BLASTX nr result
ID: Rauwolfia21_contig00008845
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00008845
(551 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006338352.1| PREDICTED: 60S ribosomal protein L39-3-like ... 79 6e-13
ref|XP_004251767.1| PREDICTED: 60S ribosomal protein L39-3-like ... 78 2e-12
ref|XP_004242559.1| PREDICTED: 60S ribosomal protein L39-3-like ... 78 2e-12
gb|EOY29623.1| Ribosomal protein L39 family protein [Theobroma c... 77 2e-12
emb|CBI25619.3| unnamed protein product [Vitis vinifera] 77 2e-12
emb|CBI25617.3| unnamed protein product [Vitis vinifera] 77 2e-12
ref|XP_004964674.1| PREDICTED: 60S ribosomal protein L39-like [S... 77 3e-12
emb|CBI21094.3| unnamed protein product [Vitis vinifera] 77 4e-12
dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa... 76 6e-12
ref|XP_003603321.1| 60S ribosomal protein L39 [Medicago truncatu... 76 6e-12
ref|XP_002523523.1| ribosomal protein L39e, putative [Ricinus co... 76 6e-12
gb|EMS45683.1| 60S ribosomal protein L39 [Triticum urartu] 75 8e-12
pdb|3J61|LL Chain l, Localization Of The Large Subunit Ribosomal... 75 8e-12
ref|NP_001174637.1| Os06g0181566 [Oryza sativa Japonica Group] g... 75 8e-12
ref|XP_006450329.1| hypothetical protein CICLE_v10010138mg [Citr... 75 8e-12
ref|XP_006372129.1| hypothetical protein POPTR_0018s12030g [Popu... 75 1e-11
ref|XP_006372128.1| hypothetical protein POPTR_0018s12030g [Popu... 75 1e-11
ref|NP_001048394.1| Os02g0797200 [Oryza sativa Japonica Group] g... 75 1e-11
gb|AFW85570.1| 60S ribosomal protein L39, partial [Zea mays] 75 1e-11
ref|XP_003572901.1| PREDICTED: 60S ribosomal protein L39-like [B... 75 1e-11
>ref|XP_006338352.1| PREDICTED: 60S ribosomal protein L39-3-like [Solanum tuberosum]
Length = 51
Score = 79.3 bits (194), Expect = 6e-13
Identities = 36/36 (100%), Positives = 36/36 (100%)
Frame = -2
Query: 532 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR
Sbjct: 1 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 36
>ref|XP_004251767.1| PREDICTED: 60S ribosomal protein L39-3-like [Solanum lycopersicum]
gi|565353539|ref|XP_006343687.1| PREDICTED: 60S
ribosomal protein L39-3-like [Solanum tuberosum]
gi|565366803|ref|XP_006350074.1| PREDICTED: 60S
ribosomal protein L39-3-like [Solanum tuberosum]
Length = 51
Score = 77.8 bits (190), Expect = 2e-12
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = -2
Query: 532 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
MPSHK+FMIKKKLAKKQRQNRPIPYWIRMRTDNTIR
Sbjct: 1 MPSHKSFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 36
>ref|XP_004242559.1| PREDICTED: 60S ribosomal protein L39-3-like [Solanum lycopersicum]
Length = 39
Score = 77.8 bits (190), Expect = 2e-12
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = -2
Query: 532 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
MPSHK+FMIKKKLAKKQRQNRPIPYWIRMRTDNTIR
Sbjct: 1 MPSHKSFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 36
>gb|EOY29623.1| Ribosomal protein L39 family protein [Theobroma cacao]
Length = 51
Score = 77.4 bits (189), Expect = 2e-12
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = -2
Query: 532 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
MPSHKTFMIKKKLAKK RQNRPIPYWIRMRTDNTIR
Sbjct: 1 MPSHKTFMIKKKLAKKMRQNRPIPYWIRMRTDNTIR 36
>emb|CBI25619.3| unnamed protein product [Vitis vinifera]
Length = 72
Score = 77.4 bits (189), Expect = 2e-12
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = -2
Query: 535 KMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
KMPSHKTFMIKKKLAKK RQNRPIP+WIRMRTDNTIR
