG+KMPLSR+AVVSV+D KTLSVTPYD + LK+LE AI
Sbjct: 99 LSKLRTGRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDALKQLENAIV 158
Query: 566 SSPLGINPKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXXXX 745
SSPLG+NPK D +RLIA IPPLTKEH+QA+CKVVAKS EDVKQSIRRARQKALD +
Sbjct: 159 SSPLGLNPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALDMI---- 214
Query: 746 XXXXXXXXXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEITAG 895
GSS +D AKRLEKE+DE+TKKF+K AEDMC+ KEKEI G
Sbjct: 215 ------KKAGSSLPKDVAKRLEKEVDELTKKFVKSAEDMCKAKEKEIAEG 258
>emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]
Length = 258
Score = 293 bits (750), Expect = 1e-76
Identities = 170/290 (58%), Positives = 202/290 (69%), Gaps = 7/290 (2%)
Frame = +2
Query: 47 MAISVRRA-------LISCRNLSHLIRTTTFVPARHISHLASFSPYPCRYSRCAAIPSSS 205
MAISVRRA L+ CR+LSH+I + +++ S +P +SS
Sbjct: 1 MAISVRRAFSYRSILLLHCRHLSHIIHSP------NLTGSPSLNP-----------SASS 43
Query: 206 VMSFLSESRRGFAKGRRQTKFXXXXXXXXXGIATQKNIQSSVKATAISQMEAAVDALSRE 385
+ FL ESRRGFAKGR+ + +I +VK A+SQM+AAV ALSRE
Sbjct: 44 ALDFLRESRRGFAKGRKSKDSDAGNT-----VEVVPDIGPAVKENAMSQMDAAVVALSRE 98
Query: 386 LAKLRTGRASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAIT 565
L+KLRTGRASAGMLDHIIVETGG+KMPLSR+AVVSV+D KTLSVTPYD + LK+LE AI
Sbjct: 99 LSKLRTGRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLSVTPYDLDALKQLENAIV 158
Query: 566 SSPLGINPKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXXXX 745
SSPLG+NPK D +RLIA IPPLTKEH+QA+CKVVAKS EDVKQSIRRARQKALD +
Sbjct: 159 SSPLGLNPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQSIRRARQKALDXI---- 214
Query: 746 XXXXXXXXXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEITAG 895
GSS +D AKRLEKE+DE+TKKF+K AEDMC+ KEKEI G
Sbjct: 215 ------KKAGSSLPKDVAKRLEKEVDELTKKFVKSAEDMCKAKEKEIAEG 258
>ref|XP_002298606.1| hypothetical protein POPTR_0001s34130g [Populus trichocarpa]
gi|222845864|gb|EEE83411.1| hypothetical protein
POPTR_0001s34130g [Populus trichocarpa]
Length = 273
Score = 288 bits (737), Expect = 3e-75
Identities = 169/288 (58%), Positives = 205/288 (71%), Gaps = 5/288 (1%)
Frame = +2
Query: 47 MAISVRRALISCRN--LSHLIRTTTFVPARHISHLAS-FSPYPCRYSRCAAIPSSSVMSF 217
MA+ R IS RN L L +T+F AR S+ + FSP+ S +PS+++ SF
Sbjct: 1 MALLHLRRTISSRNSFLFLLRSSTSFTKARTFSNTTTLFSPHLLSNSVSHKLPSATLPSF 60
Query: 218 --LSESRRGFAKGRRQTKFXXXXXXXXXGIATQKNIQSSVKATAISQMEAAVDALSRELA 391
L +SRRGFAKG+ ++K G +I +VK TA SQM+AAV ALSREL
Sbjct: 61 DFLKQSRRGFAKGKNKSK-----DDSAGGTVEFVDIGPTVKETANSQMDAAVVALSRELQ 115
Query: 392 KLRTGRASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAITSS 571
KLRTGRASAGMLDHIIVET G+K+PL+R AVVSV+D+KTLSV PYDPNTLK+LE AI SS
