BLASTX nr result
ID: Rauwolfia21_contig00008851
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rauwolfia21_contig00008851 (1182 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 306 8e-81 gb|EOY23975.1| RNA-binding family protein isoform 1 [Theobroma c... 305 2e-80 emb|CBI33876.3| unnamed protein product [Vitis vinifera] 298 2e-78 gb|EOY23976.1| RNA-binding family protein isoform 2 [Theobroma c... 288 4e-75 ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ri... 280 8e-73 ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 277 5e-72 ref|XP_006428430.1| hypothetical protein CICLE_v10012439mg [Citr... 275 3e-71 ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 273 1e-70 ref|XP_006410699.1| hypothetical protein EUTSA_v10016986mg [Eutr... 271 5e-70 ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 270 6e-70 ref|XP_006352864.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 270 8e-70 gb|EMJ10617.1| hypothetical protein PRUPE_ppa009362mg [Prunus pe... 270 8e-70 ref|XP_002326529.1| predicted protein [Populus trichocarpa] gi|5... 269 2e-69 gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides] 268 4e-69 gb|EXB32996.1| 31 kDa ribonucleoprotein [Morus notabilis] 265 3e-68 ref|XP_006294626.1| hypothetical protein CARUB_v10023663mg [Caps... 264 6e-68 ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arab... 261 4e-67 ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein... 259 1e-66 ref|XP_004301780.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 253 8e-65 gb|AFK48727.1| unknown [Lotus japonicus] 244 4e-62 >ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis vinifera] Length = 288 Score = 306 bits (785), Expect = 8e-81 Identities = 169/266 (63%), Positives = 199/266 (74%), Gaps = 6/266 (2%) Frame = -2 Query: 1142 MAVIEAAFSIISASCPPTFTKLPLCPQPSHPITLHMRISSLYPSI--KSPPYSFRLLRVE 969 MA +EA+ SI S + +KL +P ++LH S+ PSI K P Y LL Sbjct: 1 MAALEASLSIFSLYRSSS-SKLLFSHRPPPSMSLHS--SAFIPSICLKYPLYPLPLLYTN 57 Query: 968 RTRKPRFHVYSAVGDVAVEEKTEKSLESNQKRKLFVLNLPWSFSVADIKNLFGECGTVVD 789 T K F + S+V ++ VE K E++ E NQKRKLFVLNLPWS SV DIKNLFGECGTV D Sbjct: 58 PTTKFSFELCSSVQEIEVEAKPEQTQEPNQKRKLFVLNLPWSLSVVDIKNLFGECGTVTD 117 Query: 788 VEIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFAKRFKRPA---HSP 618 VEIIK KDG++RG+AFVTM SG+EAQAV+ KFDS+ELSGRIIRVEFAKRFK+P+ P Sbjct: 118 VEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSPPPPPP 177 Query: 617 PADSSLRETRHKLYLSNLAWKVRSNHLRDFFSA-FNLVSARVVFDSPSGRSAGYGFVSFA 441 PA ETRHKLY+SNLAWKVRS HLR+FFS+ FN VS RVVFDSPSGRS GYGF SFA Sbjct: 178 PAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFASFA 237 Query: 440 TKEEAESALAALDGKELLSRPIRLKF 363 TKEEAE+A++ALDGKEL+ RP+ LKF Sbjct: 238 TKEEAEAAISALDGKELMGRPVHLKF 263 >gb|EOY23975.1| RNA-binding family protein isoform 1 [Theobroma cacao] Length = 281 Score = 305 bits (781), Expect = 2e-80 Identities = 157/261 (60%), Positives = 201/261 (77%), Gaps = 1/261 (0%) Frame = -2 Query: 1142 MAVIEAAFSIISASCPPTFTKLPLCPQPSHPITLHMRISSLYPSIKSPPYSFRLLRVERT 963 MA +EA + + CP + +K LCP+P+ L IS + S +SF + + + Sbjct: 1 MAAVEAVAGLSFSRCPSSSSKSLLCPKPTR---LSCLISGISKSASILSHSFFISSLTNS 57 Query: 962 RK-PRFHVYSAVGDVAVEEKTEKSLESNQKRKLFVLNLPWSFSVADIKNLFGECGTVVDV 786 RK P F + S V +V VE +TEK+ +SN KRKLFVLNLPWS++VADIK+LFG+CG V DV Sbjct: 