BLASTX nr result
ID: Rauwolfia21_contig00008616
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00008616
(357 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004239112.1| PREDICTED: pentatricopeptide repeat-containi... 188 7e-46
ref|XP_006348757.1| PREDICTED: pentatricopeptide repeat-containi... 187 2e-45
ref|XP_002316137.1| pentatricopeptide repeat-containing family p... 184 1e-44
ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containi... 176 4e-42
ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi... 176 4e-42
gb|EOY01914.1| Pentatricopeptide repeat (PPR) superfamily protei... 173 2e-41
ref|XP_002875182.1| pentatricopeptide repeat-containing protein ... 173 2e-41
gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus pe... 172 3e-41
gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus... 172 5e-41
ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citr... 171 9e-41
ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Caps... 171 9e-41
ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutr... 171 1e-40
ref|NP_178398.1| RNA editing factor OTP85 [Arabidopsis thaliana]... 171 1e-40
ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containi... 170 2e-40
ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containi... 167 2e-39
gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thali... 167 2e-39
gb|EXB69694.1| hypothetical protein L484_002149 [Morus notabilis] 165 7e-39
ref|XP_004490064.1| PREDICTED: pentatricopeptide repeat-containi... 164 1e-38
ref|XP_003613787.1| Pentatricopeptide repeat-containing protein ... 158 8e-37
ref|XP_002522441.1| pentatricopeptide repeat-containing protein,... 155 7e-36
>ref|XP_004239112.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Solanum lycopersicum]
Length = 605
Score = 188 bits (477), Expect = 7e-46
Identities = 88/118 (74%), Positives = 102/118 (86%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
GLNGD++VC AL+NMYI D S+R +FD + +PCVVTYNAII+GYVR S+PNEAL LF
Sbjct: 161 GLNGDMYVCPALMNMYIEFKDNDSARRVFDRIADPCVVTYNAIIIGYVRSSEPNEALLLF 220
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RELQ KK+KPTDVTILGV+SSCALLG L GKW+HEY+KKN FD+YVKVNTALIDMYA
Sbjct: 221 RELQVKKIKPTDVTILGVVSSCALLGTLGFGKWVHEYIKKNSFDQYVKVNTALIDMYA 278
>ref|XP_006348757.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Solanum tuberosum]
Length = 605
Score = 187 bits (474), Expect = 2e-45
Identities = 88/118 (74%), Positives = 102/118 (86%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
GL GD++VC AL+NMYI D S+R +FD + +PCVVTYNAIIMGYVR S+PN+AL LF
Sbjct: 161 GLKGDMYVCPALMNMYIECKDNGSARRVFDRIADPCVVTYNAIIMGYVRSSEPNKALLLF 220
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RELQ KK+KP+DVTILGV+SSCALLG L GKW+HEYVKKNGFD+YVKVNTALIDMYA
Sbjct: 221 RELQVKKIKPSDVTILGVVSSCALLGTLGFGKWVHEYVKKNGFDQYVKVNTALIDMYA 278
>ref|XP_002316137.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222865177|gb|EEF02308.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 601
Score = 184 bits (466), Expect = 1e-44
Identities = 86/118 (72%), Positives = 102/118 (86%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
GLN + +VC LINMY G +D+ ++ +FD +LEPCVV+YNAII GY R S+PNEALSLF
Sbjct: 157 GLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLF 216
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
R+LQA+KLKP DVT+L V+SSCALLGAL+LGKWIHEYVKKNG D+YVKVNTALIDMYA
Sbjct: 217 RQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYA 274
Score = 57.4 bits (137), Expect = 2e-06
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Frame = +3
Query: 6 LNGDIFVCSALINMYIGGSDISS---SRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALS 176