Sbjct: 116 KLRTGRASAGMLDHIIVETDGVKLPLNRSAVVSVMDAKTLSVNPYDPNTLKQLENAIVSS 175
Query: 572 PLGINPKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXXXXXX 751
PLG+NP+ D RLIAAIPPLTKEH QA+CKVVAKS ED +QSIRRARQKA+D++
Sbjct: 176 PLGLNPQRDGDRLIAAIPPLTKEHTQAMCKVVAKSCEDCRQSIRRARQKAMDTV------ 229
Query: 752 XXXXXXXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEITAG 895
GSSF +D+AK+LEKEI+E+TKKF+K AEDMC KEKEI G
Sbjct: 230 ----KKAGSSFPKDDAKKLEKEIEEMTKKFVKSAEDMCNNKEKEIKTG 273
>ref|NP_186829.3| ribosome recycling factor [Arabidopsis thaliana]
gi|34146850|gb|AAQ62433.1| At3g01800 [Arabidopsis
thaliana] gi|51970776|dbj|BAD44080.1| putative ribosome
recycling factor [Arabidopsis thaliana]
gi|62319213|dbj|BAD94407.1| putative ribosome recycling
factor [Arabidopsis thaliana]
gi|332640195|gb|AEE73716.1| ribosome recycling factor
[Arabidopsis thaliana]
Length = 267
Score = 279 bits (714), Expect = 1e-72
Identities = 157/281 (55%), Positives = 196/281 (69%)
Frame = +2
Query: 47 MAISVRRALISCRNLSHLIRTTTFVPARHISHLASFSPYPCRYSRCAAIPSSSVMSFLSE 226
MA+ VRRAL S + L R++ V +R S ++S P S+ FL +
Sbjct: 2 MAMFVRRALSSRNAIGFLRRSSVVVQSRDFSFISS--PNLMMMGGRDLQFDLSMPDFLRD 59
Query: 227 SRRGFAKGRRQTKFXXXXXXXXXGIATQKNIQSSVKATAISQMEAAVDALSRELAKLRTG 406
SRRGFAKG++ + +I +VKA A SQMEAA+DALSR+L KLRTG
Sbjct: 60 SRRGFAKGKKSKDDSGTGM-----VDAAPDIGPTVKAAASSQMEAAIDALSRDLTKLRTG 114
Query: 407 RASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAITSSPLGIN 586
RA+ GMLDHI+VETGG+KMPL+ +A+VSV+D KTLSV PYDP+T+KELEKAI +SPLG+N
Sbjct: 115 RAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAIVASPLGLN 174
Query: 587 PKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXXXXXXXXXXX 766
PK D QRL+A+IP LTKEH+QA+CK+V KSSE VKQSIRRARQKALD++
Sbjct: 175 PKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTI----------K 224
Query: 767 XXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEIT 889
GSS +D KRLEKE+DE+TKKF+K AEDMC+ KEKEIT
Sbjct: 225 KAGSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEIT 265
>ref|XP_006447119.1| hypothetical protein CICLE_v10016267mg [Citrus clementina]
gi|568831536|ref|XP_006470018.1| PREDICTED:
ribosome-recycling factor, chloroplastic-like [Citrus
sinensis] gi|557549730|gb|ESR60359.1| hypothetical
protein CICLE_v10016267mg [Citrus clementina]
Length = 268
Score = 279 bits (713), Expect = 2e-72
Identities = 165/292 (56%), Positives = 196/292 (67%), Gaps = 9/292 (3%)
Frame = +2
Query: 47 MAISVRRALISCRNLSHLIRTTTFVPARHISHLASFSPYPC---------RYSRCAAIPS 199
MA+ +RRA IS RN + L+R + + S+ PC RYS PS
Sbjct: 1 MAMHLRRA-ISNRNATLLLRNGS----SSLQSQRSWFHTPCSRSNGFFRTRYSD----PS 51
