BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00007642
         (3265 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp...   883   0.0  
ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron sp...   872   0.0  
emb|CBI27903.3| unnamed protein product [Vitis vinifera]              867   0.0  
ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron sp...   858   0.0  
gb|EOY30431.1| CRS1 / YhbY domain-containing protein, putative i...   846   0.0  
gb|EMJ04994.1| hypothetical protein PRUPE_ppa001111mg [Prunus pe...   837   0.0  
ref|XP_002514120.1| conserved hypothetical protein [Ricinus comm...   830   0.0  
gb|EOY30434.1| CRS1 / YhbY domain-containing protein, putative i...   825   0.0  
gb|EOY30435.1| CRS1 / YhbY domain-containing protein, putative i...   825   0.0  
gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitat...   814   0.0  
ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron sp...   804   0.0  
ref|XP_006475466.1| PREDICTED: chloroplastic group IIA intron sp...   786   0.0  
ref|XP_006451488.1| hypothetical protein CICLE_v10007477mg [Citr...   786   0.0  
ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron sp...   783   0.0  
ref|XP_006475470.1| PREDICTED: chloroplastic group IIA intron sp...   783   0.0  
ref|XP_002309217.2| hypothetical protein POPTR_0006s15340g [Popu...   771   0.0  
ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron sp...   742   0.0  
ref|XP_004507937.1| PREDICTED: chloroplastic group IIA intron sp...   738   0.0  
ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron sp...   736   0.0  
ref|XP_004956664.1| PREDICTED: chloroplastic group IIA intron sp...   704   0.0  

>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 884

 Score =  883 bits (2282), Expect = 0.0
 Identities = 488/848 (57%), Positives = 602/848 (70%), Gaps = 22/848 (2%)
 Frame = -2

Query: 3231 SPYPSSQSLFFLIYQPQLSSANSFRNLRLKISCSSQTIEIGTQENS----HTKKRRKPRP 3064
            SP PS+  L  L+ QPQ   +N+FR L+   SCS  +I++ TQ+       TK +RKPRP
Sbjct: 4    SPSPSNLHLHLLL-QPQAHYSNTFRTLKFNCSCSYHSIQVDTQQVKVPLKTTKAKRKPRP 62

Query: 3063 SFLDRIQEKWSTKTTSSRETFPWXXXXXXXXXXXXXXXXESSGVIVAETDSRKCSELSET 2884
            SF ++I++KWS K  S RE FPW                 SSGV+V +++    S  S  
Sbjct: 63   SFFEQIRDKWSLKINSPREKFPWQEQAEETQN--------SSGVVVPDSEVIDSSVGSPV 114

Query: 2883 ASFSSIEKVNLPPWTHGNKHRKSQFVSEARNLDRS-----NVV---------PHFNRSGE 2746
            +S S    V++P   H +K R  + VSE      S     NVV           +++S +
Sbjct: 115  SSASESRFVSVP-CIHESKPRNPRLVSEPEISQNSCEQGVNVVGFGSHRASVDEWSKSFQ 173

Query: 2745 R-LDFDEEIGEKGVEYDSIPIGLSKKGQTSVLEEDKRDKSNNSAVEMFQEFNSVKGFNDS 2569
            + +D D +   +GVE D IPIG+    +T +   D     N       ++F + +GF+ +
Sbjct: 174  KEVDSDGKFEGEGVEVDEIPIGVLGTEKTEIEMGDANVSLNEKPPGGDEDFGNFEGFSGN 233

Query: 2568 T---RRPWERENKRESVDRKRVRRGNADLAEKVIPEPELKRLRNVALRMVERIKVGAAGV 2398
            +     PW+R    + V+R    R N  +AE+++PE EL+RL+N+ALRM+ERIKVGAAGV
Sbjct: 234  SSLIELPWKRREGLQPVERDGWGRRNTRMAERMVPEHELRRLKNIALRMLERIKVGAAGV 293

Query: 2397 TQGLVDSIQEKWKVDEVVKLKFEGPPSMNMRRTHEILESRTGGMVIWRSGSSIVLYRGTA 2218
            TQ LVD+I EKW+ DEVVKLKFEGP S NM+RTHEILE+RTGG+VIWR+GSS+VLYRG A
Sbjct: 294  TQSLVDAIHEKWRKDEVVKLKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVVLYRGMA 353

Query: 2217 YKLDCVQAYNKETQKSATTIESSSGALANDINQSIGVKYFNGAAESSRTDSSKQIYNLSR 2038
            YKL CVQ+Y K+ + +    E S  A AN I Q IGVK      ES  +DS++ + +LS 
Sbjct: 354  YKLHCVQSYIKQERDNVNISEYSQDA-ANVIIQDIGVKDIVKTTESVISDSARYLKDLSE 412

Query: 2037 XXXXXXXXXXXXXXXLGPRFKDWSGREPLPVDADLLPAVVPGYRRPFRLLPHGVRQGLRD 1858
                           LGPRFKDWSGREPLPVDADLLP+VV  Y+ PFRLLP+G+R  LR+
Sbjct: 413  EELMDLSELNHLLDELGPRFKDWSGREPLPVDADLLPSVVHEYKPPFRLLPYGMRHCLRN 472

Query: 1857 KEMTYFRRTARQMPPHFALGRNRELQGLALVMVKLWERSAIAKIAIKRGVQNTCNERMAE 1678
            +EMT+ RR AR MPPHFALGR+RELQGLA+ MVKLWERSAIAKIAIKRGVQNTCN+RMAE
Sbjct: 473  REMTFIRRLARTMPPHFALGRSRELQGLAMAMVKLWERSAIAKIAIKRGVQNTCNDRMAE 532

Query: 1677 ELKVLTGGTLLSRNKEYIVFYRGNDFLPSGVSKALIEKERLSALQQDEEEKARLGAVALI 1498
            ELK LTGGTL+SRNK+YIVFYRGNDFLP  V +AL E+ +L  LQQDEEE+AR  A ALI
Sbjct: 533  ELKNLTGGTLVSRNKDYIVFYRGNDFLPPHVMEALKERRKLRDLQQDEEEQARHRASALI 592

Query: 1497 ESNTKATKGTLVAGTLSETKAATSHWGNQPSSEDLEKMMKESAVARHASLVEFLEKKLAI 1318
            +S  ++ KG LVAGTL+ET AATS WG++PS ED+ KM+++SA+ARHASLV ++ KKLA 
Sbjct: 593  DSKARSAKGPLVAGTLAETLAATSRWGSEPSEEDVGKMIRDSALARHASLVRYVGKKLAH 652

Query: 1317 AKGKIANAEKALKKVQGKLEPAELPTDLETLSDEERFLFRKIGLSMKTYLLLGRREVFDG 1138
            AK K+   EKAL+KVQ  LEPAELP DLETLSDEERFLFRKIGLSMK +LLLG R +FDG
Sbjct: 653  AKAKLKKTEKALRKVQEDLEPAELPMDLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDG 712

Query: 1137 TIENMHLHWKHRELVKIIVKRKSFPQVKHIATSLEAESGGVLVSVDKTVKGYAIIIYRGK 958
            T+ENMHLHWK+RELVKIIVK K+F QVKHIA SLEAESGGVLVSVD+T KGYAII+YRGK
Sbjct: 713  TVENMHLHWKYRELVKIIVKGKNFAQVKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGK 772

Query: 957  NYQRPSTFRPKNLLTKRQALARAIELQRREALKHHISELQEKIEKLKSELEDMKIVKEID 778
            NYQRP   RPKNLLTKRQALAR+IELQR EALKHHIS+L+E+I+ LKS  E+MK    ID
Sbjct: 773  NYQRPHALRPKNLLTKRQALARSIELQRHEALKHHISDLEERIKLLKSLPEEMKTGNGID 832

Query: 777  EKTIYSRI 754
            +K  YSR+
Sbjct: 833  DKAFYSRL 840


>ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
            gi|565382761|ref|XP_006357700.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 820

 Score =  872 bits (2253), Expect = 0.0
 Identities = 493/847 (58%), Positives = 600/847 (70%), Gaps = 18/847 (2%)
 Frame = -2

Query: 3240 PTPSPYPSSQSLFFLIYQPQLSSANSFRNLRL-KISCSS-QTIEIGTQEN-SHTKKRRKP 3070
            P    Y SS+ L F I  P++ + +S R   + +I CSS QTI    ++  +  KK+RKP
Sbjct: 8    PLSVDYISSKQLQFSIPLPKIQAWHSCRAKNVVRIYCSSPQTIHSNREKQINEIKKQRKP 67

Query: 3069 RPSFLDRIQEKWSTKTTSSRETFPWXXXXXXXXXXXXXXXXESSGVIVAETDSRKC--SE 2896
            RPSF+ ++Q+KWS K TS RE FPW                  + V V E   R+   SE
Sbjct: 68   RPSFVKQVQDKWSVKPTSLREKFPWQE---------------GNSVSVEEVVERQVQFSE 112

Query: 2895 L-----SETASFSSIEKVNLPPWTHGNKHRKSQFVSEARNLDRSNVVPHFNRSGERLDFD 2731
            L     +E+ S  S  KVNL PW HG + + SQ V E+  +            G+ L+  
Sbjct: 113  LENPVVNESVSSGSRVKVNLAPWVHGKQPKISQ-VGESSTV------------GKSLENC 159

Query: 2730 EEIGE--------KGVEYDSIPIGLSKKGQTSVLEEDKRDKSNNSAVEMFQEFNSVKGFN 2575
            E+IG         K V +D  P+   +  Q    E+D + +S   A    +    +    
Sbjct: 160  EDIGSIREQKSLNKQVNFDCAPL---RSPQQQDFEKDIKLESKAEA----RVDKGITNAK 212

Query: 2574 DSTRRPWERENKRESVDRKRVRRGNADLAEKVIPEPELKRLRNVALRMVERIKVGAAGVT 2395
            DS R PWE +         ++R+ NA+LAEK+IPE +LKRLRN ALRMVERIKVG+ GVT
Sbjct: 213  DSVRLPWEGD---------KLRKSNAELAEKLIPEAQLKRLRNAALRMVERIKVGSGGVT 263

Query: 2394 QGLVDSIQEKWKVDEVVKLKFEGPPSMNMRRTHEILESRTGGMVIWRSGSSIVLYRGTAY 2215
            Q LVDSIQ+KWKVDE+VKL+FEGPPS NM+RTH+ILE RTGG+VIWRSGSSIVLYRG +Y
Sbjct: 264  QELVDSIQDKWKVDEIVKLRFEGPPSHNMKRTHDILEHRTGGLVIWRSGSSIVLYRGISY 323

Query: 2214 KLDCVQAYNKETQKSATTIESSSGALANDINQSIGVKYFNGAAESSRTDSSKQIYNLSRX 2035
            KL CVQ++   T K+    ES      ND  QS+GVK  N AAE  R  S+    +LS  
Sbjct: 324  KLPCVQSF---TSKNHDVDESEYPN--NDSCQSLGVKCLNEAAERPRNGST----DLSSE 374

Query: 2034 XXXXXXXXXXXXXXLGPRFKDWSGREPLPVDADLLPAVVPGYRRPFRLLPHGVRQGLRDK 1855
                          +GPRFKDWSGREPLPVDADLLPAVVPGYR PFR LP+G +  L++K
Sbjct: 375  EIVDLSELNMILDEVGPRFKDWSGREPLPVDADLLPAVVPGYRPPFRRLPYGAKLNLKNK 434

Query: 1854 EMTYFRRTARQMPPHFALGRNRELQGLALVMVKLWERSAIAKIAIKRGVQNTCNERMAEE 1675
            EMTY RRTAR MPPHFALGRNR+LQGLA  MVKLW RSAIAKIAIKRGV NT NERM+EE
Sbjct: 435  EMTYLRRTARIMPPHFALGRNRQLQGLAAAMVKLWRRSAIAKIAIKRGVLNTSNERMSEE 494

Query: 1674 LKVLTGGTLLSRNKEYIVFYRGNDFLPSGVSKALIEKERLSALQQDEEEKARLGAVALIE 1495
            LKVLTGGTLLSRNK+YIVFYRGNDFLP  V++AL E ER S   QD+EE+AR  AV  I+
Sbjct: 495  LKVLTGGTLLSRNKDYIVFYRGNDFLPPRVTEALEEAERKSDFLQDQEEQARQRAVTSID 554

Query: 1494 SNTKATKGTLVAGTLSETKAATSHWGNQPSSEDLEKMMKESAVARHASLVEFLEKKLAIA 1315
            S+T+A K  LVAGTLSET AATS WGNQPS E+ EKMM+++AVARHASLV++LE+KLA+A
Sbjct: 555  SDTRAPKRPLVAGTLSETMAATSRWGNQPSIEEREKMMRDAAVARHASLVKYLEEKLALA 614

Query: 1314 KGKIANAEKALKKVQGKLEPAELPTDLETLSDEERFLFRKIGLSMKTYLLLGRREVFDGT 1135
            KGK+  AE  L+K+Q   EP+ELPTDLE LS EERFLFRK+GLSMK +LLLGRR+VFDGT
Sbjct: 615  KGKVKKAENMLRKLQENREPSELPTDLEILSAEERFLFRKMGLSMKPFLLLGRRDVFDGT 674

Query: 1134 IENMHLHWKHRELVKIIVKRKSFPQVKHIATSLEAESGGVLVSVDKTVKGYAIIIYRGKN 955
            IEN+HLHWK+RELVKII +R++  Q+KHIA +LEAESGG+LVS+DKT +GYAII+YRGKN
Sbjct: 675  IENIHLHWKYRELVKIIAERRNTAQIKHIAITLEAESGGLLVSIDKTTQGYAIILYRGKN 734

Query: 954  YQRPSTFRPKNLLTKRQALARAIELQRREALKHHISELQEKIEKLKSELEDMKIVKEIDE 775
            YQRP+ FRPKNLLTKRQALAR+IELQRREALKHHI+ LQ+KI+ LKSELED  +V+EIDE
Sbjct: 735  YQRPNEFRPKNLLTKRQALARSIELQRREALKHHITALQDKIQNLKSELEDTNMVEEIDE 794

Query: 774  KTIYSRI 754
            +T++SR+
Sbjct: 795  ETLFSRL 801


>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
          Length = 881

 Score =  867 bits (2240), Expect = 0.0
 Identities = 478/830 (57%), Positives = 580/830 (69%), Gaps = 4/830 (0%)
 Frame = -2

Query: 3231 SPYPSSQSLFFLIYQPQLSSANSFRNLRLKISCSSQTIEIGTQENS----HTKKRRKPRP 3064
            SP PS+  L  L+ QPQ   +N+FR L+   SCS  +I++ TQ+       TK +RKPRP
Sbjct: 46   SPSPSNLHLHLLL-QPQAHYSNTFRTLKFNCSCSYHSIQVDTQQVKVPLKTTKAKRKPRP 104

Query: 3063 SFLDRIQEKWSTKTTSSRETFPWXXXXXXXXXXXXXXXXESSGVIVAETDSRKCSELSET 2884
            SF ++I++KWS K  S RE FPW                 SSGV+V +++    S  S  
Sbjct: 105  SFFEQIRDKWSLKINSPREKFPWQEQAEETQN--------SSGVVVPDSEVIDSSVGSPV 156

Query: 2883 ASFSSIEKVNLPPWTHGNKHRKSQFVSEARNLDRSNVVPHFNRSGERLDFDEEIGEKGVE 2704
            +S S    V++P   H +K R  + VSE      S         G  +  + E+G+  V 
Sbjct: 157  SSASESRFVSVP-CIHESKPRNPRLVSEPEISQNSC------EQGVNVKTEIEMGDANVS 209

