BLASTX nr result

ID: Rauwolfia21_contig00009767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00009767
         (5387 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308172.1| predicted protein [Populus trichocarpa]            60   2e-06
emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   8e-06

>ref|XP_002308172.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score = 59.7 bits (143), Expect(2) = 2e-06
 Identities = 28/71 (39%), Positives = 39/71 (54%)
 Frame = +2

Query: 4919 PSRASMFLWLARHGKLLTNQLLFRRGICDCETSSCPICLTEEETVLHALLHSSWAKQLWK 5098
            P +  +F W+A   K+ T  +L RRGI D   ++CPICL EEE+V H LLH      +W 
Sbjct: 351  PPKVEVFCWMAIIKKINTRSMLVRRGILDISAAACPICLAEEESVDHILLHCHKHWIVWS 410

Query: 5099 TGTTWFIQLFC 5131
                W+   +C
Sbjct: 411  KIINWWGLAWC 421



 Score = 22.3 bits (46), Expect(2) = 2e-06
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 5205 FKKREWKYVFREAIRTIWGHGNRLIF 5282
            F+K+ W  +      ++W H N +IF
Sbjct: 441  FQKKAWLMLLFSVAWSLWLHRNDVIF 466


>emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1379

 Score = 60.5 bits (145), Expect = 8e-06
 Identities = 30/85 (35%), Positives = 46/85 (54%)
 Frame = +2

Query: 4919 PSRASMFLWLARHGKLLTNQLLFRRGICDCETSSCPICLTEEETVLHALLHSSWAKQLWK 5098
            P R  +F+W A  GK+ T   L   GI   E SSCP+C +  ET  H LLH  +A+++W 
Sbjct: 1056 PHRIEIFVWSAMIGKINTRHKLATYGIIPVEDSSCPMCNSTPETSDHLLLHCLFAQRIW- 1114

Query: 5099 TGTTWFIQLFCRSFILPIECQNCID 5173
               TW++ L+   ++ P+  +   D
Sbjct: 1115 ---TWWLDLWSIKWVFPMSLRMAFD 1136


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