Query: 200 SSVMSFLSESRRGFAKGRRQTKFXXXXXXXXXGIATQKNIQSSVKATAISQMEAAVDALS 379
S F+ RRGFAKG+R +I +VK T +SQMEAA+ ALS
Sbjct: 52 LSAFGFMQGCRRGFAKGKRSKD-----DSGAGSTVEIVDIGPTVKETTVSQMEAAIVALS 106
Query: 380 RELAKLRTGRASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKA 559
REL KLRTGRAS GMLDHIIVETGG+KMPL+ +AVVSV+DSKTLS+ PYDPNTLKELE A
Sbjct: 107 RELTKLRTGRASPGMLDHIIVETGGVKMPLNHLAVVSVLDSKTLSINPYDPNTLKELECA 166
Query: 560 ITSSPLGINPKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXX 739
I SSPLG+NP+ D QRLIAAIP LTKEH+QA+CKVVAK+SEDVKQSIRR+RQKALD M
Sbjct: 167 IVSSPLGLNPRVDGQRLIAAIPALTKEHIQAMCKVVAKTSEDVKQSIRRSRQKALDMM-- 224
Query: 740 XXXXXXXXXXXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEITAG 895
GSS +D KRLEKEIDE+TKK++K A+D+C+ KEKEI G
Sbjct: 225 --------KKAGSSLPKDQMKRLEKEIDELTKKYVKSADDICKAKEKEINEG 268
>dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis thaliana]
Length = 267
Score = 278 bits (712), Expect = 3e-72
Identities = 157/281 (55%), Positives = 196/281 (69%)
Frame = +2
Query: 47 MAISVRRALISCRNLSHLIRTTTFVPARHISHLASFSPYPCRYSRCAAIPSSSVMSFLSE 226
MA+ VRRAL S + L R++ V +R S ++S P S+ FL +
Sbjct: 2 MAMFVRRALSSRNAIGVLRRSSVVVQSRDFSFISS--PNLMMMGGRDLQFDLSMPDFLRD 59
Query: 227 SRRGFAKGRRQTKFXXXXXXXXXGIATQKNIQSSVKATAISQMEAAVDALSRELAKLRTG 406
SRRGFAKG++ + +I +VKA A SQMEAA+DALSR+L KLRTG
Sbjct: 60 SRRGFAKGKKSKDDSGTGM-----VDAAPDIGPTVKAAASSQMEAAIDALSRDLTKLRTG 114
Query: 407 RASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAITSSPLGIN 586
RA+ GMLDHI+VETGG+KMPL+ +A+VSV+D KTLSV PYDP+T+KELEKAI +SPLG+N
Sbjct: 115 RAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAIVASPLGLN 174
Query: 587 PKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXXXXXXXXXXX 766
PK D QRL+A+IP LTKEH+QA+CK+V KSSE VKQSIRRARQKALD++
Sbjct: 175 PKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTI----------K 224
Query: 767 XXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEIT 889
GSS +D KRLEKE+DE+TKKF+K AEDMC+ KEKEIT
Sbjct: 225 KAGSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEIT 265
>ref|XP_006408549.1| hypothetical protein EUTSA_v10021359mg [Eutrema salsugineum]
gi|557109695|gb|ESQ50002.1| hypothetical protein
EUTSA_v10021359mg [Eutrema salsugineum]
Length = 258
Score = 276 bits (705), Expect = 2e-71
Identities = 160/284 (56%), Positives = 198/284 (69%), Gaps = 3/284 (1%)
Frame = +2
Query: 47 MAISVRRALISCRNLSHLIRTTTFVPA--RHISHLAS-FSPYPCRYSRCAAIPSSSVMSF 217
MA+ VRRA I+ + L R+++ V R SH + FSP + P S+ F
Sbjct: 1 MAMLVRRARIA---IGFLRRSSSLVVVQRRDFSHNQTLFSPRDLQ-------PDLSLPHF 50
Query: 218 LSESRRGFAKGRRQTKFXXXXXXXXXGIATQKNIQSSVKATAISQMEAAVDALSRELAKL 397