Query: 2703 YDSIPIGLSKKGQTSVLEEDKRDKSNNSAVEMFQEFNSVKGFNDSTRRPWERENKRESVD 2524
             +  P G                       E F  F    G +     PW+R    + V+
Sbjct: 210  LNEKPPG---------------------GDEDFGNFEGFSGNSSLIELPWKRREGLQPVE 248

Query: 2523 RKRVRRGNADLAEKVIPEPELKRLRNVALRMVERIKVGAAGVTQGLVDSIQEKWKVDEVV 2344
            R    R N  +AE+++PE EL+RL+N+ALRM+ERIKVGAAGVTQ LVD+I EKW+ DEVV
Sbjct: 249  RDGWGRRNTRMAERMVPEHELRRLKNIALRMLERIKVGAAGVTQSLVDAIHEKWRKDEVV 308

Query: 2343 KLKFEGPPSMNMRRTHEILESRTGGMVIWRSGSSIVLYRGTAYKLDCVQAYNKETQKSAT 2164
            KLKFEGP S NM+RTHEILE+RTGG+VIWR+GSS+VLYRG AYKL CVQ+Y K+ + +  
Sbjct: 309  KLKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVVLYRGMAYKLHCVQSYIKQERDNVN 368

Query: 2163 TIESSSGALANDINQSIGVKYFNGAAESSRTDSSKQIYNLSRXXXXXXXXXXXXXXXLGP 1984
              E S  A AN I Q IGVK      ES  +DS++ + +LS                LGP
Sbjct: 369  ISEYSQDA-ANVIIQDIGVKDIVKTTESVISDSARYLKDLSEEELMDLSELNHLLDELGP 427

Query: 1983 RFKDWSGREPLPVDADLLPAVVPGYRRPFRLLPHGVRQGLRDKEMTYFRRTARQMPPHFA 1804
            RFKDWSGREPLPVDADLLP+VV  Y+ PFRLLP+G+R  LR++EMT+ RR AR MPPHFA
Sbjct: 428  RFKDWSGREPLPVDADLLPSVVHEYKPPFRLLPYGMRHCLRNREMTFIRRLARTMPPHFA 487

Query: 1803 LGRNRELQGLALVMVKLWERSAIAKIAIKRGVQNTCNERMAEELKVLTGGTLLSRNKEYI 1624
            LGR+RELQGLA+ MVKLWERSAIAKIAIKRGVQNTCN+RMAEELK LTGGTL+SRNK+YI
Sbjct: 488  LGRSRELQGLAMAMVKLWERSAIAKIAIKRGVQNTCNDRMAEELKNLTGGTLVSRNKDYI 547

Query: 1623 VFYRGNDFLPSGVSKALIEKERLSALQQDEEEKARLGAVALIESNTKATKGTLVAGTLSE 1444
            VFYRGNDFLP  V +AL E+ +L  LQQDEEE+AR  A ALI+S  ++ KG LVAGTL+E
Sbjct: 548  VFYRGNDFLPPHVMEALKERRKLRDLQQDEEEQARHRASALIDSKARSAKGPLVAGTLAE 607

Query: 1443 TKAATSHWGNQPSSEDLEKMMKESAVARHASLVEFLEKKLAIAKGKIANAEKALKKVQGK 1264
            T AATS WG++PS ED+ KM+++SA+ARHASLV ++ KKLA AK K+   EKAL+KVQ  
Sbjct: 608  TLAATSRWGSEPSEEDVGKMIRDSALARHASLVRYVGKKLAHAKAKLKKTEKALRKVQED 667

Query: 1263 LEPAELPTDLETLSDEERFLFRKIGLSMKTYLLLGRREVFDGTIENMHLHWKHRELVKII 1084
            LEPAELP DLETLSDEERFLFRKIGLSMK +LLLG R +FDGT+ENMHLHWK+RELVKII
Sbjct: 668  LEPAELPMDLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHLHWKYRELVKII 727

Query: 1083 VKRKSFPQVKHIATSLEAESGGVLVSVDKTVKGYAIIIYRGKNYQRPSTFRPKNLLTKRQ 904
            VK K+F QVKHIA SLEAESGGVLVSVD+T KGYAII+YRGKNYQRP   RPKNLLTKRQ
Sbjct: 728  VKGKNFAQVKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGKNYQRPHALRPKNLLTKRQ 787

Query: 903  ALARAIELQRREALKHHISELQEKIEKLKSELEDMKIVKEIDEKTIYSRI 754
            ALAR+IELQR EALKHHIS+L+E+I+ LKS  E+MK    ID+K  YSR+
Sbjct: 788  ALARSIELQRHEALKHHISDLEERIKLLKSLPEEMKTGNGIDDKAFYSRL 837


>ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 812

 Score =  858 bits (2218), Expect = 0.0
 Identities = 479/835 (57%), Positives = 592/835 (70%), Gaps = 6/835 (0%)
 Frame = -2

Query: 3240 PTPSPYPSSQSLFFLIYQPQLSSANSFRNLRL-KISCSS-QTIEIGTQEN-SHTKKRRKP 3070
            P    Y SS+ L F I  P++   +S R   + ++ CSS QTI    ++  +  KK+RKP
Sbjct: 8    PLSFDYISSKQLQFSIPIPKIQDWHSCRAKNVVRVYCSSPQTIHSNREKQINEIKKQRKP 67

Query: 3069 RPSFLDRIQEKWSTKTTSSRETFPWXXXXXXXXXXXXXXXXESSGVIVAETDSRKCSE-- 2896
            RPSF+ ++Q+KWS K TS RE FPW                    V+ A+    K     
Sbjct: 68   RPSFVKQVQDKWSVKPTSLREKFPWQEGNSVSVEE----------VVEAQVQISKLENPV 117

Query: 2895 LSETASFSSIEKVNLPPWTHGNKHRKSQFVSEARNLDRS-NVVPHFNRSGERLDFDEEIG 2719
            ++++ S  S  KVNL PW HG + + SQ + E+ +LD+S         S E+   ++++ 
Sbjct: 118  VNDSVSSGSRVKVNLAPWVHGKQPKISQ-LGESSSLDKSLENCEDIGSSREQKSLNKQVN 176

Query: 2718 EKGVEYDSIPIGLSKKGQTSVLEEDKRDKSNNSAVEMFQEFNSVKGFNDSTRRPWERENK 2539
              G +++   I L  K +  V      DK    A             N+S R PWE +  
Sbjct: 177  VDGTDFEK-DIKLESKVEAHV------DKGITYA-------------NESVRLPWEGD-- 214

Query: 2538 RESVDRKRVRRGNADLAEKVIPEPELKRLRNVALRMVERIKVGAAGVTQGLVDSIQEKWK 2359
                   ++R+ NA+LAEK+IPE +LKRLRN ALRMVERIKVG+ GVTQ LVDSIQ+KWK
Sbjct: 215  -------KLRKSNAELAEKLIPEAQLKRLRNAALRMVERIKVGSGGVTQELVDSIQKKWK 267

Query: 2358 VDEVVKLKFEGPPSMNMRRTHEILESRTGGMVIWRSGSSIVLYRGTAYKLDCVQAYNKET 2179
            VDE+VKL+FEG PS NM+RTH+ILE RTGG+VIWRSGSSIVLYRG +YKL CVQ++   T
Sbjct: 268  VDEIVKLRFEGAPSHNMKRTHDILEHRTGGLVIWRSGSSIVLYRGISYKLPCVQSF---T 324

Query: 2178 QKSATTIESSSGALANDINQSIGVKYFNGAAESSRTDSSKQIYNLSRXXXXXXXXXXXXX 1999
             K+    ES      ND  QS+GVK  N A E  R  S+    +LS              
Sbjct: 325  SKNHDVNESEYPN--NDSCQSLGVKCLNEAVERPRNGST----DLSGEEIVDLSELNMIL 378

Query: 1998 XXLGPRFKDWSGREPLPVDADLLPAVVPGYRRPFRLLPHGVRQGLRDKEMTYFRRTARQM 1819
              +GPRFKDWSGR P+PVDADLLPAVVPGYR PFR LP+G +  L++KEMTY RRTAR M
Sbjct: 379  DEVGPRFKDWSGRGPMPVDADLLPAVVPGYRPPFRRLPYGAKLNLKNKEMTYLRRTARIM 438

Query: 1818 PPHFALGRNRELQGLALVMVKLWERSAIAKIAIKRGVQNTCNERMAEELKVLTGGTLLSR 1639
            PPHFALGRNR+LQGLA  MVKLW RSAIAKIAIKRGV NT NERMAEELKVLTGGTLLSR
Sbjct: 439  PPHFALGRNRQLQGLAAAMVKLWRRSAIAKIAIKRGVLNTSNERMAEELKVLTGGTLLSR 498

Query: 1638 NKEYIVFYRGNDFLPSGVSKALIEKERLSALQQDEEEKARLGAVALIESNTKATKGTLVA 1459
            NK+YIVFYRGNDFL   V++AL E ER S   QD+EE+AR  A   I+S+T+A K  LVA
Sbjct: 499  NKDYIVFYRGNDFLSPRVTEALEEAERKSDFLQDQEEQARQRAATSIDSDTRAPKRPLVA 558

Query: 1458 GTLSETKAATSHWGNQPSSEDLEKMMKESAVARHASLVEFLEKKLAIAKGKIANAEKALK 1279
            GTLSET AATS WGNQPS E+ EKM++++AVARHASLV++L++KLA+AKGK+  AE  L+
Sbjct: 559  GTLSETMAATSRWGNQPSIEEREKMLRDAAVARHASLVKYLDEKLALAKGKVKKAENMLR 618

Query: 1278 KVQGKLEPAELPTDLETLSDEERFLFRKIGLSMKTYLLLGRREVFDGTIENMHLHWKHRE 1099
            K+Q   EP+ELPTDLE LS EERFLFRK+GLSMK +LLLGRR+VFDGTIEN+HLHWK+RE
Sbjct: 619  KLQENREPSELPTDLEILSAEERFLFRKMGLSMKPFLLLGRRDVFDGTIENIHLHWKYRE 678

Query: 1098 LVKIIVKRKSFPQVKHIATSLEAESGGVLVSVDKTVKGYAIIIYRGKNYQRPSTFRPKNL 919
            LVKII +R++  Q+KHIA +LEAESGG+LVS+DKT +GYAII+YRGKNYQRP+ FRPKNL
Sbjct: 679  LVKIIAERRNAAQIKHIAITLEAESGGLLVSIDKTTQGYAIILYRGKNYQRPNEFRPKNL 738

Query: 918  LTKRQALARAIELQRREALKHHISELQEKIEKLKSELEDMKIVKEIDEKTIYSRI 754
            LTKRQALAR+IELQRREALKHHI+ELQ+KI+ LKSELED ++V+EIDE+T++SR+
Sbjct: 739  LTKRQALARSIELQRREALKHHITELQDKIQNLKSELEDTEMVEEIDEETLFSRL 793


>gb|EOY30431.1| CRS1 / YhbY domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|508783176|gb|EOY30432.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|508783177|gb|EOY30433.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao]
          Length = 873

 Score =  846 bits (2185), Expect = 0.0
 Identities = 478/864 (55%), Positives = 592/864 (68%), Gaps = 25/864 (2%)
 Frame = -2

Query: 3231 SPYP--------SSQSLFFLIYQPQLSSAN-SFRNLRLKISCSS-QTIEIGTQENSHTKK 3082
            SP+P        SS+SL+FL+ Q Q    N SFR L+ K SC S QTI++G +      +
Sbjct: 4    SPFPVNHQTFPTSSRSLYFLLLQAQTHCPNNSFRALKFKPSCCSHQTIKVGVE----ITR 59

Query: 3081 RRKPRPSFLDRIQEKWSTKTT-SSRETFPWXXXXXXXXXXXXXXXXESSGVIVAETDSRK 2905
            +RKP+PSFLD+I++KWS K   S+RE FPW                    +  +E D   
Sbjct: 60   KRKPKPSFLDQIKDKWSLKPIISTREKFPWQEKEEFEEEEVERKQSFGGAISESERDEDP 119

Query: 2904 CSELSETASFSSIEKVNLPPWTHGNKHRKSQFVSEARNLDRSNVVPHFNRSGERLDFDEE 2725
              E S+  S S   +V   PW+HG++  +  F          + VP  +    +++ D  
Sbjct: 120  QVEGSDPVSSSFPSRVISAPWSHGSEFNEPHF----------DFVPEISNFESKIE-DSF 168

Query: 2724 IGEKGVEYDS-----IPIGLSKKGQTSVLEEDKRDKSNNSAVEMFQEFNSVKGFND--ST 2566
              EK +E+       +  GL  K ++  L E+         + + +E  +V+G ND  S+
Sbjct: 169  ASEKTIEFPGGNKAEVVGGLIDKSES--LNEEVNINKQKIGLPVGKEVAAVEGLNDVVSS 226

Query: 2565 RRPWERENKR------ESVDRKRVRRGNADLAEKVIPEPELKRLRNVALRMVERIKVGAA 2404
            R  +E  N        E    +  +R N ++ +++IPE E +RLRNVALRMVER KVG A
Sbjct: 227  RENFEVSNSDDEGGSVEGDSGRSKKRSNTEMVDRMIPEHESQRLRNVALRMVERTKVGVA 286

Query: 2403 GVTQGLVDSIQEKWKVDEVVKLKFEGPPSMNMRRTHEILESRTGGMVIWRSGSSIVLYRG 2224
            G+TQ LV+ I E+WK+DEVVKLKFE P S+NM+RTHEILE RTGG+VIWRSGSS+VLYRG
Sbjct: 287  GITQALVEYIHERWKMDEVVKLKFEEPLSLNMKRTHEILEQRTGGLVIWRSGSSLVLYRG 346

Query: 2223 TAYKLDCVQAYNKETQKSATTIESSSGALANDINQSIGVKYFNGAAESSRTDSSKQIYNL 2044
             AYKL CVQ+Y  + +     ++ S+  + +D  Q+I VK      E     SS+ + +L
Sbjct: 347  MAYKLHCVQSYTSQNKVDMNALDCSTN-VESDTTQNIVVKESVRTMECFMPSSSEYLKDL 405

Query: 2043 SRXXXXXXXXXXXXXXXLGPRFKDWSGREPLPVDADLLPAVVPGYRRPFRLLPHGVRQGL 1864
            S+               LGPR+KDWSGREPLPVDADLLP VVPGY+ PFR LP+G+R  L
Sbjct: 406  SKEELMDLCELNHLLDELGPRYKDWSGREPLPVDADLLPPVVPGYQPPFRRLPYGIRHCL 465

Query: 1863 RDKEMTYFRRTARQMPPHFALGRNRELQGLALVMVKLWERSAIAKIAIKRGVQNTCNERM 1684
            +D EMT FRR AR +PPHFALGRNRELQGLA  +VKLWE SAIAKIAIKRGVQNT NERM
Sbjct: 466  KDHEMTTFRRLARTVPPHFALGRNRELQGLAEAIVKLWESSAIAKIAIKRGVQNTRNERM 525

Query: 1683 AEELKVLTGGTLLSRNKEYIVFYRGNDFLPSGVSKALIEKERLSALQQDEEEKARLGAVA 1504
            AEELK LTGGTLLSRNKE+IVFYRGNDFLP  V+K L E+++   LQQ+EEEKAR   +A
Sbjct: 526  AEELKQLTGGTLLSRNKEFIVFYRGNDFLPPVVTKTLKERQKSRNLQQEEEEKARERVLA 585

Query: 1503 LIESNTKATKGTLVAGTLSETKAATSHWGNQPSSEDLEKMMKESAVARHASLVEFLEKKL 1324
            L+ SN KA+K  LVAGTL+ET AATS WG+QPS E++E+M K SA+ + ASLV +LEKKL
Sbjct: 586  LVGSNAKASKLPLVAGTLAETTAATSRWGHQPSIEEVEEMKKNSALTQQASLVRYLEKKL 645

