BLASTX nr result
ID: Rauwolfia21_contig00009527
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00009527
(1022 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub... 94 7e-17
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub... 89 2e-15
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 88 6e-15
ref|XP_002308049.1| predicted protein [Populus trichocarpa] 88 6e-15
gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Th... 87 1e-14
gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Th... 87 1e-14
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise... 84 9e-14
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 77 8e-12
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 77 8e-12
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera] 77 8e-12
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub... 77 1e-11
gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus... 77 1e-11
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub... 76 2e-11
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr... 76 2e-11
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 75 4e-11
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub... 75 4e-11
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub... 75 5e-11
gb|EMJ04262.1| hypothetical protein PRUPE_ppa000153mg [Prunus pe... 74 1e-10
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps... 72 3e-10
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub... 70 1e-09
>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
lycopersicum]
Length = 1677
Score = 94.4 bits (233), Expect = 7e-17
Identities = 51/110 (46%), Positives = 70/110 (63%)
Frame = +2
Query: 2 VANCVSQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCL 181
V CVS+LELIAKGDVV A+ +DA + ++ + S + T D V D +C
Sbjct: 112 VEKCVSELELIAKGDVVGAKMIDALSPDNSTDREESEGS--HMSCTMDDLNVRD---HCE 166
Query: 182 ENNERSWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHM 331
N SWD+FQFTEAM+V+++ LK++ C NC+A NP+I+KP FG FHM
Sbjct: 167 YNKRPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHM 216
>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
tuberosum]
Length = 1675
Score = 89.4 bits (220), Expect = 2e-15
Identities = 49/110 (44%), Positives = 68/110 (61%)
Frame = +2
Query: 2 VANCVSQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCL 181
V CVS+LELIAKGDVV A+ +DA + ++ + S + D + D Y
Sbjct: 112 VEKCVSELELIAKGDVVGAKMIDALSPDNSTDREESEGS--HMSCAMDDLNMQDHREY-- 167
Query: 182 ENNERSWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHM 331
N SWD+FQFTEAM+V+++ LK++ C NC+A NP+I+KP FG FHM
Sbjct: 168 -NKRPSWDNFQFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHM 216
>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
polymerase I largest subunit, putative [Ricinus
communis]
Length = 1686
Score = 87.8 bits (216), Expect = 6e-15
Identities = 47/109 (43%), Positives = 59/109 (54%)
Frame = +2
Query: 2 VANCVSQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCL 181
V C+ QLELI KGD+V A+RL++ + LS ++ DG
Sbjct: 120 VEKCIKQLELIVKGDIVGAKRLESVSPSEALYPEESDLSHESCPTIHSGVQCNDGE---- 175
Query: 182 ENNERSWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFH 328
++ W S QFTEAMSVLN FLK + C NCE+ NP I KP FGWFH
Sbjct: 176 HTRQQGWTSLQFTEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFH 224
>ref|XP_002308049.1| predicted protein [Populus trichocarpa]
Length = 1168
Score = 87.8 bits (216), Expect = 6e-15
Identities = 53/114 (46%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Frame = +2
Query: 2 VANCVSQLELIAKGDVVEARRLDA-SLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YC 178
V VSQLELI KGDVV A+RLD+ S IE +L + + +T++ G +
Sbjct: 115 VEKFVSQLELIIKGDVVGAKRLDSFSPIEA-------SLPEDSDGSSESCSTIHSGARH- 166
Query: 179 LENNERS----WDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFH 328
NNE+S W S Q +EAMS+LN FLK C NC A NP I+KP FGWFH
Sbjct: 167 -PNNEQSKQSEWTSLQLSEAMSILNNFLKLESKKCKNCSASNPNIRKPTFGWFH 219
>gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
Length = 1689
Score = 87.0 bits (214), Expect = 1e-14
Identities = 45/110 (40%), Positives = 60/110 (54%)
Frame = +2
Query: 2 VANCVSQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCL 181
V CVSQL+LI GD+V A+RLD+ + +N S ++ ++ V
Sbjct: 117 VERCVSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESGSIVHNSEAV-------- 168
Query: 182 ENNERSWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHM 331
+ W S Q EAMSVLN FLK + + C NC+A NP I KP+FGW HM