L D+ + + LIN +S + +F+ + +P +V +N++ GY R + P +A+S
Sbjct: 54 LQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAIS 113
Query: 177 LFRELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
LF + L P D T ++ +C + A + GK +H K G + V LI+MYA
Sbjct: 114 LFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYA 173
>ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 176 bits (445), Expect = 4e-42
Identities = 82/118 (69%), Positives = 101/118 (85%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
GLN +I++C LINMY +D++++R +FD + +PC+V+YNAII GY R SQPNEALSLF
Sbjct: 160 GLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLF 219
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RELQA ++PTDVT+L VI SCALLGAL+LGKWIHEYVKK GFD+YVKVNTALIDM+A
Sbjct: 220 RELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFA 277
Score = 63.2 bits (152), Expect = 4e-08
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Frame = +3
Query: 6 LNGDIFVCSALINMYIGG---SDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALS 176
L DI V + LIN S + + +FD +L+ ++ +N + GY R + P A S
Sbjct: 57 LQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFS 116
Query: 177 LFRELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
LF EL L P D T ++ +CA AL G +H + K G + + + LI+MYA
Sbjct: 117 LFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYA 176
>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
protein product [Vitis vinifera]
Length = 595
Score = 176 bits (445), Expect = 4e-42
Identities = 82/118 (69%), Positives = 102/118 (86%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
GL+ +++VC LINMY +++ +R +FD + EPCVVTYNA+I GY R S+PNEALSLF
Sbjct: 151 GLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLF 210
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RELQA+ LKPTDVT+L V+SSCALLGAL+LGKW+HEYVKKNGF+R+VKV+TALIDMYA
Sbjct: 211 RELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYA 268
Score = 58.5 bits (140), Expect = 9e-07
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Frame = +3
Query: 6 LNGDIFVCSALINMYIGGSDISS---SRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALS 176
L+ D+ V + IN +S + +FD + +P +V +N + GY R P A +
Sbjct: 48 LHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFT 107
Query: 177 LFRELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMY 353
LF ++ L P D T ++ +CA ALE G+ +H K G V V LI+MY
Sbjct: 108 LFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMY 166
>gb|EOY01914.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 604
Score = 173 bits (439), Expect = 2e-41
Identities = 79/118 (66%), Positives = 102/118 (86%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
GLN +I++C +LI+MY +D+ S+R +FD +L+PCV++YNAII GY + S+PNEALSLF
Sbjct: 160 GLNHNIYICPSLISMYTECNDLDSARRVFDKMLDPCVISYNAIITGYAKCSRPNEALSLF 219
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RELQ K LKPTDVT+L V+S CALLGAL+LGKWIHEYV K+GFD+Y+KV+TA+IDMYA
Sbjct: 220 RELQVKSLKPTDVTMLSVLSCCALLGALDLGKWIHEYVNKHGFDKYIKVSTAIIDMYA 277
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Frame = +3
Query: 6 LNGDIFVCSALINMYIGGSDISS---SRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALS 176
L DI + LIN +S + +FD V +P +V +N + GY R + P +A+
Sbjct: 57 LQNDITFLTKLINFCTKNPTFTSMEYAHKVFDKVSQPDIVLFNTMARGYSRSNTPTQAIP 116
Query: 177 LFRELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMY 353
L +L + P D T V+ +C+ ALE GK IH V K G + + + +LI MY
Sbjct: 117 LVSQLLSFGFLPDDYTFPSVLKACSSSKALEEGKQIHCLVIKLGLNHNIYICPSLISMY 175
>ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321020|gb|EFH51441.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 605
Score = 173 bits (438), Expect = 2e-41
