BLASTX nr result

ID: Rauwolfia21_contig00009446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00009446
         (611 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004229106.1| PREDICTED: zinc finger protein VAR3, chlorop...    79   1e-12
ref|XP_006337986.1| PREDICTED: zinc finger protein VAR3, chlorop...    79   1e-12
ref|XP_002268494.2| PREDICTED: zinc finger protein VAR3, chlorop...    73   5e-11
emb|CBI31208.3| unnamed protein product [Vitis vinifera]               73   5e-11
gb|EPS73463.1| hypothetical protein M569_01294, partial [Genlise...    73   7e-11
gb|ESW33895.1| hypothetical protein PHAVU_001G107100g [Phaseolus...    57   3e-06
ref|XP_002530944.1| hypothetical protein RCOM_0844850 [Ricinus c...    56   7e-06

>ref|XP_004229106.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Solanum
           lycopersicum]
          Length = 874

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 54/142 (38%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
 Frame = -2

Query: 415 ASRFITLLTAPFPSLLH--RPSSLIFLRPLTRRLSVATCPSHFTLSIPNSSRRLLHT--L 248
           ASRFI+LL  PFP+ L+  R  S + LR L       T  SH  +S  + S++  H   +
Sbjct: 2   ASRFISLLGTPFPTFLNHLRCPSFLHLRRLACGSRRFTAYSHPHISPLSPSQQQFHAQPI 61

Query: 247 HCNALQETSLNTTKNVPHQWPEWSNLITRLFSQGQGFPPTEAHGLLSEDAFVAYEEKELS 68
           + N   ++S +++    H WPEW +LIT L    Q  P  E       D+FV YEE  LS
Sbjct: 62  NNNTPLDSSSSSSSFTSHPWPEWRSLITLLTGNDQLPPAVE-----DSDSFVTYEE--LS 114

Query: 67  DEFLQCASACLAFARSQPDLLG 2
            +FL+ A+ CL FAR +P+ +G
Sbjct: 115 QDFLRAATLCLDFARERPNFIG 136


>ref|XP_006337986.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Solanum
           tuberosum]
          Length = 869

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 55/141 (39%), Positives = 77/141 (54%), Gaps = 3/141 (2%)
 Frame = -2

Query: 415 ASRFITLLTAPFPSLLH--RPSSLIFLRPLTRRLSVATCPSHFTLSIPNSSRRLLHTLHC 242
           ASRFI+LL  PFP+ L+  R  S + LR L       T  SH  +S  + S++  H    
Sbjct: 2   ASRFISLLATPFPTFLNHLRRPSFLHLRRLACGFRRFTVYSHSHISPLSPSQQQFHAQPI 61

Query: 241 NALQETSLNTTKN-VPHQWPEWSNLITRLFSQGQGFPPTEAHGLLSEDAFVAYEEKELSD 65
           N    T L+++ +   H WPEW +LIT L    Q  PP        ED+FVAYE+  LS 
Sbjct: 62  N--NNTPLDSSSSFTSHPWPEWRSLITLLTGNDQ-LPPAV------EDSFVAYED--LSQ 110

Query: 64  EFLQCASACLAFARSQPDLLG 2
           +FL+ A+ CL FA+ +P+ +G
Sbjct: 111 DFLRAATLCLDFAQERPNFIG 131


>ref|XP_002268494.2| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Vitis
           vinifera]
          Length = 879

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 63/160 (39%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
 Frame = -2

Query: 424 MGGASRFITLLTAPFPSLLHRPSSLIFLRPLTRRLSVATCPSHFTLSIPNSSRRL----- 260
           MGGA+RF+ LL  PFP L  RPS    L  L RR SV +   H  LS   S RRL     
Sbjct: 1   MGGATRFLMLLATPFPILHPRPS----LLHLARR-SVLSLSPHLYLS-ATSRRRLRFSIT 54

Query: 259 ----LHTLHCNALQET----------SLNTTKNVPHQWPEWSNLITRLFSQGQGFPPTEA 122
               LHT H  A   T          S   +    H WPEWS L+  L + G       A
Sbjct: 55  ASDHLHT-HAAAAASTRDDYLGDPFVSSPNSSRTWHPWPEWSRLVESLNAGGD-----IA 108

Query: 121 HGLLSEDAFVAYEEKELSDEFLQCASACLAFARSQPDLLG 2
                +DAFV  E + L DEF++ A ACL F R+ P+ LG
Sbjct: 109 RAPSDDDAFV--ESEGLPDEFVRAAIACLGFGRNNPNALG 146


>emb|CBI31208.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 63/160 (39%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
 Frame = -2