Sbjct: 21 KMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIR 57
>emb|CBI25617.3| unnamed protein product [Vitis vinifera]
Length = 70
Score = 77.4 bits (189), Expect = 2e-12
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = -2
Query: 535 KMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
KMPSHKTFMIKKKLAKK RQNRPIP+WIRMRTDNTIR
Sbjct: 19 KMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIR 55
>ref|XP_004964674.1| PREDICTED: 60S ribosomal protein L39-like [Setaria italica]
Length = 51
Score = 77.0 bits (188), Expect = 3e-12
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = -2
Query: 532 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
MPSHKTF IKKKLAKKQRQNRPIPYWIRMRTDNTIR
Sbjct: 1 MPSHKTFRIKKKLAKKQRQNRPIPYWIRMRTDNTIR 36
>emb|CBI21094.3| unnamed protein product [Vitis vinifera]
Length = 112
Score = 76.6 bits (187), Expect = 4e-12
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = -2
Query: 547 VASIKMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
+++ KMPSHKTF+IKKKLAKK RQNRPIP+WIRMRTDNTIR
Sbjct: 57 LSTAKMPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTIR 97
>dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa Japonica Group]
Length = 118
Score = 75.9 bits (185), Expect = 6e-12
Identities = 35/41 (85%), Positives = 36/41 (87%)
Frame = -2
Query: 547 VASIKMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
V + MPSHKTF IKKKLAKK RQNRPIPYWIRMRTDNTIR
Sbjct: 63 VPAATMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIR 103
>ref|XP_003603321.1| 60S ribosomal protein L39 [Medicago truncatula]
gi|355492369|gb|AES73572.1| 60S ribosomal protein L39
[Medicago truncatula] gi|388513831|gb|AFK44977.1|
unknown [Medicago truncatula]
gi|388516927|gb|AFK46525.1| unknown [Medicago
truncatula]
Length = 51
Score = 75.9 bits (185), Expect = 6e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 532 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
MPSHKTF+IKKKLAKK RQNRPIPYWIRMRTDNTIR
Sbjct: 1 MPSHKTFVIKKKLAKKMRQNRPIPYWIRMRTDNTIR 36
>ref|XP_002523523.1| ribosomal protein L39e, putative [Ricinus communis]
gi|223537230|gb|EEF38862.1| ribosomal protein L39e,
putative [Ricinus communis]
Length = 67
Score = 75.9 bits (185), Expect = 6e-12
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = -2
Query: 535 KMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
KMPSHKTF+IKKKLAKK RQNRPIP+WIRMRTDNTIR
Sbjct: 16 KMPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTIR 52
>gb|EMS45683.1| 60S ribosomal protein L39 [Triticum urartu]
Length = 115
Score = 75.5 bits (184), Expect = 8e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 532 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
MPSHKTF IK+KLAKKQRQNRPIPYWIRMRTDNTIR
Sbjct: 1 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIR 36
>pdb|3J61|LL Chain l, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome gi|57471714|gb|AAW50988.1| ribosomal protein
L39 [Triticum aestivum] gi|326487816|dbj|BAK05580.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|326492163|dbj|BAJ98306.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326511663|dbj|BAJ91976.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|475538449|gb|EMT09251.1| 60S ribosomal protein L39
[Aegilops tauschii]
Length = 51
Score = 75.5 bits (184), Expect = 8e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 532 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
MPSHKTF IK+KLAKKQRQNRPIPYWIRMRTDNTIR
Sbjct: 1 MPSHKTFRIKQKLAKKQRQNRPIPYWIRMRTDNTIR 36
>ref|NP_001174637.1| Os06g0181566 [Oryza sativa Japonica Group]
gi|514794821|ref|XP_004973152.1| PREDICTED: 60S