Query: 1323 AIAKGKIANAEKALKKVQGKLEPAELPTDLETLSDEERFLFRKIGLSMKTYLLLGRREVF 1144
            A+A GK+  A KAL KVQ  LEPA+LPTDLETLSDEER LFRKIGLSMK YLLLGRR V+
Sbjct: 646  ALAIGKLRKANKALAKVQKHLEPADLPTDLETLSDEERILFRKIGLSMKPYLLLGRRGVY 705

Query: 1143 DGTIENMHLHWKHRELVKIIVKRKSFPQVKHIATSLEAESGGVLVSVDKTVKGYAIIIYR 964
            DGTIENMHLHWK+RELVKIIVK ++F QVKHIA SLEAESGG+LVS+DKT KGYAIIIYR
Sbjct: 706  DGTIENMHLHWKYRELVKIIVKGENFAQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYR 765

Query: 963  GKNYQRPSTFRPKNLLTKRQALARAIELQRREALKHHISELQEKIEKLKSELEDMKIVKE 784
            GKNY RP   RPKNLLT+RQALAR++ELQRREALKHH+ +LQEKIE +KSELE+MK  KE
Sbjct: 766  GKNYMRPCVLRPKNLLTRRQALARSVELQRREALKHHVLDLQEKIELMKSELEEMKTGKE 825

Query: 783  ID-EKTIYSRIXXXXXXXXDLKEG 715
            ID +KT YSR+        D++EG
Sbjct: 826  IDVDKTSYSRLNKAPLFDEDIEEG 849


>gb|EMJ04994.1| hypothetical protein PRUPE_ppa001111mg [Prunus persica]
          Length = 906

 Score =  837 bits (2163), Expect(2) = 0.0
 Identities = 466/869 (53%), Positives = 592/869 (68%), Gaps = 45/869 (5%)
 Frame = -2

Query: 3231 SPYPSSQSLFFLIYQPQLSSANSFRNLRLKISCSSQTIEIGTQENSH--------TKKRR 3076
            +P+P    L FL+   Q  S  S R LR ++SC  +T+++ TQE           T+K+R
Sbjct: 22   APHP----LCFLLLHHQTHSFKSCRALRFRVSC--KTVQVDTQEQPQRIKVAFEATRKKR 75

Query: 3075 KPRPSFLDRIQEKWSTKTTSSRETFPWXXXXXXXXXXXXXXXXESSGVIVAETDSRKCSE 2896
            KP+PSF ++IQ+KWS K  S R+ FPW                        E +  +   
Sbjct: 76   KPKPSFFEQIQDKWSMKVNSPRDKFPWQKQNELVQEEKEE----------VEEEDEEEEP 125

Query: 2895 LSETASFSSIEKVNLPPWTHGNKHRKSQFVSE----------ARNLD----------RSN 2776
            +++  SFS   ++   PW HG+K    Q  SE           +NLD           S 
Sbjct: 126  VNQKVSFSLPNRIVYAPWAHGSKRITPQVDSEPETSQHSGAQGKNLDGFAGHSEIDTTSG 185

Query: 2775 VVPHFNRSGERLDFD-----EEIGEKGVEYDSIPIGLSKKGQT---------SVLEEDKR 2638
             V +      R D +     E +GE G+    I IG+SKK +          S+ E    
Sbjct: 186  AVKNEKSFERRFDSNRKLERERVGEIGI----ISIGVSKKEEKMISKGLNGISLNETLSG 241

Query: 2637 DKSNNSAVEMFQEFNSVKGFNDSTRRPWERENK--RESVDRKRVRRGNADLAEKVIPEPE 2464
            D  N+  VE F     V   + S R PW+RE++   E  D+ R RR N +LAE+++P+ E
Sbjct: 242  DGENDEKVENF-----VYSGSGSIRLPWKRESELSSEEGDKTRKRRSNTELAERMLPDHE 296

Query: 2463 LKRLRNVALRMVERIKVGAAGVTQGLVDSIQEKWKVDEVVKLKFEGPPSMNMRRTHEILE 2284
            L+RLRNV+LRM+ERIKVG  G+TQ LV++I EKWK+DEVVKLKFE P S+NM+RTHEILE
Sbjct: 297  LRRLRNVSLRMLERIKVGVTGITQALVNTIHEKWKIDEVVKLKFEEPFSLNMKRTHEILE 356

Query: 2283 SRTGGMVIWRSGSSIVLYRGTAYKLDCVQAYNKETQKSATTIESSSGALANDINQSIGVK 2104
            S+TGG+VIWRSGSS+VLYRG  Y L CVQ Y K +Q ++  ++ S  A ++ ++ ++GVK
Sbjct: 357  SKTGGLVIWRSGSSVVLYRGMTYNLPCVQTYAKHSQTNSHMLQHSENATSDSMH-NVGVK 415

Query: 2103 YFNGAAESSRTDSSKQIYNLSRXXXXXXXXXXXXXXXLGPRFKDWSGREPLPVDADLLPA 1924
              +   +    +S++ + +LS+               LGPRFKDW GREPLPVDADLLP+
Sbjct: 416  DVSRTTDFPSLESAEYLKDLSQRELMALNDLNHLLDELGPRFKDWIGREPLPVDADLLPS 475

Query: 1923 VVPGYRRPFRLLPHGVRQGLRDKEMTYFRRTARQMPPHFALGRNRELQGLALVMVKLWER 1744
            VV GY+ PFRLLP+G R  LRDK+MT +RR AR +PPHFALG NRELQGLA  M+KLWE+
Sbjct: 476  VVRGYKTPFRLLPYGFRPCLRDKDMTKYRRLARTVPPHFALGMNRELQGLANAMMKLWEK 535

Query: 1743 SAIAKIAIKRGVQNTCNERMAEELKVLTGGTLLSRNKEYIVFYRGNDFLPSGVSKALIEK 1564
            SAIAKIAIKRGVQNTCNERMAEELK LTGGTLLSRNK++IVFYRGND+LPS V+  L E+
Sbjct: 536  SAIAKIAIKRGVQNTCNERMAEELKRLTGGTLLSRNKDFIVFYRGNDYLPSVVTGVLEER 595

Query: 1563 ERLSALQQDEEEKARLGAVALIESNTKATKGTLVAGTLSETKAATSHWGNQPSSEDLEKM 1384
             +L  LQQDEEE+AR  A   + SN++A+KG  VAGTL+ET AAT+HW NQ + + +EKM
Sbjct: 596  RKLRDLQQDEEEQARQMASDYVVSNSEASKGQFVAGTLAETMAATTHWRNQLTIDKVEKM 655

Query: 1383 MKESAVARHASLVEFLEKKLAIAKGKIANAEKALKKVQGKLEPAELPTDLETLSDEERFL 1204
             ++S  ARHASLV  LEKKLA+ KGK+  AEKAL +VQ  LEP++LP DLETL+DE+RFL
Sbjct: 656  RRDSTFARHASLVRHLEKKLALGKGKLRKAEKALARVQESLEPSDLPDDLETLTDEDRFL 715

Query: 1203 FRKIGLSMKTYLLLGRREVFDGTIENMHLHWKHRELVKIIVKRKSFPQVKHIATSLEAES 1024
            FRKIGLSMK +LLLGRREV+ GTIENMHLHWKH+ELVKIIV+ KSF QVKHIA SLEAES
Sbjct: 716  FRKIGLSMKPFLLLGRREVYSGTIENMHLHWKHKELVKIIVRGKSFEQVKHIAISLEAES 775

Query: 1023 GGVLVSVDKTVKGYAIIIYRGKNYQRPSTFRPKNLLTKRQALARAIELQRREALKHHISE 844
            GGVLVS+DKT KGYAII+YRGKNYQ P   RP+NLLT+RQALAR++ELQRREALKHHIS+
Sbjct: 776  GGVLVSLDKTTKGYAIILYRGKNYQCPLPLRPRNLLTRRQALARSVELQRREALKHHISD 835

Query: 843  LQEKIEKLKSELEDMKIVKEIDE-KTIYS 760
            LQEK+  LKSELE+M   + +D+ +T++S
Sbjct: 836  LQEKVGLLKSELEEMGNGRMVDDGRTLHS 864



 Score = 23.9 bits (50), Expect(2) = 0.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 722 KRDESEEVYLETYLTDAED 666
           + DE EE YLE Y +  ED
Sbjct: 877 EEDEGEEAYLEVYDSGNED 895


>ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
            gi|223546576|gb|EEF48074.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 930

 Score =  830 bits (2143), Expect = 0.0
 Identities = 471/894 (52%), Positives = 594/894 (66%), Gaps = 51/894 (5%)
 Frame = -2

Query: 3243 LPTPSPYPSSQSLFFLIYQPQLSSANSFRNLRLKISCS-SQTIEIGTQENSHTKKRRKPR 3067
            L T S   SS+   FL    Q  S + F+    + +CS S++I++     S TK +RKPR
Sbjct: 34   LSTSSSSSSSRYPLFL----QARSHSPFKAFNFETNCSYSRSIQV-----SATKTKRKPR 84

Query: 3066 PSFLDRIQEKWSTKTTSSRETFPWXXXXXXXXXXXXXXXXES-------SGVIV--AETD 2914
            PSF ++I++KWS K  S+R+TFPW                E        SGV +  AE D
Sbjct: 85   PSFFEQIRDKWSLKVPSTRDTFPWQEPEQQQEHQGQGKNDEEEIERCEISGVTLSKAEID 144

Query: 2913 SRKCSELSETASFSSIEKVNLPPWTHGNKHRKSQFVSEAR------------------NL 2788
            +   S   ++ S S    +   PW HG + +K+ F S  +                  NL
Sbjct: 145  ANPSSIDDDSVSVSLPNHLTTAPWVHGTRPKKNHFSSRPKIGENVVQNDVHTVVDIVENL 204

Query: 2787 DRS-----------NV--VPHFNRSGERLDFDEEIGEKGVEYDSIPIGLSKKGQT----- 2662
            ++            N+  V +  R  + +++D++  E  V+     + L +  +      
Sbjct: 205  EKEVTCNDKFKKEDNILHVDNAERLVKEVNYDKKFKEAKVQVGGFSVELKRDNEIARAKY 264

Query: 2661 ----SVLEEDKRDKSNNSAVEMFQEFNSVKGFNDSTRRPWERENKRESVDRK-RVRRGNA 2497
                S + E     +    V++  + NS      S   PWE+E   ESV+   R +R N 
Sbjct: 265  SKSPSYINEKPFGANGGYGVQVSYDDNS-----SSIELPWEKERVMESVEGYLRGKRSNT 319

Query: 2496 DLAEKVIPEPELKRLRNVALRMVERIKVGAAGVTQGLVDSIQEKWKVDEVVKLKFEGPPS 2317
            +LAE+++PE ELKRLRNVALRM ERIKVGAAG+ Q LVD++ EKW++DEVVKLKFE P S
Sbjct: 320  ELAERMLPEHELKRLRNVALRMYERIKVGAAGINQDLVDAVHEKWRLDEVVKLKFEEPLS 379

Query: 2316 MNMRRTHEILESRTGGMVIWRSGSSIVLYRGTAYKLDCVQAYNKETQKSATTIESSSGAL 2137
             NMRRTHEILE+RTGG+VIWRSGSS+VLYRG +YKL CV++++K+ +     +       
Sbjct: 380  FNMRRTHEILENRTGGLVIWRSGSSVVLYRGISYKLHCVRSFSKQDEAGKEILAHPEEVT 439

Query: 2136 ANDINQSIGVKYFNGAAESSRTDSSKQIYNLSRXXXXXXXXXXXXXXXLGPRFKDWSGRE 1957
            +N    +IGVK+F G  ES   D +K + +LSR               LGPRF+DW GRE
Sbjct: 440  SN-ATLNIGVKHFIGTTESYIPDRAKYLKDLSREELTDFTELNQFLDELGPRFEDWCGRE 498

Query: 1956 PLPVDADLLPAVVPGYRRPFRLLPHGVRQGLRDKEMTYFRRTARQMPPHFALGRNRELQG 1777
            PLPVDADLL AV PGY+ PFRLLP+GVR  L DKEMT FRR AR +PPHFALGRNR+LQG
Sbjct: 499  PLPVDADLLLAVDPGYKPPFRLLPYGVRHCLTDKEMTIFRRLARTVPPHFALGRNRQLQG 558

Query: 1776 LALVMVKLWERSAIAKIAIKRGVQNTCNERMAEELKVLTGGTLLSRNKEYIVFYRGNDFL 1597
            LA  +VKLWERSAI KIAIKRGVQNT NERMAEELKVLTGG LLSRNKEYIVFYRGNDFL
Sbjct: 559  LAKAIVKLWERSAIVKIAIKRGVQNTRNERMAEELKVLTGGILLSRNKEYIVFYRGNDFL 618

Query: 1596 PSGVSKALIEKERLSALQQDEEEKARLGAVALIESNTKATKGTLVAGTLSETKAATSHWG 1417
            P  + K L E+++L+ L+QDEEE+AR  A+A +ES+ K +K  LVAGTL+ET AATSHW 
Sbjct: 619  PPAIVKTLKERKKLTYLKQDEEEQARQMALASVESSAKTSKVPLVAGTLAETVAATSHWR 678

Query: 1416 NQPSSEDLEKMMKESAVARHASLVEFLEKKLAIAKGKIANAEKALKKVQGKLEPAELPTD 1237
            +Q  S D+++M++E+ +A+ ASLV+ LE KLA+AKGK+  AEKAL KV   L+P+ LPTD
Sbjct: 679  DQRGSPDIDEMLREAVLAKRASLVKHLENKLALAKGKLRKAEKALAKVHEHLDPSGLPTD 738

Query: 1236 LETLSDEERFLFRKIGLSMKTYLLLGRREVFDGTIENMHLHWKHRELVKIIVKRKSFPQV 1057
            LET+SDEERFLFRKIGLSMK YL LG+R V+DGTIENMHLHWK+RELVK+IV+ KSF QV
Sbjct: 739  LETISDEERFLFRKIGLSMKPYLFLGKRGVYDGTIENMHLHWKYRELVKVIVRGKSFAQV 798

Query: 1056 KHIATSLEAESGGVLVSVDKTVKGYAIIIYRGKNYQRPSTFRPKNLLTKRQALARAIELQ 877
            KHIA SLEAESGGVLVS+++T KGYAII+YRGKNY  P   RPKNLLTKRQAL R+IELQ
Sbjct: 799  KHIAISLEAESGGVLVSIERTTKGYAIIVYRGKNYLHPEVMRPKNLLTKRQALVRSIELQ 858

Query: 876  RREALKHHISELQEKIEKLKSELEDMKIVKEIDEKTIYSRIXXXXXXXXDLKEG 715
            RREALKHHIS+LQE+IE LK ELEDM+  KEID   + SR+        D++EG
Sbjct: 859  RREALKHHISDLQERIELLKLELEDMESGKEIDVDKMSSRLDDSSISDSDVEEG 912


>gb|EOY30434.1| CRS1 / YhbY domain-containing protein, putative isoform 4 [Theobroma
            cacao]
          Length = 818

 Score =  825 bits (2132), Expect = 0.0
 Identities = 463/833 (55%), Positives = 573/833 (68%), Gaps = 24/833 (2%)
 Frame = -2

Query: 3231 SPYP--------SSQSLFFLIYQPQLSSAN-SFRNLRLKISCSS-QTIEIGTQENSHTKK 3082
            SP+P        SS+SL+FL+ Q Q    N SFR L+ K SC S QTI++G +      +
Sbjct: 4    SPFPVNHQTFPTSSRSLYFLLLQAQTHCPNNSFRALKFKPSCCSHQTIKVGVE----ITR 59