58 RKKPGFLLCSTVQEVNVEAETEKTQKSNVKRKLFVLNLPWSYTVADIKDLFGQCGNVTDV 117 Query: 785 EIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFAKRFKRPAHSPPADS 606 EIIK KDG++R FAFVTMASG+EAQA ++K DSHE+S RIIRVEFA+RFK+P+ SP Sbjct: 118 EIIKQKDGRSRNFAFVTMASGEEAQAAVDKLDSHEVSARIIRVEFARRFKKPSPSPQPIV 177 Query: 605 SLRETRHKLYLSNLAWKVRSNHLRDFFSAFNLVSARVVFDSPSGRSAGYGFVSFATKEEA 426 RET HKLY+SNLAWKVRS+HLR+FFSAFN V+ARV+F +PSG+SAGYGFVSFATKEEA Sbjct: 178 PPRETHHKLYVSNLAWKVRSSHLREFFSAFNPVAARVIFGTPSGQSAGYGFVSFATKEEA 237 Query: 425 ESALAALDGKELLSRPIRLKF 363 ++A++ L+GKEL+ RP+RLKF Sbjct: 238 DAAISTLNGKELMDRPLRLKF 258 >emb|CBI33876.3| unnamed protein product [Vitis vinifera] Length = 258 Score = 298 bits (764), Expect = 2e-78 Identities = 157/233 (67%), Positives = 182/233 (78%), Gaps = 6/233 (2%) Frame = -2 Query: 1043 LHMRISSLYPSI--KSPPYSFRLLRVERTRKPRFHVYSAVGDVAVEEKTEKSLESNQKRK 870 + + S+ PSI K P Y LL T K F + S+V ++ VE K E++ E NQKRK Sbjct: 1 MSLHSSAFIPSICLKYPLYPLPLLYTNPTTKFSFELCSSVQEIEVEAKPEQTQEPNQKRK 60 Query: 869 LFVLNLPWSFSVADIKNLFGECGTVVDVEIIKHKDGKNRGFAFVTMASGDEAQAVINKFD 690 LFVLNLPWS SV DIKNLFGECGTV DVEIIK KDG++RG+AFVTM SG+EAQAV+ KFD Sbjct: 61 LFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFD 120 Query: 689 SHELSGRIIRVEFAKRFKRPA---HSPPADSSLRETRHKLYLSNLAWKVRSNHLRDFFSA 519 S+ELSGRIIRVEFAKRFK+P+ PPA ETRHKLY+SNLAWKVRS HLR+FFS+ Sbjct: 121 SYELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSS 180 Query: 518 -FNLVSARVVFDSPSGRSAGYGFVSFATKEEAESALAALDGKELLSRPIRLKF 363 FN VS RVVFDSPSGRS GYGF SFATKEEAE+A++ALDGKEL+ RP+ LKF Sbjct: 181 NFNPVSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKF 233 >gb|EOY23976.1| RNA-binding family protein isoform 2 [Theobroma cacao] Length = 248 Score = 288 bits (736), Expect = 4e-75 Identities = 149/250 (59%), Positives = 191/250 (76%), Gaps = 1/250 (0%) Frame = -2 Query: 1142 MAVIEAAFSIISASCPPTFTKLPLCPQPSHPITLHMRISSLYPSIKSPPYSFRLLRVERT 963 MA +EA + + CP + +K LCP+P+ L IS + S +SF + + + Sbjct: 1 MAAVEAVAGLSFSRCPSSSSKSLLCPKPTR---LSCLISGISKSASILSHSFFISSLTNS 57 Query: 962 RK-PRFHVYSAVGDVAVEEKTEKSLESNQKRKLFVLNLPWSFSVADIKNLFGECGTVVDV 786 RK P F + S V +V VE +TEK+ +SN KRKLFVLNLPWS++VADIK+LFG+CG V DV Sbjct: 58 RKKPGFLLCSTVQEVNVEAETEKTQKSNVKRKLFVLNLPWSYTVADIKDLFGQCGNVTDV 117 Query: 785 EIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFAKRFKRPAHSPPADS 606 EIIK KDG++R FAFVTMASG+EAQA ++K DSHE+S RIIRVEFA+RFK+P+ SP Sbjct: 118 EIIKQKDGRSRNFAFVTMASGEEAQAAVDKLDSHEVSARIIRVEFARRFKKPSPSPQPIV 177 Query: 605 SLRETRHKLYLSNLAWKVRSNHLRDFFSAFNLVSARVVFDSPSGRSAGYGFVSFATKEEA 426 RET HKLY+SNLAWKVRS+HLR+FFSAFN V+ARV+F +PSG+SAGYGFVSFATKEEA Sbjct: 178 PPRETHHKLYVSNLAWKVRSSHLREFFSAFNPVAARVIFGTPSGQSAGYGFVSFATKEEA 237 Query: 425 ESALAALDGK 396 ++A++ L+GK Sbjct: 238 DAAISTLNGK 247 >ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis] gi|223532973|gb|EEF34739.1| ribonucleoprotein, chloroplast, putative [Ricinus communis] Length = 278 Score = 280 bits (716), Expect = 8e-73 Identities = 153/262 (58%), Positives = 195/262 (74%), Gaps = 2/262 (0%) Frame = -2 Query: 1142 MAVIEAAFSIISASCPPTFTKLPLCPQPSHPITLHMRISSLYPSIKSPPYSFRLLRVERT 963 MA +EAA S+ P + +K L P + R +S+ P + ++F L + T Sbjct: 1 MAAMEAAVSLFLPH-PSSSSKSLLSPTFINLFKHKCRSNSI-PLLS---HNFSLSNIHLT 55 Query: 962 -RKPRFHVYSAVGDVAVEEKTEKSLESNQKRKLFVLNLPWSFSVADIKNLFGECGTVVDV 