Sbjct: 169 --KPKEWTSLQLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHM 216
>gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
Length = 1665
Score = 87.0 bits (214), Expect = 1e-14
Identities = 45/110 (40%), Positives = 60/110 (54%)
Frame = +2
Query: 2 VANCVSQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCL 181
V CVSQL+LI GD+V A+RLD+ + +N S ++ ++ V
Sbjct: 117 VERCVSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESGSIVHNSEAV-------- 168
Query: 182 ENNERSWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHM 331
+ W S Q EAMSVLN FLK + + C NC+A NP I KP+FGW HM
Sbjct: 169 --KPKEWTSLQLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHM 216
>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
Length = 1626
Score = 84.0 bits (206), Expect = 9e-14
Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Frame = +2
Query: 2 VANCVSQLELIAKGDVVEARRLDA--SLIETEKNKVWNALSVKNKKRTSDATTVYDGT*Y 175
V CVSQL LI KGD+ ARRL + L + + + ++ + + D +
Sbjct: 110 VETCVSQLHLIRKGDIAGARRLRSLGGLSDNQGSHSTGSVVLSESESGQDLN-------W 162
Query: 176 CLENNERSWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHMVFVV 343
C RSWDS Q TEAM VLN+F + + C NCE+ +P+I PIFGWF+ V+ +
Sbjct: 163 C-----RSWDSIQLTEAMGVLNEFFRKKEKKCKNCESRSPKITNPIFGWFYAVYAI 213
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 77.4 bits (189), Expect = 8e-12
Identities = 46/110 (41%), Positives = 64/110 (58%)
Frame = +2
Query: 2 VANCVSQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCL 181
V VSQLELI+KGDVV A+ LD S+ +E + ++ ++ ++ D L
Sbjct: 117 VQKYVSQLELISKGDVVGAKNLD-SISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHL 175
Query: 182 ENNERSWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHM 331
+ E W S Q EAMSV++ FLK + C NC+A +PQ+ KP FGWFHM
Sbjct: 176 KQQE--WTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHM 223
>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
vinifera]
Length = 1740
Score = 77.4 bits (189), Expect = 8e-12
Identities = 46/110 (41%), Positives = 64/110 (58%)
Frame = +2
Query: 2 VANCVSQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCL 181
V VSQLELI+KGDVV A+ LD S+ +E + ++ ++ ++ D L
Sbjct: 166 VQKYVSQLELISKGDVVGAKNLD-SISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHL 224
Query: 182 ENNERSWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHM 331
+ E W S Q EAMSV++ FLK + C NC+A +PQ+ KP FGWFHM
Sbjct: 225 KQQE--WTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHM 272
>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
Length = 1350
Score = 77.4 bits (189), Expect = 8e-12
Identities = 46/110 (41%), Positives = 64/110 (58%)
Frame = +2
Query: 2 VANCVSQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCL 181
V VSQLELI+KGDVV A+ LD S+ +E + ++ ++ ++ D L
Sbjct: 186 VQKYVSQLELISKGDVVGAKNLD-SISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHL 244
Query: 182 ENNERSWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHM 331
+ E W S Q EAMSV++ FLK + C NC+A +PQ+ KP FGWFHM
Sbjct: 245 KQQE--WTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHM 292
>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
max]
Length = 1651
Score = 76.6 bits (187), Expect = 1e-11
Identities = 42/105 (40%), Positives = 56/105 (53%)
Frame = +2
Query: 17 SQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCLENNER 196
SQLELI KGD++ A+RL++ + K ++ + D + Y E
Sbjct: 122 SQLELIMKGDIIRAKRLESII----PGKSVDSFNPDESIHPGDGD---ESQCYSAEQLGE 174
Query: 197 SWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHM 331
+W S QF+EAMSVL K L + C C A NP+I KP FGWFHM
Sbjct: 175 NWTSLQFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHM 219
>gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
Length = 1637
Score = 76.6 bits (187), Expect = 1e-11
Identities = 42/105 (40%), Positives = 56/105 (53%)
Frame = +2
Query: 17 SQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCLENNER 196
SQ ELI KGD++ A+ LD S+I E N + + ++ +
Sbjct: 122 SQFELIMKGDIIRAKSLD-SIISDESNHSGDGDESQGVEQLGE----------------- 163
Query: 197 SWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHM 331
+W S QF+EAMSVL KFL + C NC +NP+I KP FGWFHM
Sbjct: 164 NWSSLQFSEAMSVLRKFLLRKYKKCQNCGVVNPRISKPTFGWFHM 208
>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
sinensis]
Length = 1715
Score = 76.3 bits (186), Expect = 2e-11
Identities = 43/110 (39%), Positives = 54/110 (49%)
Frame = +2
Query: 2 VANCVSQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCL 181
V CV +LELI KGD++ A+ LD L N + +S K+ YD