Query: 3081 RRKPRPSFLDRIQEKWSTKTT-SSRETFPWXXXXXXXXXXXXXXXXESSGVIVAETDSRK 2905
            +RKP+PSFLD+I++KWS K   S+RE FPW                    +  +E D   
Sbjct: 60   KRKPKPSFLDQIKDKWSLKPIISTREKFPWQEKEEFEEEEVERKQSFGGAISESERDEDP 119

Query: 2904 CSELSETASFSSIEKVNLPPWTHGNKHRKSQFVSEARNLDRSNVVPHFNRSGERLDFDEE 2725
              E S+  S S   +V   PW+HG++  +  F          + VP  +    +++ D  
Sbjct: 120  QVEGSDPVSSSFPSRVISAPWSHGSEFNEPHF----------DFVPEISNFESKIE-DSF 168

Query: 2724 IGEKGVEYDS-----IPIGLSKKGQTSVLEEDKRDKSNNSAVEMFQEFNSVKGFND--ST 2566
              EK +E+       +  GL  K ++  L E+         + + +E  +V+G ND  S+
Sbjct: 169  ASEKTIEFPGGNKAEVVGGLIDKSES--LNEEVNINKQKIGLPVGKEVAAVEGLNDVVSS 226

Query: 2565 RRPWERENKR------ESVDRKRVRRGNADLAEKVIPEPELKRLRNVALRMVERIKVGAA 2404
            R  +E  N        E    +  +R N ++ +++IPE E +RLRNVALRMVER KVG A
Sbjct: 227  RENFEVSNSDDEGGSVEGDSGRSKKRSNTEMVDRMIPEHESQRLRNVALRMVERTKVGVA 286

Query: 2403 GVTQGLVDSIQEKWKVDEVVKLKFEGPPSMNMRRTHEILESRTGGMVIWRSGSSIVLYRG 2224
            G+TQ LV+ I E+WK+DEVVKLKFE P S+NM+RTHEILE RTGG+VIWRSGSS+VLYRG
Sbjct: 287  GITQALVEYIHERWKMDEVVKLKFEEPLSLNMKRTHEILEQRTGGLVIWRSGSSLVLYRG 346

Query: 2223 TAYKLDCVQAYNKETQKSATTIESSSGALANDINQSIGVKYFNGAAESSRTDSSKQIYNL 2044
             AYKL CVQ+Y  + +     ++ S+  + +D  Q+I VK      E     SS+ + +L
Sbjct: 347  MAYKLHCVQSYTSQNKVDMNALDCSTN-VESDTTQNIVVKESVRTMECFMPSSSEYLKDL 405

Query: 2043 SRXXXXXXXXXXXXXXXLGPRFKDWSGREPLPVDADLLPAVVPGYRRPFRLLPHGVRQGL 1864
            S+               LGPR+KDWSGREPLPVDADLLP VVPGY+ PFR LP+G+R  L
Sbjct: 406  SKEELMDLCELNHLLDELGPRYKDWSGREPLPVDADLLPPVVPGYQPPFRRLPYGIRHCL 465

Query: 1863 RDKEMTYFRRTARQMPPHFALGRNRELQGLALVMVKLWERSAIAKIAIKRGVQNTCNERM 1684
            +D EMT FRR AR +PPHFALGRNRELQGLA  +VKLWE SAIAKIAIKRGVQNT NERM
Sbjct: 466  KDHEMTTFRRLARTVPPHFALGRNRELQGLAEAIVKLWESSAIAKIAIKRGVQNTRNERM 525

Query: 1683 AEELKVLTGGTLLSRNKEYIVFYRGNDFLPSGVSKALIEKERLSALQQDEEEKARLGAVA 1504
            AEELK LTGGTLLSRNKE+IVFYRGNDFLP  V+K L E+++   LQQ+EEEKAR   +A
Sbjct: 526  AEELKQLTGGTLLSRNKEFIVFYRGNDFLPPVVTKTLKERQKSRNLQQEEEEKARERVLA 585

Query: 1503 LIESNTKATKGTLVAGTLSETKAATSHWGNQPSSEDLEKMMKESAVARHASLVEFLEKKL 1324
            L+ SN KA+K  LVAGTL+ET AATS WG+QPS E++E+M K SA+ + ASLV +LEKKL
Sbjct: 586  LVGSNAKASKLPLVAGTLAETTAATSRWGHQPSIEEVEEMKKNSALTQQASLVRYLEKKL 645

Query: 1323 AIAKGKIANAEKALKKVQGKLEPAELPTDLETLSDEERFLFRKIGLSMKTYLLLGRREVF 1144
            A+A GK+  A KAL KVQ  LEPA+LPTDLETLSDEER LFRKIGLSMK YLLLGRR V+
Sbjct: 646  ALAIGKLRKANKALAKVQKHLEPADLPTDLETLSDEERILFRKIGLSMKPYLLLGRRGVY 705

Query: 1143 DGTIENMHLHWKHRELVKIIVKRKSFPQVKHIATSLEAESGGVLVSVDKTVKGYAIIIYR 964
            DGTIENMHLHWK+RELVKIIVK ++F QVKHIA SLEAESGG+LVS+DKT KGYAIIIYR
Sbjct: 706  DGTIENMHLHWKYRELVKIIVKGENFAQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYR 765

Query: 963  GKNYQRPSTFRPKNLLTKRQALARAIELQRREALKHHISELQEKIEKLKSELE 805
            GKNY RP   RPKNLLT+RQALAR++ELQRREALKHH+ +LQEKIE +KSEL+
Sbjct: 766  GKNYMRPCVLRPKNLLTRRQALARSVELQRREALKHHVLDLQEKIELMKSELK 818


>gb|EOY30435.1| CRS1 / YhbY domain-containing protein, putative isoform 5 [Theobroma
            cacao] gi|508783180|gb|EOY30436.1| CRS1 / YhbY
            domain-containing protein, putative isoform 5 [Theobroma
            cacao]
          Length = 822

 Score =  825 bits (2131), Expect = 0.0
 Identities = 463/832 (55%), Positives = 572/832 (68%), Gaps = 24/832 (2%)
 Frame = -2

Query: 3231 SPYP--------SSQSLFFLIYQPQLSSAN-SFRNLRLKISCSS-QTIEIGTQENSHTKK 3082
            SP+P        SS+SL+FL+ Q Q    N SFR L+ K SC S QTI++G +      +
Sbjct: 4    SPFPVNHQTFPTSSRSLYFLLLQAQTHCPNNSFRALKFKPSCCSHQTIKVGVE----ITR 59

Query: 3081 RRKPRPSFLDRIQEKWSTKTT-SSRETFPWXXXXXXXXXXXXXXXXESSGVIVAETDSRK 2905
            +RKP+PSFLD+I++KWS K   S+RE FPW                    +  +E D   
Sbjct: 60   KRKPKPSFLDQIKDKWSLKPIISTREKFPWQEKEEFEEEEVERKQSFGGAISESERDEDP 119

Query: 2904 CSELSETASFSSIEKVNLPPWTHGNKHRKSQFVSEARNLDRSNVVPHFNRSGERLDFDEE 2725
              E S+  S S   +V   PW+HG++  +  F          + VP  +    +++ D  
Sbjct: 120  QVEGSDPVSSSFPSRVISAPWSHGSEFNEPHF----------DFVPEISNFESKIE-DSF 168

Query: 2724 IGEKGVEYDS-----IPIGLSKKGQTSVLEEDKRDKSNNSAVEMFQEFNSVKGFND--ST 2566
              EK +E+       +  GL  K ++  L E+         + + +E  +V+G ND  S+
Sbjct: 169  ASEKTIEFPGGNKAEVVGGLIDKSES--LNEEVNINKQKIGLPVGKEVAAVEGLNDVVSS 226

Query: 2565 RRPWERENKR------ESVDRKRVRRGNADLAEKVIPEPELKRLRNVALRMVERIKVGAA 2404
            R  +E  N        E    +  +R N ++ +++IPE E +RLRNVALRMVER KVG A
Sbjct: 227  RENFEVSNSDDEGGSVEGDSGRSKKRSNTEMVDRMIPEHESQRLRNVALRMVERTKVGVA 286

Query: 2403 GVTQGLVDSIQEKWKVDEVVKLKFEGPPSMNMRRTHEILESRTGGMVIWRSGSSIVLYRG 2224
            G+TQ LV+ I E+WK+DEVVKLKFE P S+NM+RTHEILE RTGG+VIWRSGSS+VLYRG
Sbjct: 287  GITQALVEYIHERWKMDEVVKLKFEEPLSLNMKRTHEILEQRTGGLVIWRSGSSLVLYRG 346

Query: 2223 TAYKLDCVQAYNKETQKSATTIESSSGALANDINQSIGVKYFNGAAESSRTDSSKQIYNL 2044
             AYKL CVQ+Y  + +     ++ S+  + +D  Q+I VK      E     SS+ + +L
Sbjct: 347  MAYKLHCVQSYTSQNKVDMNALDCSTN-VESDTTQNIVVKESVRTMECFMPSSSEYLKDL 405

Query: 2043 SRXXXXXXXXXXXXXXXLGPRFKDWSGREPLPVDADLLPAVVPGYRRPFRLLPHGVRQGL 1864
            S+               LGPR+KDWSGREPLPVDADLLP VVPGY+ PFR LP+G+R  L
Sbjct: 406  SKEELMDLCELNHLLDELGPRYKDWSGREPLPVDADLLPPVVPGYQPPFRRLPYGIRHCL 465

Query: 1863 RDKEMTYFRRTARQMPPHFALGRNRELQGLALVMVKLWERSAIAKIAIKRGVQNTCNERM 1684
            +D EMT FRR AR +PPHFALGRNRELQGLA  +VKLWE SAIAKIAIKRGVQNT NERM
Sbjct: 466  KDHEMTTFRRLARTVPPHFALGRNRELQGLAEAIVKLWESSAIAKIAIKRGVQNTRNERM 525

Query: 1683 AEELKVLTGGTLLSRNKEYIVFYRGNDFLPSGVSKALIEKERLSALQQDEEEKARLGAVA 1504
            AEELK LTGGTLLSRNKE+IVFYRGNDFLP  V+K L E+++   LQQ+EEEKAR   +A
Sbjct: 526  AEELKQLTGGTLLSRNKEFIVFYRGNDFLPPVVTKTLKERQKSRNLQQEEEEKARERVLA 585

Query: 1503 LIESNTKATKGTLVAGTLSETKAATSHWGNQPSSEDLEKMMKESAVARHASLVEFLEKKL 1324
            L+ SN KA+K  LVAGTL+ET AATS WG+QPS E++E+M K SA+ + ASLV +LEKKL
Sbjct: 586  LVGSNAKASKLPLVAGTLAETTAATSRWGHQPSIEEVEEMKKNSALTQQASLVRYLEKKL 645

Query: 1323 AIAKGKIANAEKALKKVQGKLEPAELPTDLETLSDEERFLFRKIGLSMKTYLLLGRREVF 1144
            A+A GK+  A KAL KVQ  LEPA+LPTDLETLSDEER LFRKIGLSMK YLLLGRR V+
Sbjct: 646  ALAIGKLRKANKALAKVQKHLEPADLPTDLETLSDEERILFRKIGLSMKPYLLLGRRGVY 705

Query: 1143 DGTIENMHLHWKHRELVKIIVKRKSFPQVKHIATSLEAESGGVLVSVDKTVKGYAIIIYR 964
            DGTIENMHLHWK+RELVKIIVK ++F QVKHIA SLEAESGG+LVS+DKT KGYAIIIYR
Sbjct: 706  DGTIENMHLHWKYRELVKIIVKGENFAQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYR 765

Query: 963  GKNYQRPSTFRPKNLLTKRQALARAIELQRREALKHHISELQEKIEKLKSEL 808
            GKNY RP   RPKNLLT+RQALAR++ELQRREALKHH+ +LQEKIE +KSEL
Sbjct: 766  GKNYMRPCVLRPKNLLTRRQALARSVELQRREALKHHVLDLQEKIELMKSEL 817


>gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 859

 Score =  814 bits (2102), Expect = 0.0
 Identities = 452/842 (53%), Positives = 561/842 (66%), Gaps = 17/842 (2%)
 Frame = -2

Query: 3246 FLPTPSPYPSSQS---LFFLIYQPQLSSANSFRNLRLKISCSSQTIEIGTQEN------- 3097
            F   PS +PSS S   L FL+ Q Q   + + + L+ +IS S + +++ +++        
Sbjct: 6    FSLNPSTFPSSSSSHSLHFLLLQRQTHFSKTSKPLKFRISSSQRVVQVASEQQPQRVKLA 65

Query: 3096 ----SHTKKRRKPRPSFLDRIQEKWSTKTTSSRETFPWXXXXXXXXXXXXXXXXESSGVI 2929
                  TKK+RKP+PSF ++IQEKWS K  S+RE FPW                E     
Sbjct: 66   LETTKQTKKKRKPKPSFFEQIQEKWSAKIGSTREKFPWQEESSQDEQEGDNEEEER---- 121

Query: 2928 VAETDSRKCSELSETASFSSIEKVNLPPWTHGNKHRKSQFVSEARNLDRSNVVPHFNRSG 2749
              ET+       S++ SF     V   PW HG K  K   VSE   L++S+     N   
Sbjct: 122  --ETEIDVKESASDSVSFGGKNGVVSAPWAHGTKPFKPHVVSEPETLEKSD-----NGDF 174

Query: 2748 ERLDFDEEIGEKGVEYDSIPIGLSKKGQTSVLEEDKRDKSNNSAVEMFQEFNSVKGFNDS 2569
            +R +FD    E   E   I   +        +EE    KSN+                  
Sbjct: 175  QR-EFDVGRDEISEEESEISNNVMNGFSLDDVEESSDYKSNDL----------------- 216

Query: 2568 TRRPWERENKRESVDRKRV---RRGNADLAEKVIPEPELKRLRNVALRMVERIKVGAAGV 2398
               PW++  K ES + ++    RR N  +AEK +PE ELKRLRNV+LRM+ER KVGA G+
Sbjct: 217  ---PWKKAGKAESREGEKAAAKRRSNTAMAEKTLPEHELKRLRNVSLRMLERRKVGARGI 273

Query: 2397 TQGLVDSIQEKWKVDEVVKLKFEGPPSMNMRRTHEILESRTGGMVIWRSGSSIVLYRGTA 2218
            TQ LVDSI EKWK+DEVVKLKFE P S+NMRRTHEILES+TGG+VIWRSGSS+VLYRG  
Sbjct: 274  TQALVDSIHEKWKLDEVVKLKFEEPLSLNMRRTHEILESKTGGLVIWRSGSSVVLYRGMT 333

Query: 2217 YKLDCVQAYNKETQKSATTIESSSGALANDINQSIGVKYFNGAAESSRTDSSKQIYNLSR 2038
            Y L CVQ+Y KE Q  +  + +      +DI     VK      ESS   S K++  LS 
Sbjct: 334  YNLLCVQSYTKENQSDSMKLPALEDG-KSDIVHDKQVKVSIRTMESSTPISVKKVKGLSE 392

Query: 2037 XXXXXXXXXXXXXXXLGPRFKDWSGREPLPVDADLLPAVVPGYRRPFRLLPHGVRQGLRD 1858
                           LGPRF DW GREPLPVDADLLP VVP YR PFR+LP+GV++ + +
Sbjct: 393  GETMQLNDLNQLLDELGPRFTDWLGREPLPVDADLLPPVVPDYRTPFRILPYGVKRCVGN 452