786 RK F +S ++ + E+T+ E+ QKRKL+V NLPWS SV DIKNLFG+CGTV DV Sbjct: 56 ARKLSFERFSTAQEIMIPEETQ---ETTQKRKLYVFNLPWSLSVVDIKNLFGQCGTVTDV 112 Query: 785 EIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFAKRFKRPAHSPPADS 606 EIIK K+G++RGFAFVT+ASG+EAQA I+K DSHE+SGRIIRVEFAKR K P+ P + Sbjct: 113 EIIKQKNGRSRGFAFVTLASGEEAQAAIDKLDSHEVSGRIIRVEFAKRLKPPSPPSPTGT 172 Query: 605 SLRETRHKLYLSNLAWKVRSNHLRDFFSA-FNLVSARVVFDSPSGRSAGYGFVSFATKEE 429 S RETRHK+Y+SNLAWKVRS HLR+FFS F+ VS+RVVFDSP+GRS+GYGFVSFAT+EE Sbjct: 173 SARETRHKIYVSNLAWKVRSTHLREFFSTNFSPVSSRVVFDSPTGRSSGYGFVSFATREE 232 Query: 428 AESALAALDGKELLSRPIRLKF 363 AE+A++ALDGKEL+ RP+RLKF Sbjct: 233 AEAAISALDGKELMGRPLRLKF 254 >ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum lycopersicum] Length = 285 Score = 277 bits (709), Expect = 5e-72 Identities = 160/265 (60%), Positives = 193/265 (72%), Gaps = 5/265 (1%) Frame = -2 Query: 1142 MAVIEAAFSIISASCPPT--FTKLPLCPQPSHPITLHMRISSLYPSIKSPPYSFRLLRVE 969 MA IE A S I +S P + + K PL P + I L SL S+KS Y L + Sbjct: 1 MAAIELAASSIFSSPPSSSSYLKFPLFP---NSIKLQNYNHSLNLSLKSILYPLPLPSRK 57 Query: 968 RTRKPRFHVYSAVGDVAV-EEKTEKSLESNQKRKLFVLNLPWSFSVADIKNLFGECGTVV 792 + + V V EEKTEK ++NQ+RKLFVLNLPWS +VADIKN+F ECG V Sbjct: 58 QCTQLHCSAVEVTEPVTVQEEKTEKPQKNNQRRKLFVLNLPWSLTVADIKNIFAECGIVD 117 Query: 791 DVEIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFAKRFKRPAHSPPA 612 DVEIIK KDGK+RGFAFVTM+SG+EAQA I+K DS+E+SGRIIRVEFAKRFK+P +PP Sbjct: 118 DVEIIKTKDGKSRGFAFVTMSSGEEAQAAIDKLDSYEVSGRIIRVEFAKRFKKPPGAPPP 177 Query: 611 DSSLR-ETRHKLYLSNLAWKVRSNHLRDFFSA-FNLVSARVVFDSPSGRSAGYGFVSFAT 438 + + E RHKLY+SNLAWKVRS LR+FFSA N +SARVVFD+ SGR+AGYGFV+F T Sbjct: 178 STPPQGEARHKLYVSNLAWKVRSTQLREFFSANNNPISARVVFDNASGRAAGYGFVTFDT 237 Query: 437 KEEAESALAALDGKELLSRPIRLKF 363 KE+AE+AL+ALDGKEL+ RPIRLKF Sbjct: 238 KEQAEAALSALDGKELMGRPIRLKF 262 >ref|XP_006428430.1| hypothetical protein CICLE_v10012439mg [Citrus clementina] gi|567871683|ref|XP_006428431.1| hypothetical protein CICLE_v10012439mg [Citrus clementina] gi|567871685|ref|XP_006428432.1| hypothetical protein CICLE_v10012439mg [Citrus clementina] gi|568877400|ref|XP_006491727.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like isoform X1 [Citrus sinensis] gi|568877402|ref|XP_006491728.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like isoform X2 [Citrus sinensis] gi|568877404|ref|XP_006491729.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like isoform X3 [Citrus sinensis] gi|557530487|gb|ESR41670.1| hypothetical protein CICLE_v10012439mg [Citrus clementina] gi|557530488|gb|ESR41671.1| hypothetical protein CICLE_v10012439mg [Citrus clementina] gi|557530489|gb|ESR41672.1| hypothetical protein CICLE_v10012439mg [Citrus clementina] Length = 275 Score = 275 bits (703), Expect = 3e-71 Identities = 153/268 (57%), Positives = 188/268 (70%), Gaps = 8/268 (2%) Frame = -2 Query: 1142 MAVIEAAFSII-------SASCPPTFTKLPLCPQPSHPITLHMRISSLYPSIKSPPYSFR 984 MA +EAA + I S SC F KLP C I L+ S +P + Sbjct: 1 MAALEAAATSIFLTNYPFSFSC--LFPKLPHC------------IKLLHSSNSTPSLIYN 46 Query: 983 LLRVERTRKPRFHVYSAVGDVAVEEKTEKSLESNQKRKLFVLNLPWSFSVADIKNLFGEC 804 TR V S + D V+ K E++ + N +RK++V NLPWSFSVA+IKNLF C Sbjct: 47 F----PTRNVCLQVCSTLQDTTVQTKPEQTQKQNIRRKIYVFNLPWSFSVAEIKNLFAPC 102 Query: 803 GTVVDVEIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFAKRFKRPAH 624 GTVVDVEIIKHK GKNR FAFVTMAS +EAQA +N+FD+ E+SGRIIRVEFAK+FK+P Sbjct: 103 GTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFAKKFKKPRP 162 Query: 623 SPPADSSLRETRHKLYLSNLAWKVRSNHLRDFFSA-FNLVSARVVFDSPSGRSAGYGFVS 447 A + RET+HKLY+SNL+WKVRS HLR+FFSA FN VS++VVF+S GRSAGYGFVS Sbjct: 163 QRSASAPARETQHKLYVSNLSWKVRSTHLREFFSANFNPVSSKVVFESNEGRSAGYGFVS 222 Query: 446 FATKEEAESALAALDGKELLSRPIRLKF 363 FATKEEAE+A+++LDGKEL+ RP+RLKF Sbjct: 223 FATKEEAEAAISSLDGKELMGRPLRLKF 250 >ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis sativus] Length = 288 Score = 273 bits (698), Expect = 1e-70 Identities = 154/269 (57%), Positives = 192/269 (71%), Gaps = 9/269 (3%) Frame = -2 Query: 1142 MAVIEAAFSIIS----ASCPPTFTKLPLCPQPSHPITLHMRISS----LYPSIKSPPYSF 987 M IE+ IIS +S + +KL PS PI L + SS L P+ P SF Sbjct: 1 MVTIESPLPIISPYISSSSSSSASKLCFNKLPS-PIKLRISFSSPLLSLNPTTPISPTSF 59 Query: 986 RLLRVERTRKPRFHVYSAVGDVAVEEKTEKSLESNQKRKLFVLNLPWSFSVADIKNLFGE 807 R R + SA+ +V +EE +E++ + NQKRKL++ NLPWS SV DIK LFG+ Sbjct: 60 NS---SRNRGGGARLCSALQEVTLEEASEENQDVNQKRKLYIFNLPWSLSVVDIKELFGQ 116 Query: 806 CGTVVDVEIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFAKRFKRPA 627 CGTV DVEIIK K+G++RGFAFVTMAS DEAQA I KFDS E+SGR+I+VEFAKR K+P Sbjct: 117 CGTVSDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPP 176 Query: 626 HSPPADSSLRETRHKLYLSNLAWKVRSNHLRDFFSA-FNLVSARVVFDSPSGRSAGYGFV 450 P ET +KLY+SNLAWKVRSN+LRDFFS FN ++ARVVFDSP+GRSAGYGFV Sbjct: 177 PPKPPGPPPGETVNKLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFV 236 Query: 449 SFATKEEAESALAALDGKELLSRPIRLKF 363 SFAT+EEA++AL++L+GKEL+ RP+RLKF Sbjct: 237 SFATREEAQTALSSLEGKELMGRPLRLKF 265 >ref|XP_006410699.1| hypothetical protein EUTSA_v10016986mg [Eutrema salsugineum] gi|557111868|gb|ESQ52152.1| hypothetical protein EUTSA_v10016986mg [Eutrema salsugineum] Length = 306 Score = 271 bits (692), Expect = 5e-70 Identities = 151/265 (56%), Positives = 186/265 (70%), Gaps = 5/265 (1%) Frame = -2 Query: 1142 MAVIEAAFSIISASCPPTFTKLPLCPQPSHPITLHMRISSLYPSIKSPPYSFRLLRVERT 963 MA++EAA SI+S S + +K L + S P L +RI S + S+ S Sbjct: 1 MALLEAALSILSFSSSSS-SKPYLFSRQSKPAALSLRIPSNFSSVFSLNVPLGSAGFNSR 59 Query: 962 RKPRFHVYSAVGDVAVEEKTEKSLESNQKRKLFVLNLPWSFSVADIKNLFGECGTVVDVE 783 R + + +EKTE++ +SNQKRKLFV NLPWS SV DI LFG+CG V +VE Sbjct: 60 RLVSVLCSVTEEETSPDEKTEETQKSNQKRKLFVFNLPWSMSVNDISELFGQCGMVYNVE 119 Query: 782 IIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFAKRFKRPAHSPP---A 612 IIK KDGKNRGFAFVTMASG++AQA I+K D+ ++SGRIIRV FAKRFK+P PP Sbjct: 120 IIKQKDGKNRGFAFVTMASGEDAQAAIDKLDTFQVSGRIIRVNFAKRFKKPTPKPPNALP 179 Query: 611 DSSLRETRHKLYLSNLAWKVRSNHLRDFFSA--FNLVSARVVFDSPSGRSAGYGFVSFAT 438 +S ETRHKLY+SNLAWK RS HLR+FF+A FNLVSARVVF P GR++GYGFVSF T Sbjct: 180 YASPGETRHKLYVSNLAWKARSTHLREFFTAADFNLVSARVVFADPQGRASGYGFVSFPT 239 Query: 437 KEEAESALAALDGKELLSRPIRLKF 363 +EEAE+A+A L+GKEL+ RPI LKF Sbjct: 240 REEAEAAIAKLNGKELMGRPISLKF 264 >ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis sativus] Length = 282 Score = 270 bits (691), Expect = 6e-70 Identities = 147/247 (59%), Positives = 181/247 (73%), Gaps = 5/247 (2%) Frame = -2 Query: 1088 FTKLPLCPQPSHPITLHMRISS----LYPSIKSPPYSFRLLRVERTRKPRFHVYSAVGDV 921 F KLP PI L + SS L P+ P SF R R + SA+ +V Sbjct: 22 FNKLP------SPIKLRISFSSPLLSLNPTTPISPTSFNS---SRNRGGGARLCSALQEV 