L +SRRGFAK ++ T + +I SVK TA SQMEAA+DALSR+L KL
Sbjct: 51 LRDSRRGFAKSKKSTSVL---------VDVAPDIGPSVKETASSQMEAAIDALSRDLTKL 101
Query: 398 RTGRASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAITSSPL 577
RTGRA+ GMLDHIIVET G+KMPL+ +A+VSV+D KTLSV PYDP+TLKELEKAI SSPL
Sbjct: 102 RTGRAAPGMLDHIIVETEGVKMPLNHLALVSVLDPKTLSVNPYDPDTLKELEKAIVSSPL 161
Query: 578 GINPKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXXXXXXXX 757
G+NPK D QRL+A+IP LTKEH+QA+CK+V KSSE VKQSIRRARQKALD++
Sbjct: 162 GLNPKLDGQRLVASIPALTKEHVQAMCKIVTKSSEAVKQSIRRARQKALDTI-------- 213
Query: 758 XXXXXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEIT 889
GSS +D KRLEKE++E+TKKF+K AE+MC+ KEKEIT
Sbjct: 214 --RKAGSSLPKDEVKRLEKEVEELTKKFVKSAEEMCKSKEKEIT 255
>ref|XP_006298338.1| hypothetical protein CARUB_v10014408mg [Capsella rubella]
gi|482567047|gb|EOA31236.1| hypothetical protein
CARUB_v10014408mg [Capsella rubella]
Length = 265
Score = 270 bits (691), Expect = 7e-70
Identities = 153/281 (54%), Positives = 192/281 (68%)
Frame = +2
Query: 47 MAISVRRALISCRNLSHLIRTTTFVPARHISHLASFSPYPCRYSRCAAIPSSSVMSFLSE 226
MA+ VRRAL S R+ +R ++ V A + P A + FL +
Sbjct: 2 MAMLVRRALSSSRSTIGFLRRSSSVVALQSRDFSMMIGRPDSQLDLA------MPDFLRD 55
Query: 227 SRRGFAKGRRQTKFXXXXXXXXXGIATQKNIQSSVKATAISQMEAAVDALSRELAKLRTG 406
+RRGFAKG+ K + +I +VKA A SQMEAA+DALSR+L KLRTG
Sbjct: 56 ARRGFAKGK---KSRDDSSAATGMVDASPDIGPTVKAAASSQMEAAIDALSRDLTKLRTG 112
Query: 407 RASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAITSSPLGIN 586
RA+ GMLDHI+VETGG+KMPL+ +A+VSV+D KTLSV PYDP+T+KELEKAI SSPLG+N
Sbjct: 113 RAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAIVSSPLGLN 172
Query: 587 PKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXXXXXXXXXXX 766
PK D QRLIA+IP LTKEH+QA+CK+V KSSE VKQSIRRARQKALD++
Sbjct: 173 PKLDGQRLIASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTI----------K 222
Query: 767 XXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEIT 889
G S +D KRLEKE++E+TKK++K AE+MC+ KEKEIT
Sbjct: 223 KAGPSLPKDEVKRLEKEVEELTKKYVKSAEEMCKSKEKEIT 263
>ref|XP_004511047.1| PREDICTED: ribosome-recycling factor-like isoform X2 [Cicer
arietinum]
Length = 263
Score = 270 bits (690), Expect = 9e-70
Identities = 158/290 (54%), Positives = 194/290 (66%), Gaps = 7/290 (2%)
Frame = +2
Query: 47 MAISVRRALISCRNLSHLIRTTTFVPARHISHLASFSPYPCRYS----RCAAIPSSSVMS 214
MA + R + SCRNL L + H+ + SP C S R +P + +
Sbjct: 2 MAGYIVRRVFSCRNLFRLPNSAL--------HVCANSPIKCFVSDDTTRIFTLPETP--N 51
Query: 215 FLSESRRGFAKGRRQTKFXXXXXXXXXGIATQK---NIQSSVKATAISQMEAAVDALSRE 385
F+ ESRR FAKGR+ G+ T + N+ ++KATA SQMEAAV ALS E