Identities = 76/118 (64%), Positives = 100/118 (84%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
G++ +++VC LINMY D+ ++RC+FD ++EPCVV YNA+I GY RR++PNEALSLF
Sbjct: 161 GVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 220
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RE+Q K LKP ++T+L V+SSCALLG+L+LGKWIHEY KK+GF +YVKVNTALIDM+A
Sbjct: 221 REMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFA 278
Score = 66.2 bits (160), Expect = 4e-09
Identities = 37/98 (37%), Positives = 55/98 (56%)
Frame = +3
Query: 60 SDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLFRELQAKKLKPTDVTILGVI 239
S +S +R +FD + EP +V +N+I GY R + P E +LF E+ L P + T ++
Sbjct: 79 SSMSYARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLL 138
Query: 240 SSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMY 353
+CA+ ALE G+ +H K G D V V LI+MY
Sbjct: 139 KACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMY 176
>gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus persica]
Length = 593
Score = 172 bits (437), Expect = 3e-41
Identities = 82/118 (69%), Positives = 99/118 (83%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
GL+ +I+VC LINMY +D+ ++R +FD + +PCVV +NA+I GY R S+PNEAL+LF
Sbjct: 149 GLHLNIYVCPTLINMYTECNDVDAARRVFDKIPDPCVVVHNAMIKGYARSSRPNEALALF 208
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RELQA LKPTDVT+L +SSCALLGAL+LGKWIHEYVKKN FDRYVKVNTALIDMYA
Sbjct: 209 RELQASNLKPTDVTMLSALSSCALLGALDLGKWIHEYVKKNRFDRYVKVNTALIDMYA 266
Score = 64.3 bits (155), Expect = 2e-08
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Frame = +3
Query: 6 LNGDIFVCSALINMYI---GGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALS 176
L DI V + LIN G+ + + +FD + P +V +N + GY R P A+S
Sbjct: 46 LQYDISVLTKLINFCTLNPTGTSMDYAHHLFDQIPHPDIVVFNTMARGYARSHAPFRAIS 105
Query: 177 LFRELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMY 353
LF + + L P D T ++ +CA ALE G+ +H + K G + V LI+MY
Sbjct: 106 LFAHILSSDLFPDDYTFASLLKACASSKALEEGRQLHCFAIKCGLHLNIYVCPTLINMY 164
>gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus vulgaris]
Length = 600
Score = 172 bits (435), Expect = 5e-41
Identities = 82/118 (69%), Positives = 98/118 (83%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
G++G+++VC LINMY +D+ ++R +FD + EPCVV YNAII R SQPNEAL+LF
Sbjct: 156 GVSGNMYVCPTLINMYTACNDMDAARRVFDKIDEPCVVAYNAIISSCARSSQPNEALALF 215
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RELQ LKPTDVT+L +SSCALLGAL+LGKWIHEYVKKNGFD+YVKVNTALIDMYA
Sbjct: 216 RELQESGLKPTDVTMLVALSSCALLGALDLGKWIHEYVKKNGFDKYVKVNTALIDMYA 273
Score = 55.5 bits (132), Expect = 7e-06
Identities = 30/90 (33%), Positives = 46/90 (51%)
Frame = +3
Query: 84 IFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLFRELQAKKLKPTDVTILGVISSCALLGA 263
+FD + +P +V +N + GY R P A+ LF ++ L P D T + +CA L A
Sbjct: 82 MFDQIPQPDIVLFNTMARGYARFDDPLRAILLFSQVLFSGLLPDDYTFSSLFKACARLKA 141
Query: 264 LELGKWIHEYVKKNGFDRYVKVNTALIDMY 353
++ GK +H K G + V LI+MY
Sbjct: 142 IQEGKQLHCLAVKLGVSGNMYVCPTLINMY 171
>ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citrus clementina]
gi|568859243|ref|XP_006483151.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g02980-like [Citrus sinensis]
gi|557540892|gb|ESR51936.1| hypothetical protein
CICLE_v10031011mg [Citrus clementina]
Length = 598
Score = 171 bits (433), Expect = 9e-41
Identities = 79/118 (66%), Positives = 99/118 (83%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
GLN +++VC+ LIN+Y SD+ ++R IF+ + EPCVV+YNAII Y R S+PNEALSLF
Sbjct: 154 GLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAIITAYARSSRPNEALSLF 213
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RELQ + LKPTDVT+L +SSCALLG+L+LGKWIHEY+KK G D+YVKVNTALIDM+A
