BLASTX nr result

ID: Rauwolfia21_contig00008963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00008963
         (564 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343913.1| PREDICTED: uncharacterized protein LOC102605...    99   9e-19
ref|XP_004245558.1| PREDICTED: uncharacterized protein LOC101244...    83   5e-14
gb|EMJ10519.1| hypothetical protein PRUPE_ppa007988mg [Prunus pe...    61   2e-07
ref|XP_004298847.1| PREDICTED: uncharacterized protein LOC101297...    60   4e-07
ref|XP_002276929.1| PREDICTED: uncharacterized protein LOC100250...    60   5e-07

>ref|XP_006343913.1| PREDICTED: uncharacterized protein LOC102605715 [Solanum tuberosum]
          Length = 372

 Score = 98.6 bits (244), Expect = 9e-19
 Identities = 58/124 (46%), Positives = 79/124 (63%), Gaps = 1/124 (0%)
 Frame = +2

Query: 170 MNSIAPFTRRLRVF-HPGPETNLMLSSTLSNCIHSFPRRPLLITSTPLIWDSKFAQRIQS 346
           M SI+PF+ ++R F     + +LMLSS   NC HSFP+RPLL TS+P    S F+ +  S
Sbjct: 1   MYSISPFSHKIRAFCDNNSQISLMLSS---NCTHSFPQRPLLSTSSPRFRVSTFSPK--S 55

Query: 347 LAPVTRSFRASEPHCRPSAKKWKIFCFRHDEFSSGKTTPEFAGEEVLSDELQKSEIEKPR 526
           L  ++   R SEPH R S K+WKI CFR++E SSG + PE + ++VL  EL+  EI+KP 
Sbjct: 56  LPTLSHRIRISEPHHRISTKRWKISCFRNEESSSGASNPE-SIDDVLHKELENPEIDKPS 114

Query: 527 AGNR 538
              R
Sbjct: 115 VQKR 118


>ref|XP_004245558.1| PREDICTED: uncharacterized protein LOC101244021 [Solanum
           lycopersicum]
          Length = 369

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 54/124 (43%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
 Frame = +2

Query: 170 MNSIAPFTRRLRVFHPGP-ETNLMLSSTLSNCIHSFPRRPLLITSTPLIWDSKFAQRIQS 346
           M SI+PF  ++R F     + +LMLSS   NC HSFP   LL  S+P    S F  +  S
Sbjct: 1   MYSISPFPHKIRAFCDNKRQISLMLSS---NCTHSFP---LLSNSSPRFRVSTFCPK--S 52

Query: 347 LAPVTRSFRASEPHCRPSAKKWKIFCFRHDEFSSGKTTPEFAGEEVLSDELQKSEIEKPR 526
           L  ++   R SEPH R S K+WKI CFR++E SSG + PE + ++ L  EL+  EI+KP 
Sbjct: 53  LPTLSHRIRISEPHHRISTKRWKISCFRNEESSSGSSNPE-SIDDFLHKELKNPEIDKPS 111

Query: 527 AGNR 538
              R
Sbjct: 112 VEKR 115


>gb|EMJ10519.1| hypothetical protein PRUPE_ppa007988mg [Prunus persica]
          Length = 349

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
 Frame = +2

Query: 236 MLSSTLSNCIHSFPRRPLLITSTPLIWDSKFAQRIQSLAPVTRSFRASEPHCRPSAKKW- 412
           MLSST   C HS  RRP L +  P    ++ + R  +L P++RSFR  E H RPS+ +W 
Sbjct: 1   MLSST---CSHSLIRRPFLQSPAP---KTRVSTRPGALYPISRSFRIFESHSRPSSTRWT 54

Query: 413 KIFCFRHDEFSSGKTTPEFAG----EEVLSDELQKSEIEK 520
           +I CFR +  SS     ++ G    EEV+  E   S++ K
Sbjct: 55  RISCFRQENSSSETPKADYIGHLVPEEVVKSEFDDSKVVK 94


>ref|XP_004298847.1| PREDICTED: uncharacterized protein LOC101297145 [Fragaria vesca
           subsp. vesca]
          Length = 349

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = +2

Query: 236 MLSSTLSNCIHSFPRRPLLITSTPLIWDSKFAQRIQSLAPVTRSFRASEPHCRPSAKKW- 412
           MLSST   C H+   RP L +S P    +K   R   L P++RS R SE H RP + +W 
Sbjct: 1   MLSST---CSHALLHRPFLPSSIPR---AKAPTRPGGLYPISRSLRISESHSRPFSTRWR 54

Query: 413 KIFCFRHDEFSSGKTTPEFAGEEVLSDELQKSEIE 517
           KI CFR +EFSS     E+ G  ++ +E+ K E +
Sbjct: 55  KISCFRQEEFSSETQKAEYIG-HLVPEEVVKPEFD 88


>ref|XP_002276929.1| PREDICTED: uncharacterized protein LOC100250094 [Vitis vinifera]
           gi|297742264|emb|CBI34413.3| unnamed protein product
           [Vitis vinifera]
          Length = 347

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 35/90 (38%), Positives = 49/90 (54%)
 Frame = +2

Query: 254 SNCIHSFPRRPLLITSTPLIWDSKFAQRIQSLAPVTRSFRASEPHCRPSAKKWKIFCFRH 433
           S+C H+  R P L    P I   +   R  +L P++  FR SE H +    KWKI CFRH
Sbjct: 3   SSCSHALSRCPSL---PPTISRLRLPNRPGTLYPLSSGFRISESHSKFPKSKWKISCFRH 59

Query: 434 DEFSSGKTTPEFAGEEVLSDELQKSEIEKP 523
           ++ SS +T    + +++LS EL K E  KP
Sbjct: 60  ED-SSSETPKSESIDDILSGELVKPEFNKP 88


Top