Query: 1857 KEMTYFRRTARQMPPHFALGRNRELQGLALVMVKLWERSAIAKIAIKRGVQNTCNERMAE 1678
            KEMT  RRTAR +PPHFALGRNRELQGLA  MV+LWE+SAIAKIAIKRGVQNTCNERMAE
Sbjct: 453  KEMTKLRRTARMIPPHFALGRNRELQGLAKAMVRLWEKSAIAKIAIKRGVQNTCNERMAE 512

Query: 1677 ELKVLTGGTLLSRNKEYIVFYRGNDFLPSGVSKALIEKERLSALQQDEEEKARLGAVALI 1498
            ELK LTGGTLLSRNK++I+FYRGNDF+P  V  +L E+ +L  LQQDEEEK R  A A I
Sbjct: 513  ELKRLTGGTLLSRNKDFIIFYRGNDFMPPVVVGSLKERRKLRDLQQDEEEKVRQMAPAFI 572

Query: 1497 ESNTKATKGTLVAGTLSETKAATSHWGNQPSSEDLEKMMKESAVARHASLVEFLEKKLAI 1318
            +S ++A    LVAGTL+ET AAT+ WGNQ S  D+E MMK+S +ARHAS++  LE+KLA+
Sbjct: 573  QSKSQACINQLVAGTLAETMAATARWGNQQSPVDVEMMMKDSTLARHASIIRHLERKLAL 632

Query: 1317 AKGKIANAEKALKKVQGKLEPAELPTDLETLSDEERFLFRKIGLSMKTYLLLGRREVFDG 1138
            AKG +  AEKAL KVQ  ++P++LP DLET++DEERFLFRKIGLSM+ +LLLGRR ++ G
Sbjct: 633  AKGNLTKAEKALAKVQENMDPSDLPNDLETITDEERFLFRKIGLSMEPFLLLGRRGLYSG 692

Query: 1137 TIENMHLHWKHRELVKIIVKRKSFPQVKHIATSLEAESGGVLVSVDKTVKGYAIIIYRGK 958
            TIENMHLHWK+RELVKIIV+ KSF  VK IA SLEAESGGVLVS+DKT+KGYAI++YRGK
Sbjct: 693  TIENMHLHWKYRELVKIIVRGKSFEHVKQIAISLEAESGGVLVSIDKTIKGYAILVYRGK 752

Query: 957  NYQRPSTFRPKNLLTKRQALARAIELQRREALKHHISELQEKIEKLKSELEDMKIVKEID 778
            NYQ P   RP+NLLT+RQALAR++ELQRREAL+HHI+ELQE+I  LKSEL++ +  K +D
Sbjct: 753  NYQSPLKIRPQNLLTRRQALARSVELQRREALQHHIAELQERIGLLKSELDESRNGKIVD 812

Query: 777  EK 772
             +
Sbjct: 813  NE 814


>ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 846

 Score =  804 bits (2077), Expect = 0.0
 Identities = 432/835 (51%), Positives = 562/835 (67%), Gaps = 25/835 (2%)
 Frame = -2

Query: 3225 YPSSQSLFFLIYQPQLSSANSFRNLRLKISCSSQTIEIGTQE------NSHTKKRRKPRP 3064
            + SS S  F++   Q+ S+  F   R KI CS+ TI++ TQ       +   KK+RKPRP
Sbjct: 20   HSSSLSFHFILRHSQIPSSIIFTPQRFKIHCSNNTIQVETQPPRRIRVDFEVKKKRKPRP 79

Query: 3063 SFLDRIQEKWSTKTTSSRETFPWXXXXXXXXXXXXXXXXESSGVIVAETDSRKCS----- 2899
            SFL++I+ KWSTK  SS  TFPW                E       E  + + S     
Sbjct: 80   SFLEQIRHKWSTKPISSTHTFPWQQQEQDRHHKQDEGEGEEEEEEEEEQVANQTSVSIPE 139

Query: 2898 ELSETASFSSIEKVNLPPWTHGNKHRKSQFVSEAR--------NLDRSNVVPHFNRSGER 2743
              ++      I +    PW HG++ R +QF  + +         + + +     NR+   
Sbjct: 140  STTDVTQAVPITRSISAPWAHGSQSRNTQFDFKPKTPNGEVINEISKISTDDTSNRNAST 199

Query: 2742 LDFDE---EIGEKGVEYDSIPIGLSKKGQT---SVLEEDKRDKSNNSAVEMFQEFNSVKG 2581
            +  DE   +  E   E D++ + +++K  T    ++     D  +N  V++         
Sbjct: 200  ISIDEISDDSSEDEAEIDTVVLPVTEKRSTLSKKIVHSVSSDNDDNGRVDL--------- 250

Query: 2580 FNDSTRRPWERENKRESVDRKRVRRGNADLAEKVIPEPELKRLRNVALRMVERIKVGAAG 2401
                   PW+RE +R+S      RR    LAE+++PE EL+RLRN++LRMVERI+VG  G
Sbjct: 251  -------PWKREPRRDSEVDAGQRRSKTLLAEQMLPEHELRRLRNISLRMVERIEVGVKG 303

Query: 2400 VTQGLVDSIQEKWKVDEVVKLKFEGPPSMNMRRTHEILESRTGGMVIWRSGSSIVLYRGT 2221
            +TQ L+DSI EKWKVDEVVKLKFEGP ++NM+R HE LE+RTGG+VIWRSGS IVLYRG 
Sbjct: 304  ITQELLDSIHEKWKVDEVVKLKFEGPLTVNMKRAHEKLENRTGGLVIWRSGSLIVLYRGM 363

Query: 2220 AYKLDCVQAYNKETQKSATTIESSSGALANDINQSIGVKYFNGAAESSRTDSSKQIYNLS 2041
             Y L CVQ+Y K+ Q  + T++  +   ++DI ++  +    G   +  + +SK    LS
Sbjct: 364  TYHLPCVQSYAKQNQAKSNTLDVPNNVESDDITRNEKLHTTVGTMSTIVSGASKHTKTLS 423

Query: 2040 RXXXXXXXXXXXXXXXLGPRFKDWSGREPLPVDADLLPAVVPGYRRPFRLLPHGVRQGLR 1861
            +               +GPRFKDWSG EP+PVDADLLP +VPGY+ P R+LP+GVR  LR
Sbjct: 424  KKELMELSDLNHLLDEIGPRFKDWSGCEPVPVDADLLPGIVPGYKPPTRILPYGVRHCLR 483

Query: 1860 DKEMTYFRRTARQMPPHFALGRNRELQGLALVMVKLWERSAIAKIAIKRGVQNTCNERMA 1681
            +KE+T FRR AR+MPPHFALGRNR+LQGLA  MVKLWE+ AIAKIAIKRGV+NT NERMA
Sbjct: 484  NKEVTIFRRLARKMPPHFALGRNRQLQGLANAMVKLWEKCAIAKIAIKRGVENTRNERMA 543

Query: 1680 EELKVLTGGTLLSRNKEYIVFYRGNDFLPSGVSKALIEKERLSALQQDEEEKARLGAVAL 1501
            EEL++LTGGTLLSRNKEYIVFYRGND+LP  +++AL E+ +L+  QQD EE+ R  A A 
Sbjct: 544  EELRILTGGTLLSRNKEYIVFYRGNDYLPPTITEALKERRKLADRQQDVEEQVRQVASAA 603

Query: 1500 IESNTKATKGTLVAGTLSETKAATSHWGNQPSSEDLEKMMKESAVARHASLVEFLEKKLA 1321
            IES  KA+   LVAGTL+ET AATS WG+QPS  D+E M ++SA+A+  SL+E+L+KKLA
Sbjct: 604  IESKVKASNAPLVAGTLTETIAATSRWGSQPSGHDIENMREDSALAKLDSLIEYLKKKLA 663

Query: 1320 IAKGKIANAEKALKKVQGKLEPAELPTDLETLSDEERFLFRKIGLSMKTYLLLGRREVFD 1141
            +AK K+ NAEK + K+Q K EP++LPTDLET++DEER LFRKIGLSMK YLLLGRR V+D
Sbjct: 664  LAKCKVKNAEKIIAKLQEKKEPSDLPTDLETITDEERLLFRKIGLSMKPYLLLGRRGVYD 723

Query: 1140 GTIENMHLHWKHRELVKIIVKRKSFPQVKHIATSLEAESGGVLVSVDKTVKGYAIIIYRG 961
            GT+ENMHLHWK RELVKIIV+ K+  QVKH+A SLEAES GV++S+DKT KGY +I+YRG
Sbjct: 724  GTVENMHLHWKFRELVKIIVRGKTLQQVKHVAISLEAESNGVVISLDKTTKGYEVIVYRG 783

Query: 960  KNYQRPSTFRPKNLLTKRQALARAIELQRREALKHHISELQEKIEKLKSELEDMK 796
            KNY RP   RPKN+LT+RQALAR+IELQRREALKHHI +L+EKIE LK+ELE+ K
Sbjct: 784  KNYTRPDAMRPKNMLTRRQALARSIELQRREALKHHILDLEEKIELLKAELEERK 838


>ref|XP_006475466.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568843115|ref|XP_006475467.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
            gi|568843117|ref|XP_006475468.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Citrus sinensis]
            gi|568843119|ref|XP_006475469.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 812

 Score =  786 bits (2030), Expect = 0.0
 Identities = 441/841 (52%), Positives = 560/841 (66%), Gaps = 23/841 (2%)
 Frame = -2

Query: 3249 KFLPTPSPYPSSQSLFFLIYQPQLSSANSFRNLRLKISCSSQTIE--IGTQENSHTKKRR 3076
            K+ P   P     ++ +L  +PQ   +NSFR++R+ I  S  TI+  +GT     T+ +R
Sbjct: 12   KYSPLTQP-----AVHYLPLKPQSQCSNSFRSIRIGICFSHLTIQAQLGT-----TRTKR 61

Query: 3075 KPRPSFLDRIQEKWSTKTTSSRETFPWXXXXXXXXXXXXXXXXESSGVIVAETDSRKCSE 2896
            K +PSF ++I+ KWS K  S RE FPW                        ETD  +   
Sbjct: 62   KVKPSFFEQIRHKWSHKVISPREKFPWQEEEEEEEEVQNE----------PETDV-ESRV 110

Query: 2895 LSETASFSSIEKVNLPPWTHGNKHRKSQF-------VSEARNLDRSNVVPHFNRS----- 2752
             SE  S +   +    PW HG   ++ +F        ++  ++    ++  F ++     
Sbjct: 111  RSEPFSSALPNRFVSAPWIHGTDSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTVVHSA 170

Query: 2751 ---------GERLDFDEEIGEKGVEYDSIPIGLSKKGQTSVLEEDKRDKSNNSAVEMFQE 2599
                      +  D+++E+    V+ D+ PI LSK     V         N   ++ + E
Sbjct: 171  VKEKTVIELDKEGDYNKELKTDEVKIDANPIELSKDRHREV------GSLNQKQIKGYHE 224

Query: 2598 FNSVKGFNDSTRRPWERENKRESVDRKRVRRGNADLAEKVIPEPELKRLRNVALRMVERI 2419
                   +D +  PW+R   R        RR N +LAEK+IPE EL+RLRN++LRM+ER 
Sbjct: 225  ------VDDPSVLPWKRNTDRR-------RRSNTELAEKMIPEHELQRLRNISLRMLERT 271

Query: 2418 KVGAAGVTQGLVDSIQEKWKVDEVVKLKFEGPPSMNMRRTHEILESRTGGMVIWRSGSSI 2239
            KVG+AG+TQ LVDSI EKWK+DEVVKLKFE P S+ M+RTHEILE RTGG+VIWRSGSS+
Sbjct: 272  KVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSV 331

Query: 2238 VLYRGTAYKLDCVQAYNKETQKSATTIESSSGALANDINQSIGVKYFNGAAESSRTDSSK 2059
            VL+RG AYKL CVQ++ K      T        + N++ +++G      A ES   DS+ 
Sbjct: 332  VLFRGMAYKLPCVQSFTKHNHTQQTQ------DVTNEVMRNVGEHPPRSAMESYVPDSAN 385

Query: 2058 QIYNLSRXXXXXXXXXXXXXXXLGPRFKDWSGREPLPVDADLLPAVVPGYRRPFRLLPHG 1879
             + NLS+               LGPRFKDW GREPLPVDADLLP VVP Y+ P RLLP+G
Sbjct: 386  NLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYG 445

Query: 1878 VRQGLRDKEMTYFRRTARQMPPHFALGRNRELQGLALVMVKLWERSAIAKIAIKRGVQNT 1699
            ++ GLRD E T FRR AR+ PPHFALGRNRELQGLA  MVKLWE+SAIAKIAIKR V NT
Sbjct: 446  IKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNT 505

Query: 1698 CNERMAEELKVLTGGTLLSRNKEYIVFYRGNDFLPSGVSKALIEKERLSALQQDEEEKAR 1519
             NERMAEELK LTGGTLL RNK+YIVFYRGNDFLP  V+ A+ E+ +L+ ++QDEEE+AR
Sbjct: 506  RNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEEQAR 565

Query: 1518 LGAVALIESNTKATKGTLVAGTLSETKAATSHWGNQPSSEDLEKMMKESAVARHASLVEF 1339
              A ALIE   K   G+LVAGTL+ET AATS WG QPS ED+EKMM++S ++RHASL+ +
Sbjct: 566  HVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRY 625

Query: 1338 LEKKLAIAKGKIANAEKALKKVQGKLEPAELPTDLETLSDEERFLFRKIGLSMKTYLLLG 1159
            LE+KLA+AK K+  A+KAL KVQ  L+PAELP+DLET+++EERFL RK+GLSMK YLLLG
Sbjct: 626  LEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLG 685

Query: 1158 RREVFDGTIENMHLHWKHRELVKIIVKRKSFPQVKHIATSLEAESGGVLVSVDKTVKGYA 979
            RR ++DGTIENMHLHWK+RELVKIIVK KSF QVK IA SLEAESGGVLVS+DKT KG A
Sbjct: 686  RRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIA 745

Query: 978  IIIYRGKNYQRPSTFRPKNLLTKRQALARAIELQRREALKHHISELQEKIEKLKSELEDM 799
            II+YRGKNY RP   RP+NLL +RQALAR++ELQRRE LKHHI +L+E+IE +KSELE++
Sbjct: 746  IIVYRGKNYVRPLKLRPQNLLNRRQALARSVELQRREGLKHHILDLEERIELVKSELEEI 805

Query: 798  K 796
            +
Sbjct: 806  E 806


>ref|XP_006451488.1| hypothetical protein CICLE_v10007477mg [Citrus clementina]
            gi|557554714|gb|ESR64728.1| hypothetical protein
            CICLE_v10007477mg [Citrus clementina]
          Length = 810

 Score =  786 bits (2030), Expect = 0.0
 Identities = 441/841 (52%), Positives = 560/841 (66%), Gaps = 23/841 (2%)
 Frame = -2

Query: 3249 KFLPTPSPYPSSQSLFFLIYQPQLSSANSFRNLRLKISCSSQTIE--IGTQENSHTKKRR 3076
            K+ P   P     ++ +L  +PQ   +NSFR++R+ I  S  TI+  +GT     T+ +R
Sbjct: 10   KYSPLTQP-----AVHYLPLKPQSQCSNSFRSIRIGICFSHLTIQAQLGT-----TRTKR 59

Query: 3075 KPRPSFLDRIQEKWSTKTTSSRETFPWXXXXXXXXXXXXXXXXESSGVIVAETDSRKCSE 2896
            K +PSF ++I+ KWS K  S RE FPW                        ETD  +   
Sbjct: 60   KVKPSFFEQIRHKWSHKVISPREKFPWQEEEEEEEEVQNE----------PETDV-ESRV 108