Sbjct: 52 FIVESRRTFAKGRKSKD--------EGGVGTVEVPPNVGPNIKATAASQMEAAVAALSAE 103
Query: 386 LAKLRTGRASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAIT 565
L+KLRTGRASAGMLDHIIVETGG+KM L+R+A+VSV+D KTLSV PYDP TLK+LE AI
Sbjct: 104 LSKLRTGRASAGMLDHIIVETGGVKMALNRVALVSVLDPKTLSVNPYDPETLKQLENAIV 163
Query: 566 SSPLGINPKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXXXX 745
SSPLG+NPKTD RLIA IPPLTKEHMQA+ KVV KS ED +QSIRR+RQKA+D++
Sbjct: 164 SSPLGLNPKTDGDRLIAVIPPLTKEHMQAMNKVVTKSCEDTRQSIRRSRQKAMDAI---- 219
Query: 746 XXXXXXXXXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEITAG 895
S +D+ KRLEKE++++TKKFIK AED C+ KEKEIT G
Sbjct: 220 ------KKLNSVLPKDDIKRLEKEVEDLTKKFIKTAEDTCKAKEKEITQG 263
>ref|XP_004511046.1| PREDICTED: ribosome-recycling factor-like isoform X1 [Cicer
arietinum]
Length = 285
Score = 270 bits (690), Expect = 9e-70
Identities = 158/290 (54%), Positives = 194/290 (66%), Gaps = 7/290 (2%)
Frame = +2
Query: 47 MAISVRRALISCRNLSHLIRTTTFVPARHISHLASFSPYPCRYS----RCAAIPSSSVMS 214
MA + R + SCRNL L + H+ + SP C S R +P + +
Sbjct: 24 MAGYIVRRVFSCRNLFRLPNSAL--------HVCANSPIKCFVSDDTTRIFTLPETP--N 73
Query: 215 FLSESRRGFAKGRRQTKFXXXXXXXXXGIATQK---NIQSSVKATAISQMEAAVDALSRE 385
F+ ESRR FAKGR+ G+ T + N+ ++KATA SQMEAAV ALS E
Sbjct: 74 FIVESRRTFAKGRKSKD--------EGGVGTVEVPPNVGPNIKATAASQMEAAVAALSAE 125
Query: 386 LAKLRTGRASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAIT 565
L+KLRTGRASAGMLDHIIVETGG+KM L+R+A+VSV+D KTLSV PYDP TLK+LE AI
Sbjct: 126 LSKLRTGRASAGMLDHIIVETGGVKMALNRVALVSVLDPKTLSVNPYDPETLKQLENAIV 185
Query: 566 SSPLGINPKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXXXX 745
SSPLG+NPKTD RLIA IPPLTKEHMQA+ KVV KS ED +QSIRR+RQKA+D++
Sbjct: 186 SSPLGLNPKTDGDRLIAVIPPLTKEHMQAMNKVVTKSCEDTRQSIRRSRQKAMDAI---- 241
Query: 746 XXXXXXXXXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEITAG 895
S +D+ KRLEKE++++TKKFIK AED C+ KEKEIT G
Sbjct: 242 ------KKLNSVLPKDDIKRLEKEVEDLTKKFIKTAEDTCKAKEKEITQG 285
>ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus communis]
gi|223549449|gb|EEF50937.1| ribosome recycling factor,
putative [Ricinus communis]
Length = 262
Score = 270 bits (690), Expect = 9e-70
Identities = 152/286 (53%), Positives = 198/286 (69%), Gaps = 3/286 (1%)
Frame = +2
Query: 47 MAISVRRALISCRNLSHLIRTTTFVPARHISHLASFSPYPCRYSRCAAIPSSSVM---SF 217
MA+ +RRA+ S +++ L+R+ + +S + R C S+ + +F
Sbjct: 1 MAVYLRRAMASKNSMTTLLRSY---------YSSSNNMIQGRNVFCNCKAQSNFIPRCNF 51
Query: 218 LSESRRGFAKGRRQTKFXXXXXXXXXGIATQKNIQSSVKATAISQMEAAVDALSRELAKL 397
L +SRRGFAKG++ + +I +VK +A QMEAA+ +LSREL KL
Sbjct: 52 LIDSRRGFAKGKKSKD-----DSGGGTVQVTPDIGPAVKESAALQMEAAIVSLSRELTKL 106