ribosomal protein L39-3-like isoform X2 [Setaria
italica] gi|75251551|sp|Q5SMI4.1|RL393_ORYSJ RecName:
Full=60S ribosomal protein L39-3
gi|55771364|dbj|BAD72315.1| 60S ribosomal protein L39
[Oryza sativa Japonica Group]
gi|55773789|dbj|BAD72572.1| 60S ribosomal protein L39
[Oryza sativa Japonica Group]
gi|125554313|gb|EAY99918.1| hypothetical protein
OsI_21918 [Oryza sativa Indica Group]
gi|125596264|gb|EAZ36044.1| hypothetical protein
OsJ_20351 [Oryza sativa Japonica Group]
gi|255676783|dbj|BAH93365.1| Os06g0181566 [Oryza sativa
Japonica Group]
Length = 51
Score = 75.5 bits (184), Expect = 8e-12
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = -2
Query: 532 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
MPSHKTF IKKKLAKK RQNRPIPYWIRMRTDNTIR
Sbjct: 1 MPSHKTFQIKKKLAKKMRQNRPIPYWIRMRTDNTIR 36
>ref|XP_006450329.1| hypothetical protein CICLE_v10010138mg [Citrus clementina]
gi|568840009|ref|XP_006473965.1| PREDICTED: 60S
ribosomal protein L39-3-like [Citrus sinensis]
gi|568859839|ref|XP_006483440.1| PREDICTED: 60S
ribosomal protein L39-3-like [Citrus sinensis]
gi|209967447|gb|ACJ02352.1| 60S ribosomal protein L39
[Vernicia fordii] gi|257219568|gb|ACV50437.1| 60S
ribosomal protein L39 [Jatropha curcas]
gi|557553555|gb|ESR63569.1| hypothetical protein
CICLE_v10010138mg [Citrus clementina]
Length = 51
Score = 75.5 bits (184), Expect = 8e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = -2
Query: 532 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
MPSHKTFMIKKKLAKK RQNRPIP+WIRMRTDNTIR
Sbjct: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIR 36
>ref|XP_006372129.1| hypothetical protein POPTR_0018s12030g [Populus trichocarpa]
gi|550318562|gb|ERP49926.1| hypothetical protein
POPTR_0018s12030g [Populus trichocarpa]
Length = 104
Score = 75.1 bits (183), Expect = 1e-11
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = -2
Query: 535 KMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
KMPSHKTF IKKKLAKK RQNRPIP+WIRMRTDNTIR
Sbjct: 53 KMPSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDNTIR 89
>ref|XP_006372128.1| hypothetical protein POPTR_0018s12030g [Populus trichocarpa]
gi|550318561|gb|ERP49925.1| hypothetical protein
POPTR_0018s12030g [Populus trichocarpa]
Length = 90
Score = 75.1 bits (183), Expect = 1e-11
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = -2
Query: 535 KMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
KMPSHKTF IKKKLAKK RQNRPIP+WIRMRTDNTIR
Sbjct: 53 KMPSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDNTIR 89
>ref|NP_001048394.1| Os02g0797200 [Oryza sativa Japonica Group]
gi|162459376|ref|NP_001105473.1| 60S ribosomal protein
L39 [Zea mays] gi|242063386|ref|XP_002452982.1|
hypothetical protein SORBIDRAFT_04g036030 [Sorghum
bicolor] gi|242094938|ref|XP_002437959.1| hypothetical
protein SORBIDRAFT_10g005510 [Sorghum bicolor]
gi|356507420|ref|XP_003522465.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|356515092|ref|XP_003526235.1| PREDICTED: 60S
ribosomal protein L39-2-like isoform X1 [Glycine max]
gi|356515112|ref|XP_003526245.1| PREDICTED: 60S
ribosomal protein L39-2 isoform 1 [Glycine max]
gi|356530615|ref|XP_003533876.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|356556588|ref|XP_003546606.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|502125052|ref|XP_004498777.1| PREDICTED: 60S
ribosomal protein L39-2-like [Cicer arietinum]
gi|502132450|ref|XP_004501366.1| PREDICTED: 60S
ribosomal protein L39-2-like [Cicer arietinum]
gi|502172688|ref|XP_004515175.1| PREDICTED: 60S
ribosomal protein L39-2-like [Cicer arietinum]