Query: 2895 LSETASFSSIEKVNLPPWTHGNKHRKSQF-------VSEARNLDRSNVVPHFNRS----- 2752
             SE  S +   +    PW HG   ++ +F        ++  ++    ++  F ++     
Sbjct: 109  RSEPFSSALPNRFVSAPWIHGTDSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTVVHSA 168

Query: 2751 ---------GERLDFDEEIGEKGVEYDSIPIGLSKKGQTSVLEEDKRDKSNNSAVEMFQE 2599
                      +  D+++E+    V+ D+ PI LSK     V         N   ++ + E
Sbjct: 169  VKEKTVIELDKEGDYNKELKTDEVKIDANPIELSKDRHREV------GSLNQKQIKGYHE 222

Query: 2598 FNSVKGFNDSTRRPWERENKRESVDRKRVRRGNADLAEKVIPEPELKRLRNVALRMVERI 2419
                   +D +  PW+R   R        RR N +LAEK+IPE EL+RLRN++LRM+ER 
Sbjct: 223  ------VDDPSVLPWKRNTDRR-------RRSNTELAEKMIPEHELQRLRNISLRMLERT 269

Query: 2418 KVGAAGVTQGLVDSIQEKWKVDEVVKLKFEGPPSMNMRRTHEILESRTGGMVIWRSGSSI 2239
            KVG+AG+TQ LVDSI EKWK+DEVVKLKFE P S+ M+RTHEILE RTGG+VIWRSGSS+
Sbjct: 270  KVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSV 329

Query: 2238 VLYRGTAYKLDCVQAYNKETQKSATTIESSSGALANDINQSIGVKYFNGAAESSRTDSSK 2059
            VL+RG AYKL CVQ++ K      T        + N++ +++G      A ES   DS+ 
Sbjct: 330  VLFRGMAYKLPCVQSFTKHNHTQQTQ------DVTNEVMRNVGEHPPRSAMESYVPDSAN 383

Query: 2058 QIYNLSRXXXXXXXXXXXXXXXLGPRFKDWSGREPLPVDADLLPAVVPGYRRPFRLLPHG 1879
             + NLS+               LGPRFKDW GREPLPVDADLLP VVP Y+ P RLLP+G
Sbjct: 384  NLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYG 443

Query: 1878 VRQGLRDKEMTYFRRTARQMPPHFALGRNRELQGLALVMVKLWERSAIAKIAIKRGVQNT 1699
            ++ GLRD E T FRR AR+ PPHFALGRNRELQGLA  MVKLWE+SAIAKIAIKR V NT
Sbjct: 444  IKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNT 503

Query: 1698 CNERMAEELKVLTGGTLLSRNKEYIVFYRGNDFLPSGVSKALIEKERLSALQQDEEEKAR 1519
             NERMAEELK LTGGTLL RNK+YIVFYRGNDFLP  V+ A+ E+ +L+ ++QDEEE+AR
Sbjct: 504  RNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEEQAR 563

Query: 1518 LGAVALIESNTKATKGTLVAGTLSETKAATSHWGNQPSSEDLEKMMKESAVARHASLVEF 1339
              A ALIE   K   G+LVAGTL+ET AATS WG QPS ED+EKMM++S ++RHASL+ +
Sbjct: 564  HVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRY 623

Query: 1338 LEKKLAIAKGKIANAEKALKKVQGKLEPAELPTDLETLSDEERFLFRKIGLSMKTYLLLG 1159
            LE+KLA+AK K+  A+KAL KVQ  L+PAELP+DLET+++EERFL RK+GLSMK YLLLG
Sbjct: 624  LEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLG 683

Query: 1158 RREVFDGTIENMHLHWKHRELVKIIVKRKSFPQVKHIATSLEAESGGVLVSVDKTVKGYA 979
            RR ++DGTIENMHLHWK+RELVKIIVK KSF QVK IA SLEAESGGVLVS+DKT KG A
Sbjct: 684  RRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIA 743

Query: 978  IIIYRGKNYQRPSTFRPKNLLTKRQALARAIELQRREALKHHISELQEKIEKLKSELEDM 799
            II+YRGKNY RP   RP+NLL +RQALAR++ELQRRE LKHHI +L+E+IE +KSELE++
Sbjct: 744  IIVYRGKNYVRPLKLRPQNLLNRRQALARSVELQRREGLKHHILDLEERIELVKSELEEI 803

Query: 798  K 796
            +
Sbjct: 804  E 804


>ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like, partial [Cucumis sativus]
          Length = 789

 Score =  783 bits (2023), Expect = 0.0
 Identities = 416/783 (53%), Positives = 537/783 (68%), Gaps = 19/783 (2%)
 Frame = -2

Query: 3087 KKRRKPRPSFLDRIQEKWSTKTTSSRETFPWXXXXXXXXXXXXXXXXESSGVIVAETDSR 2908
            KK+RKPRPSFL++I+ KWSTK  SS  TFPW                E       E  + 
Sbjct: 15   KKKRKPRPSFLEQIRHKWSTKPISSTHTFPWQQQEQDRHHKQDEGEGEEEEEEEEEQVAN 74

Query: 2907 KCS-----ELSETASFSSIEKVNLPPWTHGNKHRKSQFVSEAR--------NLDRSNVVP 2767
            + S       ++      I +    PW HG++ R +QF  + +         + + +   
Sbjct: 75   QTSVSIPESTTDVTQAVPITRSISAPWAHGSQSRNTQFDFKPKTPNGEVINEISKISTDD 134

Query: 2766 HFNRSGERLDFDE---EIGEKGVEYDSIPIGLSKKGQT---SVLEEDKRDKSNNSAVEMF 2605
              NR+   +  DE   +  E   E D++ + +++K  T    ++     D  +N  V++ 
Sbjct: 135  TSNRNASTISIDEISDDSSEDEAEIDTVVLPVTEKRSTLSKKIVHSVSSDNDDNGRVDL- 193

Query: 2604 QEFNSVKGFNDSTRRPWERENKRESVDRKRVRRGNADLAEKVIPEPELKRLRNVALRMVE 2425
                           PW+RE +R+S      RR    LAE+++PE EL+RLRN++LRMVE
Sbjct: 194  ---------------PWKREPRRDSEVDAGQRRSKTLLAEQMLPEHELRRLRNISLRMVE 238

Query: 2424 RIKVGAAGVTQGLVDSIQEKWKVDEVVKLKFEGPPSMNMRRTHEILESRTGGMVIWRSGS 2245
            RI+VG  G+TQ L+DSI EKWKVDEVVKLKFEGP ++NM+R HE LE+RTGG+VIWRSGS
Sbjct: 239  RIEVGVKGITQELLDSIHEKWKVDEVVKLKFEGPLTVNMKRAHEKLENRTGGLVIWRSGS 298

Query: 2244 SIVLYRGTAYKLDCVQAYNKETQKSATTIESSSGALANDINQSIGVKYFNGAAESSRTDS 2065
             IVLYRG  Y L CVQ+Y K+ Q  + T++  +   ++DI ++  +    G   +  + +
Sbjct: 299  LIVLYRGMTYHLPCVQSYAKQNQAKSNTLDVPNNVESDDITRNEKLHTTVGTMSTIVSGA 358

Query: 2064 SKQIYNLSRXXXXXXXXXXXXXXXLGPRFKDWSGREPLPVDADLLPAVVPGYRRPFRLLP 1885
            SK    LS+               +GPRFKDWSG EP+PVDADLLP +VPGY+ P R+LP
Sbjct: 359  SKHTKTLSKKELMELSDLNHLLDEIGPRFKDWSGCEPVPVDADLLPGIVPGYKPPTRILP 418

Query: 1884 HGVRQGLRDKEMTYFRRTARQMPPHFALGRNRELQGLALVMVKLWERSAIAKIAIKRGVQ 1705
            +GVR  LR+KE+T FRR AR+MPPHFALGRNR+LQGLA  MVKLWE+ AIAKIAIKRGV+
Sbjct: 419  YGVRHCLRNKEVTIFRRLARKMPPHFALGRNRQLQGLANAMVKLWEKCAIAKIAIKRGVE 478

Query: 1704 NTCNERMAEELKVLTGGTLLSRNKEYIVFYRGNDFLPSGVSKALIEKERLSALQQDEEEK 1525
            NT NERMAEEL++LTGGTLLSRNKEYIVFYRGND+LP  +++AL E+ +L+  QQD EE+
Sbjct: 479  NTRNERMAEELRILTGGTLLSRNKEYIVFYRGNDYLPPTITEALKERRKLADRQQDVEEQ 538

Query: 1524 ARLGAVALIESNTKATKGTLVAGTLSETKAATSHWGNQPSSEDLEKMMKESAVARHASLV 1345
             R  A A IES  KA+   LVAGTL+ET AATS WG+QPS  D+E M ++SA+A+  SL+
Sbjct: 539  VRQVASAAIESKVKASNAPLVAGTLTETIAATSRWGSQPSGHDIENMREDSALAKLDSLI 598

Query: 1344 EFLEKKLAIAKGKIANAEKALKKVQGKLEPAELPTDLETLSDEERFLFRKIGLSMKTYLL 1165
            E+L+KKLA+AK K+ NAEK + K+Q K EP++LPTDLET++DEER LFRKIGLSMK YLL
Sbjct: 599  EYLKKKLALAKCKVKNAEKIIAKLQEKKEPSDLPTDLETITDEERLLFRKIGLSMKPYLL 658

Query: 1164 LGRREVFDGTIENMHLHWKHRELVKIIVKRKSFPQVKHIATSLEAESGGVLVSVDKTVKG 985
            LGRR V+DGT+ENMHLHWK RELVKIIV+ K+  QVKH+A SLEAES GV++S+DKT KG
Sbjct: 659  LGRRGVYDGTVENMHLHWKFRELVKIIVRGKTLQQVKHVAISLEAESNGVVISLDKTTKG 718

Query: 984  YAIIIYRGKNYQRPSTFRPKNLLTKRQALARAIELQRREALKHHISELQEKIEKLKSELE 805
            Y +I+YRGKNY RP   RPKN+LT+RQALAR+IELQRREALKHHI +L+EKIE LK+ELE
Sbjct: 719  YEVIVYRGKNYTRPDAMRPKNMLTRRQALARSIELQRREALKHHILDLEEKIELLKAELE 778

Query: 804  DMK 796
            + K
Sbjct: 779  ERK 781


>ref|XP_006475470.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Citrus sinensis]
          Length = 803

 Score =  783 bits (2022), Expect = 0.0
 Identities = 440/838 (52%), Positives = 557/838 (66%), Gaps = 23/838 (2%)
 Frame = -2

Query: 3249 KFLPTPSPYPSSQSLFFLIYQPQLSSANSFRNLRLKISCSSQTIE--IGTQENSHTKKRR 3076
            K+ P   P     ++ +L  +PQ   +NSFR++R+ I  S  TI+  +GT     T+ +R
Sbjct: 12   KYSPLTQP-----AVHYLPLKPQSQCSNSFRSIRIGICFSHLTIQAQLGT-----TRTKR 61

Query: 3075 KPRPSFLDRIQEKWSTKTTSSRETFPWXXXXXXXXXXXXXXXXESSGVIVAETDSRKCSE 2896
            K +PSF ++I+ KWS K  S RE FPW                        ETD  +   
Sbjct: 62   KVKPSFFEQIRHKWSHKVISPREKFPWQEEEEEEEEVQNE----------PETDV-ESRV 110

Query: 2895 LSETASFSSIEKVNLPPWTHGNKHRKSQF-------VSEARNLDRSNVVPHFNRS----- 2752
             SE  S +   +    PW HG   ++ +F        ++  ++    ++  F ++     
Sbjct: 111  RSEPFSSALPNRFVSAPWIHGTDSKEIKFDSPQTKITTKKEDIGDDGLLGSFEKTVVHSA 170

Query: 2751 ---------GERLDFDEEIGEKGVEYDSIPIGLSKKGQTSVLEEDKRDKSNNSAVEMFQE 2599
                      +  D+++E+    V+ D+ PI LSK     V         N   ++ + E
Sbjct: 171  VKEKTVIELDKEGDYNKELKTDEVKIDANPIELSKDRHREV------GSLNQKQIKGYHE 224

Query: 2598 FNSVKGFNDSTRRPWERENKRESVDRKRVRRGNADLAEKVIPEPELKRLRNVALRMVERI 2419
                   +D +  PW+R   R        RR N +LAEK+IPE EL+RLRN++LRM+ER 
Sbjct: 225  ------VDDPSVLPWKRNTDRR-------RRSNTELAEKMIPEHELQRLRNISLRMLERT 271

Query: 2418 KVGAAGVTQGLVDSIQEKWKVDEVVKLKFEGPPSMNMRRTHEILESRTGGMVIWRSGSSI 2239
            KVG+AG+TQ LVDSI EKWK+DEVVKLKFE P S+ M+RTHEILE RTGG+VIWRSGSS+
Sbjct: 272  KVGSAGITQALVDSIHEKWKLDEVVKLKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSV 331

Query: 2238 VLYRGTAYKLDCVQAYNKETQKSATTIESSSGALANDINQSIGVKYFNGAAESSRTDSSK 2059
            VL+RG AYKL CVQ++ K      T        + N++ +++G      A ES   DS+ 
Sbjct: 332  VLFRGMAYKLPCVQSFTKHNHTQQTQ------DVTNEVMRNVGEHPPRSAMESYVPDSAN 385

Query: 2058 QIYNLSRXXXXXXXXXXXXXXXLGPRFKDWSGREPLPVDADLLPAVVPGYRRPFRLLPHG 1879
             + NLS+               LGPRFKDW GREPLPVDADLLP VVP Y+ P RLLP+G
Sbjct: 386  NLENLSKEELMDLCELNYLLDELGPRFKDWPGREPLPVDADLLPPVVPDYKPPLRLLPYG 445

Query: 1878 VRQGLRDKEMTYFRRTARQMPPHFALGRNRELQGLALVMVKLWERSAIAKIAIKRGVQNT 1699
            ++ GLRD E T FRR AR+ PPHFALGRNRELQGLA  MVKLWE+SAIAKIAIKR V NT
Sbjct: 446  IKPGLRDCETTEFRRLARKTPPHFALGRNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNT 505

Query: 1698 CNERMAEELKVLTGGTLLSRNKEYIVFYRGNDFLPSGVSKALIEKERLSALQQDEEEKAR 1519
             NERMAEELK LTGGTLL RNK+YIVFYRGNDFLP  V+ A+ E+ +L+ ++QDEEE+AR
Sbjct: 506  RNERMAEELKKLTGGTLLCRNKDYIVFYRGNDFLPPVVTDAVKERSKLTDIRQDEEEQAR 565

Query: 1518 LGAVALIESNTKATKGTLVAGTLSETKAATSHWGNQPSSEDLEKMMKESAVARHASLVEF 1339
              A ALIE   K   G+LVAGTL+ET AATS WG QPS ED+EKMM++S ++RHASL+ +
Sbjct: 566  HVASALIELKAKGFVGSLVAGTLAETLAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRY 625

Query: 1338 LEKKLAIAKGKIANAEKALKKVQGKLEPAELPTDLETLSDEERFLFRKIGLSMKTYLLLG 1159
            LE+KLA+AK K+  A+KAL KVQ  L+PAELP+DLET+++EERFL RK+GLSMK YLLLG
Sbjct: 626  LEQKLALAKRKLKMADKALAKVQESLDPAELPSDLETITNEERFLLRKMGLSMKPYLLLG 685