72 Query: 920 AVEEKTEKSLESNQKRKLFVLNLPWSFSVADIKNLFGECGTVVDVEIIKHKDGKNRGFAF 741 +EE +E++ + NQKRKL++ NLPWS SV DIK LFG+CGTV DVEIIK K+G++RGFAF Sbjct: 73 TLEEASEENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKNGRSRGFAF 132 Query: 740 VTMASGDEAQAVINKFDSHELSGRIIRVEFAKRFKRPAHSPPADSSLRETRHKLYLSNLA 561 VTMAS DEAQA I KFDS E+SGR+I+VEFAKR K+P P ET +KLY+SNLA Sbjct: 133 VTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLA 192 Query: 560 WKVRSNHLRDFFSA-FNLVSARVVFDSPSGRSAGYGFVSFATKEEAESALAALDGKELLS 384 WKVRSN+LRDFFS FN ++ARVVFDSP+GRSAGYGFVSFAT+EEA++AL++L+GKEL+ Sbjct: 193 WKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKELMG 252 Query: 383 RPIRLKF 363 RP+RLKF Sbjct: 253 RPLRLKF 259 >ref|XP_006352864.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Solanum tuberosum] Length = 284 Score = 270 bits (690), Expect = 8e-70 Identities = 159/270 (58%), Positives = 195/270 (72%), Gaps = 10/270 (3%) Frame = -2 Query: 1142 MAVIEAAFSIISASCPPT---FTKLPLCPQPSHPITLHMRISSLYPSIKSPPYSFRLLRV 972 MA IE A S I +S PP+ + K PL P + I L SL S+KS L + Sbjct: 1 MAAIELAASSIFSSPPPSSSSYLKFPLFP---NSIKLQNSNHSLNLSLKSI-----LPLL 52 Query: 971 ERTRKPRFHVYSAVG-----DVAVEEKTEKSLESNQKRKLFVLNLPWSFSVADIKNLFGE 807 R + + H SAV V EEKTEK ++N +RKLFVLNLPWS +V DIKN+F E Sbjct: 53 SRKQCSQLHC-SAVEVTEPVTVQEEEKTEKPQKNNLRRKLFVLNLPWSLTVPDIKNIFAE 111 Query: 806 CGTVVDVEIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFAKRFKRPA 627 CG V DVEIIK +DGK+RGFAFVTM+SG+EAQA I+K DS+E+ GRIIRVEFAKRFK+P Sbjct: 112 CGIVDDVEIIKTEDGKSRGFAFVTMSSGEEAQAAIDKLDSYEVLGRIIRVEFAKRFKKPP 171 Query: 626 HSPPADSSLR-ETRHKLYLSNLAWKVRSNHLRDFFSA-FNLVSARVVFDSPSGRSAGYGF 453 +PP + + E RHKLY+SNLAWKVRS LR+FFSA +N +SARV+FD+ SGR+AGYGF Sbjct: 172 GAPPPSTPPQGEARHKLYVSNLAWKVRSTQLREFFSANYNPISARVIFDNASGRAAGYGF 231 Query: 452 VSFATKEEAESALAALDGKELLSRPIRLKF 363 VSF TKE+AE+A++ALDGKEL+ RPIRLKF Sbjct: 232 VSFDTKEQAEAAVSALDGKELMGRPIRLKF 261 >gb|EMJ10617.1| hypothetical protein PRUPE_ppa009362mg [Prunus persica] Length = 295 Score = 270 bits (690), Expect = 8e-70 Identities = 160/277 (57%), Positives = 194/277 (70%), Gaps = 17/277 (6%) Frame = -2 Query: 1142 MAVIEAAFSI---ISASCPPTFTKLPLCPQPSHPITLHMRISSLYPSIK------SPPYS 990 MA EAA S+ S+S +K P+PS + LH IS+ P I SPP Sbjct: 1 MAAFEAALSVSSLYSSSFSSYSSKFFASPKPSTSLKLH--ISNSIPPISRNFLYSSPPCI 58 Query: 989 FRLLRVERTRKPRFHVY-SAVGDV-----AVEEKTEKSLESNQKRKLFVLNLPWSFSVAD 828 TRKP F + SAV +V AVEEK E++ N KRKL+V+NLPWS +V D Sbjct: 59 LN----NPTRKPFFELMCSAVQEVTAEEEAVEEKAEETQTQNLKRKLYVVNLPWSLTVVD 114 Query: 827 IKNLFGECGTVVDVEIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFA 648 IKNLFGECGTV DVEIIK +GK+RGFAFVTMASG+EAQAVI KF SHE+ R IRVEFA Sbjct: 115 IKNLFGECGTVTDVEIIKQPNGKSRGFAFVTMASGEEAQAVIEKFHSHEVLDRTIRVEFA 174 Query: 647 KRFKRPAHSPPADSSLRETRHKLYLSNLAWKVRSNHLRDFFSA-FNL-VSARVVFDSPSG 474 K+FK+P+ PP + + ETR+KLY+SNL WKVRS+HLRDF S F + VSARVVF PSG Sbjct: 175 KQFKKPS-PPPPNPQIVETRYKLYVSNLGWKVRSSHLRDFVSENFKVPVSARVVFSGPSG 233 Query: 473 RSAGYGFVSFATKEEAESALAALDGKELLSRPIRLKF 363 +S GYGF+SFATKEEAESA+++L+GKEL+ RP+ LKF Sbjct: 234 KSGGYGFLSFATKEEAESAISSLNGKELMGRPLNLKF 270 >ref|XP_002326529.1| predicted protein [Populus trichocarpa] gi|566146773|ref|XP_006368391.1| 33 kDa ribonucleoprotein [Populus trichocarpa] gi|550346304|gb|ERP64960.1| 33 kDa ribonucleoprotein [Populus trichocarpa] Length = 294 Score = 269 bits (687), Expect = 2e-69 Identities = 150/269 (55%), Positives = 195/269 (72%), Gaps = 8/269 (2%) Frame = -2 Query: 1145 AMAVIEAAFSIISASCPPTFTKLPLCPQPSHPITLHMRISSLYPSIKSP-PYSFRLLRVE 969 A +++EAA ++ P++++ L P+ S P++L++ IS+ P I P Sbjct: 2 AASILEAATLSFFSTHHPSYSRFFLSPK-SPPLSLNLHISNPTPLISHNFPQPSLTQNHP 60 Query: 968 RTRKPRFHVYSAVGDVAVE--EKTEKSLESNQKRKLFVLNLPWSFSVADIKNLFGECGTV 795 R++ F + S V +V VE + E+ E+N KRKLFV+NLPWSFSV DIK+LFG+CGTV Sbjct: 61 RSKSLCFQLCSTVQEVTVEITPEEEEIQEANLKRKLFVVNLPWSFSVVDIKDLFGQCGTV 120 Query: 794 VDVEIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFAKRFKRPAH--- 624 DVEIIK K+G++RGFAFVTM +G+EAQA I+KF+S E+SGRIIRVEFAKR +RP Sbjct: 121 SDVEIIKQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEVSGRIIRVEFAKRLRRPPSPRL 180 Query: 623 -SPPADSSLRETRHKLYLSNLAWKVRSNHLRDFFSA-FNLVSARVVFDSPSGRSAGYGFV 450 PAD ETRHKLY+SNLAWKVR +HLR+FFS N VS+RVVFD P+GRS+GYGFV Sbjct: 181 PGTPADIPAGETRHKLYISNLAWKVRGSHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFV 240 Query: 449 SFATKEEAESALAALDGKELLSRPIRLKF 363 SFAT+EEA +A++A GKEL+ RPIRLKF Sbjct: 241 SFATREEAVAAISAFSGKELMGRPIRLKF 269 >gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides] Length = 294 Score = 268 bits (684), Expect = 4e-69 Identities = 149/269 (55%), Positives = 195/269 (72%), Gaps = 8/269 (2%) Frame = -2 Query: 1145 AMAVIEAAFSIISASCPPTFTKLPLCPQPSHPITLHMRISSLYPSIKSP-PYSFRLLRVE 969 A +++EAA ++ P++++ L P+ S P++L++ IS+ P I P Sbjct: 2 AASILEAATLSFFSTHHPSYSRFFLSPK-SPPLSLNLHISNPTPLISHNFPQPSLTQNHP 60 Query: 968 RTRKPRFHVYSAVGDVAVE--EKTEKSLESNQKRKLFVLNLPWSFSVADIKNLFGECGTV 795 R++ F + S V +V +E + E+ E+N KRKLFV+NLPWSFSV DIK+LFG+CGTV Sbjct: 61 RSKSLCFQLCSTVQEVTMEITPEEEEIQEANLKRKLFVVNLPWSFSVVDIKDLFGQCGTV 120 Query: 794 VDVEIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFAKRFKRPAH--- 624 DVEIIK K+G++RGFAFVTM +G+EAQA I+KF+S E+SGRIIRVEFAKR +RP Sbjct: 121 SDVEIIKQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEVSGRIIRVEFAKRLRRPPSPRL 180 Query: 623 -SPPADSSLRETRHKLYLSNLAWKVRSNHLRDFFSA-FNLVSARVVFDSPSGRSAGYGFV 450 PAD ETRHKLY+SNLAWKVR +HLR+FFS N VS+RVVFD P+GRS+GYGFV Sbjct: 181 PGTPADIPAGETRHKLYISNLAWKVRGSHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFV 240 Query: 449 SFATKEEAESALAALDGKELLSRPIRLKF 363 SFAT+EEA +A++A GKEL+ RPIRLKF Sbjct: 241 SFATREEAVAAISAFSGKELMGRPIRLKF 269 >gb|EXB32996.1| 31 kDa ribonucleoprotein [Morus notabilis] Length = 295 Score = 265 bits (677), Expect = 3e-68 Identities = 150/276 (54%), Positives = 189/276 (68%), Gaps = 16/276 (5%) Frame = -2 Query: 1142 MAVIEAAFSI-----------ISASCPPTFTKLPLCPQPSHPITLHMRIS-SLYPSIKSP 999 MA +EA S+ S+S + TKL +H + LH S S S Sbjct: 1 MAALEAVLSLRLCLLYSSSPSSSSSSSLSTTKLSFPRTRTHSLKLHSANSCSFLQSSTRN 60 Query: 998 PYSFRLLRVERTRKPRFHVYSAVGDVAVEEKTEKS---LESNQKRKLFVLNLPWSFSVAD 828 P+SFRL F V ++AV+EK E++ E+NQKRKL+V+NLPWS +V D Sbjct: 61 PWSFRLC---------FSVQEQ--EIAVQEKAEETHLEKENNQKRKLYVVNLPWSLTVVD 109 Query: 827 IKNLFGECGTVVDVEIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFA 648 IK+LFG+CGTV DVEIIK KDG+NRGFAFVTMA G+EAQAVI++F+ ++SGRII++E A Sbjct: 110 IKSLFGQCGTVTDVEIIKQKDGRNRGFAFVTMACGEEAQAVIDRFNLQDVSGRIIKIELA 169 Query: 647 KRFKRPAHSPPADSSLRETRHKLYLSNLAWKVRSNHLRDFFSA-FNLVSARVVFDSPSGR 471 K+FK+P+ P ET HKLY+SN+ WKVRS HLRDF S F VSARVVFD P GR