Query: 424 MGGASRFITLLTAPFPSLLHRPSSLIFLRPLTRRLSVATCPSHFTLSIPNSSRRL----- 260
           MGGA+RF+ LL  PFP L  RPS    L  L RR SV +   H  LS   S RRL     
Sbjct: 1   MGGATRFLMLLATPFPILHPRPS----LLHLARR-SVLSLSPHLYLS-ATSRRRLRFSIT 54

Query: 259 ----LHTLHCNALQET----------SLNTTKNVPHQWPEWSNLITRLFSQGQGFPPTEA 122
               LHT H  A   T          S   +    H WPEWS L+  L + G       A
Sbjct: 55  ASDHLHT-HAAAAASTRDDYLGDPFVSSPNSSRTWHPWPEWSRLVESLNAGGD-----IA 108

Query: 121 HGLLSEDAFVAYEEKELSDEFLQCASACLAFARSQPDLLG 2
                +DAFV  E + L DEF++ A ACL F R+ P+ LG
Sbjct: 109 RAPSDDDAFV--ESEGLPDEFVRAAIACLGFGRNNPNALG 146


>gb|EPS73463.1| hypothetical protein M569_01294, partial [Genlisea aurea]
          Length = 294

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 55/140 (39%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
 Frame = -2

Query: 412 SRFITLLTAPFPSLLHRPSSLIFLRPLTRRLSVATCPSHFTLSIPNSSRRLLHTLHCNAL 233
           +RFI+LL+APFP L  RPS L+FL       S+              S  LL ++H   L
Sbjct: 1   ARFISLLSAPFPPL--RPS-LVFLHRCFSGSSLRLLALPSPSGARARSSPLLKSIHSQPL 57

Query: 232 QE-TSLNTTKNVP---HQWPEWSNLITRLFSQGQGFPPTEAHGLLSEDAFVAYEEKELSD 65
              TS   T   P   H WPEW+  +  L S   G P  + + +  ED FV YEE  L D
Sbjct: 58  SSNTSYEYTSPAPPPPHPWPEWTYFLNSL-SARWGVP--DDYRIPLEDEFVVYEE--LPD 112

Query: 64  EFLQCASACLAFARSQPDLL 5
           +F++ AS+C+AF+R++PDLL
Sbjct: 113 DFVRVASSCIAFSRARPDLL 132


>gb|ESW33895.1| hypothetical protein PHAVU_001G107100g [Phaseolus vulgaris]
          Length = 820

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
 Frame = -2

Query: 421 GGASRFITLLTAPFPSLL----HRPSSLIFLRPLTRRLSVATCPSHFTLSIPNSSRRLLH 254
           G A RF+ LL  P P L     HR  +L+ L   + RLS  + PS F+ S      +L  
Sbjct: 3   GVAPRFLFLLATPLPLLRRNHHHRHRNLLLLSSHSLRLS--SSPSSFSFSSSPLPLKL-- 58

Query: 253 TLHCNALQETSLNTTKNVPHQWPEWSNLITRLFSQGQGFPPTEAHGLLSEDAFVAYEEKE 74
                A Q +SL+++      WPE+S+ ++ + S G           L +DAF A  +  
Sbjct: 59  ----RASQGSSLSSSP-----WPEYSSFLSHISSSGY-------LSSLPDDAFTAAAQ-H 101

Query: 73  LSDEFLQCASACLAFARSQPDLL 5
           LS  FL+ A+ CLAFAR +P+LL
Sbjct: 102 LSYSFLRDATTCLAFARDRPNLL 124


>ref|XP_002530944.1| hypothetical protein RCOM_0844850 [Ricinus communis]
           gi|223529459|gb|EEF31416.1| hypothetical protein
           RCOM_0844850 [Ricinus communis]
          Length = 916

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 51/160 (31%), Positives = 66/160 (41%), Gaps = 20/160 (12%)
 Frame = -2

Query: 424 MGGASRFITLLT-----APFPSLLH----RPSSLIFLRPLTRRL----------SVATCP 302
           MGGA+RF+ LLT     AP P LLH    R  SL+ L    R+L          S    P
Sbjct: 1   MGGATRFLMLLTTTTATAPSPFLLHHYHHRIPSLLRLSRHRRQLLHSLSHYHHNSSLCLP 60

Query: 301 SHFTLSIPNSSRRLLHTLHCNALQETSLNTTKNVP-HQWPEWSNLITRLFSQGQGFPPTE 125
               +      ++ LHT      Q  SL      P H W EWSN I  L   G      E
Sbjct: 61  GPLKIKASQQQQQQLHT------QTASLTRAAGWPVHPWAEWSNFINNLSISGYFNRQIE 114

Query: 124 AHGLLSEDAFVAYEEKELSDEFLQCASACLAFARSQPDLL 5
                 +D  +  +   L + F+   +AC AF+R +P LL
Sbjct: 115 ID---EDDELIITDGVNLPEHFICAVNACSAFSREKPHLL 151


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