Sbjct: 214 RELQERNLKPTDVTMLSALSSCALLGSLDLGKWIHEYIKKYGLDKYVKVNTALIDMHA 271
Score = 65.9 bits (159), Expect = 6e-09
Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Frame = +3
Query: 6 LNGDIFVCSALINMYIGGSDISS---SRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALS 176
L D+ V + LIN SS + +FD + EP +V +N + GY R P A+
Sbjct: 49 LQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPEPDIVLFNTMARGYSRSKTPIRAIF 108
Query: 177 LFRELQAKKLKPTDVTILGVISSCALLG--ALELGKWIHEYVKKNGFDRYVKVNTALIDM 350
LF EL L P D + ++ +CA +G ALE GK +H + K G + + V T LI++
Sbjct: 109 LFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINL 168
Query: 351 YA 356
YA
Sbjct: 169 YA 170
>ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Capsella rubella]
gi|482559454|gb|EOA23645.1| hypothetical protein
CARUB_v10016843mg [Capsella rubella]
Length = 630
Score = 171 bits (433), Expect = 9e-41
Identities = 76/118 (64%), Positives = 99/118 (83%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
GL+ +++VC LINMY D+ S+RC+FD ++EPCVV YNA+I GY +R++PNEALSLF
Sbjct: 186 GLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYAKRNRPNEALSLF 245
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RE+Q K LKP ++T+L V+SSCALLG+L+LGKWIHEY KK+ F +YVKVNTALIDM+A
Sbjct: 246 REMQGKSLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHEFCKYVKVNTALIDMFA 303
Score = 68.6 bits (166), Expect = 9e-10
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Frame = +3
Query: 6 LNGDIFVCSALINMYIGG---SDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALS 176
L+ D+ + LIN S +S +R +FD + EP +V +N++ GY R + P +A S
Sbjct: 83 LHEDVSFITKLINFCTESPTESSMSYARHLFDAMSEPDIVIFNSMARGYSRSTTPLDAFS 142
Query: 177 LFRELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMY 353
LF E+ L P + T ++ +CA+ ALE G+ +H K G D V V LI+MY
Sbjct: 143 LFAEILGGDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMY 201
>ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutrema salsugineum]
gi|557092383|gb|ESQ33030.1| hypothetical protein
EUTSA_v10003852mg [Eutrema salsugineum]
Length = 605
Score = 171 bits (432), Expect = 1e-40
Identities = 77/118 (65%), Positives = 100/118 (84%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
GL+ +I+VC LINMY D+ ++RC+FD ++EPCVV+YNA+I GY RR++PNEALSLF
Sbjct: 161 GLDDNIYVCPTLINMYTECEDVDAARCVFDGIVEPCVVSYNAMITGYARRNRPNEALSLF 220
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RE+Q K LKP +VT+L V+SSC+LLG+L+LGKWIHEY KK+GF +YVKV TALIDM+A
Sbjct: 221 REMQGKNLKPNEVTLLSVLSSCSLLGSLDLGKWIHEYAKKHGFCKYVKVITALIDMFA 278
Score = 65.9 bits (159), Expect = 6e-09
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Frame = +3
Query: 6 LNGDIFVCSALINM---YIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALS 176
L+ D+ + LIN Y S +S +R +FD + EP +V +N++ GY R + P EA S
Sbjct: 57 LHEDVSFITKLINFCTEYPTTSSMSYARQLFDAMPEPDIVVFNSMARGYSRSTTPLEAFS 116
Query: 177 LFRE-LQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMY 353
LF E L+ L P T ++ +CA ALE G+ +H K G D + V LI+MY
Sbjct: 117 LFVEILEDDYLLPDGYTFPSLLKACAAAKALEEGRQLHCLSMKLGLDDNIYVCPTLINMY 176
>ref|NP_178398.1| RNA editing factor OTP85 [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g02980 gi|3461822|gb|AAC32916.1| hypothetical protein
[Arabidopsis thaliana] gi|330250557|gb|AEC05651.1| RNA
editing factor OTP85 [Arabidopsis thaliana]
Length = 603
Score = 171 bits (432), Expect = 1e-40
Identities = 76/118 (64%), Positives = 99/118 (83%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
GL+ +++VC LINMY D+ S+RC+FD ++EPCVV YNA+I GY RR++PNEALSLF
Sbjct: 159 GLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 218
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RE+Q K LKP ++T+L V+SSCALLG+L+LGKWIH+Y KK+ F +YVKVNTALIDM+A