Query: 398 RTGRASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAITSSPL 577
RTGRASAGMLDHIIVET G+KMPL+R+AVV+V+D KTLSV PYDPN + LEKAI SSPL
Sbjct: 107 RTGRASAGMLDHIIVETDGVKMPLNRLAVVAVMDPKTLSVNPYDPNMVSALEKAIVSSPL 166
Query: 578 GINPKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXXXXXXXX 757
G+NP+ D +RLIA+IPPLTKEHMQA+CKVV KS E+VKQS+RRARQKALD++
Sbjct: 167 GLNPRVDGERLIASIPPLTKEHMQAMCKVVGKSCEEVKQSVRRARQKALDTI-------- 218
Query: 758 XXXXXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEITAG 895
GS+ S+D+ KRLEKE+DE+TKKF+K AED+C+ KEKEIT G
Sbjct: 219 --KKAGSNLSKDDVKRLEKEVDELTKKFVKSAEDICKAKEKEITVG 262
>gb|ESW05716.1| hypothetical protein PHAVU_011G203500g [Phaseolus vulgaris]
Length = 261
Score = 269 bits (687), Expect = 2e-69
Identities = 145/246 (58%), Positives = 182/246 (73%), Gaps = 3/246 (1%)
Frame = +2
Query: 167 CRYSRCAAIPSSSVMSFLSESRRGFAKGRRQTKFXXXXXXXXXGIAT---QKNIQSSVKA 337
C SR +IP++ +F++ESRR +AKGR+ G++T N+ ++KA
Sbjct: 35 CDSSRVFSIPTTP--NFVAESRRAYAKGRKSR-------GDEGGVSTIDVPPNVGPTIKA 85
Query: 338 TAISQMEAAVDALSRELAKLRTGRASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSV 517
A+SQMEAA+ ALS EL+KLRTGRAS GMLDHIIVET G+KMPL+R+AVVSV+D KTLSV
Sbjct: 86 NAVSQMEAAMAALSAELSKLRTGRASPGMLDHIIVETSGLKMPLNRLAVVSVLDPKTLSV 145
Query: 518 TPYDPNTLKELEKAITSSPLGINPKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQS 697
PYDP TLK+LE AI SSPLG+NPK+D +RLIA IPPLTKEHMQA+ KVVAKS ED +QS
Sbjct: 146 NPYDPETLKQLENAIVSSPLGLNPKSDGERLIAVIPPLTKEHMQAMTKVVAKSCEDARQS 205
Query: 698 IRRARQKALDSMXXXXXXXXXXXXXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKE 877
IRRARQKA+D++ S +D+ KRLEKE+D++TKKFIK AED+C+ KE
Sbjct: 206 IRRARQKAMDAIKKLY----------SGLPKDDIKRLEKEVDDLTKKFIKTAEDVCKAKE 255
Query: 878 KEITAG 895
KE+T G
Sbjct: 256 KEVTQG 261
>gb|EMJ17040.1| hypothetical protein PRUPE_ppa010230mg [Prunus persica]
Length = 258
Score = 267 bits (683), Expect = 6e-69
Identities = 155/282 (54%), Positives = 196/282 (69%)
Frame = +2
Query: 47 MAISVRRALISCRNLSHLIRTTTFVPARHISHLASFSPYPCRYSRCAAIPSSSVMSFLSE 226
MAI +RRAL S RN+ L+R++ V R + S +P I S S + F+ E
Sbjct: 1 MAIFLRRAL-SFRNVL-LLRSSAIV-GRELFQYNSEAPQ--------RILSHSALEFVKE 49
Query: 227 SRRGFAKGRRQTKFXXXXXXXXXGIATQKNIQSSVKATAISQMEAAVDALSRELAKLRTG 406
SRRGFAKGR ++K I N+ ++KA SQMEAA+ ALS EL+KLRTG
Sbjct: 50 SRRGFAKGRNKSK----DDSAAGTIEVLPNMGPTIKANTTSQMEAAITALSAELSKLRTG 105
Query: 407 RASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAITSSPLGIN 586
RAS GMLDHIIVETGG+K+PLS++AVVSV+DSKTLS+ P+DPN L++LE AI S LG+N
Sbjct: 106 RASPGMLDHIIVETGGVKLPLSQIAVVSVLDSKTLSINPFDPNALQKLETAIVESALGLN 165
