BLASTX nr result

ID: Rauwolfia21_contig00008982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00008982
         (698 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004295376.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    61   4e-07
ref|XP_006453535.1| hypothetical protein CICLE_v10008279mg [Citr...    57   6e-06
ref|XP_006453534.1| hypothetical protein CICLE_v10008279mg [Citr...    57   6e-06
ref|XP_004305029.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g...    56   1e-05

>ref|XP_004295376.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At5g22670-like
           [Fragaria vesca subsp. vesca]
          Length = 439

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 39/123 (31%), Positives = 57/123 (46%)
 Frame = +2

Query: 17  YDITESLPELTNLRELEFKFKRNLEPSVLCLNAFIHASPHLQKLVLKYESTENTRFWREF 196
           Y+  +  P L+NLR LE K   + E  +     FI ASP+L +LVLK    + TR     
Sbjct: 314 YNQKDVFPILSNLRHLELKLDSHCEDDIPNFKRFIEASPYLHRLVLKLHKCKRTR----- 368

Query: 197 MRYPYVPGLKANKGQLPWKCKHQYLKEVEFFGWDRLEVYFDLLKHVIEIATSLERITVDP 376
                 PG K  K     +    YLK VE  G+     + +L  + +  A +LE++ +DP
Sbjct: 369 ------PGYKCRKMGRISRFPRDYLKVVEIVGYRGTHCHDELALYFVMEAAALEKLVIDP 422

Query: 377 CYR 385
             R
Sbjct: 423 VRR 425


>ref|XP_006453535.1| hypothetical protein CICLE_v10008279mg [Citrus clementina]
           gi|568840214|ref|XP_006474065.1| PREDICTED: putative
           FBD-associated F-box protein At5g53635-like [Citrus
           sinensis] gi|557556761|gb|ESR66775.1| hypothetical
           protein CICLE_v10008279mg [Citrus clementina]
          Length = 448

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 1/156 (0%)
 Frame = +2

Query: 41  ELTNLRELEFKFKRNLEPSVLCLNAFIHASPHLQKLVLKYESTENTRFWREFMRYPYVPG 220
           EL  LR L F        S+L L+  + AS  LQK  LK ++              YV  
Sbjct: 310 ELPKLRHLTFNVLAFSSKSLLGLSCMMEASTFLQKFTLKLQTV-------------YVGS 356

Query: 221 LKANKGQLPWKCKHQYLKEVEFFGWDRLEVYFDLLKHVIEIATSLERITVDPCYRHDLVS 400
              ++ +    C HQ+LK VE  G+  L +  +L  ++++ AT+LE++ VDP     L +
Sbjct: 357 EIVSERKFR-DCLHQHLKVVELIGFVGLPIELELAFYLLKSATTLEKMIVDPTPPAVLGT 415

Query: 401 MTSLTD-EENQVARALAKQLEPVLEVLSRRTELVIL 505
                + ++ Q AR+ AK+LEP    + +  ELVIL
Sbjct: 416 PWEFENYKKKQAARSCAKELEP---KIPKGVELVIL 448


>ref|XP_006453534.1| hypothetical protein CICLE_v10008279mg [Citrus clementina]
           gi|557556760|gb|ESR66774.1| hypothetical protein
           CICLE_v10008279mg [Citrus clementina]
          Length = 381

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 1/156 (0%)
 Frame = +2

Query: 41  ELTNLRELEFKFKRNLEPSVLCLNAFIHASPHLQKLVLKYESTENTRFWREFMRYPYVPG 220
           EL  LR L F        S+L L+  + AS  LQK  LK ++              YV  
Sbjct: 243 ELPKLRHLTFNVLAFSSKSLLGLSCMMEASTFLQKFTLKLQTV-------------YVGS 289

Query: 221 LKANKGQLPWKCKHQYLKEVEFFGWDRLEVYFDLLKHVIEIATSLERITVDPCYRHDLVS 400
              ++ +    C HQ+LK VE  G+  L +  +L  ++++ AT+LE++ VDP     L +
Sbjct: 290 EIVSERKFR-DCLHQHLKVVELIGFVGLPIELELAFYLLKSATTLEKMIVDPTPPAVLGT 348

Query: 401 MTSLTD-EENQVARALAKQLEPVLEVLSRRTELVIL 505
                + ++ Q AR+ AK+LEP    + +  ELVIL
Sbjct: 349 PWEFENYKKKQAARSCAKELEP---KIPKGVELVIL 381


>ref|XP_004305029.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g53840-like [Fragaria
           vesca subsp. vesca]
          Length = 572

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 7/157 (4%)
 Frame = +2

Query: 35  LPELTNLRELEFKFKRNLEPSVLCLNAFIHASPHLQKLVLKYESTENTRFWREFMRYPYV 214
           LP   NL+ LE   K      +L L AF+ A P+L KLVLK+  T +  + R+ M     
Sbjct: 415 LPTYVNLKHLELGLKERDNCCLLQLRAFMKACPYLHKLVLKFARTISLGYRRK-MEIKQA 473

Query: 215 PGLKANKGQLPWKCKHQYLKEVEFFGWDRLEVYFDLLKHVIEIATSLERITVDPCYR-HD 391
           P           K  H++L+EVE   +      F L+K+++E A  L+++ + P    + 
Sbjct: 474 P-----------KYSHKFLREVEVVEYHDRTGDFQLVKYLLENAVELKKLVIHPVGEWYS 522

Query: 392 LVSM-----TSLTDEENQVARALAKQLEP-VLEVLSR 484
            + M     T  T+EE + A    K+L P  LE + R
Sbjct: 523 RLRMLRKYGTRDTEEEREQATERLKELVPSTLEFICR 559


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