Sbjct: 219 REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFA 276
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/98 (35%), Positives = 55/98 (56%)
Frame = +3
Query: 60 SDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLFRELQAKKLKPTDVTILGVI 239
S +S +R +F+ + EP +V +N++ GY R + P E SLF E+ + P + T ++
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 240 SSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMY 353
+CA+ ALE G+ +H K G D V V LI+MY
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMY 174
>ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Fragaria vesca subsp. vesca]
Length = 593
Score = 170 bits (430), Expect = 2e-40
Identities = 83/118 (70%), Positives = 97/118 (82%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
G+ +IFVC ALINMY S + +R +FD + EPCVV +NA+I GY R S+PNEAL+LF
Sbjct: 149 GMQLNIFVCPALINMYTECSAVDVARQVFDKMPEPCVVVHNAMITGYARNSRPNEALALF 208
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RELQA LKPTDVT+L +SSCALLGAL+LGKWIHEYVKKN FDRYVKVNTALIDMY+
Sbjct: 209 RELQASGLKPTDVTMLSALSSCALLGALDLGKWIHEYVKKNRFDRYVKVNTALIDMYS 266
Score = 67.4 bits (163), Expect = 2e-09
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Frame = +3
Query: 6 LNGDIFVCSALIN---MYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALS 176
L D+ V S LIN + + + + +FD + P +V +N + GY R + P A+S
Sbjct: 46 LQYDLSVLSKLINSCTLNPTATSMDYAHQLFDQIPHPDIVVFNTMARGYSRSTTPFRAIS 105
Query: 177 LFRELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMY 353
LF ++ + + P D T ++ +CA ALE GK +H YV K G + V ALI+MY
Sbjct: 106 LFSQVLSSGIFPDDYTFPALLKACAACKALEEGKQLHCYVIKCGMQLNIFVCPALINMY 164
>ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 167 bits (422), Expect = 2e-39
Identities = 79/118 (66%), Positives = 96/118 (81%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
G+ +++VC LINMY +D+ ++R +FD + EPCVV YNAII R S+PNEAL+LF
Sbjct: 165 GVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALF 224
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RELQ LKPTDVT+L +SSCALLGAL+LG+WIHEYVKKNGFD+YVKVNTALIDMYA
Sbjct: 225 RELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYA 282
Score = 57.4 bits (137), Expect = 2e-06
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Frame = +3
Query: 24 VCSALINMYIGGSDISS---SRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLFRELQ 194
V + LIN I+S + +FD + +P +V +N + GY R P A+ L ++
Sbjct: 68 VLTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVL 127
Query: 195 AKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMY 353
L P D T ++ +CA L ALE GK +H K G + V LI+MY
Sbjct: 128 CSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMY 180
>gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 167 bits (422), Expect = 2e-39
Identities = 75/118 (63%), Positives = 98/118 (83%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
GL+ +++VC LINMY D+ S+R +FD ++EPCVV YNA+I GY RR++PNEALSLF
Sbjct: 159 GLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLF 218
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RE+Q K LKP ++T+L V+SSCALLG+L+LGKWIH+Y KK+ F +YVKVNTALIDM+A
Sbjct: 219 REMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFA 276
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/98 (35%), Positives = 55/98 (56%)
Frame = +3
Query: 60 SDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLFRELQAKKLKPTDVTILGVI 239
S +S +R +F+ + EP +V +N++ GY R + P E SLF E+ + P + T ++
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 240 SSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMY 353
+CA+ ALE G+ +H K G D V V LI+MY
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMY 174
>gb|EXB69694.1| hypothetical protein L484_002149 [Morus notabilis]