Query: 587 PKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXXXXXXXXXXX 766
PK D RLIAAIPPLTKEH+QAVCKVV KS ED + SIRRARQKA+D++
Sbjct: 166 PKVDGDRLIAAIPPLTKEHVQAVCKVVTKSCEDGRLSIRRARQKAMDTIKKLY------- 218
Query: 767 XXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEITA 892
S + +D+ KRLEKE++E+TKKF+K AED+C+ KEKEI+A
Sbjct: 219 ---SRYPKDDLKRLEKEVEELTKKFVKTAEDLCKAKEKEISA 257
>ref|XP_003627922.1| Ribosome-recycling factor [Medicago truncatula]
gi|355521944|gb|AET02398.1| Ribosome-recycling factor
[Medicago truncatula]
Length = 262
Score = 266 bits (681), Expect = 1e-68
Identities = 155/284 (54%), Positives = 193/284 (67%), Gaps = 5/284 (1%)
Frame = +2
Query: 59 VRRALISCRNLSHLIRTTTFVPARHISHLASFSP--YPCRYSRCAAIPSSSVMSFLSESR 232
VRRA CRNL L H+ SP + A+ S + +F+ ESR
Sbjct: 6 VRRAF-GCRNLFRLPTCAL--------HVCENSPVKFCMTDDTTRAVISPPMPNFIVESR 56
Query: 233 RGFAKGRRQTKFXXXXXXXXXGIATQK---NIQSSVKATAISQMEAAVDALSRELAKLRT 403
R FAKGR+ G++T + N+ ++KA+A SQMEAA+ ALS EL+KLRT
Sbjct: 57 RAFAKGRKSKD--------EGGVSTAEVPPNVGPNIKASASSQMEAAMTALSVELSKLRT 108
Query: 404 GRASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAITSSPLGI 583
GRASAGMLDHIIVETGG+KMPLSR+A+VSV+D KTLSV PYDP TLK+LE AI SSPLG+
Sbjct: 109 GRASAGMLDHIIVETGGVKMPLSRIALVSVLDPKTLSVNPYDPETLKQLENAIVSSPLGL 168
Query: 584 NPKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXXXXXXXXXX 763
NP+TD +RLIA IPPLTKEHMQA+ K+V KS ED +QSIRRARQKA+D++
Sbjct: 169 NPRTDGERLIAVIPPLTKEHMQAMNKLVTKSCEDTRQSIRRARQKAMDAI---------- 218
Query: 764 XXXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEITAG 895
S +D+ KRLEKE+D++TKKFIK AED+C+ KEKEI+ G
Sbjct: 219 KKLNSILPKDDLKRLEKEVDDLTKKFIKTAEDVCKAKEKEISQG 262
>gb|AFK48535.1| unknown [Medicago truncatula]
Length = 263
Score = 263 bits (672), Expect = 1e-67
Identities = 153/284 (53%), Positives = 192/284 (67%), Gaps = 5/284 (1%)
Frame = +2
Query: 59 VRRALISCRNLSHLIRTTTFVPARHISHLASFSP--YPCRYSRCAAIPSSSVMSFLSESR 232
VRRA CRNL L H+ SP + A+ S + +F+ ESR
Sbjct: 7 VRRAF-GCRNLFRLPTCAL--------HVRENSPVKFCMTDDTTRAVISPPMPNFIVESR 57
Query: 233 RGFAKGRRQTKFXXXXXXXXXGIATQK---NIQSSVKATAISQMEAAVDALSRELAKLRT 403
R FAKGR+ G++T + N+ ++KA+A SQMEAA+ ALS EL+KLRT
Sbjct: 58 RAFAKGRKSKD--------EGGVSTAEVPPNVGPNIKASASSQMEAAMTALSVELSKLRT 109
Query: 404 GRASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAITSSPLGI 583
GRA+AGMLDHIIVETGG+KMPLSR+A+VSV+D KTLSV PYDP TLK+LE AI SSPLG+
Sbjct: 110 GRAAAGMLDHIIVETGGVKMPLSRIALVSVLDPKTLSVNPYDPETLKQLENAIVSSPLGL 169
Query: 584 NPKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRRARQKALDSMXXXXXXXXXX 763
NP+TD +RLIA IPPLTKEHMQA+ K+V K ED +QSIRRARQKA+D++