Sbjct: 117 VEKCVRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKSSCSMVTPRGNYDNV---R 173
Query: 182 ENNERSWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHM 331
+ W S QF EA L +FLK C NC+A NP+I KP FGW HM
Sbjct: 174 NLKPQEWTSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHM 223
>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
gi|557523327|gb|ESR34694.1| hypothetical protein
CICLE_v10004132mg [Citrus clementina]
Length = 1715
Score = 76.3 bits (186), Expect = 2e-11
Identities = 43/110 (39%), Positives = 54/110 (49%)
Frame = +2
Query: 2 VANCVSQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCL 181
V CV +LELI KGD++ A+ LD L N + +S K+ YD
Sbjct: 117 VEKCVRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKSSCSMVTPRGNYDNV---R 173
Query: 182 ENNERSWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHM 331
+ W S QF EA L +FLK C NC+A NP+I KP FGW HM
Sbjct: 174 NLKPQEWTSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHM 223
>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
subunit RPA1-like [Cucumis sativus]
Length = 1652
Score = 75.1 bits (183), Expect = 4e-11
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 VANCVSQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCL 181
V NC + LELI G++ +A+ L+ W + +K RT + ++Y Y
Sbjct: 123 VENCKTLLELILDGEIAKAKELEEE---------W----MNSKSRTKSSHSMYT---YER 166
Query: 182 ENNE-RSWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHM 331
+N + +W S QF+EA+SV+ KFLK + C C A +P+I KP FGWFHM
Sbjct: 167 KNGQPETWTSLQFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHM 217
>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
sativus]
Length = 1650
Score = 75.1 bits (183), Expect = 4e-11
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 VANCVSQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCL 181
V NC + LELI G++ +A+ L+ W + +K RT + ++Y Y
Sbjct: 117 VENCKTLLELILDGEIAKAKELEEE---------W----MNSKSRTKSSHSMYT---YER 160
Query: 182 ENNE-RSWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHM 331
+N + +W S QF+EA+SV+ KFLK + C C A +P+I KP FGWFHM
Sbjct: 161 KNGQPETWTSLQFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHM 211
>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
arietinum]
Length = 1650
Score = 74.7 bits (182), Expect = 5e-11
Identities = 43/105 (40%), Positives = 57/105 (54%)
Frame = +2
Query: 17 SQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCLENNER 196
+QLELI KG++ +A+ LDA ++ + LS N + S E
Sbjct: 122 NQLELIMKGNIAKAKNLDAINLDESAD-----LSDGNDSQCSSD-----------EQLGE 165
Query: 197 SWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHM 331
+W S QF+EAMSVL KFLK C NC +NP+I KP FGWFH+
Sbjct: 166 NWTSLQFSEAMSVLRKFLKKEFRKCQNCGNINPKITKPTFGWFHV 210
>gb|EMJ04262.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
Length = 1612
Score = 73.6 bits (179), Expect = 1e-10
Identities = 41/107 (38%), Positives = 57/107 (53%)
Frame = +2
Query: 14 VSQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCLENNE 193
VSQL+LI KGDV+ A+RL++ + + + N ++ +
Sbjct: 124 VSQLKLIMKGDVLGAKRLESDSPSEYSDCNGSGNHIDN------------------DSKQ 165
Query: 194 RSWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHMV 334
+ W S QFTE MSVL+K L + C NC+A NP+I KP FGWF MV
Sbjct: 166 QGWTSLQFTEIMSVLDKALPTHGKECKNCKAKNPKISKPTFGWFQMV 212
>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
gi|482559195|gb|EOA23386.1| hypothetical protein
CARUB_v10016563mg [Capsella rubella]
Length = 1651
Score = 72.4 bits (176), Expect = 3e-10
Identities = 37/110 (33%), Positives = 57/110 (51%)
Frame = +2
Query: 2 VANCVSQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCL 181
V CVSQL+LI KGD+V A++L+ T N +S ++ + D
Sbjct: 119 VKKCVSQLKLIMKGDIVSAKQLEVKSDSTSTNSEDIEVSCESGVTNDSSQECEDP----- 173
Query: 182 ENNERSWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHM 331
+ ++ W S QF E +V+ F+K C C+A NP+++KP+FGW M
Sbjct: 174 DMEDQRWTSLQFAEVTAVMKNFMKLTSKECNKCKAKNPKLEKPMFGWVRM 223
>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
arietinum]
Length = 1660
Score = 70.1 bits (170), Expect = 1e-09
Identities = 40/105 (38%), Positives = 52/105 (49%)
Frame = +2
Query: 17 SQLELIAKGDVVEARRLDASLIETEKNKVWNALSVKNKKRTSDATTVYDGT*YCLENNER 196
+QLELI KG++ +A+ LD N ++D D E
Sbjct: 122 NQLELIMKGNIAKAKNLDEI----------------NLDESADLCDGDDSQCSSAEQLGE 165
Query: 197 SWDSFQFTEAMSVLNKFLKSRPHTCPNCEAMNPQIKKPIFGWFHM 331
+W S QF+EAMSVL KFLK C NC +NP+I P FGWFH+
Sbjct: 166 NWTSLQFSEAMSVLRKFLKKEYRKCQNCGYINPKITIPTFGWFHV 210