Sbjct: 170 KQFKKPSPPRPPGPQPGETTHKLYVSNIEWKVRSTHLRDFVSENFKPVSARVVFDGPKGR 229 Query: 470 SAGYGFVSFATKEEAESALAALDGKELLSRPIRLKF 363 SAGYGFVSFAT+EEAE+A+++LDGKEL+ RP+RLKF Sbjct: 230 SAGYGFVSFATREEAEAAISSLDGKELMGRPLRLKF 265 >ref|XP_006294626.1| hypothetical protein CARUB_v10023663mg [Capsella rubella] gi|482563334|gb|EOA27524.1| hypothetical protein CARUB_v10023663mg [Capsella rubella] Length = 318 Score = 264 bits (674), Expect = 6e-68 Identities = 150/273 (54%), Positives = 186/273 (68%), Gaps = 13/273 (4%) Frame = -2 Query: 1142 MAVIEAAFSIISASCPPTFTKLP-LCPQPSHPITLHMRISSLYPSIKSPPYSFRLLRVER 966 MAV+EAA SI+S S + + P L Q S P +RI PS SP + Sbjct: 1 MAVLEAALSILSLSSSSSSSSKPYLFSQRSKPTAFTLRI----PSNHSPVVPLGSSAINN 56 Query: 965 TRKPRFHVYSAV-------GDVAVEEKTEKSLESNQKRKLFVLNLPWSFSVADIKNLFGE 807 +R+ + S + + E+KTE++ +SN KRKLFV NLPWS SV DI +LF + Sbjct: 57 SRRLVSVLCSVTEKETSTEDETSQEDKTEETQKSNLKRKLFVFNLPWSMSVHDISDLFRQ 116 Query: 806 CGTVVDVEIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFAKRFKRPA 627 CGTV +VEII+ KDGKNRGFAFVTMASG+EAQA ++KFD+ E+SGRIIRV FA+RFK+P Sbjct: 117 CGTVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAVDKFDAFEVSGRIIRVNFARRFKKPT 176 Query: 626 HSPP---ADSSLRETRHKLYLSNLAWKVRSNHLRDFFSA--FNLVSARVVFDSPSGRSAG 462 PP +TRHKLY+SNLAWK RS HLR+ F+A FN VSARVVF P GRS+G Sbjct: 177 PKPPNALPSPPPGDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSG 236 Query: 461 YGFVSFATKEEAESALAALDGKELLSRPIRLKF 363 YGFVSFAT+EEAE+A+ LDGKE++ RPI LKF Sbjct: 237 YGFVSFATREEAENAITKLDGKEIMGRPIILKF 269 >ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp. lyrata] gi|297325388|gb|EFH55808.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp. lyrata] Length = 308 Score = 261 bits (667), Expect = 4e-67 Identities = 154/274 (56%), Positives = 185/274 (67%), Gaps = 14/274 (5%) Frame = -2 Query: 1142 MAVIEAAFSIISASCPPTFTKLPL-CPQPSH--PITLHMRISSLYPSIKSPPYSFRLLRV 972 MAV+EAA I S S + + L C + S P L +R+ PS SP +S R Sbjct: 1 MAVLEAALCIFSFSSSSSSSNPYLFCKRSSSLKPTALSLRL----PSNLSPVFSLRSGGD 56 Query: 971 ERTRKPRF------HVYSAVGDVAVEEKTEKSLESNQKRKLFVLNLPWSFSVADIKNLFG 810 R SA + + EEKTE++ +SN KRKLFV NLPWS SV DI LFG Sbjct: 57 NSRRLVSVLCSVAEKETSAEEETSQEEKTEETQKSNLKRKLFVFNLPWSMSVNDISELFG 116 Query: 809 ECGTVVDVEIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFAKRFKRP 630 +CGTV +VEII+ KDGKNRGFAFVTMASG+EAQA I+KFD+ ++SGRII V FA+RFK+P Sbjct: 117 QCGTVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAIDKFDTSQVSGRIISVNFARRFKKP 176 Query: 629 AHSPPAD---SSLRETRHKLYLSNLAWKVRSNHLRDFFSA--FNLVSARVVFDSPSGRSA 465 PP D +TRHKLY+SNLAWK RS HLR+ F+A FN VSARVVF P GRS+ Sbjct: 177 TPKPPNDLPSPPPGDTRHKLYVSNLAWKARSTHLRELFTASDFNPVSARVVFADPEGRSS 236 Query: 464 GYGFVSFATKEEAESALAALDGKELLSRPIRLKF 363 GYGFVSFAT+EEAE A+A LDGKE++ RPI LKF Sbjct: 237 GYGFVSFATREEAEDAIAKLDGKEIMGRPIILKF 270 >ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana] gi|3608147|gb|AAC36180.1| putative chloroplast RNA binding protein precursor [Arabidopsis thaliana] gi|14596023|gb|AAK68739.1| putative chloroplast RNA binding protein precursor [Arabidopsis thaliana] gi|23198314|gb|AAN15684.1| putative chloroplast RNA binding protein precursor [Arabidopsis thaliana] gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana] Length = 308 Score = 259 bits (662), Expect = 1e-66 Identities = 150/271 (55%), Positives = 184/271 (67%), Gaps = 11/271 (4%) Frame = -2 Query: 1142 MAVIEAAFSIISASCPPTFTKLPLCPQPSHPITLHMRISSLYPSIKSPPYSFRLLRVERT 963 MAV+EA+ SI S S + +K L + S + L +S PS SP +S R Sbjct: 1 MAVLEASLSIFSFSSSSSSSKPYLFSKRSSSLKL-TALSLRIPSNLSPVFSLRSGSDNSR 59 Query: 962 RKPRF------HVYSAVGDVAVEEKTEKSLESNQKRKLFVLNLPWSFSVADIKNLFGECG 801 R SA + + EEKTE++ SN KRKLFV NLPWS SV DI LFG+CG Sbjct: 60 RLVSVLCSVAEKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCG 119 Query: 800 TVVDVEIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFAKRFKRPAHS 621 TV +VEII+ KDGKNRGFAFVTMASG+EAQA I+KFD+ ++SGRII V FA+RFK+P Sbjct: 120 TVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPK 179 Query: 620 PPAD---SSLRETRHKLYLSNLAWKVRSNHLRDFFSA--FNLVSARVVFDSPSGRSAGYG 456 P D + +TRHKLY+SNLAWK RS HLR+ F+A FN VSARVVF P GRS+GYG Sbjct: 180 SPNDLPSPAPGDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYG 239 Query: 455 FVSFATKEEAESALAALDGKELLSRPIRLKF 363 FVSFAT+EEAE+A+ L+GKE++ RPI LKF Sbjct: 240 FVSFATREEAENAITKLNGKEIMGRPITLKF 270 >ref|XP_004301780.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 299 Score = 253 bits (647), Expect = 8e-65 Identities = 149/274 (54%), Positives = 183/274 (66%), Gaps = 14/274 (5%) Frame = -2 Query: 1142 MAVIEAAFSIISASCPPTFTKLPLCPQPSHPITLHMRISSLYPSIK------SPPY---- 993 MA EAA S+ S P + L S P L++R+ S P I SPP Sbjct: 1 MAAFEAALSLPSLYSPCSSKTL------SFPKPLNLRLPSFIPPISHNFLLSSPPLIPAR 54 Query: 992 --SFRLLRVERTRKPRFHVYSAVGDVAVEEKTEKSLESNQKRKLFVLNLPWSFSVADIKN 819 SF LL ++ + EEKT+K + N KRKL+V+NLPWS +VADIK Sbjct: 55 KLSFELL-CSAVQEITTQEEEQAEQESAEEKTQK--QQNLKRKLYVVNLPWSLTVADIKT 111 Query: 818 LFGECGTVVDVEIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFAKRF 639 LFG+CG V DVEIIK DG+NRGFAFVTMASG+EAQAVI+KFDS ELSGR ++VEFAK+F Sbjct: 112 LFGQCGHVKDVEIIKQMDGRNRGFAFVTMASGEEAQAVIDKFDSQELSGRTVKVEFAKQF 171 Query: 638 KRPAHSPPADSSLRETRHKLYLSNLAWKVRSNHLRDFFSA--FNLVSARVVFDSPSGRSA 465 K+P P+ ++ETR+KLY+SNLAWK RS+HLRDF S VSARVVFD PSG+S Sbjct: 172 KKPT-PRPSTPKVQETRYKLYVSNLAWKARSSHLRDFVSLNFKTPVSARVVFDGPSGKSV 230 Query: 464 GYGFVSFATKEEAESALAALDGKELLSRPIRLKF 363 GYGFVSFA EEAE A++AL+G+EL+ RP+ LKF Sbjct: 231 GYGFVSFARMEEAEEAISALNGQELMGRPVTLKF 264 >gb|AFK48727.1| unknown [Lotus japonicus] Length = 285 Score = 244 bits (624), Expect = 4e-62 Identities = 137/267 (51%), Positives = 185/267 (69%), Gaps = 8/267 (2%) Frame = -2 Query: 1142 MAVIEAAFSIISASCPPTFTKLPLCP-QPSHPITLHMRISSLYPSIKSPPYSFRLLRVER 966 MA +E++ S+ + P F+ + L P +P + LH +S + + S S + Sbjct: 1 MAALESSLSVFA---PQRFSTIHLFPAKPPEFVKLHASLSHSHNLLFSSNAS------SK 51 Query: 965 TRKPRFHVYSAVGDVAVEEKTEKSLESNQ-----KRKLFVLNLPWSFSVADIKNLFGECG 801 T KP + SA+ +VA E TE+ E +Q K+KL+V NLPWS S ADIK+LFG+CG Sbjct: 52 TPKPCTQLCSALQEVA-EAATEEEPEQDQQATYIKKKLYVFNLPWSMSAADIKDLFGQCG 110 Query: 800 TVVDVEIIKHKDGKNRGFAFVTMASGDEAQAVINKFDSHELSGRIIRVEFAKRFKRPAHS 621 TV DVEII+ KDG+ +G+AFVTMASG+EAQA ++KFD+ ELSGRI+RVE AKRFK+P+ Sbjct: 111 TVTDVEIIRGKDGRGKGYAFVTMASGEEAQAAVDKFDTLELSGRILRVELAKRFKKPSPP 170 Query: 620 PPADSSLRETRHKLYLSNLAWKVRSNHLRDFFSA-FNL-VSARVVFDSPSGRSAGYGFVS 447 P E RH +Y SNLAWKVRS HLR+FF+ F +SAR+VFD+PSG++ GYGF+S Sbjct: 171 GPPSPPPSEARHVIYASNLAWKVRSTHLREFFTENFKAPLSARIVFDTPSGKTTGYGFIS 230 Query: 446 FATKEEAESALAALDGKELLSRPIRLK 366 + TKEEAE+A++ALDGKEL+ R + LK Sbjct: 231 YLTKEEAEAAISALDGKELMGRSLFLK 257