Query: 1158 RREVFDGTIENMHLHWKHRELVKIIVKRKSFPQVKHIATSLEAESGGVLVSVDKTVKGYA 979
            RR ++DGTIENMHLHWK+RELVKIIVK KSF QVK IA SLEAESGGVLVS+DKT KG A
Sbjct: 686  RRGIYDGTIENMHLHWKYRELVKIIVKGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIA 745

Query: 978  IIIYRGKNYQRPSTFRPKNLLTKRQALARAIELQRREALKHHISELQEKIEKLKSELE 805
            II+YRGKNY RP   RP+NLL +RQALAR++ELQRRE LKHHI +L+E+IE +KSEL+
Sbjct: 746  IIVYRGKNYVRPLKLRPQNLLNRRQALARSVELQRREGLKHHILDLEERIELVKSELK 803


>ref|XP_002309217.2| hypothetical protein POPTR_0006s15340g [Populus trichocarpa]
            gi|550336383|gb|EEE92740.2| hypothetical protein
            POPTR_0006s15340g [Populus trichocarpa]
          Length = 977

 Score =  771 bits (1990), Expect = 0.0
 Identities = 408/644 (63%), Positives = 486/644 (75%), Gaps = 2/644 (0%)
 Frame = -2

Query: 2682 LSKKGQTSVLEEDKRDKSNNSAVEMFQEFNSVKGFNDSTRRPWERENKRESVDRKRVRR- 2506
            LS K    V+   K+   +   VE+     S  G ++S   PW+R +  +S+   + R+ 
Sbjct: 300  LSCKDSNDVVSVSKKQLGDFENVEV-----SNNGVSNSNELPWKRTSGLDSLGEDKSRKK 354

Query: 2505 GNADLAEKVIPEPELKRLRNVALRMVERIKVGAAGVTQGLVDSIQEKWKVDEVVKLKFEG 2326
             N DLAE+++PE ELKRLRNVALRM+ERIKVGA G+TQ LVD+I EKWK+DEVVKLKFE 
Sbjct: 355  SNTDLAERMLPEHELKRLRNVALRMLERIKVGATGITQDLVDAIHEKWKLDEVVKLKFEW 414

Query: 2325 PPSMNMRRTHEILESRTGGMVIWRSGSSIVLYRGTAYKLDCVQAYNKETQKSATTIESSS 2146
            P S NM+RTHEILESRTGG++IWRSGSS+V+YRGT YK  CVQ+Y K+ +     ++ + 
Sbjct: 415  PLSCNMKRTHEILESRTGGLIIWRSGSSVVMYRGTTYKFQCVQSYTKQNEAGMDVLQYAE 474

Query: 2145 GALANDINQSIGVKYFNGAAESSRTDSSKQIYNLSRXXXXXXXXXXXXXXXLGPRFKDWS 1966
             A  N    S G+K      ES   D++K + +LS+               LGPR+KDW 
Sbjct: 475  EA-TNSATSSAGMKDLARTMESIIPDAAKYLKDLSQEELMDFSELNHLLDELGPRYKDWC 533

Query: 1965 GREPLPVDADLLPAVVPGYRRPFRLLPHGVRQGLRDKEMTYFRRTARQMPPHFALGRNRE 1786
            GREPLPVDADLLPAVVPGY+ P RLLP+GV+  L +K  T FRR AR  PPHF LGRNRE
Sbjct: 534  GREPLPVDADLLPAVVPGYKSPLRLLPYGVKPCLSNKNTTNFRRLARTTPPHFVLGRNRE 593

Query: 1785 LQGLALVMVKLWERSAIAKIAIKRGVQNTCNERMAEELKVLTGGTLLSRNKEYIVFYRGN 1606
            LQGLA  MVKLWERSAIAKIAIKRGVQ T NE MAEELK LTGGTLLSRNKEYIVFYRGN
Sbjct: 594  LQGLANAMVKLWERSAIAKIAIKRGVQYTRNEIMAEELKRLTGGTLLSRNKEYIVFYRGN 653

Query: 1605 DFLPSGVSKALIEKERLSALQQDEEEKARLGAVALIESNTKATKGTLVAGTLSETKAATS 1426
            DFLP  +++ L E+ +L+ L QDEE++AR    A I S+ K TKG LVAGTL ET AA S
Sbjct: 654  DFLPPVINETLKERRKLAFLYQDEEDQARQMTSAFIGSSVKTTKGPLVAGTLVETVAAIS 713

Query: 1425 HWGNQPSSEDLEKMMKESAVARHASLVEFLEKKLAIAKGKIANAEKALKKVQGKLEPAEL 1246
             WGNQPSSED+E+M+++SA+ARHASLV+ LE KLA AKGK+  +EK L KVQ  LEP EL
Sbjct: 714  RWGNQPSSEDVEEMIRDSALARHASLVKHLENKLAQAKGKLKKSEKDLAKVQENLEPTEL 773

Query: 1245 PTDLETLSDEERFLFRKIGLSMKTYLLLGRREVFDGTIENMHLHWKHRELVKIIVKRKSF 1066
            PTDLET+SDEERFLFRKIGLSMK YL LGRR VFDGTIENMHLHWK+RELVKIIV+RK  
Sbjct: 774  PTDLETISDEERFLFRKIGLSMKPYLFLGRRGVFDGTIENMHLHWKYRELVKIIVERKGI 833

Query: 1065 PQVKHIATSLEAESGGVLVSVDKTVKGYAIIIYRGKNYQRPSTFRPKNLLTKRQALARAI 886
             QVKHIA SLEAESGGVLVSVD+T KGYAII+YRGKNY RP   RP+NLLT+RQALAR++
Sbjct: 834  AQVKHIAISLEAESGGVLVSVDRTTKGYAIIVYRGKNYMRPQAMRPENLLTRRQALARSV 893

Query: 885  ELQRREALKHHISELQEKIEKLKSELEDMKIVKEID-EKTIYSR 757
            ELQR EALKHHI++LQE+IE + SELE+M+  K+ +  K +YS+
Sbjct: 894  ELQRYEALKHHITDLQERIELVTSELEEMEADKKSEVYKALYSK 937



 Score = 69.7 bits (169), Expect = 8e-09
 Identities = 63/246 (25%), Positives = 104/246 (42%), Gaps = 15/246 (6%)
 Frame = -2

Query: 3210 SLFFLIYQPQLSSANSFRNLRLKISC-SSQTIEIGTQENSHTKKRRKPRPSFLDRIQEKW 3034
            SL  L+ QPQ  S  +F+       C S++T+++        K +RKP+PSF ++I  KW
Sbjct: 11   SLNPLLLQPQNPSPITFK---FTTYCPSNRTVQVHA-----AKSKRKPKPSFFEQIHHKW 62

Query: 3033 STKTTSSRETFPWXXXXXXXXXXXXXXXXESSGVIVAETDSRKCSELSETASFSSIEKVN 2854
            S K TS+R+ FPW                E    I  E D+     +S+T SF+   ++ 
Sbjct: 63   SLKLTSTRDKFPWQEQEQQQQQQQEEEEEEEEEDI-KEVDA--VPSVSDTVSFNLPNRLT 119

Query: 2853 LPPWTHGNKHRKSQFVSEARNLDRS--------------NVVPHFNRSGERLDFDEEIGE 2716
             PPW HG   +++ F  + R  D S               V+    R  + ++ D    E
Sbjct: 120  TPPWIHGATPKQAHFDYQPRKGDNSIHGVFENREDNVVNGVIDKEERIEKEVNLDNNFKE 179

Query: 2715 KGVEYDSIPIGLSKKGQTSVLEEDKRDKSNNSAVEMFQEFNSVKGFNDSTRRPWERENKR 2536
            + V++D            SV +  +  +  + +V  + E        + +R      NK+
Sbjct: 180  QVVDFD----------DASVFQLPEAKEIKDCSVHRYAENREEDNAEEDSRED-NVANKK 228

Query: 2535 ESVDRK 2518
            ESV +K
Sbjct: 229  ESVGKK 234


>ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 933

 Score =  742 bits (1916), Expect(2) = 0.0
 Identities = 419/757 (55%), Positives = 515/757 (68%), Gaps = 41/757 (5%)
 Frame = -2

Query: 2901 SELSETASFSSIEKVNLPPWTHGNKHRKSQFVSEARNLDRSNVVP-----HFNRSG---- 2749
            S++  T  FS +E        +G   R    VS   + +R  +V       F+R+G    
Sbjct: 159  SDIDATKEFSKVENFREEFDGNGKLDRDVDEVSVGFSKERKTMVSKKFEQEFDRNGKLER 218

Query: 2748 -----------ERLDFDEEIGEKGVEY---------DSIPIGLSKKGQTSVLEE------ 2647
                       E  + ++ I  K  E+         D I +G+S K +T V E       
Sbjct: 219  EIDEVFVGVSKEENEVEKMITSKSFEHRKGILEGRIDRISVGVSVKEETVVSERLIGAAV 278

Query: 2646 ---DKRDKSNNSAVEMFQEFNSVKGFNDSTRRPWERENK--RESVDRKRVRRGNADLAEK 2482
                  D  N+  V  F   +S      S R PWERE +   E   + R +  N   AE 
Sbjct: 279  DETVSGDSENDENVVTF--VSSGSDSRASARLPWEREGELVNEEGGKTRKKWSNTLSAET 336

Query: 2481 VIPEPELKRLRNVALRMVERIKVGAAGVTQGLVDSIQEKWKVDEVVKLKFEGPPSMNMRR 2302
             +P+ ELKRLRNV+LRM+ER KVGAAG+TQ LVD+I EKWKVDEVVKLKFE P S+NMRR
Sbjct: 337  SLPDHELKRLRNVSLRMLERTKVGAAGITQSLVDAIHEKWKVDEVVKLKFEEPLSLNMRR 396

Query: 2301 THEILESRTGGMVIWRSGSSIVLYRGTAYKLDCVQAYNKETQKSATTIESSSGALANDIN 2122
            TH ILES+TGG+VIWRSGSS+VLYRG +Y L CV++Y K+ Q  +  ++     +  D  
Sbjct: 397  THGILESKTGGLVIWRSGSSVVLYRGISYNLQCVKSYTKQRQTGSHMLQDLEDTVRRD-- 454

Query: 2121 QSIGVKYFNGAAESSRTDSSKQIYNLSRXXXXXXXXXXXXXXXLGPRFKDWSGREPLPVD 1942
                     G     +  S K++  LS                LGPRFKDW GREPLPVD
Sbjct: 455  ---------GTHNYMKDLSKKELMELS--------DLNHLLDELGPRFKDWIGREPLPVD 497

Query: 1941 ADLLPAVVPGYRRPFRLLPHGVRQGLRDKEMTYFRRTARQMPPHFALGRNRELQGLALVM 1762
            ADLLPAVVPGY+ PFRLLP+GVR GL+DK+MT FRR AR  PPHFALGR++ELQGLA  M
Sbjct: 498  ADLLPAVVPGYQTPFRLLPYGVRPGLKDKDMTKFRRLARAAPPHFALGRSKELQGLAKAM 557

Query: 1761 VKLWERSAIAKIAIKRGVQNTCNERMAEELKVLTGGTLLSRNKEYIVFYRGNDFLPSGVS 1582
            VKLWE+ AIAKIAIKRGVQNT NERMAEELK LTGGTLLSRNK++IVFYRGNDFLP  V+
Sbjct: 558  VKLWEKCAIAKIAIKRGVQNTRNERMAEELKRLTGGTLLSRNKDFIVFYRGNDFLPPVVT 617

Query: 1581 KALIEKERLSALQQDEEEKARLGAVALIESNTKATKGTLVAGTLSETKAATSHWGNQPSS 1402
              L E+  +  LQQDEEEKAR      IES ++A+ G LVAGTL+ET AAT+ W  Q + 
Sbjct: 618  GVLKERREMRELQQDEEEKARQMTSDYIESRSEASNGQLVAGTLAETIAATARWIKQLTI 677

Query: 1401 EDLEKMMKESAVARHASLVEFLEKKLAIAKGKIANAEKALKKVQGKLEPAELPTDLETLS 1222
            ED++KM ++S + + ASLV +LEKKLA+AKGK+  AEKAL KVQ  L+PA+LP DLE L+
Sbjct: 678  EDVDKMTRDSNLEKRASLVRYLEKKLALAKGKLKKAEKALAKVQENLDPADLPDDLEILT 737

Query: 1221 DEERFLFRKIGLSMKTYLLLGRREVFDGTIENMHLHWKHRELVKIIVKRKSFPQVKHIAT 1042
            DE+RFLFRKIGLSMK +LLLGRREV+ GTIENMHLHWKHRELVKIIV+ K+F QVKHIA 
Sbjct: 738  DEDRFLFRKIGLSMKPFLLLGRREVYSGTIENMHLHWKHRELVKIIVRGKNFKQVKHIAI 797

Query: 1041 SLEAESGGVLVSVDKTVKGYAIIIYRGKNYQRPSTFRPKNLLTKRQALARAIELQRREAL 862
            SLEAESGG+LVS+DKT KGYAII+YRGKNYQ P   RP+NLLT+RQALAR+IELQRRE L
Sbjct: 798  SLEAESGGLLVSLDKTTKGYAIILYRGKNYQCPLPLRPRNLLTRRQALARSIELQRREGL 857

Query: 861  KHHISELQEKIEKLKSELEDMKIVKEIDE-KTIYSRI 754
            KHH+S+LQE+IE LK+ELE+M+  + +D+ +T++S +
Sbjct: 858  KHHLSDLQERIELLKTELEEMENGRMVDDGRTLHSSL 894



 Score = 23.9 bits (50), Expect(2) = 0.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 722 KRDESEEVYLETYLTDAED 666
           + DE EE YLE Y +  ED
Sbjct: 904 EEDEGEEAYLEVYDSGNED 922



 Score = 71.6 bits (174), Expect = 2e-09
 Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 13/216 (6%)
 Frame = -2

Query: 3219 SSQSLFFLIYQPQLSSANSFRNLRLKISCSSQTIEIGTQENSHTKKRRKPRPSFLDRIQE 3040
            SS S  F   Q  L S  + R  R ++SC +  I++  +    TKK+RKP+PSF  +IQ+
Sbjct: 7    SSSSFSFNAPQCFLPSYRTCRAHRFRVSCKTVEIKVDIEP---TKKKRKPKPSFYQQIQD 63

Query: 3039 KWSTKTTSSRETFPWXXXXXXXXXXXXXXXXESSGVIVAETDSRKCSELSETASFSSIEK 2860
            KWS K  S R  FPW                E       +++ R    + +  SFS    
Sbjct: 64   KWSMKVDSPRHKFPWQNQEESEDEEEDEEEKEEGE--SQQSEVRVFKPVDQEMSFSMPNP 121

Query: 2859 VNLPPWTHGNKHRKSQFVSEARNLDRSNVVPHFNRSGERLDFDEEI-------------G 2719
            V   PW +  K  K+Q  S    +D  + +   + +   +D  +E              G
Sbjct: 122  VKYAPWANRTKPIKTQVGSIKPEVDYEHEIYKPSVANSDIDATKEFSKVENFREEFDGNG 181

Query: 2718 EKGVEYDSIPIGLSKKGQTSVLEEDKRDKSNNSAVE 2611
            +   + D + +G SK+ +T V ++ +++   N  +E
Sbjct: 182  KLDRDVDEVSVGFSKERKTMVSKKFEQEFDRNGKLE 217


>ref|XP_004507937.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Cicer arietinum]
          Length = 768

 Score =  738 bits (1904), Expect = 0.0
 Identities = 392/657 (59%), Positives = 483/657 (73%), Gaps = 23/657 (3%)
 Frame = -2

Query: 2655 LEEDKRDKSNNSAVEMFQEF-----------NSVKGFNDSTRRPWERE-----------N 2542
            LEE  + + N S+  +  EF           NS K   D   +P ++             
Sbjct: 94   LEEQPQSQENESSTNLNFEFPKRLPPWHVPENSRKPKFDENEKPLQKSFSGSVTEEREVQ 153