Length = 594
Score = 165 bits (417), Expect = 7e-39
Identities = 79/118 (66%), Positives = 93/118 (78%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
GL +I+VC LINMY +D+ +R FD + EPC+V YNAII GY R S PNEAL+LF
Sbjct: 151 GLGLNIYVCPTLINMYTACNDVHFARRFFDMIDEPCIVMYNAIITGYARNSLPNEALALF 210
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RELQ ++KPTDVT+L V+S CALLGAL+LG+W HEYVKKNGF YVKVNTALIDMYA
Sbjct: 211 RELQVTEVKPTDVTMLSVLSCCALLGALDLGRWAHEYVKKNGFGEYVKVNTALIDMYA 268
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Frame = +3
Query: 6 LNGDIFVCSALINMYIGGSD---ISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALS 176
L DI V + LIN + ++ +FD + +P V+ +N + GY R P A++
Sbjct: 48 LQNDISVVAKLINFCTLSPTPGFMGHAQHLFDQIPQPDVIVFNTMARGYARSETPLRAIA 107
Query: 177 LFRELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMY 353
LF + + + P D T ++ +CA ALE GK +H K+G + V LI+MY
Sbjct: 108 LFAQTLSNGILPDDYTFPSLLKACASSKALEEGKQLHSLALKHGLGLNIYVCPTLINMY 166
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/117 (26%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
G + V +ALI+MY + + +F+ + ++ +IM Y ++A+S+F
Sbjct: 252 GFGEYVKVNTALIDMYAKCGSLEDAVSVFENMSVKDTQAWSGMIMAYATHGHASKAISIF 311
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELG-KWIHEYVKKNGFDRYVKVNTALIDM 350
E++ + KP ++T LG++ +C+ G +ELG ++ H KK G +K ++D+
Sbjct: 312 EEMKKARFKPDEITFLGLLYACSHTGLVELGFEYFHNMSKKYGIVPGIKHYGCMVDL 368
>ref|XP_004490064.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cicer arietinum]
Length = 602
Score = 164 bits (415), Expect = 1e-38
Identities = 79/118 (66%), Positives = 95/118 (80%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
G+ +++V LINMY DI ++R +FD + EPCVV YNAIIM R SQPNEAL+LF
Sbjct: 158 GVGNNMYVVPTLINMYTSCGDIDAARRVFDKIDEPCVVAYNAIIMSLARNSQPNEALALF 217
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
R+LQ LK TDVT+L V+SSCALLG+L+LG+W+HEYVKKNGFDRYVKVNTALIDMYA
Sbjct: 218 RDLQESGLKATDVTMLVVLSSCALLGSLDLGRWMHEYVKKNGFDRYVKVNTALIDMYA 275
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/90 (33%), Positives = 47/90 (52%)
Frame = +3
Query: 84 IFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLFRELQAKKLKPTDVTILGVISSCALLGA 263
+FD + P +V +N++ GY R + P A+ LF + L P D T ++ C+ + A
Sbjct: 84 LFDKITLPDIVLFNSMARGYARFNDPLRAIILFSHVLCNGLLPDDYTFSSLLKVCSKVKA 143
Query: 264 LELGKWIHEYVKKNGFDRYVKVNTALIDMY 353
LE GK +H + K G + V LI+MY
Sbjct: 144 LEEGKQLHCFALKLGVGNNMYVVPTLINMY 173
>ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 586
Score = 158 bits (399), Expect = 8e-37
Identities = 77/118 (65%), Positives = 94/118 (79%)
Frame = +3
Query: 3 GLNGDIFVCSALINMYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLF 182
G++ +++V LINMY DI +SR +FD + EPCVV YNAIIM R ++ NEAL+LF
Sbjct: 142 GVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALF 201
Query: 183 RELQAKKLKPTDVTILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
RELQ LKPTDVT+L V+SSCALLG+L+LG+W+HEYVKK GFDRYVKVNT LIDMYA
Sbjct: 202 RELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYA 259
>ref|XP_002522441.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538326|gb|EEF39933.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 290
Score = 155 bits (391), Expect = 7e-36
Identities = 72/104 (69%), Positives = 89/104 (85%)
Frame = +3
Query: 45 MYIGGSDISSSRCIFDTVLEPCVVTYNAIIMGYVRRSQPNEALSLFRELQAKKLKPTDVT 224
MY +D+ +R +FD +LEPCV++YNAIIM Y R ++PNEAL+LFR+LQAKKLKPTDV
Sbjct: 1 MYTECNDVDGTRRVFDKILEPCVISYNAIIMIYARSNRPNEALALFRKLQAKKLKPTDVI 60
Query: 225 ILGVISSCALLGALELGKWIHEYVKKNGFDRYVKVNTALIDMYA 356
+L V+ SCA LGAL+LGKW++EYVKKNGFD+YVKVNTALI MYA
Sbjct: 61 MLSVLLSCAFLGALDLGKWVNEYVKKNGFDKYVKVNTALISMYA 104