Sbjct: 170 NPRTDGERLIAVIPPLTKEHMQAMNKLVTKPCEDTRQSIRRARQKAMDAI---------- 219
Query: 764 XXXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEITAG 895
S +D+ KRLEKE+D++TKKFIK AED+C+ KEKEI+ G
Sbjct: 220 KKLNSILPKDDLKRLEKEVDDLTKKFIKTAEDVCKAKEKEISQG 263
>ref|NP_001242099.1| uncharacterized protein LOC100814905 [Glycine max]
gi|255644392|gb|ACU22701.1| unknown [Glycine max]
Length = 261
Score = 262 bits (670), Expect = 2e-67
Identities = 141/243 (58%), Positives = 178/243 (73%)
Frame = +2
Query: 167 CRYSRCAAIPSSSVMSFLSESRRGFAKGRRQTKFXXXXXXXXXGIATQKNIQSSVKATAI 346
C +R +P++ +F++ESRR FAKGR+ I N ++KA A+
Sbjct: 36 CDSNRVLTLPATP--NFVAESRRAFAKGRKSKD-----EGGASTIEVPPNAGPTIKANAV 88
Query: 347 SQMEAAVDALSRELAKLRTGRASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPY 526
SQMEAA+ ALS EL+KLRTGRAS GMLDHIIVET G+KMPL+R+AVVSV+D KTLSV PY
Sbjct: 89 SQMEAAMAALSTELSKLRTGRASPGMLDHIIVETSGLKMPLNRLAVVSVLDPKTLSVNPY 148
Query: 527 DPNTLKELEKAITSSPLGINPKTDNQRLIAAIPPLTKEHMQAVCKVVAKSSEDVKQSIRR 706
DP TLK+LE AI SSPLG+NPK+D +RLIA IPPLTKEHMQA+ K+VAKS ED +QSIRR
Sbjct: 149 DPETLKQLENAIVSSPLGLNPKSDGERLIAVIPPLTKEHMQAMTKLVAKSCEDARQSIRR 208
Query: 707 ARQKALDSMXXXXXXXXXXXXXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEI 886
ARQ+A+D++ SS +D+ KRLEKE+D++TKKFIK A+D+C+ KEKEI
Sbjct: 209 ARQQAMDAIKKLY----------SSLPKDDIKRLEKEVDDLTKKFIKSAKDICKAKEKEI 258
Query: 887 TAG 895
+ G
Sbjct: 259 SQG 261
>gb|AAF03454.1|AC010797_30 putative ribosome recycling factor [Arabidopsis thaliana]
Length = 284
Score = 259 bits (663), Expect = 1e-66
Identities = 153/299 (51%), Positives = 193/299 (64%), Gaps = 18/299 (6%)
Frame = +2
Query: 47 MAISVRRALISCRNLSHLIRTTTFVPARHISHLASFSPYPCRYSRCAAIPSSSVMSFLSE 226
MA+ VRRAL S + L R++ V +R S ++S P S+ FL +
Sbjct: 1 MAMFVRRALSSRNAIGFLRRSSVVVQSRDFSFISS--PNLMMMGGRDLQFDLSMPDFLRD 58
Query: 227 SRRGFAKGRRQTKFXXXXXXXXXGIATQKNIQSSVKATAISQMEAAVDALSRELAKLRTG 406
SRRGFAKG++ + +I +VKA A SQMEAA+DALSR+L KLRTG
Sbjct: 59 SRRGFAKGKKSKDDSGTGM-----VDAAPDIGPTVKAAASSQMEAAIDALSRDLTKLRTG 113
Query: 407 RASAGMLDHIIVETGGIKMPLSRMAVVSVIDSKTLSVTPYDPNTLKELEKAITSSPLGIN 586
RA+ GMLDHI+VETGG+KMPL+ +A+VSV+D KTLSV PYDP+T+KELEKAI +SPLG+N
Sbjct: 114 RAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAIVASPLGLN 173
Query: 587 PKTDNQRLIAAIP------------------PLTKEHMQAVCKVVAKSSEDVKQSIRRAR 712
PK D QRL+A+IP P+ +QA+CK+V KSSE VKQSIRRAR
Sbjct: 174 PKLDGQRLVASIPAYESSSLSNFISLRLSLDPIYLYELQAMCKIVTKSSEVVKQSIRRAR 233
Query: 713 QKALDSMXXXXXXXXXXXXXGSSFSEDNAKRLEKEIDEITKKFIKLAEDMCRGKEKEIT 889
QKALD++ GSS +D KRLEKE+DE+TKKF+K AEDMC+ KEKEIT
Sbjct: 234 QKALDTI----------KKAGSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEIT 282