Query: 2541 KRESVDRKRVRRGNADLAEKVIPEPELKRLRNVALRMVERIKVGAAGVTQGLVDSIQEKW 2362
            + ES    + RR NA+LAE++IPE EL+RLRN+ALRMVER  VG AG+TQ LVDSI EKW
Sbjct: 154  ESESRSDLKKRRSNAELAERLIPEHELRRLRNIALRMVERFNVGVAGITQELVDSIHEKW 213

Query: 2361 KVDEVVKLKFEGPPSMNMRRTHEILESRTGGMVIWRSGSSIVLYRGTAYKLDCVQAYNKE 2182
             VDEVVK KF+ P S NM+R H+ILES+TGG+V+WRSGSSIVLYRG  YKL CV+ Y K 
Sbjct: 214  LVDEVVKFKFDSPLSANMKRAHQILESKTGGIVVWRSGSSIVLYRGMTYKLPCVELYTKV 273

Query: 2181 TQKSATTIESSSGALANDINQSIGVKYFNGAAESSRTDSSKQIYNLSRXXXXXXXXXXXX 2002
                   ++ S   + +  N  + V+   G  ES   ++++ + ++S             
Sbjct: 274  NDIKENAVDHSVH-VGSGSNAQVSVQEMVGPIESFNRNAAEYLKDMSEEELMELIELNHL 332

Query: 2001 XXXLGPRFKDWSGREPLPVDADLLPAVVPGYRRPFRLLPHGVRQGLRDKEMTYFRRTARQ 1822
               LGPRFKDW+GREPLPVDAD+LPA+VPGY+ PFRLLP+GV+  L +KEMT  RR AR+
Sbjct: 333  LDELGPRFKDWTGREPLPVDADMLPALVPGYKTPFRLLPYGVKPCLSNKEMTVIRRIARR 392

Query: 1821 MPPHFALGRNRELQGLALVMVKLWERSAIAKIAIKRGVQNTCNERMAEELKVLTGGTLLS 1642
              PHFALGRNRELQGLA  +VKLWE SAIAKIAIKRGV  TCN+RMAEELK LTGGTL+S
Sbjct: 393  TAPHFALGRNRELQGLARAIVKLWETSAIAKIAIKRGVPYTCNDRMAEELKKLTGGTLVS 452

Query: 1641 RNKEYIVFYRGNDFLPSGVSKALIEKERLSALQQDEEEKARLGAVALIESNTKATKGTLV 1462
            RNKEYIVFYRGNDFLP  V+  L E+++L+ LQQDEEEKAR  A+++  SN K+++  L+
Sbjct: 453  RNKEYIVFYRGNDFLPPTVTNTLTERQKLTVLQQDEEEKARQNALSITISNRKSSQMPLL 512

Query: 1461 AGTLSETKAATSHWGNQPSSEDLEKMMKESAVARHASLVEFLEKKLAIAKGKIANAEKAL 1282
            AGTL+ET+AAT++WG+QPS ++ EKMM+ES + R +SL+   EKKLA+AK +   AEK L
Sbjct: 513  AGTLAETRAATTNWGHQPSKQEAEKMMRESTLDRLSSLIRNHEKKLALAKARFKKAEKDL 572

Query: 1281 KKVQGKLEPAELPTDLETLSDEERFLFRKIGLSMKTYLLLGRREVFDGTIENMHLHWKHR 1102
             K+QG L+PA+LP+DLETL++EERFLFRKIGLSMK YLLLGRR+V+ GTIENMHLHWK+R
Sbjct: 573  AKIQGDLDPADLPSDLETLTNEERFLFRKIGLSMKPYLLLGRRDVYAGTIENMHLHWKYR 632

Query: 1101 ELVKIIVKRKSFPQVKHIATSLEAESGGVLVSVDKTVKGYAIIIYRGKNYQRPSTFRPKN 922
            E+VKIIVK K+  QVKHIA SLEAESGGVLVSVDK  KGY II+YRGKNY RP   RPK+
Sbjct: 633  EVVKIIVKGKNLAQVKHIAISLEAESGGVLVSVDKDTKGYIIILYRGKNYFRPQVTRPKS 692

Query: 921  LLTKRQALARAIELQRREALKHHISELQEKIEKLKSELEDMKIVKEID-EKTIYSRI 754
            LLT+RQALAR+IELQRREALK+HIS+LQE IE LKSELED K  K  D +KT+YS +
Sbjct: 693  LLTRRQALARSIELQRREALKYHISDLQEMIELLKSELEDKKNEKVNDGDKTMYSTL 749


>ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 794

 Score =  736 bits (1899), Expect = 0.0
 Identities = 421/828 (50%), Positives = 539/828 (65%), Gaps = 9/828 (1%)
 Frame = -2

Query: 3174 SANSFRNLRLKISCSSQTIEIGTQEN---SHTKKRRKPRPSFLDRIQEKWSTKTTSSRET 3004
            S +S   L+ ++SCS+QT ++ T +    ++  K    RPSFL +IQ+KWS K  S RE 
Sbjct: 17   SYSSLHFLKFRVSCSNQTSQLDTPQRVKVANKTKNSSHRPSFLHQIQDKWSLKLGSQREK 76

Query: 3003 FPWXXXXXXXXXXXXXXXXESSGVIVAETDSRKCSELSETASFSSIEKVNLP----PWTH 2836
            FPW                      + E    K  E  +     S      P    PW  
Sbjct: 77   FPWQEQKHEVEQQQQ----------IEEEKEEKKREQFQNQKKPSASNFQFPKRVSPWAQ 126

Query: 2835 GNKHRKSQFVSEARNLDRSNVVPHFNRSGERLDFDEEIGEKGVEYDSIPIGLSKKGQTSV 2656
                  +   SE+ +              E  + +E++  K ++++SI          SV
Sbjct: 127  AINPSSALLDSESDD-------------SEDEEDNEDVKGKALQHNSIG---------SV 164

Query: 2655 LEEDKRDKSNNSAVEMFQEFNSVKGFNDSTRRPWERENKRESVDRKRVRRGNADLAEKVI 2476
             EE K   S  S+                       E +R + +RK+ RR N +LAE+ I
Sbjct: 165  REERKGMASEVSS----------------------NEAERVNGERKK-RRSNTELAERTI 201

Query: 2475 PEPELKRLRNVALRMVERIKVGAAGVTQGLVDSIQEKWKVDEVVKLKFEGPPSMNMRRTH 2296
            PE EL+RLR +ALRM+ER  VG  G+TQ LV S+ +KW+  EVVK KF  P S +M++ H
Sbjct: 202  PEHELRRLRKIALRMMERFDVGVKGITQELVASVHQKWRDAEVVKFKFGIPLSAHMKKAH 261

Query: 2295 EILESRTGGMVIWRSGSSIVLYRGTAYKLDCVQAYNKETQKSATTIESSSGALANDINQS 2116
            +ILES+ GG+VIWRSGSSIVLYRG AYKL C++ Y K        ++ S   + N  +  
Sbjct: 262  QILESKIGGIVIWRSGSSIVLYRGMAYKLPCIENYKKVNLAKENAVDHSLH-VGNGSDGQ 320

Query: 2115 IGVKYFNGAAESSRTDSSKQIYNLSRXXXXXXXXXXXXXXXLGPRFKDWSGREPLPVDAD 1936
              V    G AES   +S++ + ++S                LGPRFKDW+GR+PLPVDAD
Sbjct: 321  ASVNETVGTAESVIQESAEYLKDMSEEELMEMCDLNHLLDELGPRFKDWTGRQPLPVDAD 380

Query: 1935 LLPAVVPGYRRPFRLLPHGVRQGLRDKEMTYFRRTARQMPPHFALGRNRELQGLALVMVK 1756
            LLPAVVPGY+ PFRLLP+ +R  L +KEMT FRR AR   PHFALGRNRELQGLA  MVK
Sbjct: 381  LLPAVVPGYKTPFRLLPYRIRPCLTNKEMTNFRRLARTTAPHFALGRNRELQGLARAMVK 440

Query: 1755 LWERSAIAKIAIKRGVQNTCNERMAEELKVLTGGTLLSRNKEYIVFYRGNDFLPSGVSKA 1576
            LWE SAIAKIAIKRGV NTCN+RMAEEL+ LTGGTLLSRNKEYIVFYRGNDFLP  V+  
Sbjct: 441  LWETSAIAKIAIKRGVPNTCNDRMAEELRKLTGGTLLSRNKEYIVFYRGNDFLPPVVTNT 500

Query: 1575 LIEKERLSALQQDEEEKARLGAVALIESNTKATKGTLVAGTLSETKAATSHWGNQPSSED 1396
            L E+++L+ LQQDEE+KAR  A ++  SN+KA +  L+AGTL+ET+AAT++WG+QPS ++
Sbjct: 501  LNERQKLTLLQQDEEDKARQIASSITVSNSKAAQVPLIAGTLTETRAATTNWGHQPSKQE 560

Query: 1395 LEKMMKESAVARHASLVEFLEKKLAIAKGKIANAEKALKKVQGKLEPAELPTDLETLSDE 1216
            +E M+++SA+ + ++LV+  EKKLA+AK K   AEKAL KVQ  L+PA++P+DLETL++E
Sbjct: 561  IENMIRDSAMNKLSALVKHHEKKLALAKSKFRKAEKALAKVQRDLDPADIPSDLETLTNE 620

Query: 1215 ERFLFRKIGLSMKTYLLLGRREVFDGTIENMHLHWKHRELVKIIVKRKSFPQVKHIATSL 1036
            ERFLFRKIGLSMK YLLLGRR+V+ GTIENMHLHWK+RELVK+IVK ++  QVKHI+ SL
Sbjct: 621  ERFLFRKIGLSMKPYLLLGRRDVYAGTIENMHLHWKYRELVKLIVKGRNSAQVKHISISL 680

Query: 1035 EAESGGVLVSVDKTVKG-YAIIIYRGKNYQRPSTFRPKNLLTKRQALARAIELQRREALK 859
            EAESGGVLVSVDK  +G + II+YRGKNY  P   RPKNLLT+RQALAR++ELQRREALK
Sbjct: 681  EAESGGVLVSVDKDTRGHHTIIVYRGKNYFSPRVVRPKNLLTRRQALARSVELQRREALK 740

Query: 858  HHISELQEKIEKLKSELEDMKIVKEI-DEKTIYSRIXXXXXXXXDLKE 718
            HHIS+L+E+I  LKSELEDMK  KEI D KT+Y  +        DL+E
Sbjct: 741  HHISDLEERIGLLKSELEDMKNGKEIEDSKTLYPALENPVSSDDDLEE 788


>ref|XP_004956664.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Setaria italica]
          Length = 963

 Score =  704 bits (1817), Expect(2) = 0.0
 Identities = 365/602 (60%), Positives = 449/602 (74%), Gaps = 7/602 (1%)
 Frame = -2

Query: 2559 PWERENKRESV--DRKRVRRGNADLAEKVIPEPELKRLRNVALRMVERIKVGAAGVTQGL 2386
            PWERE + + V    K  RR N +LAE+ IPE EL+RLR+ ALRM ERIKVG+ GVTQ +
Sbjct: 327  PWEREEEDDEVFGGGKAGRRSNTELAERTIPENELRRLRDAALRMKERIKVGSGGVTQDI 386

Query: 2385 VDSIQEKWKVDEVVKLKFEGPPSMNMRRTHEILESRTGGMVIWRSGSSIVLYRGTAYKLD 2206
            V+SI  KWKVDEVVK++FEGPPS+NM+RTH++LE RTGG+VIWRSG S+VLYRG  Y L 
Sbjct: 387  VESIHRKWKVDEVVKMRFEGPPSLNMKRTHDLLEDRTGGIVIWRSGRSVVLYRGMNYNLQ 446

Query: 2205 CVQAYNKETQ-KSATTIESSSGALANDIN----QSIGVKYFNGAAESSRTDSSKQIYNLS 2041
            CVQ+Y K TQ  S   +  ++ A+    N    ++ GVK+   +   S    + + +++ 
Sbjct: 447  CVQSYAKSTQIDSDKEVADANSAIHGRHNLQKSRADGVKHSTSSGNFSLELEATEAFDID 506

Query: 2040 RXXXXXXXXXXXXXXXLGPRFKDWSGREPLPVDADLLPAVVPGYRRPFRLLPHGVRQGLR 1861
                             GPR+KDWSGR P+PVDADLLP VVPGY++P+R+LP+ ++  LR
Sbjct: 507  SFLDQL-----------GPRYKDWSGRSPIPVDADLLPGVVPGYKQPYRVLPYKIKSTLR 555

Query: 1860 DKEMTYFRRTARQMPPHFALGRNRELQGLALVMVKLWERSAIAKIAIKRGVQNTCNERMA 1681
            DKEMT  RR ARQ  PHFALGRNRE QGLA  MVKLWE+SAIAKIAIKRGV NTCN+RMA
Sbjct: 556  DKEMTALRRLARQTAPHFALGRNREHQGLAAAMVKLWEKSAIAKIAIKRGVPNTCNDRMA 615

Query: 1680 EELKVLTGGTLLSRNKEYIVFYRGNDFLPSGVSKALIEKERLSALQQDEEEKARLGAVAL 1501
            EE+K LTGG LLSRNKEYI+FYRGNDF+   V + L+EK+  +  Q DEEE ARL A A 
Sbjct: 616  EEIKKLTGGVLLSRNKEYIIFYRGNDFIAPKVRQVLVEKQEQAITQLDEEELARLKASAS 675

Query: 1500 IESNTKATKGTLVAGTLSETKAATSHWGNQPSSEDLEKMMKESAVARHASLVEFLEKKLA 1321
            I +     KG LVAGTL+ET  A S WG+  + +  E+ MK  A+ +HASL++ L++KL 
Sbjct: 676  ITTIPNELKGPLVAGTLAETTEAKSRWGHSLNDKQREEEMKYLALMKHASLLKSLKRKLI 735

Query: 1320 IAKGKIANAEKALKKVQGKLEPAELPTDLETLSDEERFLFRKIGLSMKTYLLLGRREVFD 1141
            +AK KIA AE+AL KVQ  L PAELPTDLET++DEERFLFR+IGL M+ +L+LGRR+VFD
Sbjct: 736  LAKTKIAKAERALAKVQQFLSPAELPTDLETVTDEERFLFRRIGLKMRAFLMLGRRDVFD 795

Query: 1140 GTIENMHLHWKHRELVKIIVKRKSFPQVKHIATSLEAESGGVLVSVDKTVKGYAIIIYRG 961
            GT++NMHLHWKHREL+KIIV+ KSF QVKHIA SLEAES GVL+SVDKT KGYAII YRG
Sbjct: 796  GTVQNMHLHWKHRELIKIIVRGKSFAQVKHIAISLEAESEGVLISVDKTTKGYAIIFYRG 855

Query: 960  KNYQRPSTFRPKNLLTKRQALARAIELQRREALKHHISELQEKIEKLKSELEDMKIVKEI 781
            KNY+RP   +P+NLLT+RQALAR+IELQRREALKHHIS LQ KI KL ++L  MK   E 
Sbjct: 856  KNYRRPQIVKPRNLLTRRQALARSIELQRREALKHHISSLQGKIWKLNTQLVQMKEAMEK 915

Query: 780  DE 775
            ++
Sbjct: 916  ED 917



 Score = 26.6 bits (57), Expect(2) = 0.0
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 716 DESEEVYLETYLTDAED 666
           DE EE YL+TY +D E+
Sbjct: 937 DEGEEAYLQTYSSDEEE 953