gi|514719418|ref|XP_004954230.1| PREDICTED: 60S
ribosomal protein L39-like [Setaria italica]
gi|1710551|sp|P51425.1|RL39_MAIZE RecName: Full=60S
ribosomal protein L39
gi|55977802|sp|P51426.2|RL392_ORYSJ RecName: Full=60S
ribosomal protein L39-2
gi|306756293|sp|Q6KAJ8.2|RL391_ORYSJ RecName: Full=60S
ribosomal protein L39-1 gi|1177369|emb|CAA64728.1|
ribosomal protein L39 [Zea mays]
gi|47497037|dbj|BAD19090.1| 60S RIBOSOMAL PROTEIN L39
[Oryza sativa Japonica Group]
gi|113537925|dbj|BAF10308.1| Os02g0797200 [Oryza sativa
Japonica Group] gi|125541470|gb|EAY87865.1| hypothetical
protein OsI_09286 [Oryza sativa Indica Group]
gi|125541472|gb|EAY87867.1| hypothetical protein
OsI_09288 [Oryza sativa Indica Group]
gi|125584013|gb|EAZ24944.1| hypothetical protein
OsJ_08725 [Oryza sativa Japonica Group]
gi|125584015|gb|EAZ24946.1| hypothetical protein
OsJ_08727 [Oryza sativa Japonica Group]
gi|149390885|gb|ABR25460.1| 60S ribosomal protein l39
[Oryza sativa Indica Group] gi|195609506|gb|ACG26583.1|
60S ribosomal protein L39 [Zea mays]
gi|195609702|gb|ACG26681.1| 60S ribosomal protein L39
[Zea mays] gi|195609876|gb|ACG26768.1| 60S ribosomal
protein L39 [Zea mays] gi|195609896|gb|ACG26778.1| 60S
ribosomal protein L39 [Zea mays]
gi|195609966|gb|ACG26813.1| 60S ribosomal protein L39
[Zea mays] gi|195610006|gb|ACG26833.1| 60S ribosomal
protein L39 [Zea mays] gi|195610038|gb|ACG26849.1| 60S
ribosomal protein L39 [Zea mays]
gi|195611058|gb|ACG27359.1| 60S ribosomal protein L39
[Zea mays] gi|195612224|gb|ACG27942.1| 60S ribosomal
protein L39 [Zea mays] gi|195641468|gb|ACG40202.1| 60S
ribosomal protein L39 [Zea mays]
gi|195643810|gb|ACG41373.1| 60S ribosomal protein L39
[Zea mays] gi|195659485|gb|ACG49210.1| 60S ribosomal
protein L39 [Zea mays] gi|215767950|dbj|BAH00179.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|215769187|dbj|BAH01416.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|238011942|gb|ACR37006.1| unknown [Zea mays]
gi|238012804|gb|ACR37437.1| unknown [Zea mays]
gi|241916182|gb|EER89326.1| hypothetical protein
SORBIDRAFT_10g005510 [Sorghum bicolor]
gi|241932813|gb|EES05958.1| hypothetical protein
SORBIDRAFT_04g036030 [Sorghum bicolor]
gi|413939321|gb|AFW73872.1| 60S ribosomal protein L39
[Zea mays] gi|552562415|gb|AFW64137.2| 60S ribosomal
protein L39 [Zea mays] gi|561010059|gb|ESW08966.1|
hypothetical protein PHAVU_009G089400g [Phaseolus
vulgaris] gi|561011513|gb|ESW10420.1| hypothetical
protein PHAVU_009G207900g [Phaseolus vulgaris]
gi|561028279|gb|ESW26919.1| hypothetical protein
PHAVU_003G159100g [Phaseolus vulgaris]
Length = 51
Score = 75.1 bits (183), Expect = 1e-11
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = -2
Query: 532 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
MPSHKTF IKKKLAKK RQNRPIPYWIRMRTDNTIR
Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIR 36
>gb|AFW85570.1| 60S ribosomal protein L39, partial [Zea mays]
Length = 99
Score = 75.1 bits (183), Expect = 1e-11
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = -2
Query: 532 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
MPSHKTF IKKKLAKK RQNRPIPYWIRMRTDNTIR
Sbjct: 49 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIR 84
>ref|XP_003572901.1| PREDICTED: 60S ribosomal protein L39-like [Brachypodium distachyon]
Length = 97
Score = 75.1 bits (183), Expect = 1e-11
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = -2
Query: 547 VASIKMPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIR 425
V++ MPSHKTF IK+KLAKK RQNRPIPYWIRMRTDNTIR
Sbjct: 42 VSAATMPSHKTFRIKQKLAKKMRQNRPIPYWIRMRTDNTIR 82